View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF11912_low_6 (Length: 338)
Name: NF11912_low_6
Description: NF11912
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11912_low_6 |
 |  |
|
| [»] scaffold0352 (1 HSPs) |
 |  |  |
|
| [»] scaffold0182 (1 HSPs) |
 |  |  |
|
| [»] scaffold0045 (1 HSPs) |
 |  |  |
|
| [»] scaffold0002 (2 HSPs) |
 |  |  |
|
| [»] scaffold0054 (2 HSPs) |
 |  |  |
|
| [»] scaffold0012 (1 HSPs) |
 |  |  |
|
| [»] scaffold0057 (1 HSPs) |
 |  |  |
|
| [»] scaffold0008 (1 HSPs) |
 |  |  |
|
| [»] scaffold1050 (1 HSPs) |
 |  |  |
|
| [»] scaffold2020 (1 HSPs) |
 |  |  |
|
| [»] scaffold0009 (1 HSPs) |
 |  |  |
|
| [»] scaffold0128 (1 HSPs) |
 |  |  |
|
| [»] scaffold0184 (1 HSPs) |
 |  |  |
|
| [»] scaffold0097 (1 HSPs) |
 |  |  |
|
| [»] scaffold0011 (1 HSPs) |
 |  |  |
|
| [»] scaffold0240 (3 HSPs) |
 |  |  |
|
| [»] scaffold0015 (1 HSPs) |
 |  |  |
|
| [»] scaffold0132 (2 HSPs) |
 |  |  |
|
| [»] scaffold0690 (1 HSPs) |
 |  |  |
|
| [»] scaffold0061 (1 HSPs) |
 |  |  |
|
| [»] scaffold0060 (2 HSPs) |
 |  |  |
|
| [»] scaffold0020 (1 HSPs) |
 |  |  |
|
| [»] scaffold0017 (1 HSPs) |
 |  |  |
|
Alignment Details
Target: chr6 (Bit Score: 213; Significance: 1e-117; HSPs: 37)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 1 - 322
Target Start/End: Complemental strand, 20748468 - 20748143
Alignment:
| Q |
1 |
ctgtttgtttttggaattctaaattgttgtattttggtttttcaaattctattttaaaagagaatatctatcgaagttgttactagattgagtcaagacc |
100 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||| |||||||||| ||||||||||||| |||||||| |||| |
|
|
| T |
20748468 |
ctgtttgtttttggatttctaaattgttgtattttggttttccaaattctattttaaaagataatatctatcaaagttgttactaggttgagtcacgacc |
20748369 |
T |
 |
| Q |
101 |
aggtcgtcctctttaatacgtttcgtgacactg----aaattgtataaggccgactatcaaccacgccgcctccaggataaaacaagttcagctacaact |
196 |
Q |
| |
|
|||||| ||||||||| | ||||| || |||| ||||||| |||||||||||||||||||||||||||||| ||||||||||| || |||||||| |
|
|
| T |
20748368 |
aggtcgccctctttaacatgtttcatggtactgtccaaaattgtgcaaggccgactatcaaccacgccgcctccagaataaaacaagtccatctacaact |
20748269 |
T |
 |
| Q |
197 |
gtgcggttaactactgcactgtagaaaaccgttcgagaattacaccttcaatatggtactaagaccactcttttaatactgaaaccactccaatatggta |
296 |
Q |
| |
|
||||||||||||||||||| ||||||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||| |||| |||||||||||||| |
|
|
| T |
20748268 |
gtgcggttaactactgcaccgtagaaaacggttcgagaattacaccttaaatatggtactaaaaccactcttttaatactaaaactactccaatatggta |
20748169 |
T |
 |
| Q |
297 |
ctaagaccactcaaataagatgttac |
322 |
Q |
| |
|
|||| ||||||||||||||||||||| |
|
|
| T |
20748168 |
ctaacaccactcaaataagatgttac |
20748143 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 26 - 283
Target Start/End: Complemental strand, 24589324 - 24589062
Alignment:
| Q |
26 |
gttgtattttggtttttcaaattctatttta-aaagagaatatctatcgaagttgttactagattgagtcaagaccaggtcgtcctctttaatacgtttc |
124 |
Q |
| |
|
|||||||||||||||| |||||||||||| |||||||| |||||||||||||||||||| |||||||| || ||| ||| |||||||| ||||||| |
|
|
| T |
24589324 |
gttgtattttggttttcgaaattctattttctaaagagaacatctatcgaagttgttactaagttgagtcacgatcagatcgctctctttaaaacgtttc |
24589225 |
T |
 |
| Q |
125 |
gtgacactg----aaattgtataaggccgactatcaaccacgccgcctccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtag |
220 |
Q |
| |
|
|||||||| ||||||| ||| ||||||||||||||||| |||||||||||||||||| || |||||||||||||||||||||||||| ||||| |
|
|
| T |
24589224 |
gtgacactttccaaaattgtgcaagatagactatcaaccacgccgtctccaggataaaacaagtccaactacaactgtgcggttaactactgcattgtag |
24589125 |
T |
 |
| Q |
221 |
aaaaccgttcgagaattacaccttcaatatggtactaagaccactcttttaatactgaaacca |
283 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
24589124 |
aaaaccgttcgagaattacaccttcaatatggtactaagaccactcttttaatactgaaacca |
24589062 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 65 - 283
Target Start/End: Original strand, 8747757 - 8747979
Alignment:
| Q |
65 |
tatctatcgaagttgttactagattgagtcaagaccaggtcgtcctctttaatacgtttcgtgacactg----aaattgtataaggccgactatcaacca |
160 |
Q |
| |
|
||||||| |||||||||||||| |||||||| |||||||||| |||||||| ||||| |||||||||| ||||||| ||| | | |||||||| | |
|
|
| T |
8747757 |
tatctattgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgttccgtgacactgcccaaaattgtgcaagacaggctatcaacaa |
8747856 |
T |
 |
| Q |
161 |
cgccgcctccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccttcaatatggtactaaga |
260 |
Q |
| |
|
||||||||||||||||||||||| |||||| ||||| || |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
8747857 |
cgccgcctccaggataaaacaagctcagctgcaactatgtggttaactactgcactgtagaaaaccgttcgaaaattacaccttcaatatggtactaaga |
8747956 |
T |
 |
| Q |
261 |
ccactcttttaatactgaaacca |
283 |
Q |
| |
|
||||||||||| ||||||||||| |
|
|
| T |
8747957 |
ccactcttttattactgaaacca |
8747979 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 65 - 296
Target Start/End: Complemental strand, 6407980 - 6407746
Alignment:
| Q |
65 |
tatctatcgaagttgttactagattgagtcaagaccaggtcgtcctctttaatacgtttcgtgacactg----aaattgtataaggccgactatcaacca |
160 |
Q |
| |
|
|||||| ||||||||||||||| |||||||| || ||||||| ||||| || |||||||||| ||||| |||||||| || || |||||||||||| |
|
|
| T |
6407980 |
tatctaccgaagttgttactaggttgagtcacgatcaggtcgctctcttgaagacgtttcgtggcactgcccaaaattgtacaaagcagactatcaacca |
6407881 |
T |
 |
| Q |
161 |
cgccgcctccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccttc-aatatggtactaag |
259 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||| | |||||||||||||| |
|
|
| T |
6407880 |
cgccgcctccaggataaaacaagctcagctacaactgtgcggttaactact-cactgtagaaaaccgttcaagaattacacctccaaatatggtactaag |
6407782 |
T |
 |
| Q |
260 |
accactcttttaatactgaaaccactccaatatggta |
296 |
Q |
| |
|
||||||| |||||||||||||||||| ||||||||| |
|
|
| T |
6407781 |
accactc-tttaatactgaaaccactttaatatggta |
6407746 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 65 - 296
Target Start/End: Complemental strand, 11570869 - 11570634
Alignment:
| Q |
65 |
tatctatcgaagttgttactagattgagtcaagaccaggtcgtcctctttaatacgtttcgtgacactg----aaattgtataaggccgactatcaacca |
160 |
Q |
| |
|
|||||| ||||||||||||||| |||||||| ||||||||| |||||||| |||||||||| ||||| ||||||| ||||| ||| |||||||| |
|
|
| T |
11570869 |
tatctaccgaagttgttactaggttgagtcacaaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattgtgcaaggcagacaatcaacca |
11570770 |
T |
 |
| Q |
161 |
cgccgcctccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccttc-aatatggtactaag |
259 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||||||||| ||||||| | |||||||||||||||| ||||||| ||| || |||||||||||||| |
|
|
| T |
11570769 |
cgccgcctccaggataaaacaagctcagctacaactgtgcggtgaactactccgctgtagaaaaccgttccagaattataccctcaaatatggtactaag |
11570670 |
T |
 |
| Q |
260 |
accactcttttaatactgaaaccactccaatatggta |
296 |
Q |
| |
|
||||||| |||||||||||||||||| ||||||||| |
|
|
| T |
11570669 |
accactc-tttaatactgaaaccactttaatatggta |
11570634 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 134 - 285
Target Start/End: Complemental strand, 17964606 - 17964455
Alignment:
| Q |
134 |
aaattgtataaggccgactatcaaccacgccgcctccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgag |
233 |
Q |
| |
|
||||||| ||||| ||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
17964606 |
aaattgtgcaaggcagactatcaaccacgccgcctccaggataaaacaagcccagctgcaactgtgcggttaactactgcactgtagaaaaccgttcgag |
17964507 |
T |
 |
| Q |
234 |
aattacaccttc-aatatggtactaagaccactcttttaatactgaaaccact |
285 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
17964506 |
aattacaccttcaaatatggtactaagaccactc-tttaatactgaaaccact |
17964455 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 72 - 285
Target Start/End: Original strand, 12688953 - 12689170
Alignment:
| Q |
72 |
cgaagttgttactagattgagtcaagaccaggtcgtcctctttaatacgtttcgtgacactg----aaattgtataaggccgactatcaaccacgccgcc |
167 |
Q |
| |
|
||||||||||||||| |||||||| ||||||||| |||||||| |||||| |||| |||| ||||||| ||||| ||||||||||||||||| | |
|
|
| T |
12688953 |
cgaagttgttactaggttgagtcatgaccaggtcactctctttaagacgttttgtgatactgcccaaaattgtgcaaggcagactatcaaccacgccgtc |
12689052 |
T |
 |
| Q |
168 |
tccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccttcaa-tatggtactaagaccactc |
266 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||| |||| ||||||| |||||| |||| |
|
|
| T |
12689053 |
tccaggataaaacaagctcagctacaactgtgcggttaactactacactgtagaaaaccgttcgacaattacaccctcaattatggtattaagacgactc |
12689152 |
T |
 |
| Q |
267 |
ttttaatactgaaaccact |
285 |
Q |
| |
|
||||||| |||||||||| |
|
|
| T |
12689153 |
-tttaatattgaaaccact |
12689170 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 110 - 284
Target Start/End: Complemental strand, 16836231 - 16836053
Alignment:
| Q |
110 |
tctttaatacgtttcgtgacactg----aaattgtataaggccgactatcaaccacgccgcctccaggataaaacaagttcagctacaactgtgcggtta |
205 |
Q |
| |
|
||||||| |||||||||| ||||| |||||||| ||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
16836231 |
tctttaagacgtttcgtggcactgcccaaaattgtacaaggcagactatcaaccacgccgcctccaggataaaacaagcccagctacaactgtgcggtta |
16836132 |
T |
 |
| Q |
206 |
actactgcactgtagaaaaccgttcgagaattacaccttca-atatggtactaagaccactcttttaatactgaaaccac |
284 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| ||| || ||||||||||||||||| ||||||||||||||||| |
|
|
| T |
16836131 |
gttactgcactgtagaaaaccgttcgagaattacaccctcatatttggtactaagaccactc-tttaatactgaaaccac |
16836053 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 65 - 296
Target Start/End: Complemental strand, 2700226 - 2699992
Alignment:
| Q |
65 |
tatctatcgaagttgttactagattgagtcaagaccaggtcgtcctctttaatacgtttcgtgacactg----aaattgtataaggccgactatcaacca |
160 |
Q |
| |
|
|||||| ||||||||||||||| |||||||| |||||| ||| |||||||| |||||||||| ||||| ||||||| ||| | |||||||||||| |
|
|
| T |
2700226 |
tatctaccgaagttgttactaggttgagtcacgaccagatcgctctctttaagacgtttcgtggcactgttcaaaattgtgcaagacagactatcaacca |
2700127 |
T |
 |
| Q |
161 |
cgccgcctccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccttc-aatatggtactaag |
259 |
Q |
| |
|
|||||| |||||||||||||||| || |||||||||| || |||||||||||||||||||||| || ||||||||||||||| | |||||||||||||| |
|
|
| T |
2700126 |
cgccgcttccaggataaaacaagcccaactacaactgttcgattaactactgcactgtagaaaatcg-tcgagaattacacctccaaatatggtactaag |
2700028 |
T |
 |
| Q |
260 |
accactcttttaatactgaaaccactccaatatggta |
296 |
Q |
| |
|
| ||||| |||||||||||||||||| ||||||||| |
|
|
| T |
2700027 |
atcactc-tttaatactgaaaccactttaatatggta |
2699992 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 152 - 298
Target Start/End: Original strand, 14509050 - 14509196
Alignment:
| Q |
152 |
tatcaaccacgccgcctccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccttcaatatg |
251 |
Q |
| |
|
||||||||||||||| |||| ||||||||||| ||| |||||||||| || |||||||||||| ||||||||| |||||||||||||||||| ||||||| |
|
|
| T |
14509050 |
tatcaaccacgccgcttccaagataaaacaagctcatctacaactgttcgattaactactgcattgtagaaaatcgttcgagaattacacctccaatatg |
14509149 |
T |
 |
| Q |
252 |
gtactaagaccactcttttaatactgaaaccactccaatatggtact |
298 |
Q |
| |
|
|||| ||||||| ||||||||||||||||||||| ||||||||||| |
|
|
| T |
14509150 |
gtaccaagaccattcttttaatactgaaaccactttaatatggtact |
14509196 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 157 - 296
Target Start/End: Complemental strand, 11534735 - 11534596
Alignment:
| Q |
157 |
accacgccgcctccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccttc-aatatggtac |
255 |
Q |
| |
|
||||||||||||||||||||||||||| ||| ||||||||||||||| |||||||||| ||||||||||||||| ||||||||||| || |||||||||| |
|
|
| T |
11534735 |
accacgccgcctccaggataaaacaagctcaactacaactgtgcggtgaactactgcattgtagaaaaccgttccagaattacaccctcaaatatggtac |
11534636 |
T |
 |
| Q |
256 |
taagaccactcttttaatactgaaaccactccaatatggta |
296 |
Q |
| |
|
||||||||||| ||||||| |||||||||| ||||||||| |
|
|
| T |
11534635 |
taagaccactc-tttaatattgaaaccactttaatatggta |
11534596 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 157 - 296
Target Start/End: Complemental strand, 11560245 - 11560106
Alignment:
| Q |
157 |
accacgccgcctccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccttc-aatatggtac |
255 |
Q |
| |
|
||||||||||||||||||||||||||| ||| ||||||||||||||| |||||||||| ||||||||||||||| ||||||||||| || |||||||||| |
|
|
| T |
11560245 |
accacgccgcctccaggataaaacaagctcaactacaactgtgcggtgaactactgcattgtagaaaaccgttccagaattacaccctcaaatatggtac |
11560146 |
T |
 |
| Q |
256 |
taagaccactcttttaatactgaaaccactccaatatggta |
296 |
Q |
| |
|
||||||||||| ||||||| |||||||||| ||||||||| |
|
|
| T |
11560145 |
taagaccactc-tttaatattgaaaccactttaatatggta |
11560106 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 61 - 280
Target Start/End: Complemental strand, 29892385 - 29892162
Alignment:
| Q |
61 |
agaatatctatcgaagttgttactagattgagtcaagaccaggtcgtcctctttaatacgtttcgtgacactg----aaattgtataaggccgactatca |
156 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||| | ||||||| |||||||| | |||| ||| ||||| ||||||| ||| | ||||||| |
|
|
| T |
29892385 |
agaatatctatcgaagttgttactaggttgagtcacggtcaggtcgctctctttaagaagtttggtggcactgcccaaaattgtgcaagacaaactatca |
29892286 |
T |
 |
| Q |
157 |
accacgccgcctccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccttc-aatatggtac |
255 |
Q |
| |
|
||||| || ||||||||||||||||||| |||||||||||||| ||||||||| |||| ||||||||||| ||||| | ||||||| || |||||||||| |
|
|
| T |
29892285 |
accacacctcctccaggataaaacaagtccagctacaactgtgtggttaactattgcattgtagaaaacctttcgatatttacaccctcaaatatggtac |
29892186 |
T |
 |
| Q |
256 |
taagaccactcttttaatactgaaa |
280 |
Q |
| |
|
||||| ||||| ||||||||||||| |
|
|
| T |
29892185 |
taagatcactc-tttaatactgaaa |
29892162 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 65 - 285
Target Start/End: Complemental strand, 33687723 - 33687499
Alignment:
| Q |
65 |
tatctatcgaagttgttactagattgagtcaagaccaggtcgtcctctttaatacgtttcgtgacactg----aaattgtataaggccgactatcaacca |
160 |
Q |
| |
|
|||||| |||| |||||| ||| |||||| | ||||||||| |||||||| |||||||||| ||||| ||||||| ||| | |||||||||||| |
|
|
| T |
33687723 |
tatctaccgaaattgttattaggttgagttaccaccaggtcgctctctttaagacgtttcgtggcactggccaaaattgtgcaagacagactatcaacca |
33687624 |
T |
 |
| Q |
161 |
cgccgcctccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccttc-aatatggtactaag |
259 |
Q |
| |
|
|||| |||||||||||||||| ||| |||||||||||||||||||||||||| ||||||||| | ||||||| ||||||| || ||||||||||||| |
|
|
| T |
33687623 |
tgccgtctccaggataaaacaaactcaactacaactgtgcggttaactactgcattgtagaaaatccttcgagatttacaccctcaaatatggtactaaa |
33687524 |
T |
 |
| Q |
260 |
accactcttttaatactgaaaccact |
285 |
Q |
| |
|
||||||| ||||||| |||||||||| |
