View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11910_high_7 (Length: 338)
Name: NF11910_high_7
Description: NF11910
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11910_high_7 |
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Alignment Details
Target: chr4 (Bit Score: 233; Significance: 1e-129; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 19 - 251
Target Start/End: Complemental strand, 31394266 - 31394034
Alignment:
| Q |
19 |
caatgctactccaccatcacctcaatcatcatcacctccttcaccagcaccttctaaccaagagggtcaatctccacctccagacacgaaccaaacacca |
118 |
Q |
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| T |
31394266 |
caatgctactccaccatcacctcaatcatcatcacctccttcaccagcaccttctaaccaagagggtcaatctccacctccagacacgaaccaaacacca |
31394167 |
T |
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| Q |
119 |
cctcctactgctactagtgatcatgatcatcctcctcgtaatggcgctgcttcaaactttgtcagtctagctggctctgttggaactttcatggcttcag |
218 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31394166 |
cctcctactgctactagtgatcatgatcatcctcctcgtaatggcgctgcttcaaactttgtcagtctagctggctctgttggaactttcatggcttcag |
31394067 |
T |
|
| Q |
219 |
ctctaattttatccaagtatctatgagtgcttg |
251 |
Q |
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||||||||||||||||||||||||||||||||| |
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| T |
31394066 |
ctctaattttatccaagtatctatgagtgcttg |
31394034 |
T |
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