|
|
| T |
33687523 |
accactc-tttaatattgaaaccact |
33687499 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 33 - 234
Target Start/End: Complemental strand, 11614244 - 11614039
Alignment:
| Q |
33 |
tttggtttttcaaattctattttaaaagagaatatctatcgaagttgttactagattgagtcaagaccaggtcgtcctctttaatacgtttcgtgacact |
132 |
Q |
| |
|
||||| |||| ||||||| |||| ||| |||||||||||||||||||||||||| |||||||| || |||| || |||||||| |||||| || |||| |
|
|
| T |
11614244 |
tttggatttttaaattcttttttgaaaaagaatatctatcgaagttgttactaggttgagtcacgatgaggttgttctctttaaaacgttttatggcact |
11614145 |
T |
 |
| Q |
133 |
g----aaattgtataaggccgactatcaaccacgccgcctccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgt |
228 |
Q |
| |
|
| ||||||| ||||| ||||||||||||||||||||||||||||||||||| || ||||| |||||||||||||| |||||| |||||||| || |
|
|
| T |
11614144 |
gctcaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaacaagcacaattacaattgtgcggttaactaatgcactttagaaaactgt |
11614045 |
T |
 |
| Q |
229 |
tcgaga |
234 |
Q |
| |
|
| |||| |
|
|
| T |
11614044 |
ttgaga |
11614039 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 5 - 296
Target Start/End: Complemental strand, 12406530 - 12406238
Alignment:
| Q |
5 |
ttgtttttggaattctaaattgttgtattttggtttttcaaattctattttaaaagagaatatctatcgaagttgttactagattgagtcaagaccaggt |
104 |
Q |
| |
|
||||||||||| || ||| |||||||||| || ||||||| || | |||| ||||| |||| || |||||||||||||||||||||||| |||||||| |
|
|
| T |
12406530 |
ttgtttttggattttcaaactgttgtattt-ggattttcaatttttttttttaaaga--atatataccgaagttgttactagattgagtcacgaccaggt |
12406434 |
T |
 |
| Q |
105 |
cgtcctctttaatacgtttcgtgacactg----aaattgtataaggccgactatcaaccacgccgcctccaggataaaacaagttcagctacaactgtgc |
200 |
Q |
| |
|
|| ||||| || |||||||||| || || || |||| |||| ||||||||| |||||||||| || ||||||||| | ||| ||||||||||| |
|
|
| T |
12406433 |
cgctctcttaaagacgtttcgtggcagtgcctaaagttgtgcaaggaagactatcaatcacgccgccttcatgataaaacatgctcaactacaactgtgt |
12406334 |
T |
 |
| Q |
201 |
ggttaactactgcactgtagaaaaccgttcgagaattacaccttc-aatatggtactaagaccactcttttaatactgaaaccactccaatatggta |
296 |
Q |
| |
|
||||||||||||||| |||||||||||| |||| ||| ||| || |||||| |||||| | |||| ||||||||||||||||||| ||||||||| |
|
|
| T |
12406333 |
ggttaactactgcaccgtagaaaaccgtgagagatttataccctcaaatatgatactaaaatcact-ttttaatactgaaaccactttaatatggta |
12406238 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 65 - 215
Target Start/End: Original strand, 21309006 - 21309160
Alignment:
| Q |
65 |
tatctatcgaagttgttactagattgagtcaagaccaggtcgtcctctttaatacgtttcgtgacactg----aaattgtataaggccgactatcaacca |
160 |
Q |
| |
|
|||||||||||||||||||||| |||||||| |||| ||| |||||||| ||||||| || ||||| ||||||| || || |||||||||||| |
|
|
| T |
21309006 |
tatctatcgaagttgttactaggttgagtcactaccatatcgctctctttaagacgtttcatggcactgcccaaaattgtgcaatgcagactatcaacca |
21309105 |
T |
 |
| Q |
161 |
cgccgcctccaggataaaacaagttcagctacaactgtgcggttaactactgcac |
215 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
21309106 |
cgccgcctccaggataaaacaagctcagctacaactgtgcggttaactactgcac |
21309160 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #18
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 154 - 308
Target Start/End: Complemental strand, 15991767 - 15991611
Alignment:
| Q |
154 |
tcaaccacgccgcctccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccttc-aatat-g |
251 |
Q |
| |
|
||||||| |||||||| |||||||||||||||||||| ||| ||||| ||||||||||||||||| |||||||||| ||||||||||| || ||||| | |
|
|
| T |
15991767 |
tcaaccaagccgcctctaggataaaacaagttcagctgcaattgtgcagttaactactgcactgtcgaaaaccgtttgagaattacacaatcaaatatgg |
15991668 |
T |
 |
| Q |
252 |
gtactaagaccactcttttaatactgaaaccactccaatatggtactaagaccactc |
308 |
Q |
| |
|
||| ||| |||||||||||| |||||||||| || | |||||||||| |||||||| |
|
|
| T |
15991667 |
gtattaatgccactcttttaaaactgaaaccaatcaattatggtactatgaccactc |
15991611 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #19
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 154 - 308
Target Start/End: Complemental strand, 15999429 - 15999273
Alignment:
| Q |
154 |
tcaaccacgccgcctccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccttc-aatat-g |
251 |
Q |
| |
|
||||||| |||||||| |||||||||||||||||||| ||| ||||| ||||||||||||||||| |||||||||| ||||||||||| || ||||| | |
|
|
| T |
15999429 |
tcaaccaagccgcctctaggataaaacaagttcagctgcaattgtgcagttaactactgcactgtcgaaaaccgtttgagaattacacaatcaaatatgg |
15999330 |
T |
 |
| Q |
252 |
gtactaagaccactcttttaatactgaaaccactccaatatggtactaagaccactc |
308 |
Q |
| |
|
||| ||| |||||||||||| |||||||||| || | |||||||||| |||||||| |
|
|
| T |
15999329 |
gtattaatgccactcttttaaaactgaaaccaatcaattatggtactatgaccactc |
15999273 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #20
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 150 - 308
Target Start/End: Complemental strand, 9751839 - 9751681
Alignment:
| Q |
150 |
actatcaaccacgccgcctccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccttcaata |
249 |
Q |
| |
|
|||||||| |||| || || ||||||||| |||| | |||||| |||||| |||||||||||||||||||| ||| |||||||||||||||| ||||| |
|
|
| T |
9751839 |
actatcaatcacgtcgtctgtaggataaaataagtctaactacaattgtgcgattaactactgcactgtagaacaccattcgagaattacacctccaata |
9751740 |
T |
 |
| Q |
250 |
tggtactaagaccactcttttaatactgaaaccactccaatatggtactaagaccactc |
308 |
Q |
| |
|
||| |||||||||||| |||||||| ||||||| || | |||||||||| |||||||| |
|
|
| T |
9751739 |
tggcactaagaccactattttaatagcgaaaccaatcaattatggtactatgaccactc |
9751681 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #21
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 33 - 243
Target Start/End: Complemental strand, 13736831 - 13736616
Alignment:
| Q |
33 |
tttggtttttcaaattct-attttaaaagagaatatctatcgaagttgttactagattgagtcaagaccaggtcgtcctctttaatacgtttcgtgacac |
131 |
Q |
| |
|
||||| ||| |||||||| ||||| ||| ||||||| || ||||||||||||||| ||||||| |||||||| ||||||| |||||||||| ||| |
|
|
| T |
13736831 |
tttggatttccaaattcttattttgaaaaagaatatttaccgaagttgttactaggttgagtcgccaccaggtccctctctttacgacgtttcgtggcac |
13736732 |
T |
 |
| Q |
132 |
tg----aaattgtataaggccgactatcaaccacgccgcctccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccg |
227 |
Q |
| |
|
|| ||||||| |||| ||||| ||||||| | ||||||||||||||||||| || |||||| |||||| |||||||||||||||||||||| | |
|
|
| T |
13736731 |
tgcctaaaattgtgcaaggaagactaccaaccacactgcctccaggataaaacaagcacatctacaaatgtgcgaataactactgcactgtagaaaactg |
13736632 |
T |
 |
| Q |
228 |
ttcgagaattacacct |
243 |
Q |
| |
|
||||||| |||||||| |
|
|
| T |
13736631 |
ttcgagatttacacct |
13736616 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #22
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 150 - 268
Target Start/End: Original strand, 22609632 - 22609750
Alignment:
| Q |
150 |
actatcaaccacgccgcctccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccttcaata |
249 |
Q |
| |
|
||||||| ||||||||||||||||||||||||| ||| ||||||||| | | ||||| ||||||| ||||||||| |||||||||||||||| ||||| |
|
|
| T |
22609632 |
actatcagtcacgccgcctccaggataaaacaagctcaactacaactgcgtgattaacaactgcacggtagaaaactattcgagaattacacctccaata |
22609731 |
T |
 |
| Q |
250 |
tggtactaagaccactctt |
268 |
Q |
| |
|
||||| || |||||||||| |
|
|
| T |
22609732 |
tggtaatatgaccactctt |
22609750 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #23
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 65 - 247
Target Start/End: Complemental strand, 25316686 - 25316498
Alignment:
| Q |
65 |
tatctatcgaagttgttactagattgagtcaagaccaggtcgtcctctttaatacgtttcgtgacactg----aaattgtataaggccgactatcaacca |
160 |
Q |
| |
|
|||||| |||| |||||||||||||||||| |||||||||| | ||||| |||||| ||| ||||| ||||||| || || ||||| ||||| |
|
|
| T |
25316686 |
tatctaccgaaattgttactagattgagtcgcgaccaggtcgctcaatttaagacgttttgtggcactgcccaaaattgtgcaaagcaaactatgaacca |
25316587 |
T |
 |
| Q |
161 |
cgccgcc---tccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccttcaa |
247 |
Q |
| |
|
||||||| |||||||||||||||||||| ||||||| ||||||||||||| ||||||||||||||| ||||||||||| |||| |||| |
|
|
| T |
25316586 |
cgccgccgtctccaggataaaacaagttcatctacaaccgtgcggttaacta-tgcactgtagaaaactgttcgagaattgcaccctcaa |
25316498 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #24
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 65 - 247
Target Start/End: Complemental strand, 26204180 - 26203992
Alignment:
| Q |
65 |
tatctatcgaagttgttactagattgagtcaagaccaggtcgtcctctttaatacgtttcgtgacactg----aaattgtataaggccgactatcaacca |
160 |
Q |
| |
|
|||||| |||| |||||||||||||||||| |||||||||| | ||||| |||||| ||| ||||| ||||||| || || ||||| ||||| |
|
|
| T |
26204180 |
tatctaccgaaattgttactagattgagtcgcgaccaggtcgctcaatttaagacgttttgtggcactgcccaaaattgtgcaaagcaaactatgaacca |
26204081 |
T |
 |
| Q |
161 |
cgccgcc---tccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccttcaa |
247 |
Q |
| |
|
||||||| |||||||||||||||||||| ||||||| ||||||||||||| ||||||||||||||| ||||||||||| |||| |||| |
|
|
| T |
26204080 |
cgccgccgtctccaggataaaacaagttcatctacaaccgtgcggttaacta-tgcactgtagaaaactgttcgagaattgcaccctcaa |
26203992 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #25
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 154 - 285
Target Start/End: Complemental strand, 4157396 - 4157265
Alignment:
| Q |
154 |
tcaaccacgccgcctccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattaca-ccttcaatatgg |
252 |
Q |
| |
|
|||||||| | ||||| |||||||||||| ||||||||||| |||||||||||||||||||||||||||| ||||||| | ||||| |||| ||||||| |
|
|
| T |
4157396 |
tcaaccacactgcctctaggataaaacaaactcagctacaacggtgcggttaactactgcactgtagaaaatcgttcgaaatttacacccttaaatatgg |
4157297 |
T |
 |
| Q |
253 |
tactaagaccactcttttaatactgaaaccact |
285 |
Q |
| |
|
| |||| | ||||| ||||||||||||| |||| |
|
|
| T |
4157296 |
tgctaatatcactc-tttaatactgaaatcact |
4157265 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #26
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 149 - 296
Target Start/End: Complemental strand, 19995435 - 19995288
Alignment:
| Q |
149 |
gactatcaaccacgccgcctccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccttc-aa |
247 |
Q |
| |
|
|||||||||||||| | ||| | |||||||||||| ||||||||||| |||||||||||||| ||| |||||||||| ||||||| ||||||| || || |
|
|
| T |
19995435 |
gactatcaaccacggcaccttcgggataaaacaagcccagctacaactatgcggttaactactacaccgtagaaaacctttcgagatttacaccctcaaa |
19995336 |
T |
 |
| Q |
248 |
tatggtactaagaccactcttttaatactgaaaccactccaatatggta |
296 |
Q |
| |
|
||| ||||||| | |||| |||||||||||||||||| ||||||||| |
|
|
| T |
19995335 |
tatcgtactaaaaacact-atttaatactgaaaccactttaatatggta |
19995288 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #27
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 201 - 296
Target Start/End: Original strand, 11428124 - 11428219
Alignment:
| Q |
201 |
ggttaactactgcactgtagaaaaccgttcgagaattacaccttc-aatatggtactaagaccactcttttaatactgaaaccactccaatatggta |
296 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||| ||||||| || |||||||||||||||| |||| |||||||||||||||||| ||||||||| |
|
|
| T |
11428124 |
ggttaagtactgcactgtagaaaaccgttcgagatttacaccatcaaatatggtactaagactactc-tttaatactgaaaccactttaatatggta |
11428219 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #28
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 5 - 203
Target Start/End: Complemental strand, 2760422 - 2760233
Alignment:
| Q |
5 |
ttgtttttggaattctaaattgttgtattttggtttttcaaattctattttaaaagagaatatctatcgaagttgttactagattgagtcaagaccaggt |
104 |
Q |
| |
|
||||||||||| ||| ||| |||||||||||||||| |||||| |||||| |||||||| ||| ||||||||||||||| || ||| | |||||||| |
|
|
| T |
2760422 |
ttgtttttggatttccaaacagttgtattttggttttccaaattgtattttgttagagaataactagcgaagttgttactaggttaagttacgaccaggt |
2760323 |
T |
 |
| Q |
105 |
cgtcctctttaatacgtttcgtgacactgaaattgtataaggccgactatcaaccacgccgcctccaggataaaacaagttcagctacaactgtgcggt |
203 |
Q |
| |
|
||| |||||||| |||||| ||| | ||| | ||||| |||||||||||| |||||||||||||||||||| ||| ||||||| |||||| |
|
|
| T |
2760322 |
cgttctctttaaaacgttttgtggc------attatgcaaggcagactatcaacca---cgcctccaggataaaacaagctcaaatacaactttgcggt |
2760233 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #29
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 63 - 226
Target Start/End: Complemental strand, 22695393 - 22695226
Alignment:
| Q |
63 |
aatatctatcgaagttgttactagattgagtcaagaccaggtcgtcctctttaatacgtttcgtgacactg----aaattgtataaggccgactatcaac |
158 |
Q |
| |
|
||||| |||||| ||||||||||| ||||| || || | || | |||||||| ||||||||||||| || ||||||| ||| | || ||||| |
|
|
| T |
22695393 |
aatatatatcgatgttgttactaggttgagacacgattatgttgctctctttaacacgtttcgtgacattgctcaaaattgtgcaagacatacaatcaat |
22695294 |
T |
 |
| Q |
159 |
cacgccgcctccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaacc |
226 |
Q |
| |
|
||| ||||||||| |||||||||||| |||||||||||||||||||||| |||||| ||||||||||| |
|
|
| T |
22695293 |
cacaccgcctccacgataaaacaagtacagctacaactgtgcggttaaccactgcattgtagaaaacc |
22695226 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 73 - 129
Target Start/End: Complemental strand, 11534790 - 11534734
Alignment:
| Q |
73 |
gaagttgttactagattgagtcaagaccaggtcgtcctctttaatacgtttcgtgac |
129 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||| |||||||| |||||||||||| |
|
|
| T |
11534790 |
gaagttgttactaggttgagtcaagaccaggtcgctctctttaagacgtttcgtgac |
11534734 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 73 - 129
Target Start/End: Complemental strand, 11560300 - 11560244
Alignment:
| Q |
73 |
gaagttgttactagattgagtcaagaccaggtcgtcctctttaatacgtttcgtgac |
129 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||| |||||||| |||||||||||| |
|
|
| T |
11560300 |
gaagttgttactaggttgagtcaagaccaggtcgctctctttaagacgtttcgtgac |
11560244 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 72 - 133
Target Start/End: Original strand, 11428025 - 11428086
Alignment:
| Q |
72 |
cgaagttgttactagattgagtcaagaccaggtcgtcctctttaatacgtttcgtgacactg |
133 |
Q |
| |
|
||||||||||| |||||||||||| |||||||||| |||||||| |||||||||| ||||| |
|
|
| T |
11428025 |
cgaagttgttattagattgagtcacgaccaggtcgctctctttaagacgtttcgtggcactg |
11428086 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #33
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 221 - 308
Target Start/End: Complemental strand, 2863429 - 2863339
Alignment:
| Q |
221 |
aaaaccgttcgagaattacaccttcaatatggtactaagaccactc---ttttaatactgaaaccactccaatatggtactaagaccactc |
308 |
Q |
| |
|
|||| ||||||| |||||||||| ||||||| ||||||| |||||| ||||| ||||||||||| || | |||||||||| |||||||| |
|
|
| T |
2863429 |
aaaaacgttcgaaaattacacctccaatatgatactaaggccactcatattttagtactgaaaccaatcaattatggtactatgaccactc |
2863339 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 226 - 308
Target Start/End: Complemental strand, 2882728 - 2882643
Alignment:
| Q |
226 |
cgttcgagaattacaccttcaatatggtactaagaccactc---ttttaatactgaaaccactccaatatggtactaagaccactc |
308 |
Q |
| |
|
||||||| |||||||||| ||||||| ||||||| |||||| ||||| ||||||||||| || | |||||| ||| |||||||| |
|
|
| T |
2882728 |
cgttcgaaaattacacctccaatatgatactaaggccactcatattttagtactgaaaccaatcaattatggtgctatgaccactc |
2882643 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 246 - 296
Target Start/End: Complemental strand, 25314391 - 25314342
Alignment:
| Q |
246 |
aatatggtactaagaccactcttttaatactgaaaccactccaatatggta |
296 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||| |||| ||||||||| |
|
|
| T |
25314391 |
aatatggtactaagaccactc-tttaatactgaaatcactttaatatggta |
25314342 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 246 - 296
Target Start/End: Complemental strand, 26201885 - 26201836
Alignment:
| Q |
246 |
aatatggtactaagaccactcttttaatactgaaaccactccaatatggta |
296 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||| |||| ||||||||| |
|
|
| T |
26201885 |
aatatggtactaagaccactc-tttaatactgaaatcactttaatatggta |
26201836 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 72 - 133
Target Start/End: Original strand, 19674295 - 19674356
Alignment:
| Q |
72 |
cgaagttgttactagattgagtcaagaccaggtcgtcctctttaatacgtttcgtgacactg |
133 |
Q |
| |
|
||||||||||||||| |||||||| ||||||||| |||||||| ||||||| || ||||| |
|
|
| T |
19674295 |
cgaagttgttactaggttgagtcacgaccaggtcactctctttaagacgtttcatggcactg |
19674356 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 178; Significance: 6e-96; HSPs: 36)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 178; E-Value: 6e-96
Query Start/End: Original strand, 10 - 296
Target Start/End: Complemental strand, 25543537 - 25543247
Alignment:
| Q |
10 |
tttggaattctaaattgttgtattttggtttttcaaattctattttaaaagagaatatctatcgaagttgttactagattgagtcaagaccaggtcgtcc |
109 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||| |||||||| | ||||||| | |
|
|
| T |
25543537 |
tttggaattctaaactgttgtattttggtttttcaaattctattttaaaagacaatatttatcgaagttgttactaggttgagtcacaatcaggtcgcac |
25543438 |
T |
 |
| Q |
110 |
tctttaatacgtttcgtgacactg----aaattgtataaggccgactatcaaccacgccgcctccaggataaaacaagttcagctacaactgtgcggtta |
205 |
Q |
| |
|
||||||| |||||||||| |||| ||||||| ||| |||||||||||| ||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
25543437 |
tctttaagacgtttcgtggtactgcctaaaattgtgcaagataaactatcaaccacatcgcctccaggataaaacaagtctagctacaactgtgcggtta |
25543338 |
T |
 |
| Q |
206 |
actactgcactgtagaaaaccgttcgagaattacaccttcaatatggtactaagaccactcttttaatactgaaaccactccaatatggta |
296 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
25543337 |
actactgcactgtagaaaaccgttcgagaattacaccttcaatatggtactaagaccactcttttaatactgaaaccactttaatatggta |
25543247 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 88 - 308
Target Start/End: Original strand, 23866066 - 23866285
Alignment:
| Q |
88 |
ttgagtcaagaccaggtcgtcctctttaatacgtttcgtgacactg----aaattgtataaggccgactatcaaccacgccgcctccaggataaaacaag |
183 |
Q |
| |
|
|||||||| |||||||||| |||||||| |||||||||| ||||| ||||||| ||| | ||||||||||||||||||||||||||||||||||| |
|
|
| T |
23866066 |
ttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattgtgcaagacagactatcaaccacgccgcctccaggataaaacaag |
23866165 |
T |
 |
| Q |
184 |
ttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccttcaatatggtactaagaccactcttttaatactgaaacca |
283 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
23866166 |
ctcagctgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccttcaatatggtactaagaccactcttttaatgctgaaa--- |
23866262 |
T |
 |
| Q |
284 |
ctccaatatggtactaagaccactc |
308 |
Q |
| |
|
|||||||||||||| |||||||| |
|
|
| T |
23866263 |
--ccaatatggtactatgaccactc |
23866285 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 65 - 285
Target Start/End: Complemental strand, 44510797 - 44510573
Alignment:
| Q |
65 |
tatctatcgaagttgttactagattgagtcaagaccaggtcgtcctctttaatacgtttcgtgacactg----aaattgtataaggccgactatcaacca |
160 |
Q |
| |
|
|||||| ||||||||||||||| |||||||| |||||| | | |||||||| |||||| ||| ||||| ||||||| ||| | |||||||||||| |
|
|
| T |
44510797 |
tatctaccgaagttgttactaggttgagtcacgaccagattgctctctttaagacgttttgtggcactgtccaaaattgtgcaagacagactatcaacca |
44510698 |
T |
 |
| Q |
161 |
cgccgcctccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccttcaatatggtactaaga |
260 |
Q |
| |
|
||||||||||||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
44510697 |
cgccgcctccaggataaaacaagctcagctgcaactgtgcggttaacttctgcactgtagaaaaccgttcgagaattacaccttcaatatggtactaaga |
44510598 |
T |
 |
| Q |
261 |
ccactcttttaatactgaaaccact |
285 |
Q |
| |
|
|||| |||||||||||||||||||| |
|
|
| T |
44510597 |
ccacacttttaatactgaaaccact |
44510573 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 65 - 284
Target Start/End: Original strand, 4930208 - 4930431
Alignment:
| Q |
65 |
tatctatcgaagttgttactagattgagtcaagaccaggtcgtcctctttaatacgtttcgtgacactg----aaattgtataaggccgactatcaacca |
160 |
Q |
| |
|
|||||| ||||||||||||||| |||||||| |||||||||| |||||||| |||||||||| ||||| ||||||| |||| | ||||||||||| |
|
|
| T |
4930208 |
tatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattgtgtaagtcatactatcaacca |
4930307 |
T |
 |
| Q |
161 |
cgccgcctccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccttca-atatggtactaag |
259 |
Q |
| |
|
||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| |
|
|
| T |
4930308 |
cgccgcctccaggataaaacaagcccaactacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcatatatggtactaag |
4930407 |
T |
 |
| Q |
260 |
accactcttttaatactgaaaccac |
284 |
Q |
| |
|
||||||| ||||||||||||||||| |
|
|
| T |
4930408 |
accactc-tttaatactgaaaccac |
4930431 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 67 - 308
Target Start/End: Complemental strand, 9651085 - 9650842
Alignment:
| Q |
67 |
tctatcgaagttgttactagattgagtcaagaccaggtcgtcctctttaatacgtttcgtgacactg----aaattgtataaggccgactatcaaccacg |
162 |
Q |
| |
|
|||| ||||||||||||||| |||||||| |||||||||| |||||||| |||||||||| ||||| ||||||| ||| | |||||||||||||| |
|
|
| T |
9651085 |
tctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattgtgcaagacagactatcaaccacg |
9650986 |
T |
 |
| Q |
163 |
ccgcctccaggataaaacaagttcagctac---aactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccttcaatatggtactaag |
259 |
Q |
| |
|
|||||||||||||||||||||| ||||| | |||||| ||||| |||||||||||||||||||||||||||||||||||| || |||||||||||||| |
|
|
| T |
9650985 |
ccgcctccaggataaaacaagtccagctgctgcaactgtacggttgactactgcactgtagaaaaccgttcgagaattacacttttaatatggtactaag |
9650886 |
T |
 |
| Q |
260 |
accactcttttaatactgaaaccactccaatatggtactaagaccactc |
308 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||| |||||||| |
|
|
| T |
9650885 |
accactcttttaatactgaaa-----ccaatatggtactatgaccactc |
9650842 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 65 - 281
Target Start/End: Complemental strand, 44423257 - 44423037
Alignment:
| Q |
65 |
tatctatcgaagttgttactagattgagtcaagaccaggtcgtcctctttaatacgtttcgtgacactga----aattgtataaggccgactatcaacca |
160 |
Q |
| |
|
|||||| | ||||||||||||| |||||||| || ||| ||| |||||||| |||||||||| |||||| |||||| ||||| |||||||||| | |
|
|
| T |
44423257 |
tatctaccaaagttgttactaggttgagtcacgatcagatcgctctctttaagacgtttcgtggcactgaccaaaattgttcaaggcagactatcaacta |
44423158 |
T |
 |
| Q |
161 |
cgccgcctccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccttc-aatatggtactaag |
259 |
Q |
| |
|
|||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||| |
|
|
| T |
44423157 |
cgccgcctccaggataaaacaagtccatctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaag |
44423058 |
T |
 |
| Q |
260 |
accactcttttaatactgaaac |
281 |
Q |
| |
|
||||||| |||||||||||||| |
|
|
| T |
44423057 |
accactc-tttaatactgaaac |
44423037 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 66 - 247
Target Start/End: Original strand, 4579484 - 4579669
Alignment:
| Q |
66 |
atctatcgaagttgttactagattgagtcaagaccaggtcgtcctctttaatacgtttcgtgacactg----aaattgtataaggccgactatcaaccac |
161 |
Q |
| |
|
||||||||||||||||||||| |||||||| |||||||||| |||||||| |||||||||| ||||| ||||||| ||||| ||||||||||||| |
|
|
| T |
4579484 |
atctatcgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattgtgcaaggcagactatcaaccac |
4579583 |
T |
 |
| Q |
162 |
gccgcctccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccttcaa |
247 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| ||||||||||| |||| |
|
|
| T |
4579584 |
gccgcctccaggataaaacaagtccagctacaactgtgcgattaactactgcactgtagaaaaccgttcaagaattacaccctcaa |
4579669 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 65 - 285
Target Start/End: Original strand, 26341174 - 26341398
Alignment:
| Q |
65 |
tatctatcgaagttgttactagattgagtcaagaccaggtcgtcctctttaatacgtttcgtgacactg----aaattgtataaggccgactatcaacca |
160 |
Q |
| |
|
|||||| ||||||||||||||| |||||||| |||||||||| |||||||| || ||||||| ||||| ||||||| ||||| |||||||||||| |
|
|
| T |
26341174 |
tatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacatttcgtggcactgcccaaaattgtgcaaggcagactatcaacca |
26341273 |
T |
 |
| Q |
161 |
cgccgcctccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccttc-aatatggtactaag |
259 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||| || ||||||||| |||||||||||| | ||| |||||||||||| | |||||||||||||| |
|
|
| T |
26341274 |
cgccgcctccaggataaaacaagtccagctacaactgttcgattaactactacactgtagaaaatcattcaagaattacacctccaaatatggtactaag |
26341373 |
T |
 |
| Q |
260 |
accactcttttaatactgaaaccact |
285 |
Q |
| |
|
||||||| |||||||||||||||||| |
|
|
| T |
26341374 |
accactc-tttaatactgaaaccact |
26341398 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 65 - 296
Target Start/End: Complemental strand, 13314356 - 13314122
Alignment:
| Q |
65 |
tatctatcgaagttgttactagattgagtcaagaccaggtcgtcctctttaatacgtttcgtgacactg----aaattgtataaggccgactatcaacca |
160 |
Q |
| |
|
|||||| || |||||||||||| |||||||| |||||| ||| |||||||| |||||||||| |||| ||||||| |||| |||||||| ||| |
|
|
| T |
13314356 |
tatctaccgtagttgttactaggttgagtcacgaccagatcgctctctttaagacgtttcgtggtactgcccaaaattgtgcaaggtagactatcagcca |
13314257 |
T |
 |
| Q |
161 |
cgccgcctccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccttc-aatatggtactaag |
259 |
Q |
| |
|
|| |||||||||||||||||||| |||||||||||||| | ||||||||||||||||||||||||||||||||||||||||| | |||||||||||||| |
|
|
| T |
13314256 |
cgtcgcctccaggataaaacaagctcagctacaactgttcaattaactactgcactgtagaaaaccgttcgagaattacacctccaaatatggtactaag |
13314157 |
T |
 |
| Q |
260 |
accactcttttaatactgaaaccactccaatatggta |
296 |
Q |
| |
|
||||||| ||||||||||||||||| ||||||||| |
|
|
| T |
13314156 |
accactc--ttaatactgaaaccactttaatatggta |
13314122 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 65 - 285
Target Start/End: Original strand, 27238217 - 27238441
Alignment:
| Q |
65 |
tatctatcgaagttgttactagattgagtcaagaccaggtcgtcctctttaatacgtttcgtgacactg----aaattgtataaggccgactatcaacca |
160 |
Q |
| |
|
||||||| |||||||||||||| |||||||| |||||||||| |||||||| |||||| ||| ||||| ||||||| |||||| ||||||||| || |
|
|
| T |
27238217 |
tatctatggaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgttttgtggcactgctcaaaattgtgtaaggcagactatcaatca |
27238316 |
T |
 |
| Q |
161 |
cgccgcctccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccttc-aatatggtactaag |
259 |
Q |
| |
|
|||||||| || |||||||||||| |||||||||||| | | |||||||||||||||||||||| ||||||||| ||||||| || |||||| ||||||| |
|
|
| T |
27238317 |
cgccgcctgcaagataaaacaagtccagctacaactgcgtgcttaactactgcactgtagaaaatcgttcgagatttacaccctcaaatatgatactaag |
27238416 |
T |
 |
| Q |
260 |
accactcttttaatactgaaaccact |
285 |
Q |
| |
|
||||||| |||||| ||||||||||| |
|
|
| T |
27238417 |
accactc-tttaattctgaaaccact |
27238441 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 5 - 308
Target Start/End: Original strand, 8075977 - 8076261
Alignment:
| Q |
5 |
ttgtttttggaattctaaattgttgtattttggtttttcaaattctattttaaaagagaatatctatcgaagttgttactagattgagtcaagaccaggt |
104 |
Q |
| |
|
||||||||||| ||| ||| ||||||||||||||||| ||||||||||| ||||| |||||||||||| | |||||||| |||||||| |
|
|
| T |
8075977 |
ttgtttttggatttccaaactgttgtattttggttttccaaattctatt------------atctactgaagttgttactgggttgagtcacgaccaggt |
8076064 |
T |
 |
| Q |
105 |
cgtcctctttaatacgtttcgtgacactg----aaattgtataaggccgactatcaaccacgccgcctccaggataaaacaagttcagctacaactgtgc |
200 |
Q |
| |
|
|| |||||||| |||||||||| ||||| ||||||| ||| | ||||||||||||||| ||||||||||||||||||| |||||| ||||||||| |
|
|
| T |
8076065 |
cgctctctttaagacgtttcgtggcactgcctaaaattgtgcaagacagactatcaaccacgctgcctccaggataaaacaagctcagctgcaactgtgc |
8076164 |
T |
 |
| Q |
201 |
ggttaactactgcactgtagaaaaccgttcgagaattacaccttcaatatggtactaagaccactcttttaatactgaaaccactccaatatggtactaa |
300 |
Q |
| |
|
| |||||| |||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| |
|
|
| T |
8076165 |
gattaact-----actgtagaaaactgttcgag-attacaccttcaatatggtactaagaccactcttttaatgttgaaa-----ccaatatggtactat |
8076253 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 9 - 280
Target Start/End: Original strand, 9008086 - 9008357
Alignment:
| Q |
9 |
ttttggaattctaaattgttgtattttggtttttcaaattctattttaaaagagaatatctatcgaagttgttactagattgagtcaagaccaggtcgtc |
108 |
Q |
| |
|
||||||| ||| ||| ||||||||||||||||| |||||||||||| ||||||| || | | |||||||||||| |||||||| ||||| ||| |
|
|
| T |
9008086 |
ttttggatttccaaactgttgtattttggttttctaaattctattttgaaagagagtaccaa----agttgttactaggttgagtcacgaccatgtccct |
9008181 |
T |
 |
| Q |
109 |
ctctttaatacgtttcgtgacactg----aaattgtataaggccgactatcaaccacgccgcctccaggataaaacaagttcagctacaactgtgcggtt |
204 |
Q |
| |
|
|||||||| |||||| |||||||| ||||||| ||||| | ||||||| || | |||||||||||||||||||| || ||||||||||| | || |
|
|
| T |
9008182 |
ctctttaagacgtttagtgacactactcaaaattgtgcaaggcaggctatcaatcatgaagcctccaggataaaacaagtccaactacaactgtgtgatt |
9008281 |
T |
 |
| Q |
205 |
aactactgcactgtagaaaaccgttcgagaattacaccttcaatatggtactaagaccactcttttaatactgaaa |
280 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||||||||||||||| |||||| | |||||||||||||| |||| |
|
|
| T |
9008282 |
aactactgcactgtagaaaatcgttcgagaattacaccttcaatatgatactaaaatcactcttttaataccgaaa |
9008357 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 149 - 298
Target Start/End: Complemental strand, 26287177 - 26287028
Alignment:
| Q |
149 |
gactatcaaccacgccgcctccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccttcaat |
248 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| | ||||||||||||||| ||||||||||||||| ||||||| |||||||| |||||||| |||| |
|
|
| T |
26287177 |
gactatcaaccacgccgcctccaggataaaacaaatccagctacaactgtgcagttaactactgcactatagaaaatcgttcgagctttacacctccaat |
26287078 |
T |
 |
| Q |
249 |
atggtactaagaccactcttttaatactgaaaccactccaatatggtact |
298 |
Q |
| |
|
||||||| ||||||| ||||||||||||||||||||| ||||||||||| |
|
|
| T |
26287077 |
atggtaccaagaccattcttttaatactgaaaccactttaatatggtact |
26287028 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 65 - 296
Target Start/End: Original strand, 8268268 - 8268504
Alignment:
| Q |
65 |
tatctatcgaagttgttactagattgagtcaagaccaggtcgtcctctttaatacgtttcgtgacactg----aaattgtataaggccgactatcaacca |
160 |
Q |
| |
|
|||||| |||||||||||||| ||||||||| |||||||||| |||||||| |||||| ||| ||||| ||||||| ||| | |||||||||||| |
|
|
| T |
8268268 |
tatctaccgaagttgttactatattgagtcacgaccaggtcgctctctttaagacgttttgtggcactgtccaaaattgtgcaagacagactatcaacca |
8268367 |
T |
 |
| Q |
161 |
cgccgcctccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtag-aaaaccgttcgagaattacaccttc-aatatggtactaa |
258 |
Q |
| |
|
|||| |||||| |||||||||||| ||||||||||||| || ||||||||||||| |||| |||||||||||| |||||||||| | ||||||||||||| |
|
|
| T |
8268368 |
cgccacctccatgataaaacaagtccagctacaactgttcgattaactactgcaccgtagaaaaaccgttcgataattacacctccaaatatggtactaa |
8268467 |
T |
 |
| Q |
259 |
gaccactcttttaatactgaaaccactccaatatggta |
296 |
Q |
| |
|
|| ||||| |||| ||||||||||||| ||||||||| |
|
|
| T |
8268468 |
gatcactc-tttagtactgaaaccactttaatatggta |
8268504 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 134 - 296
Target Start/End: Original strand, 12799458 - 12799620
Alignment:
| Q |
134 |
aaattgtataaggccgactatcaaccacgccgcctccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgag |
233 |
Q |
| |
|
||||||| ||||| |||||||||||||||| | |||||||||||| |||| ||||||||||||||||||||||||||||| || ||||||||||||||| |
|
|
| T |
12799458 |
aaattgtgcaaggcagactatcaaccacgccacatccaggataaaataagtccagctacaactgtgcggttaactactgcattgcagaaaaccgttcgag |
12799557 |
T |
 |
| Q |
234 |
aattacaccttc-aatatggtactaagaccactcttttaatactgaaaccactccaatatggta |
296 |
Q |
| |
|
||||||||| || ||||||||||||||||||||| ||||||||||||| |||| ||||||||| |
|
|
| T |
12799558 |
aattacaccctcaaatatggtactaagaccactc-tttaatactgaaatcactttaatatggta |
12799620 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 66 - 313
Target Start/End: Complemental strand, 23247052 - 23246797
Alignment:
| Q |
66 |
atctatcgaagttgttactagattgagtcaagaccaggtcgtcctctttaatacgtttcgtgacactg----aaattgtataaggccgactatcaaccac |
161 |
Q |
| |
|
||||| |||||||||||||||||||||||| |||||||||| |||||||| | |||||||| ||||| ||||||| ||||| ||||||||||||| |
|
|
| T |
23247052 |
atctaccgaagttgttactagattgagtcacgaccaggtcgctctctttaagatgtttcgtggcactgcccaaaattgtgcaaggcagactatcaaccac |
23246953 |
T |
 |
| Q |
162 |
gccgcctccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccttc-aatatgg-tactaag |
259 |
Q |
| |
|
|||||||||||||||||||||| ||| ||||||||||||| |||||||||| | ||||||||||||| | ||||||||| || ||||||| || ||| |
|
|
| T |
23246952 |
gccgcctccaggataaaacaagctcacctacaactgtgcgattaactactgttttatagaaaaccgttccaaaattacaccctcaaatatggctataaag |
23246853 |
T |
 |
| Q |
260 |
accactc--ttttaatactgaaaccactccaatatggtactaagaccactcaaata |
313 |
Q |
| |
|
|||||| ||||||| |||||||||| ||||||||||||||||| ||||||| |
|
|
| T |
23246852 |
gccactcggatttaatattgaaaccactattatatggtactaagaccattcaaata |
23246797 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 150 - 296
Target Start/End: Original strand, 30258164 - 30258310
Alignment:
| Q |
150 |
actatcaaccacgccgcctccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccttc-aat |
248 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||| |||||| | |||||||||| ||| |
|
|
| T |
30258164 |
actatcaatcacgccgcctccaggataaaacaagtccagctacaacagtgcggttaactactgcactgtagaaaattgttcgaaatttacaccttcaaat |
30258263 |
T |
 |
| Q |
249 |
atggtactaagaccactcttttaatactgaaaccactccaatatggta |
296 |
Q |
| |
|
|||||||||||||||||| |||||||||||||||||| ||||||||| |
|
|
| T |
30258264 |
atggtactaagaccactc-tttaatactgaaaccactttaatatggta |
30258310 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #18
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 62 - 269
Target Start/End: Original strand, 12254051 - 12254262
Alignment:
| Q |
62 |
gaatatctatcgaagttgttactagattgagtcaagaccaggtcgtcctctttaatacgtttcgtgacactg----aaattgtataaggccgactatcaa |
157 |
Q |
| |
|
|||||||||||||||||||||| || ||||||| |||||||||| |||||||| | |||| ||| ||||| || |||| ||||| ||||||||| |
|
|
| T |
12254051 |
gaatatctatcgaagttgttaccaggttgagtcgcgaccaggtcgctctctttaagatgttttgtggcactgcctaaagttgtgcaaggcagactatcaa |
12254150 |
T |
 |
| Q |
158 |
ccacgccgcctccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccttcaatatggtacta |
257 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||| |||| |||||||| |||||||||||| |
|
|
| T |
12254151 |
tcacgccgcctacaggataaaacaagttcagctacaactgtgcggttaactaatgctgtgtagaaaaccgtttgagatttacacctcaaatatggtacta |
12254250 |
T |
 |
| Q |
258 |
agaccactcttt |
269 |
Q |
| |
|
|| ||| ||||| |
|
|
| T |
12254251 |
agtccagtcttt |
12254262 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #19
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 33 - 296
Target Start/End: Complemental strand, 10388517 - 10388252
Alignment:
| Q |
33 |
tttggtttttcaaattctattttaaaagagaatatctatcgaagttgttactagattgagtcaagaccaggtcgtcctctttaatacgtttcgtgacact |
132 |
Q |
| |
|
||||| ||| ||||||||||||| ||| |||||||||| ||||||||||||||| |||||||| |||||||||| |||||||| |||||| ||| || | |
|
|
| T |
10388517 |
tttggatttccaaattctattttgaaaaagaatatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgttttgtggcatt |
10388418 |
T |
 |
| Q |
133 |
g---aaattgtataaggccgactatcaaccacgccgcctccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgtt |
229 |
Q |
| |
|
| || |||| | | ||| |||||| ||||||||||||||||||||||| ||| ||||||||||||| |||||||||||||| || |||| ||| |
|
|
| T |
10388417 |
gcccaagttgtgcatgatagac-atcaacaacgccgcctccaggataaaacaaactcaactacaactgtgcgattaactactgcactctaaaaaattgtt |
10388319 |
T |
 |
| Q |
230 |
cgagaattacaccttc-aatatggtactaagaccactcttttaatactgaaaccactccaatatggta |
296 |
Q |
| |
|
||||| ||||||| || |||| |||||||| ||||||| |||||||||||||||||| ||||||||| |
|
|
| T |
10388318 |
cgagatttacaccctcaaataaggtactaataccactc-tttaatactgaaaccactttaatatggta |
10388252 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #20
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 33 - 296
Target Start/End: Original strand, 21671138 - 21671405
Alignment:
| Q |
33 |
tttggtttttcaaattctattttaaaagagaatatctatcgaagttgttactagattgagtcaagaccaggtcgtcctctttaatacgtttcgtgacact |
132 |
Q |
| |
|
||||| ||| ||||||||||||| ||| ||||||||| |||||||||||||| |||||||| ||| ||| | |||||||| | |||| ||| |||| |
|
|
| T |
21671138 |
tttggatttccaaattctattttgaaatagaatatctgctgaagttgttactaggttgagtcacgactaggaccctctctttaagaagtttagtggcact |
21671237 |
T |
 |
| Q |
133 |
g----aaattgtataaggccgactatcaaccacgccgcctccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgt |
228 |
Q |
| |
|
| || |||| ||||| ||| |||||| || ||| ||||| |||||||||| ||| |||||||||||||||||||||||||| ||||||||| ||| |
|
|
| T |
21671238 |
gcccaaagttgtgcaaggcagacaatcaacaacttcgcatccagaataaaacaagctcacctacaactgtgcggttaactactgcagtgtagaaaatcgt |
21671337 |
T |
 |
| Q |
229 |
tcgagaattacaccttcaatatggtactaagaccactcttttaatactgaaaccactccaatatggta |
296 |
Q |
| |
|
|||||| ||| |||| |||||||| || ||||||| |||||||||| |||||||||| ||||||||| |
|
|
| T |
21671338 |
tcgagatttaaacctccaatatgggacaaagaccattcttttaataatgaaaccactttaatatggta |
21671405 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #21
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 23 - 240
Target Start/End: Original strand, 29150868 - 29151088
Alignment:
| Q |
23 |
attgttgtattttggtttttcaaattctattttaaaagagaatatctatcgaagttgttactagattgagtcaagaccaggtcgtcctctttaatacgtt |
122 |
Q |
| |
|
|||||||| |||||| ||||||||||||||||| ||| ||||||| || ||||||||||||||| |||||||| |||||| ||| || ||||| ||||| |
|
|
| T |
29150868 |
attgttgt-ttttggattttcaaattctattttgaaaaagaatatataccgaagttgttactaggttgagtcacgaccagatcgctctttttaagacgtt |
29150966 |
T |
 |
| Q |
123 |
tcgtgacactg----aaattgtataaggccgactatcaaccacgccgcctccaggataaaacaagttcagctacaactgtgcggttaactactgcactgt |
218 |
Q |
| |
|
||||||||||| ||||||| ||||| ||||||||||||| |||||||| ||||||| |||||||||||||||| ||| |||||| |||| | | |
|
|
| T |
29150967 |
tcgtgacactgctcaaaattgtgcaaggcaaactatcaaccacgtcgcctccaagataaaataagttcagctacaactacgcgcttaacttttgcattat |
29151066 |
T |
 |
| Q |
219 |
agaaaaccgttcgagaattaca |
240 |
Q |
| |
|
|||| |||||| |||| ||||| |
|
|
| T |
29151067 |
agaagaccgtttgagatttaca |
29151088 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #22
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 156 - 269
Target Start/End: Complemental strand, 42626616 - 42626502
Alignment:
| Q |
156 |
aaccacgccgcctccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccttc-aatatggta |
254 |
Q |
| |
|
||||| |||||| ||||||||||| |||| ||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||| || ||||||||| |
|
|
| T |
42626616 |
aaccatgccgccgccaggataaaataagtccagctacaactgtgcggttaattactgcactgtagaaaatcgttcgagaattacaccctcaaatatggta |
42626517 |
T |
 |
| Q |
255 |
ctaagaccactcttt |
269 |
Q |
| |
|
|||||| |||||||| |
|
|
| T |
42626516 |
ctaagatcactcttt |
42626502 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #23
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 149 - 296
Target Start/End: Complemental strand, 13142933 - 13142786
Alignment:
| Q |
149 |
gactatcaaccacgccgcctccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacacc-ttcaa |
247 |
Q |
| |
|
|||| ||||| |||||||| |||||||||||||||||||||||||||||| || |||||| |||||| |||||||| |||||||| ||||||| || || |
|
|
| T |
13142933 |
gactttcaacaacgccgccaccaggataaaacaagttcagctacaactgtaaggctaactattgcactatagaaaactgttcgagatttacaccgttaaa |
13142834 |
T |
 |
| Q |
248 |
tatggtactaagaccactcttttaatactgaaaccactccaatatggta |
296 |
Q |
| |
|
||||||||||||| ||||| ||||||| |||||||||| ||||||||| |
|
|
| T |
13142833 |
tatggtactaagatcactc-tttaatattgaaaccactttaatatggta |
13142786 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #24
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 63 - 298
Target Start/End: Complemental strand, 3357754 - 3357514
Alignment:
| Q |
63 |
aatatctatcgaagttgttactagattgagtcaagaccaggtcgtcctctttaatacgtttcgtgacactg----aaattgtataaggccgactatcaac |
158 |
Q |
| |
|
|||||||| ||||||||||||||| |||||||| |||||||||| |||||||| |||||||| | || | || |||| ||||| |||||||||| |
|
|
| T |
3357754 |
aatatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgcggtacagcccaaagttgtgcaaggcagactatcaac |
3357655 |
T |
 |
| Q |
159 |
cacgccgcctccaggataaaa-caagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattaca-ccttcaatatggtact |
256 |
Q |
| |
|
||||||| ||||| ||||||| ||| || |||||| |||| ||||||| | |||||||||||||| ||||| ||| ||||| ||| ||||||||||| |
|
|
| T |
3357654 |
cacgccgtctccatgataaaaacaaacacaactacaattgtgtggttaaccattgcactgtagaaaatcgttcaagatttacaccctaaaatatggtact |
3357555 |
T |
 |
| Q |
257 |
aagaccactcttttaatactgaaaccactccaatatggtact |
298 |
Q |
| |
|
|||| ||||| |||||||| ||||||||| ||||||||||| |
|
|
| T |
3357554 |
aagatcactc-tttaataccgaaaccactttaatatggtact |
3357514 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #25
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 149 - 298
Target Start/End: Original strand, 3880061 - 3880207
Alignment:
| Q |
149 |
gactatcaaccacgccgcctccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacac-cttcaa |
247 |
Q |
| |
|
||||||||||||||||||||||||||||||| | | |||||||| || |||||||||||||||||||||||| |||||||||||||||| || || |
|
|
| T |
3880061 |
gactatcaaccacgccgcctccaggataaaa---gccccactacaactatgtggttaactactgcactgtagaaaatcgttcgagaattacactctcaaa |
3880157 |
T |
 |
| Q |
248 |
tatggtactaagaccactcttttaatactgaaaccactccaatatggtact |
298 |
Q |
| |
|
|||| |||||||||||||| ||||||| |||||||||| |||||| |||| |
|
|
| T |
3880158 |
tatgatactaagaccactc-tttaatattgaaaccactttaatatgatact |
3880207 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #26
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 134 - 283
Target Start/End: Complemental strand, 6591030 - 6590877
Alignment:
| Q |
134 |
aaattgtataaggccgactatcaaccacgccgcctccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgag |
233 |
Q |
| |
|
||||||| ||||| |||||||||||||||||||| ||||||||||||||||||| || ||||||| | ||||||||| || ||||||||| |||| ||| |
|
|
| T |
6591030 |
aaattgtgcaaggcagactatcaaccacgccgccttcaggataaaacaagttcagttataactgtgtgattaactactacattgtagaaaatcgtttgag |
6590931 |
T |
 |
| Q |
234 |
aattacaccttc-aatatgg-tactaagaccactc--ttttaatactgaaacca |
283 |
Q |
| |
|
||||||||| || ||||||| || |||| |||||| |||||||||||||||| |
|
|
| T |
6590930 |
aattacaccctcaaatatggctattaaggccactcgaatttaatactgaaacca |
6590877 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #27
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 149 - 269
Target Start/End: Original strand, 3284790 - 3284912
Alignment:
| Q |
149 |
gactatcaaccacgccgcctccaggataaaa-caagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccttc-a |
246 |
Q |
| |
|
||||||||||||| ||| || || ||||||| ||| ||||||||||| |||||||||||||| |||| ||||||||||||||||||||||||| || | |
|
|
| T |
3284790 |
gactatcaaccacaccgtcttcatgataaaaacaaactcagctacaaccgtgcggttaactaccgcacaatagaaaaccgttcgagaattacaccctcaa |
3284889 |
T |
 |
| Q |
247 |
atatggtactaagaccactcttt |
269 |
Q |
| |
|
|||||||||| |||||||||||| |
|
|
| T |
3284890 |
atatggtactgagaccactcttt |
3284912 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #28
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 33 - 223
Target Start/End: Original strand, 15642177 - 15642371
Alignment:
| Q |
33 |
tttggtttttcaaattctattttaaaagagaatatctatcgaagttgttactagattgagtcaagaccaggtcgtcctctttaatacgtttcgtgacact |
132 |
Q |
| |
|
||||| ||||||||||||||||| ||| |||||||||| |||||||||||| |||| |||| || ||||||| || ||||| ||||||| ||||||| |
|
|
| T |
15642177 |
tttggattttcaaattctattttgaaaaagaatatctaccgaagttgttacagaattgtgtcacgatcaggtcgctctttttaagacgtttcatgacact |
15642276 |
T |
 |
| Q |
133 |
----gaaattgtataaggccgactatcaaccacgccgcctccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaa |
223 |
Q |
| |
|
||||||| ||| | ||||||||| ||| ||||||||||| |||||| | ||||||||||| | ||||||||||||||||| |||||| |
|
|
| T |
15642277 |
atccaaaattgtggaagacaaactatcaactacgtcgcctccaggacaaaacaggctcagctacaacggcacggttaactactgcactatagaaa |
15642371 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #29
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 167 - 294
Target Start/End: Original strand, 23318067 - 23318192
Alignment:
| Q |
167 |
ctccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccttcaatatggtactaagaccactc |
266 |
Q |
| |
|
||||||||||||||| || | |||| ||||||||||||||||| ||| ||| |||| | |||||| |||||||| |||||||||||||||||||||| |
|
|
| T |
23318067 |
ctccaggataaaacaggt-cggctaaaactgtgcggttaactattgcttcgtacaaaaatggtcgagatttacacctccaatatggtactaagaccactc |
23318165 |
T |
 |
| Q |
267 |
ttttaatactgaaaccactccaatatgg |
294 |
Q |
| |
|
||||||||||||||||||| ||||||| |
|
|
| T |
23318166 |
-tttaatactgaaaccactctaatatgg |
23318192 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 5 - 101
Target Start/End: Complemental strand, 26287337 - 26287242
Alignment:
| Q |
5 |
ttgtttttggaattctaaattgttgtattttggtttttcaaattctattttaaaagagaatatctatcgaagttgttactagattgagtcaagacca |
101 |
Q |
| |
|
||||||||||| ||| ||| |||||||||| || ||| ||||||||||||| ||| | ||| |||| ||||||||||||||| |||||||| ||||| |
|
|
| T |
26287337 |
ttgtttttggatttcaaaactgttgtattt-ggatttccaaattctattttgaaaaataatctctaccgaagttgttactaggttgagtcacgacca |
26287242 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 210 - 296
Target Start/End: Original strand, 3045679 - 3045765
Alignment:
| Q |
210 |
ctgcactgtagaaaaccgttcgagaattacaccttc-aatatggtactaagaccactcttttaatactgaaaccactccaatatggta |
296 |
Q |
| |
|
||||||||||||||| ||||||||| ||||||| || ||||||||||||||||| ||| ||||||| |||||||| | ||||||||| |
|
|
| T |
3045679 |
ctgcactgtagaaaatcgttcgagatttacaccctcaaatatggtactaagaccgctc-tttaatattgaaaccattttaatatggta |
3045765 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 176 - 258
Target Start/End: Complemental strand, 45748647 - 45748562
Alignment:
| Q |
176 |
aaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaa---ccgttcgagaattacaccttcaatatggtactaa |
258 |
Q |
| |
|
|||||||||||| |||||||| |||| |||||||||||||||||||||| ||||||||||||| || | ||||||||||||| |
|
|
| T |
45748647 |
aaaacaagttcaactacaactatgcgattaactactgcactgtagaaaatcgtcgttcgagaattatacttcaaatatggtactaa |
45748562 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 73 - 298
Target Start/End: Original strand, 16372381 - 16372609
Alignment:
| Q |
73 |
gaagttgttactagattgagtcaagaccaggtcgtcctctttaatacgtttcgtgacactg---aaattgtataaggccgactatcaaccacgccgcctc |
169 |
Q |
| |
|
|||||||||||||| |||||||| ||||| |||| |||||||| | |||||||| |||| | || || ||| | |||||||||| | |||||| |
|
|
| T |
16372381 |
gaagttgttactaggttgagtcacgaccaagtcgctctctttaagatgtttcgtggcactaccaagatcgtgcaagacagactatcaac---gtcgcctc |
16372477 |
T |
 |
| Q |
170 |
caggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccttc-aatatgg-tactaagaccactc- |
266 |
Q |
| |
|
|| |||||||||||| | ||||| || |||| ||||||||| |||||||||||| |||| |||||||| ||| || ||||||| || |||| |||||| |
|
|
| T |
16372478 |
caagataaaacaagtgcgactaca-ctatgcgattaactacttcactgtagaaaatcgtttgagaattaaaccatcaaatatggctattaaggccactcg |
16372576 |
T |
 |
| Q |
267 |
-ttttaatactgaaaccactccaatatggtact |
298 |
Q |
| |
|
|||||||||||||||||| |||||||||| |
|
|
| T |
16372577 |
aatttaatactgaaaccactattatatggtact |
16372609 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 246 - 320
Target Start/End: Complemental strand, 23616317 - 23616241
Alignment:
| Q |
246 |
aatatggtactaagaccactcttttaa--tactgaaaccactccaatatggtactaagaccactcaaataagatgtt |
320 |
Q |
| |
|
|||||||| ||||||||||||| ||| |||||| |||||| ||||||||| || ||||||||||||| |||||| |
|
|
| T |
23616317 |
aatatggtgctaagaccactctattatggtactgagaccactataatatggtattatgaccactcaaatatgatgtt |
23616241 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 246 - 283
Target Start/End: Complemental strand, 40865288 - 40865252
Alignment:
| Q |
246 |
aatatggtactaagaccactcttttaatactgaaacca |
283 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
40865288 |
aatatggtactaagaccactc-tttaatactgaaacca |
40865252 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 149 - 258
Target Start/End: Complemental strand, 48064167 - 48064058
Alignment:
| Q |
149 |
gactatcaaccacgccgcctccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccttcaat |
248 |
Q |
| |
|
||||||||| || | || ||||| |||||||||||| | |||||||| | || ||||| |||||| |||| || | |||||||||||||| ||| || |
|
|
| T |
48064167 |
gactatcaatcatgtcgtctccacaataaaacaagtttatctacaactatacgactaacttctgcaccgtagctaatctttcgagaattacacattcgat |
48064068 |
T |
 |
| Q |
249 |
atggtactaa |
258 |
Q |
| |
|
|||||||||| |
|
|
| T |
48064067 |
atggtactaa |
48064058 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 154; Significance: 1e-81; HSPs: 39)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 65 - 283
Target Start/End: Complemental strand, 31449986 - 31449764
Alignment:
| Q |
65 |
tatctatcgaagttgttactagattgagtcaagaccaggtcgtcctctttaatacgtttcgtgacactg----aaattgtataaggccgactatcaacca |
160 |
Q |
| |
|
|||||||||||||||||||||| |||||||| |||||||||| |||||||| |||||||||| ||||| ||||||| ||| | |||||||||||| |
|
|
| T |
31449986 |
tatctatcgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattgtgcaagacagactatcaacca |
31449887 |
T |
 |
| Q |
161 |
cgccgcctccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccttcaatatggtactaaga |
260 |
Q |
| |
|
|||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
31449886 |
cgccgcctccaggataaaacaagtccagctgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccttcaatatggtactaaga |
31449787 |
T |
 |
| Q |
261 |
ccactcttttaatactgaaacca |
283 |
Q |
| |
|
||| ||||||||||||||||||| |
|
|
| T |
31449786 |
ccaatcttttaatactgaaacca |
31449764 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 65 - 308
Target Start/End: Original strand, 17025910 - 17026157
Alignment:
| Q |
65 |
tatctatcgaagttgttactagattgagtcaagaccaggtcgtcctctttaatacgtttcgtgacactg----aaattgtataaggccgactatcaacca |
160 |
Q |
| |
|
|||||| ||||||||||||||| |||||||| |||||||||| |||||||| |||||||||| ||||| | ||||| ||| | ||||||||| || |
|
|
| T |
17025910 |
tatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaacattgtgcaagacagactatcaatca |
17026009 |
T |
 |
| Q |
161 |
cgccgcctccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccttcaatatggtactaaga |
260 |
Q |
| |
|
|| ||||||||||||||||||||| |||||||||||| || ||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||| |
|
|
| T |
17026010 |
cgtcgcctccaggataaaacaagtctagctacaactgttcgattaactactgcactgtagaaaaccgttcgagaattacacctccaatatggtaccaaga |
17026109 |
T |
 |
| Q |
261 |
ccactcttttaatactgaaaccactccaatatggtactaagaccactc |
308 |
Q |
| |
|
||| |||||||||| |||||||||| |||||||||||| ||||||| |
|
|
| T |
17026110 |
ccattcttttaatattgaaaccactttaatatggtactattaccactc |
17026157 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 65 - 308
Target Start/End: Original strand, 17556402 - 17556649
Alignment:
| Q |
65 |
tatctatcgaagttgttactagattgagtcaagaccaggtcgtcctctttaatacgtttcgtgacactg----aaattgtataaggccgactatcaacca |
160 |
Q |
| |
|
|||||| ||||||||||||||| |||||||| |||||||||| |||||||| |||||||||| ||||| | ||||| ||| | ||||||||| || |
|
|
| T |
17556402 |
tatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaacattgtgcaagacagactatcaatca |
17556501 |
T |
 |
| Q |
161 |
cgccgcctccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccttcaatatggtactaaga |
260 |
Q |
| |
|
|| ||||||||||||||||||||| |||||||||||| || ||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||| |
|
|
| T |
17556502 |
cgtcgcctccaggataaaacaagtctagctacaactgttcgattaactactgcactgtagaaaaccgttcgagaattacacctccaatatggtaccaaga |
17556601 |
T |
 |
| Q |
261 |
ccactcttttaatactgaaaccactccaatatggtactaagaccactc |
308 |
Q |
| |
|
||| |||||||||| |||||||||| |||||||||||| ||||||| |
|
|
| T |
17556602 |
ccattcttttaatattgaaaccactttaatatggtactattaccactc |
17556649 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 65 - 298
Target Start/End: Complemental strand, 44926043 - 44925807
Alignment:
| Q |
65 |
tatctatcgaagttgttactagattgagtcaagaccaggtcgtcctctttaatacgtttcgtgacactg----aaattgtataaggccgactatcaacca |
160 |
Q |
| |
|
|||||| ||||||||||||||| |||||||| |||||||||| |||||||| |||||||||| ||||| ||||||| ||||| |||||||||||| |
|
|
| T |
44926043 |
tatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaaaacgtttcgtggcactgcccaaaattgtgcaaggcagactatcaacca |
44925944 |
T |
 |
| Q |
161 |
cgccgcctccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccttc-aatatggtactaag |
259 |
Q |
| |
|
||||||||||||||||||||||| ||| |||||||| |||||||||||| |||||||||||||||||||||||||||||||| || ||||||||||||| |
|
|
| T |
44925943 |
cgccgcctccaggataaaacaaggtcatctacaactatgcggttaacta-tgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaaa |
44925845 |
T |
 |
| Q |
260 |
accactcttttaatactgaaaccactccaatatggtact |
298 |
Q |
| |
|
||||||| |||||||||||||||||| |||||| |||| |
|
|
| T |
44925844 |
accactc-tttaatactgaaaccactttaatatgatact |
44925807 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 65 - 284
Target Start/End: Original strand, 1807447 - 1807671
Alignment:
| Q |
65 |
tatctatcgaagttgttactagattgagtcaagaccaggtcgtcctctttaatacgtttcgtgacactg----aaattgtataaggccgactatcaacca |
160 |
Q |
| |
|
|||||| ||||||||||||||| |||||||| ||| |||||| |||||||| |||||||||||||||| ||||||| ||||| |||||||||||| |
|
|
| T |
1807447 |
tatctaccgaagttgttactaggttgagtcacgactaggtcgctctctttaagacgtttcgtgacactgcccaaaattgtgcaaggcagactatcaacca |
1807546 |
T |
 |
| Q |
161 |
cgccgcctccaggataaaa-caagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccttc-aatatggtactaa |
258 |
Q |
| |
|
||||||||| ||||||||| ||||| |||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||| ||||||||||||| |
|
|
| T |
1807547 |
cgccgcctctaggataaaaacaagtccagctacaactgtgcggttaactagtgcactgtagaaaaccgttcgagatttacaccttcaaatatggtactaa |
1807646 |
T |
 |
| Q |
259 |
gaccactcttttaatactgaaaccac |
284 |
Q |
| |
|
|| ||||| ||||||||||||||||| |
|
|
| T |
1807647 |
gatcactc-tttaatactgaaaccac |
1807671 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 65 - 296
Target Start/End: Original strand, 36683554 - 36683789
Alignment:
| Q |
65 |
tatctatcgaagttgttactagattgagtcaagaccaggtcgtcctctttaatacgtttcgtgacactg----aaattgtataaggccgactatcaacca |
160 |
Q |
| |
|
|||||| || |||||||||||| |||||||| ||| |||||| |||||||| |||||||||| ||||| ||||||| |||||| |||||||||||| |
|
|
| T |
36683554 |
tatctaccggagttgttactaggttgagtcatgactaggtcgctctctttaagacgtttcgtggcactgcccaaaattgtgtaaggcagactatcaacca |
36683653 |
T |
 |
| Q |
161 |
cgccgcctccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccttc-aatatggtactaag |
259 |
Q |
| |
|
||| ||||||||||||||||||| ||||||||| ||||||| |||||||||||||||||||||| |||| |||||||||||| || |||||||||||||| |
|
|
| T |
36683654 |
cgctgcctccaggataaaacaaggtcagctacatctgtgcgattaactactgcactgtagaaaatcgtttgagaattacaccctcaaatatggtactaag |
36683753 |
T |
 |
| Q |
260 |
accactcttttaatactgaaaccactccaatatggta |
296 |
Q |
| |
|
||||||| ||||||||||||| |||| ||||||||| |
|
|
| T |
36683754 |
accactc-tttaatactgaaatcactttaatatggta |
36683789 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 65 - 285
Target Start/End: Original strand, 33416522 - 33416745
Alignment:
| Q |
65 |
tatctatcgaagttgttactagattgagtcaagaccaggtcgtcctctttaatacgtttcgtgacactg----aaattgtataaggccgactatcaacca |
160 |
Q |
| |
|
|||||| ||||||||||||||| |||||||| |||||||||| |||||||| |||||||||| ||||| ||||||| ||| | |||||||||||| |
|
|
| T |
33416522 |
tatctaccgaagttgttactaggttgagtcacgaccaggtcggtctctttaagacgtttcgtggcactgcccaaaattgtgcaagacagactatcaacca |
33416621 |
T |
 |
| Q |
161 |
cgccgcctccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccttc-aatatggtactaag |
259 |
Q |
| |
|
||||||||||| ||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| || |||| ||||||||| |
|
|
| T |
33416622 |
cgccgcctccaagataaaacaagcccagctacaactgtgcggttaacta-tgcactgtagaaaaccgttcgagaattacaccctcaaatacggtactaag |
33416720 |
T |
 |
| Q |
260 |
accactcttttaatactgaaaccact |
285 |
Q |
| |
|
||| ||| |||||||||||||||||| |
|
|
| T |
33416721 |
accgctc-tttaatactgaaaccact |
33416745 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 72 - 294
Target Start/End: Complemental strand, 40125998 - 40125772
Alignment:
| Q |
72 |
cgaagttgttactagattgagtcaagaccaggtcgtcctctttaatacgtttcgtgacactg----aaattgtataaggccgactatcaaccacgccgcc |
167 |
Q |
| |
|
||||||||||||||| |||||||| |||||| ||| |||||||| |||||||||| ||||| ||||||| ||||| ||||||||||||||||||| |
|
|
| T |
40125998 |
cgaagttgttactaggttgagtcacgaccagatcgctctctttaagacgtttcgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcc |
40125899 |
T |
 |
| Q |
168 |
tccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccttc-aatatggtactaagaccactc |
266 |
Q |
| |
|
|||| ||||||||||| ||||||||||||| || ||||||||||||| |||||||| |||||||||||||||||| | ||||||||||||||||||||| |
|
|
| T |
40125898 |
tccaagataaaacaagcccagctacaactgttcgattaactactgcaccgtagaaaatcgttcgagaattacacctccaaatatggtactaagaccactc |
40125799 |
T |
 |
| Q |
267 |
ttttaatactgaaaccactccaatatgg |
294 |
Q |
| |
|
|||||||||||||||||| ||||||| |
|
|
| T |
40125798 |
-tttaatactgaaaccactttaatatgg |
40125772 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 72 - 313
Target Start/End: Complemental strand, 18876479 - 18876235
Alignment:
| Q |
72 |
cgaagttgttactagattgagtcaagaccaggtcgtcctctttaatacgtttcgtgacactg----aaattgtataaggccgactatcaaccacgccgcc |
167 |
Q |
| |
|
||||||||||||||| |||||||| |||||||||| || ||||| |||||||||| ||||| ||||||| ||| | ||||||||||||||||||| |
|
|
| T |
18876479 |
cgaagttgttactaggttgagtcacgaccaggtcgctct-tttaagacgtttcgtggcactgcccaaaattgtgcaagacagactatcaaccacgccgcc |
18876381 |
T |
 |
| Q |
168 |
tccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccttc-aatatggtactaagaccactc |
266 |
Q |
| |
|
||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||| |||||| ||||||| |
|
|
| T |
18876380 |
tccaggataaaacaaactcatctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatgatactaataccactc |
18876281 |
T |
 |
| Q |
267 |
ttttaatactgaaaccactccaatatggtactaagaccactcaaata |
313 |
Q |
| |
|
||||||| ||||||||| |||||||| | |||||||||||||| |
|
|
| T |
18876280 |
-tttaatattgaaaccaccttaatatggtgttgagaccactcaaata |
18876235 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 65 - 298
Target Start/End: Complemental strand, 1911089 - 1910852
Alignment:
| Q |
65 |
tatctatcgaagttgttactagattgagtcaagaccaggtcgtcctctttaatacgtttcgtgacactg----aaattgtataaggccgactatcaacca |
160 |
Q |
| |
|
|||||||||||||||||| ||| || ||||| || ||||||| |||||||| |||||||||| |||| ||||||| || || |||||||||||| |
|
|
| T |
1911089 |
tatctatcgaagttgttattaggttaagtcacgatcaggtcgctctctttaagacgtttcgtggcactagtcaaaattgtgcaaagcagactatcaacca |
1910990 |
T |
 |
| Q |
161 |
cgccgcctccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccttc-aatatggtactaag |
259 |
Q |
| |
|
||| |||||||| |||||||||| ||| |||||||||||||||||||||||||||||||||||||| ||||||| |||||| ||| ||||||||| |||| |
|
|
| T |
1910989 |
cgctgcctccagtataaaacaagctcaactacaactgtgcggttaactactgcactgtagaaaaccattcgagatttacacattcaaatatggtattaag |
1910890 |
T |
 |
| Q |
260 |
accactcttttaatactgaaaccactccaatatggtact |
298 |
Q |
| |
|
||||||| |||||||||||||||||| ||||||||||| |
|
|
| T |
1910889 |
accactc-tttaatactgaaaccactttaatatggtact |
1910852 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #11
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 56 - 296
Target Start/End: Complemental strand, 23548761 - 23548515
Alignment:
| Q |
56 |
aaaagagaatatctatcgaagttgttactagattgagtcaagaccaggtcgtcctctttaatacgtttcgtgacactg----aaattgtataaggccgac |
151 |
Q |
| |
|
|||| |||||||||| ||||||||||||||| |||||||| |||| ||||| |||| ||| |||||||||| ||||| ||||||| ||||| ||| |
|
|
| T |
23548761 |
aaaatagaatatctaccgaagttgttactaggttgagtcacgacctggtcgctctctataagacgtttcgtggcactgtgtaaaattgtgcaaggcggac |
23548662 |
T |
 |
| Q |
152 |
tatcaaccacgccgcctccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattaca-ccttcaatat |
250 |
Q |
| |
|
||||||||||| |||||| ||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||| ||| || || |||| ||||| |
|
|
| T |
23548661 |
tatcaaccacgtcgcctctaggataaaacaagttcagctacaactgcgcggttaactactgcattgtagaaaaccgttcaagattttcacccttaaatat |
23548562 |
T |
 |
| Q |
251 |
ggtactaagaccactcttt-taatactgaaaccactccaatatggta |
296 |
Q |
| |
|
| ||||||||||||| ||| ||||||||||| |||| ||||||||| |
|
|
| T |
23548561 |
gatactaagaccactatttataatactgaaatcactttaatatggta |
23548515 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #12
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 65 - 269
Target Start/End: Original strand, 19166609 - 19166818
Alignment:
| Q |
65 |
tatctatcgaagttgttactagattgagtcaagaccaggtcgtcctctttaatacgtttcgtgacactg----aaattgtataaggccgactatcaacca |
160 |
Q |
| |
|
|||||| ||||||||||||||| |||||||| ||||| |||| |||||||| |||||||||| ||||| ||||||| | ||| |||||||||||| |
|
|
| T |
19166609 |
tatctaccgaagttgttactaggttgagtcacgaccatgtcgctctctttaagacgtttcgtggcactgcccaaaattgtgcacggcagactatcaacca |
19166708 |
T |
 |
| Q |
161 |
cgccgcctccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccttc-aatatggtactaag |
259 |
Q |
| |
|
||||||||||||||||||||||| ||| |||||||||||| ||||||||||||||| ||||||||||||||||||||||||| || |||||||||||||| |
|
|
| T |
19166709 |
cgccgcctccaggataaaacaagctcaactacaactgtgctgttaactactgcactatagaaaaccgttcgagaattacaccctcaaatatggtactaag |
19166808 |
T |
 |
| Q |
260 |
accactcttt |
269 |
Q |
| |
|
| || ||||| |
|
|
| T |
19166809 |
atcattcttt |
19166818 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #13
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 73 - 296
Target Start/End: Original strand, 34118449 - 34118676
Alignment:
| Q |
73 |
gaagttgttactagattgagtcaagaccaggtcgtcctctttaatacgtttcgtgacactg----aaattgtataaggccgactatcaaccacgccgcct |
168 |
Q |
| |
|
|||||||||||||| |||||||| |||||||||| |||||||| ||||||| || ||||| ||||||| ||||| |||||||||||||| ||||| |
|
|
| T |
34118449 |
gaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcatggcactgcccaaaattgtgcaaggcagactatcaaccacgtcgcct |
34118548 |
T |
 |
| Q |
169 |
ccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccttc-aatatggtactaagaccactct |
267 |
Q |
| |
|
||||||||||||| ||||||||||||||| |||||||||||||| ||||||||| |||||||| |||||||||| |||||||||||||| |||||| |
|
|
| T |
34118549 |
ttaggataaaacaagcccagctacaactgtgctgttaactactgcaccgtagaaaactgttcgagatttacaccttcgaatatggtactaaggccactc- |
34118647 |
T |
 |
| Q |
268 |
tttaatactgaaaccactccaatatggta |
296 |
Q |
| |
|
||||||| |||||||||| ||||||||| |
|
|
| T |
34118648 |
tttaataatgaaaccactttaatatggta |
34118676 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #14
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 5 - 285
Target Start/End: Original strand, 24090543 - 24090821
Alignment:
| Q |
5 |
ttgtttttggaattctaaattgttgtattttggtttttcaaattctattttaaaagagaatatctatcgaagttgttactagattgagtcaagaccaggt |
104 |
Q |
| |
|
||||||||||| |||||||||||||||||| | |||| ||||||| |||| ||| |||||||||| ||||||||||||||| |||||||| |||||||| |
|
|
| T |
24090543 |
ttgtttttggatttctaaattgttgtatttggactttt-aaattcttttttgaaaaagaatatctaccgaagttgttactaggttgagtcacgaccaggt |
24090641 |
T |
 |
| Q |
105 |
cgtcctctttaatacgtttcgtgacactg----aaattgtataaggccgactatcaaccacgccgcctccaggataaaacaagttcagctacaactgtgc |
200 |
Q |
| |
|
|| |||||||| |||||||||| ||||| || |||| ||||| || |||||| |||| |||||||| ||||||||||| | | |||||||||||| |
|
|
| T |
24090642 |
cgctctctttaagacgtttcgtggcactgcccaaagttgtgcaaggcagaatatcaatcacgtcgcctccaagataaaacaagcttatctacaactgtgc |
24090741 |
T |
 |
| Q |
201 |
ggttaactactgcactgtagaaaaccgttcgagaattaca-ccttcaatatggtactaagaccactcttttaatactgaaaccact |
285 |
Q |
| |
|
|||||||| | ||||||||||||||||||| ||||| ||| ||||| ||||||||||||||| ||||||| |||||||||| |
|
|
| T |
24090742 |
ggttaact-----attgtagaaaaccgttcgagatttacatcctcaaatattgtactaagaccactc-tttaatattgaaaccact |
24090821 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #15
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 66 - 241
Target Start/End: Complemental strand, 15875787 - 15875608
Alignment:
| Q |
66 |
atctatcgaagttgttactagattgagtcaagaccaggtcgtcctctttaatacgtttcgtgacactg----aaattgtataaggccgactatcaaccac |
161 |
Q |
| |
|
|||||||||||||||||||| ||||||| | |||||||||| ||||||| |||||||||| ||||| ||||||| ||||| ||||||||||||| |
|
|
| T |
15875787 |
atctatcgaagttgttactaaattgagttacgaccaggtcgctctctttaggacgtttcgtggcactgcccaaaattgtgcaaggcagactatcaaccac |
15875688 |
T |
 |
| Q |
162 |
gccgcctccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacac |
241 |
Q |
| |
|
|||||||||||||||||||||| |||||||||| ||| || |||||||||||||| ||||||||||||| |||||||||| |
|
|
| T |
15875687 |
gccgcctccaggataaaacaagctcagctacaattgtacgattaactactgcactatagaaaaccgttcaagaattacac |
15875608 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #16
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 158 - 308
Target Start/End: Complemental strand, 43302714 - 43302569
Alignment:
| Q |
158 |
ccacgccgcctccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccttcaatatggtacta |
257 |
Q |
| |
|
|||||||||||||||||||||||||| ||||| || |||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||| |
|
|
| T |
43302714 |
ccacgccgcctccaggataaaacaagcccagctgcacctgtgcggttaactactgcactgtagaaaatcgttcgagaattacaccttcaatgtggtacta |
43302615 |
T |
 |
| Q |
258 |
agaccactcttttaatactgaaaccactccaatatggtactaagaccactc |
308 |
Q |
| |
|
|||| |||||||||||| ||||| |||||||||||||| |||||||| |
|
|
| T |
43302614 |
agactactcttttaatattgaaa-----ccaatatggtactatgaccactc |
43302569 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #17
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 65 - 265
Target Start/End: Complemental strand, 38182356 - 38182152
Alignment:
| Q |
65 |
tatctatcgaagttgttactagattgagtcaagaccaggtcgtcctctttaatacgtttcgtgacactg----aaattgtataaggccgactatcaacca |
160 |
Q |
| |
|
|||||| |||||||||||| || |||||||| |||||||||| |||||||| |||||||||| |||| | ||||| ||||| || ||||||||| |
|
|
| T |
38182356 |
tatctaccgaagttgttac-aggttgagtcacgaccaggtcgctctctttaaaacgtttcgtggcacttcccaagattgtgcaaggcagattatcaacca |
38182258 |
T |
 |
| Q |
161 |
cgccgcctccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccttc-aatatggtactaag |
259 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||||| ||||||||||||||| || |||||||||||||| |||||||||| ||||||||||||| |
|
|
| T |
38182257 |
cgccgcctccaggataaaacaagcacagctacaactgtgctgttaactactgcactataaaaaaccgttcgagatttacaccttcaaatatggtactaaa |
38182158 |
T |
 |
| Q |
260 |
accact |
265 |
Q |
| |
|
|||||| |
|
|
| T |
38182157 |
accact |
38182152 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #18
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 5 - 269
Target Start/End: Original strand, 2965547 - 2965814
Alignment:
| Q |
5 |
ttgtttttggaattctaaattgttgtattttggtttttcaaattctatttt-aaaagagaatatctatcgaagttgttactagattgagtcaagaccagg |
103 |
Q |
| |
|
||||||||||| ||| ||| || ||||||| | ||| ||||||||||||| |||||| |||||| | | || |||||||||| | |||||| ||||||| |
|
|
| T |
2965547 |
ttgtttttggatttcgaaactgctgtattt-gaatttccaaattctattttgaaaaga-aatatccaccaaatttgttactaggt-gagtcacgaccagg |
2965643 |
T |
 |
| Q |
104 |
tcgtcctctttaatacgtttcgtgacactg----aaattgtataaggccgactatcaaccacgccgcctccaggataaaacaagttcagctacaactgtg |
199 |
Q |
| |
|
||| |||||||| |||||||||| ||||| ||||||| ||| | |||||||||||| ||||||| |||||||||||||| ||||||||||| || |
|
|
| T |
2965644 |
tcgctctctttaaaacgtttcgtggcactgcctaaaattgtgcaagacacactatcaaccacaccgcctctaggataaaacaagtccagctacaactatg |
2965743 |
T |
 |
| Q |
200 |
cggttaactactgcactgtagaaaaccgttcgagaattacaccttc-aatatggtactaagaccactcttt |
269 |
Q |
| |
|
| ||||||||||||||||||||||||| || |||| ||||||| || |||||||||||||||||||||||| |
|
|
| T |
2965744 |
cagttaactactgcactgtagaaaaccatttgagatttacaccctcaaatatggtactaagaccactcttt |
2965814 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #19
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 186 - 283
Target Start/End: Complemental strand, 4238336 - 4238239
Alignment:
| Q |
186 |
cagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccttcaatatggtactaagaccactcttttaatactgaaacca |
283 |
Q |
| |
|
||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
4238336 |
cagctacaactgttcgattaactactgcactgtagaaaaccgttcgagaattacaccttcaatatggtactaagaccaatcttttaatactgaaacca |
4238239 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #20
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 186 - 283
Target Start/End: Complemental strand, 4243075 - 4242978
Alignment:
| Q |
186 |
cagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccttcaatatggtactaagaccactcttttaatactgaaacca |
283 |
Q |
| |
|
||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
4243075 |
cagctacaactgttcgattaactactgcactgtagaaaaccgttcgagaattacaccttcaatatggtactaagaccaatcttttaatactgaaacca |
4242978 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #21
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 152 - 296
Target Start/End: Complemental strand, 15951584 - 15951440
Alignment:
| Q |
152 |
tatcaaccacgccgcctccaggataaaacaagttcagctacaactgtgcggttaactactgcact--gtagaaaaccgttcgagaattacaccttcaata |
249 |
Q |
| |
|
||||||||||||||||||||| |||||||||| ||||||||||||||| ||||||||||||||| |||||||||||||||||| |||||| ||| ||| |
|
|
| T |
15951584 |
tatcaaccacgccgcctccag-ataaaacaagcccagctacaactgtgcagttaactactgcactctgtagaaaaccgttcgagatttacacgttcgata |
15951486 |
T |
 |
| Q |
250 |
tggtactaagaccactcttttaatactgaaaccactccaatatggta |
296 |
Q |
| |
|
||||||||||||||||| ||||||||||||| |||| ||||||||| |
|
|
| T |
15951485 |
tggtactaagaccactc-tttaatactgaaatcactttaatatggta |
15951440 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #22
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 65 - 265
Target Start/End: Complemental strand, 28559774 - 28559570
Alignment:
| Q |
65 |
tatctatcgaagttgttactagattgagtcaagaccaggtcgtcctctttaatacgtttcgtgacactg----aaattgtataaggccgactatcaacca |
160 |
Q |
| |
|
|||||| ||||||||||||||| |||||||| ||| | |||| |||| ||| |||||||||| ||||| ||||||| ||||| ||||||||||| |
|
|
| T |
28559774 |
tatctaccgaagttgttactaggttgagtcacgacaatgtcgctctctataagacgtttcgtggcactgtccaaaattgtgcaaggcaaactatcaacca |
28559675 |
T |
 |
| Q |
161 |
cgccgcctccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccttcaatatggtactaaga |
260 |
Q |
| |
|
||||| || |||||||||| ||| ||| || |||||| || ||||||| ||||||||| ||||||||||||||||||||||||||||| |||| ||||| |
|
|
| T |
28559674 |
cgccgtctgcaggataaaataagcccagttagaactgttcgattaactattgcactgtaaaaaaccgttcgagaattacaccttcaatacggtagtaaga |
28559575 |
T |
 |
| Q |
261 |
ccact |
265 |
Q |
| |
|
||||| |
|
|
| T |
28559574 |
ccact |
28559570 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #23
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 9 - 247
Target Start/End: Complemental strand, 17954052 - 17953806
Alignment:
| Q |
9 |
ttttggaattctaaattgttgtattttggtttttcaaattctattttaaaagagaat----atctatcgaagttgttactagattgagtcaagaccaggt |
104 |
Q |
| |
|
||||||| ||| ||| ||||||||||||| ||||||||| ||||||| ||| | || ||||| ||||||||||||||| |||||| | ||||| || |
|
|
| T |
17954052 |
ttttggatttccaaactgttgtattttggattttcaaat-ctattttgaaaaatgattttcatctaccgaagttgttactaggttgagtaacgaccatgt |
17953954 |
T |
 |
| Q |
105 |
cgtcctctttaatacgtttcgtgacactg----aaattgtataaggccgactatcaaccacgccgcctccaggataaaacaagttcagctacaa-ctgtg |
199 |
Q |
| |
|
|| ||||||| |||||||||| ||||| ||||||| ||| | || |||||||||||||||||||| ||||||||||| ||| |||||| ||||| |
|
|
| T |
17953953 |
cgctttctttaagacgtttcgtggcactgcccaaaattgtgcaagacagaatatcaaccacgccgcctccaagataaaacaagctcacctacaaactgtg |
17953854 |
T |
 |
| Q |
200 |
cggttaactactgcactgtagaaaaccgttcgagaattacaccttcaa |
247 |
Q |
| |
|
| |||||||||||||||||||||| ||||||||||||||||| |||| |
|
|
| T |
17953853 |
tgattaactactgcactgtagaaaatcgttcgagaattacaccctcaa |
17953806 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #24
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 9 - 299
Target Start/End: Complemental strand, 24673500 - 24673216
Alignment:
| Q |
9 |
ttttggaattctaaattgttgtattttggtttttcaaattctattttaaaagagaatatctatcgaagttgttactagattgagtcaagaccaggtcgtc |
108 |
Q |
| |
|
||||||| || |||| |||||||||| ||||| ||||||||||||||||||||||||| |||||||||||||||||| |||||| | || ||| ||| |
|
|
| T |
24673500 |
ttttggatttttaaactgttgtatttaagtttt-caaattctattttaaaagagaatatttatcgaagttgttactaggttgagttacgatcagatcgct |
24673402 |
T |
 |
| Q |
109 |
ctctttaatacgtttcgtgacactg----aaattgtataaggccgactatcaaccacgccgcctccaggataaaacaagttcagctacaactgtgcggtt |
204 |
Q |
| |
|
|| ||||| |||||||||||||||| ||||| | ||| |||||||| |||| | | |||| |||||||||| | ||||||||||||| |
|
|
| T |
24673401 |
ctttttaaaacgtttcgtgacactgttcaaaattatgcaagatagactatcacccacaacacttccaaaataaaacaagct------caactgtgcggtt |
24673308 |
T |
 |
| Q |
205 |
aactactgcactgtagaaaaccgttcgagaattacaccttcaatatggtactaagaccactcttttaatactgaaaccactccaatatggtacta |
299 |
Q |
| |
|
||| ||| |||||| |||| |||| ||| |||||||| ||||||||||||||||||||| ||||||| ||||||||||| |||||||||||| |
|
|
| T |
24673307 |
aaccactacactgt--aaaagagttcaagatttacacctccaatatggtactaagaccact-ttttaatgttgaaaccactctaatatggtacta |
24673216 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #25
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 79 - 296
Target Start/End: Complemental strand, 28564927 - 28564705
Alignment:
| Q |
79 |
gttactagattgagtcaagaccaggtcgtcctctttaatacgtttcgtgacactg----aaattgtataaggccgactatcaaccacgccgcctccagga |
174 |
Q |
| |
|
|||||||| |||||||| || ||||||| |||| ||| || |||| |||||||| ||||||| ||| | |||||| |||||||||| || ||||| |
|
|
| T |
28564927 |
gttactaggttgagtcacgatcaggtcgctctctataaaacatttcatgacactgctcaaaattgttcaagacagactattaaccacgccgtctgcagga |
28564828 |
T |
 |
| Q |
175 |
ta--aaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccttcaatatggtactaagaccactcttttaa |
272 |
Q |
| |
|
|| ||||||| | | || |||||| || ||||||| |||| |||||||||||||||||||||||||||||||||||| || ||||||||||| ||||| |
|
|
| T |
28564827 |
tataaaacaagcccggttagaactgttcgattaactattgcagtgtagaaaaccgttcgagaattacaccttcaatatgatagtaagaccactc-tttaa |
28564729 |
T |
 |
| Q |
273 |
tactgaaaccactccaatatggta |
296 |
Q |
| |
|
| |||||||||| ||||||||| |
|
|
| T |
28564728 |
tgttgaaaccactttaatatggta |
28564705 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #26
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 79 - 296
Target Start/End: Complemental strand, 28572550 - 28572328
Alignment:
| Q |
79 |
gttactagattgagtcaagaccaggtcgtcctctttaatacgtttcgtgacactg----aaattgtataaggccgactatcaaccacgccgcctccagga |
174 |
Q |
| |
|
|||||||| |||||||| || ||||||| |||| ||| || |||| |||||||| ||||||| ||| | |||||| |||||||||| || ||||| |
|
|
| T |
28572550 |
gttactaggttgagtcacgatcaggtcgctctctataaaacatttcatgacactgctcaaaattgttcaagacagactattaaccacgccgtctgcagga |
28572451 |
T |
 |
| Q |
175 |
ta--aaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccttcaatatggtactaagaccactcttttaa |
272 |
Q |
| |
|
|| ||||||| | | || |||||| || ||||||| |||| |||||||||||||||||||||||||||||||||||| || ||||||||||| ||||| |
|
|
| T |
28572450 |
tataaaacaagcccggttagaactgttcgattaactattgcagtgtagaaaaccgttcgagaattacaccttcaatatgatagtaagaccactc-tttaa |
28572352 |
T |
 |
| Q |
273 |
tactgaaaccactccaatatggta |
296 |
Q |
| |
|
| |||||||||| ||||||||| |
|
|
| T |
28572351 |
tgttgaaaccactttaatatggta |
28572328 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #27
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 151 - 258
Target Start/End: Original strand, 10933497 - 10933603
Alignment:
| Q |
151 |
ctatcaaccacgccgcctccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccttcaatat |
250 |
Q |
| |
|
|||||||||||| |||||||| |||||||||| || ||||||||||| | ||||||||||||||||||| || |||||||||||||||||||||||| |
|
|
| T |
10933497 |
ctatcaaccacgtcgcctccatgataaaacaaac-caactacaactgtgtgattaactactgcactgtagagaattgttcgagaattacaccttcaatat |
10933595 |
T |
 |
| Q |
251 |
ggtactaa |
258 |
Q |
| |
|
| |||||| |
|
|
| T |
10933596 |
gatactaa |
10933603 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #28
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 150 - 219
Target Start/End: Original strand, 12820403 - 12820472
Alignment:
| Q |
150 |
actatcaaccacgccgcctccaggataaaacaagttcagctacaactgtgcggttaactactgcactgta |
219 |
Q |
| |
|
|||||||| ||| |||||||||||||||||||||||||| |||||||||||| |||||||||||||||| |
|
|
| T |
12820403 |
actatcaatcacaccgcctccaggataaaacaagttcaggtacaactgtgcgactaactactgcactgta |
12820472 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 86 - 247
Target Start/End: Original strand, 7902559 - 7902724
Alignment:
| Q |
86 |
gattgagtcaagaccaggtcgtcctctttaatacgtttcgtgacactg----aaattgtataaggccgactatcaaccacgccgcctccaggataaaaca |
181 |
Q |
| |
|
|||||||||| ||||| |||| |||||||| | ||||||||||| | |||||||||||| | | |||||||||||||| ||| ||||||||||| |
|
|
| T |
7902559 |
gattgagtcacgaccaagtcgctctctttaaaatgtttcgtgacattacccaaaattgtataagacatattatcaaccacgccgtctctaggataaaaca |
7902658 |
T |
 |
| Q |
182 |
agttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccttcaa |
247 |
Q |
| |
|
||| || | |||| |||||| ||||||||| ||||||| ||| ||||||||||||| |||||| |
|
|
| T |
7902659 |
agtccatcaacaattgtgcgattaactactacactgtatctaactattcgagaattacaacttcaa |
7902724 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #30
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 73 - 183
Target Start/End: Complemental strand, 43302831 - 43302716
Alignment:
| Q |
73 |
gaagttgttactagattgagtcaagaccaggtcgtcctctttaatacgtttcgtgacactg-----aaattgtataaggccgactatcaaccacgccgcc |
167 |
Q |
| |
|
|||||||||| ||| ||||| | |||| |||||| |||||||| |||||||||| ||||| ||||||| |||| ||||||||||||||||||| |
|
|
| T |
43302831 |
gaagttgttattaggctgagttacgacccggtcgttctctttaagacgtttcgtggcactgtccaaaaattgtgcaaggtagactatcaaccacgccgcc |
43302732 |
T |
 |
| Q |
168 |
tccaggataaaacaag |
183 |
Q |
| |
|
|||||||||||||||| |
|
|
| T |
43302731 |
tccaggataaaacaag |
43302716 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #31
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 65 - 159
Target Start/End: Complemental strand, 4243174 - 4243076
Alignment:
| Q |
65 |
tatctatcgaagttgttactagattgagtcaagaccaggtcgtcctctttaatacgtttcgtgacactg----aaattgtataaggccgactatcaacc |
159 |
Q |
| |
|
|||||||||||||||||||||| |||||||| |||||||||| |||||||| ||||||| || ||||| ||||||| ||||| ||||||||||| |
|
|
| T |
4243174 |
tatctatcgaagttgttactaggttgagtcacgaccaggtcgctctctttaacacgtttcatggcactgcccaaaattgtgcaaggcagactatcaacc |
4243076 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 65 - 133
Target Start/End: Complemental strand, 40130806 - 40130738
Alignment:
| Q |
65 |
tatctatcgaagttgttactagattgagtcaagaccaggtcgtcctctttaatacgtttcgtgacactg |
133 |
Q |
| |
|
|||||| ||||||||||||||| |||||||| |||||||||| |||||||| |||||||||| ||||| |
|
|
| T |
40130806 |
tatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactg |
40130738 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 65 - 159
Target Start/End: Complemental strand, 4238435 - 4238337
Alignment:
| Q |
65 |
tatctatcgaagttgttactagattgagtcaagaccaggtcgtcctctttaatacgtttcgtgacactg----aaattgtataaggccgactatcaacc |
159 |
Q |
| |
|
|||||| ||||||||||||||| |||||||| |||||||||| |||||||| ||||||| || ||||| ||||||| ||||| ||||||||||| |
|
|
| T |
4238435 |
tatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaacacgtttcatggcactgcccaaaattgtgcaaggcagactatcaacc |
4238337 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #34
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 218 - 285
Target Start/End: Original strand, 17020470 - 17020537
Alignment:
| Q |
218 |
tagaaaaccgttcgagaattacaccttc-aatatggtactaagaccactcttttaatactgaaaccact |
285 |
Q |
| |
|
|||||||||||| |||| |||||| ||| ||||||||||||||||||||| ||||||| |||||||||| |
|
|
| T |
17020470 |
tagaaaaccgtttgagatttacacattcgaatatggtactaagaccactc-tttaatattgaaaccact |
17020537 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #35
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 218 - 285
Target Start/End: Original strand, 17550907 - 17550974
Alignment:
| Q |
218 |
tagaaaaccgttcgagaattacaccttc-aatatggtactaagaccactcttttaatactgaaaccact |
285 |
Q |
| |
|
|||||||||||| |||| |||||| ||| ||||||||||||||||||||| ||||||| |||||||||| |
|
|
| T |
17550907 |
tagaaaaccgtttgagatttacacattcgaatatggtactaagaccactc-tttaatattgaaaccact |
17550974 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 43 - 93
Target Start/End: Complemental strand, 22714991 - 22714941
Alignment:
| Q |
43 |
caaattctattttaaaagagaatatctatcgaagttgttactagattgagt |
93 |
Q |
| |
|
|||||||||| ||||||||||||||||| ||||||||||| ||| |||||| |
|
|
| T |
22714991 |
caaattctatattaaaagagaatatctaccgaagttgttattaggttgagt |
22714941 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 246 - 293
Target Start/End: Original strand, 7001849 - 7001896
Alignment:
| Q |
246 |
aatatggtactaagaccactcttttaatactgaaaccactccaatatg |
293 |
Q |
| |
|
||||| |||| |||||||||||||||||||||||| ||||| |||||| |
|
|
| T |
7001849 |
aatatagtacaaagaccactcttttaatactgaaatcactctaatatg |
7001896 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 152 - 299
Target Start/End: Original strand, 27415577 - 27415726
Alignment:
| Q |
152 |
tatcaaccacgccgcctccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccttcaatatg |
251 |
Q |
| |
|
||||||||||| ||||| ||| |||||||||| | |||||| |||||| |||| || |||| |||| || ||||| | |||||||| | || |||| |
|
|
| T |
27415577 |
tatcaaccacgtcgccttcagaataaaacaagcataactacaattgtgcgattaaatattgcatcgtagctaatcgttcaaaaattacacatccactatg |
27415676 |
T |
 |
| Q |
252 |
gtactaagaccactctt--ttaatactgaaaccactccaatatggtacta |
299 |
Q |
| |
|
||||||||||||| ||| |||||| ||||||| || | |||||||||| |
|
|
| T |
27415677 |
gtactaagaccacacttaattaataacgaaaccaatcaattatggtacta |
27415726 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 246 - 283
Target Start/End: Complemental strand, 34818634 - 34818598
Alignment:
| Q |
246 |
aatatggtactaagaccactcttttaatactgaaacca |
283 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
34818634 |
aatatggtactaagaccactc-tttaatactgaaacca |
34818598 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 145; Significance: 3e-76; HSPs: 40)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 5 - 283
Target Start/End: Complemental strand, 12045307 - 12045037
Alignment:
| Q |
5 |
ttgtttttggaattctaaattgttgtattttggtttttcaaattctattttaaaagagaatatctatcgaagttgttactagattgagtcaagaccaggt |
104 |
Q |
| |
|
||||||||||| ||| ||| ||||||||||||||||| ||||||||||| ||||| ||||||||||||||| |||||||| |||||||| |
|
|
| T |
12045307 |
ttgtttttggatttccaaactgttgtattttggttttccaaattctatt------------atctaccgaagttgttactaggttgagtcacgaccaggt |
12045220 |
T |
 |
| Q |
105 |
cgtcctctttaatacgtttcgtgacactg----aaattgtataaggccgactatcaaccacgccgcctccaggataaaacaagttcagctacaactgtgc |
200 |
Q |
| |
|
|| ||||||||| |||||||||| ||||| ||||||| ||| | ||||||| ||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
12045219 |
cgccctctttaagacgtttcgtggcactgcccaaaattgtgcaagacagactatcgaccacgccgcctccaggataaaacaagcatagctacaactgtgc |
12045120 |
T |
 |
| Q |
201 |
ggttaactactgcactgtagaaaaccgttcgagaattacaccttcaatatggtactaagaccactcttttaatactgaaacca |
283 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
12045119 |
ggttaactactgcactgtagactaccgttcgagaattacaccttcaatatggtactaagaccactcttttaatactgaaacca |
12045037 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 65 - 283
Target Start/End: Complemental strand, 36942385 - 36942163
Alignment:
| Q |
65 |
tatctatcgaagttgttactagattgagtcaagaccaggtcgtcctctttaatacgtttcgtgacactg----aaattgtataaggccgactatcaacca |
160 |
Q |
| |
|
|||||| ||||||||||||||| |||||||| |||||||||| |||||||| ||||||| || ||||| ||||||| ||||| |||||||||||| |
|
|
| T |
36942385 |
tatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcatggcactgcccaaaattgtgcaaggcagactatcaacca |
36942286 |
T |
 |
| Q |
161 |
cgccgcctccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccttcaatatggtactaaga |
260 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
36942285 |
cgccgcctccaggataaaacaagcccagctacaactgttcgattaactactgcactgtagaaaaccgttcgagaattacaccttcaatatggtactaaga |
36942186 |
T |
 |
| Q |
261 |
ccactcttttaatactgaaacca |
283 |
Q |
| |
|
||| ||||||||||||||||||| |
|
|
| T |
36942185 |
ccaatcttttaatactgaaacca |
36942163 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 141; E-Value: 7e-74
Query Start/End: Original strand, 5 - 283
Target Start/End: Original strand, 3665859 - 3666129
Alignment:
| Q |
5 |
ttgtttttggaattctaaattgttgtattttggtttttcaaattctattttaaaagagaatatctatcgaagttgttactagattgagtcaagaccaggt |
104 |
Q |
| |
|
||||||||||| ||| ||| ||||||||||||||||||||||||||||||| ||| ||||||||||||||| |||||||| ||| |||| |
|
|
| T |
3665859 |
ttgtttttggatttccaaactgttgtattttggtttttcaaattctatttt------------ctaccgaagttgttactaggttgagtcacgactaggt |
3665946 |
T |
 |
| Q |
105 |
cgtcctctttaatacgtttcgtgacactg----aaattgtataaggccgactatcaaccacgccgcctccaggataaaacaagttcagctacaactgtgc |
200 |
Q |
| |
|
|| ||||| || |||||||||| ||||| ||||||| ||||| |||||||||||||||| |||| |||||||||||||| || |||||||||||| |
|
|
| T |
3665947 |
cgctctcttcaagacgtttcgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccacctctaggataaaacaagtccaactacaactgtgc |
3666046 |
T |
 |
| Q |
201 |
ggttaactactgcactgtagaaaaccgttcgagaattacaccttcaatatggtactaagaccactcttttaatactgaaacca |
283 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
3666047 |
ggttaactactgcactgtagaaaaccgttcgggaattacaccttcaatatggtactaataccactcttttaatactgaaacca |
3666129 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 65 - 283
Target Start/End: Complemental strand, 36937631 - 36937409
Alignment:
| Q |
65 |
tatctatcgaagttgttactagattgagtcaagaccaggtcgtcctctttaatacgtttcgtgacactg----aaattgtataaggccgactatcaacca |
160 |
Q |
| |
|
|||||| ||||||||||| ||| |||||||| |||||||||| |||||||| ||||||| || ||||| ||||||| ||||| |||||||||||| |
|
|
| T |
36937631 |
tatctaccgaagttgttattaggttgagtcacgaccaggtcgctctctttaagacgtttcatggcactgcccaaaattgtgcaaggcagactatcaacca |
36937532 |
T |
 |
| Q |
161 |
cgccgcctccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccttcaatatggtactaaga |
260 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
36937531 |
cgccgcctccaggataaaacaagcccagctacaactgttcgattaactactgcactgtagaaaaccgttcgagaattacaccttcaatatggtactaaga |
36937432 |
T |
 |
| Q |
261 |
ccactcttttaatactgaaacca |
283 |
Q |
| |
|
||| ||||||||||||||||||| |
|
|
| T |
36937431 |
ccaatcttttaatactgaaacca |
36937409 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 88 - 308
Target Start/End: Complemental strand, 32461646 - 32461427
Alignment:
| Q |
88 |
ttgagtcaagaccaggtcgtcctctttaatacgtttcgtgacactg----aaattgtataaggccgactatcaaccacgccgcctccaggataaaacaag |
183 |
Q |
| |
|
|||||||| |||||||||| |||||||| |||||| ||| ||||| ||||||| ||| | ||||||||||||||||||||||||||||||||||| |
|
|
| T |
32461646 |
ttgagtcacgaccaggtcgctctctttaagacgttttgtggcactgcccaaaattgtgcaagacagactatcaaccacgccgcctccaggataaaacaag |
32461547 |
T |
 |
| Q |
184 |
ttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccttcaatatggtactaagaccactcttttaatactgaaacca |
283 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
32461546 |
ttcagctgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccttcaatatggtactaagaccactcttttaatgctgaaa--- |
32461450 |
T |
 |
| Q |
284 |
ctccaatatggtactaagaccactc |
308 |
Q |
| |
|
|||||||||||||| |||||||| |
|
|
| T |
32461449 |
--ccaatatggtactatgaccactc |
32461427 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 65 - 294
Target Start/End: Original strand, 39523024 - 39523257
Alignment:
| Q |
65 |
tatctatcgaagttgttactagattgagtcaagaccaggtcgtcctctttaatacgtttcgtgacactg----aaattgtataaggccgactatcaacca |
160 |
Q |
| |
|
|||||||||||||||||||||| |||||||| |||||||||| |||||||| |||||||||| ||| | ||||||| ||| | |||||||||||| |
|
|
| T |
39523024 |
tatctatcgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaccgcccaaaattgtgcaagacagactatcaacca |
39523123 |
T |
 |
| Q |
161 |
cgccgcctccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccttc-aatatggtactaag |
259 |
Q |
| |
|
|||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||| | |||||||||||||| |
|
|
| T |
39523124 |
cgccgcctccaggataaaacaagtccagctgcaactgtgcggttaactactgcactgtagaaaaccgttcaagaattacacctccaaatatggtactaag |
39523223 |
T |
 |
| Q |
260 |
accactcttttaatactgaaaccactccaatatgg |
294 |
Q |
| |
|
||||||| |||||||||||||||||| ||||||| |
|
|
| T |
39523224 |
accactc-tttaatactgaaaccactttaatatgg |
39523257 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 65 - 284
Target Start/End: Original strand, 7451733 - 7451956
Alignment:
| Q |
65 |
tatctatcgaagttgttactagattgagtcaagaccaggtcgtcctctttaatacgtttcgtgacactg----aaattgtataaggccgactatcaacca |
160 |
Q |
| |
|
|||||| ||||||||||||||| |||||||| |||||||||| |||||||| |||||||||| ||||| ||||||| ||||| |||||||||||| |
|
|
| T |
7451733 |
tatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgtccaaaattgtgcaaggcagactatcaacca |
7451832 |
T |
 |
| Q |
161 |
cgccgcctccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccttc-aatatggtactaag |
259 |
Q |
| |
|
||| ||||||||||||||||||| |||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||| | |||||||||||||| |
|
|
| T |
7451833 |
cgctgcctccaggataaaacaagctcagctgcaactgtgcggttaactactacactgtagaaaaccgttcgagaattacacctccaaatatggtactaag |
7451932 |
T |
 |
| Q |
260 |
accactcttttaatactgaaaccac |
284 |
Q |
| |
|
||||||| ||||||||||||||||| |
|
|
| T |
7451933 |
accactc-tttaatactgaaaccac |
7451956 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 65 - 294
Target Start/End: Original strand, 39518385 - 39518618
Alignment:
| Q |
65 |
tatctatcgaagttgttactagattgagtcaagaccaggtcgtcctctttaatacgtttcgtgacactg----aaattgtataaggccgactatcaacca |
160 |
Q |
| |
|
|||||||||||||||||||||| |||||||| |||||||||| |||||||| |||||||||| ||| | ||||||| | ||| |||||||||||| |
|
|
| T |
39518385 |
tatctatcgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaccgcccaaaattgtgcatggcagactatcaacca |
39518484 |
T |
 |
| Q |
161 |
cgccgcctccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccttc-aatatggtactaag |
259 |
Q |
| |
|
|||||||||||||||||||||||| ||||| ||||||||||||||||||||||| ||||||||||||||| |||||||||||| | |||||||||||||| |
|
|
| T |
39518485 |
cgccgcctccaggataaaacaagtccagctgcaactgtgcggttaactactgcagtgtagaaaaccgttcaagaattacacctccaaatatggtactaag |
39518584 |
T |
 |
| Q |
260 |
accactcttttaatactgaaaccactccaatatgg |
294 |
Q |
| |
|
||||||| |||||||||||||||||| ||||||| |
|
|
| T |
39518585 |
accactc-tttaatactgaaaccactttaatatgg |
39518618 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 65 - 283
Target Start/End: Original strand, 42001409 - 42001626
Alignment:
| Q |
65 |
tatctatcgaagttgttactagattgagtcaagaccaggtcgtcctctttaatacgtttcgtgacactg----aaattgtataaggccgactatcaacca |
160 |
Q |
| |
|
|||||| ||||||||||||||| |||||||| |||||||||| |||||||| |||||||||| ||||| ||||||| |||| | |||||||||||| |
|
|
| T |
42001409 |
tatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattgtgtaagacagactatcaacca |
42001508 |
T |
 |
| Q |
161 |
cgccgcctccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccttcaatatggtactaaga |
260 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
42001509 |
cgccgcctccaggataaaacaagcccagctacaactgtgcggttaactactg-----tagaaaaccgttcgagaattacaccttcaatatggtactaaga |
42001603 |
T |
 |
| Q |
261 |
ccactcttttaatactgaaacca |
283 |
Q |
| |
|
||| |||||||| |||||||||| |
|
|
| T |
42001604 |
ccaatcttttaacactgaaacca |
42001626 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 65 - 296
Target Start/End: Original strand, 26667247 - 26667482
Alignment:
| Q |
65 |
tatctatcgaagttgttactagattgagtcaagaccaggtcgtcctctttaatacgtttcgtgacactg----aaattgtataaggccgactatcaacca |
160 |
Q |
| |
|
|||||| ||||||||||||||| |||||||| |||||||||| |||||||| |||||||||| ||||| ||||||| ||||| |||||||||||| |
|
|
| T |
26667247 |
tatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattgtgcaaggcagactatcaacca |
26667346 |
T |
 |
| Q |
161 |
cgccgcctccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccttc-aatatggtactaag |
259 |
Q |
| |
|
|||||||||||||||||||||||| ||||| ||||||| || |||||||||||||| ||||||| |||||||||||||||||| | |||||||||||||| |
|
|
| T |
26667347 |
cgccgcctccaggataaaacaagtccagctgcaactgttcgattaactactgcactctagaaaatcgttcgagaattacacctccaaatatggtactaag |
26667446 |
T |
 |
| Q |
260 |
accactcttttaatactgaaaccactccaatatggta |
296 |
Q |
| |
|
||||||| |||||||||||||||||| ||||||||| |
|
|
| T |
26667447 |
accactc-tttaatactgaaaccactttaatatggta |
26667482 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 65 - 296
Target Start/End: Original strand, 26938844 - 26939079
Alignment:
| Q |
65 |
tatctatcgaagttgttactagattgagtcaagaccaggtcgtcctctttaatacgtttcgtgacactg----aaattgtataaggccgactatcaacca |
160 |
Q |
| |
|
|||||| ||||||||||||||| |||||||| |||||||||| |||||||| |||||||||| ||||| ||||||| ||||| |||||||||||| |
|
|
| T |
26938844 |
tatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattgtgcaaggcagactatcaacca |
26938943 |
T |
 |
| Q |
161 |
cgccgcctccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccttc-aatatggtactaag |
259 |
Q |
| |
|
|||||||||||||||||||||||| ||||| ||||||| || |||||||||||||| ||||||| |||||||||||||||||| | |||||||||||||| |
|
|
| T |
26938944 |
cgccgcctccaggataaaacaagtccagctgcaactgttcgattaactactgcactctagaaaatcgttcgagaattacacctccaaatatggtactaag |
26939043 |
T |
 |
| Q |
260 |
accactcttttaatactgaaaccactccaatatggta |
296 |
Q |
| |
|
||||||| |||||||||||||||||| ||||||||| |
|
|
| T |
26939044 |
accactc-tttaatactgaaaccactttaatatggta |
26939079 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 65 - 296
Target Start/End: Complemental strand, 29168093 - 29167858
Alignment:
| Q |
65 |
tatctatcgaagttgttactagattgagtcaagaccaggtcgtcctctttaatacgtttcgtgacactg----aaattgtataaggccgactatcaacca |
160 |
Q |
| |
|
|||||| ||||||||||||||| |||||||| |||||||||| |||||||| |||||||||| ||||| ||||||| ||||| |||||||||||| |
|
|
| T |
29168093 |
tatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattgtgcaaggcagactatcaacca |
29167994 |
T |
 |
| Q |
161 |
cgccgcctccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccttc-aatatggtactaag |
259 |
Q |
| |
|
||||||||||||||||||||||| || |||||||||| || |||||||||||||||||||||| |||||||||||||||||| | |||||||||||||| |
|
|
| T |
29167993 |
cgccgcctccaggataaaacaagcccaactacaactgttcgattaactactgcactgtagaaaatcgttcgagaattacacctccaaatatggtactaag |
29167894 |
T |
 |
| Q |
260 |
accactcttttaatactgaaaccactccaatatggta |
296 |
Q |
| |
|
||||||| |||||||||||||||||| ||||||||| |
|
|
| T |
29167893 |
accactc-tttaatactgaaaccactttaatatggta |
29167858 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 65 - 295
Target Start/End: Complemental strand, 41587280 - 41587048
Alignment:
| Q |
65 |
tatctatcgaagttgttactagattgagtcaagaccaggtcgtcctctttaatacgtttcgtgacactg----aaattgtataaggccgactatcaacca |
160 |
Q |
| |
|
|||||| ||||||||||||||| |||||||| |||||||| | |||||||| |||||||||||||||| ||||||| ||| | |||||||||||| |
|
|
| T |
41587280 |
tatctaccgaagttgttactagtttgagtcacgaccaggttgctctctttaagacgtttcgtgacactgttcaaaattgtgcaagacagactatcaacca |
41587181 |
T |
 |
| Q |
161 |
cgccgcctccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccttc-aatatggtactaag |
259 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| || |||||||||||||| |
|
|
| T |
41587180 |
cgccgcctccaggataaaacaagctcagctacaactgtgcggttaactactgcactgtagaaaaccgttc--gaattacaccctcaaatatggtactaag |
41587083 |
T |
 |
| Q |
260 |
accactcttttaatactgaaaccactccaatatggt |
295 |
Q |
| |
|
||||||| ||||| |||||||||||| |||||||| |
|
|
| T |
41587082 |
accactc-tttaacactgaaaccactttaatatggt |
41587048 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #14
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 65 - 283
Target Start/End: Original strand, 556670 - 556892
Alignment:
| Q |
65 |
tatctatcgaagttgttactagattgagtcaagaccaggtcgtcctctttaatacgtttcgtgacactg----aaattgtataaggccgactatcaacca |
160 |
Q |
| |
|
|||||| ||||||||||||||| |||||||| |||||||||| |||||||| |||||| ||| ||||| ||||||| ||||| |||||||||||| |
|
|
| T |
556670 |
tatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgttttgtggcactgcccaaaattgtgcaaggcagactatcaacca |
556769 |
T |
 |
| Q |
161 |
cgccgcctccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccttc-aatatggtactaag |
259 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||||| || ||||||||||||||||||||||||||||||||||||||||| | |||||||||||||| |
|
|
| T |
556770 |
cgccgcctccaggataaaacaagctcagctacaactgttcgattaactactgcactgtagaaaaccgttcgagaattacacctccaaatatggtactaag |
556869 |
T |
 |
| Q |
260 |
accactcttttaatactgaaacca |
283 |
Q |
| |
|
||||||| | |||||||||||||| |
|
|
| T |
556870 |
accactc-tataatactgaaacca |
556892 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #15
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 65 - 283
Target Start/End: Original strand, 561442 - 561664
Alignment:
| Q |
65 |
tatctatcgaagttgttactagattgagtcaagaccaggtcgtcctctttaatacgtttcgtgacactg----aaattgtataaggccgactatcaacca |
160 |
Q |
| |
|
|||||| ||||||||||||||| |||||||| |||||||||| |||||||| |||||| ||| ||||| ||||||| ||||| |||||||||||| |
|
|
| T |
561442 |
tatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgttttgtggcactgcccaaaattgtgcaaggcagactatcaacca |
561541 |
T |
 |
| Q |
161 |
cgccgcctccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccttc-aatatggtactaag |
259 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||||| || ||||||||||||||||||||||||||||||||||||||||| | |||||||||||||| |
|
|
| T |
561542 |
cgccgcctccaggataaaacaagctcagctacaactgttcgattaactactgcactgtagaaaaccgttcgagaattacacctccaaatatggtactaag |
561641 |
T |
 |
| Q |
260 |
accactcttttaatactgaaacca |
283 |
Q |
| |
|
||||||| | |||||||||||||| |
|
|
| T |
561642 |
accactc-tataatactgaaacca |
561664 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #16
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 65 - 283
Target Start/End: Original strand, 41996640 - 41996857
Alignment:
| Q |
65 |
tatctatcgaagttgttactagattgagtcaagaccaggtcgtcctctttaatacgtttcgtgacactg----aaattgtataaggccgactatcaacca |
160 |
Q |
| |
|
|||||| ||||||||||||||| |||||||| |||||||| | |||||||| |||||||||| ||||| ||||||| |||| | |||||||||||| |
|
|
| T |
41996640 |
tatctaccgaagttgttactaggttgagtcacgaccaggttgctctctttaagacgtttcgtggcactgcccaaaattgtgtaagacagactatcaacca |
41996739 |
T |
 |
| Q |
161 |
cgccgcctccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccttcaatatggtactaaga |
260 |
Q |
| |
|
||||||||||||||||||||||| || |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
41996740 |
cgccgcctccaggataaaacaagcccaactacaactgtgcggttaactactg-----tagaaaaccgttcgagaattacaccttcaatatggtactaaga |
41996834 |
T |
 |
| Q |
261 |
ccactcttttaatactgaaacca |
283 |
Q |
| |
|
||| |||||||| |||||||||| |
|
|
| T |
41996835 |
ccaatcttttaacactgaaacca |
41996857 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #17
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 65 - 285
Target Start/End: Complemental strand, 6155539 - 6155315
Alignment:
| Q |
65 |
tatctatcgaagttgttactagattgagtcaagaccaggtcgtcctctttaatacgtttcgtgacactg----aaattgtataaggccgactatcaacca |
160 |
Q |
| |
|
|||||| |||| |||||||||| |||||||| || ||||||| |||||||| |||||||||| ||||| ||||| || ||| | |||||||||||| |
|
|
| T |
6155539 |
tatctaccgaaattgttactaggttgagtcacgatcaggtcgctctctttaagacgtttcgtggcactgtccaaaattttacaagacagactatcaacca |
6155440 |
T |
 |
| Q |
161 |
cgccgcctccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccttc-aatatggtactaag |
259 |
Q |
| |
|
| ||||||||||||||||||||| ||||||||||||| || ||||||||||||||||||||||||||||||||||||||||| | |||||||||||||| |
|
|
| T |
6155439 |
caccgcctccaggataaaacaagcccagctacaactgttcgattaactactgcactgtagaaaaccgttcgagaattacacctccaaatatggtactaag |
6155340 |
T |
 |
| Q |
260 |
accactcttttaatactgaaaccact |
285 |
Q |
| |
|
||||||| |||||||||||||||||| |
|
|
| T |
6155339 |
accactc-tttaatactgaaaccact |
6155315 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #18
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 65 - 285
Target Start/End: Original strand, 12103000 - 12103224
Alignment:
| Q |
65 |
tatctatcgaagttgttactagattgagtcaagaccaggtcgtcctctttaatacgtttcgtgacactg----aaattgtataaggccgactatcaacca |
160 |
Q |
| |
|
|||||| ||||||||||||||| |||||| | |||||||||| |||||||| |||||||||| ||||| ||||||| ||||| |||||||||||| |
|
|
| T |
12103000 |
tatctaccgaagttgttactaggttgagttacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattgtgcaaggcagactatcaacca |
12103099 |
T |
 |
| Q |
161 |
cgccgcctccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattaca-ccttcaatatggtactaag |
259 |
Q |
| |
|
||||||||||||||||||||||| || |||||| |||||| |||||||||||||||||||||| ||||||||||||||| |||| |||||||||||||| |
|
|
| T |
12103100 |
cgccgcctccaggataaaacaagcccaactacaaatgtgcgattaactactgcactgtagaaaatcgttcgagaattacacccttaaatatggtactaag |
12103199 |
T |
 |
| Q |
260 |
accactcttttaatactgaaaccact |
285 |
Q |
| |
|
| ||||| |||||||||||||||||| |
|
|
| T |
12103200 |
atcactc-tttaatactgaaaccact |
12103224 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #19
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 73 - 298
Target Start/End: Complemental strand, 12502011 - 12501782
Alignment:
| Q |
73 |
gaagttgttactagattgagtcaagaccaggtcgtcctctttaatacgtttcgtgacactg----aaattgtataaggccgactatcaaccacgccgcct |
168 |
Q |
| |
|
|||||||||||||| |||||||| |||||||||| |||||||| |||||||||| ||||| ||||||| || | |||||||||||||||||||| |
|
|
| T |
12502011 |
gaagttgttactaggttgagtcatgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattgtgcaaaacagactatcaaccacgccgcct |
12501912 |
T |
 |
| Q |
169 |
ccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccttc-aatatggtactaagaccactct |
267 |
Q |
| |
|
||||||||||||||| ||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||| | |||||| ||||||||||||| |
|
|
| T |
12501911 |
ccaggataaaacaagcccagctacaactgttcggttaactactgcactgtagaaaatcgttcgagaattacacctccaaatatgatactaagaccact-a |
12501813 |
T |
 |
| Q |
268 |
tttaatactgaaaccactccaatatggtact |
298 |
Q |
| |
|
|||||||| ||||||||| ||||||||||| |
|
|
| T |
12501812 |
tttaataccgaaaccactttaatatggtact |
12501782 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #20
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 65 - 285
Target Start/End: Complemental strand, 37248915 - 37248692
Alignment:
| Q |
65 |
tatctatcgaagttgttactagattgagtcaagaccaggtcgtcctctttaatacgtttcgtgacactg----aaattgtataaggccgactatcaacca |
160 |
Q |
| |
|
|||||| ||||||||||||||| |||||||| |||||||||| |||||||| || ||||||| |||| ||||||| ||||| |||||||||||| |
|
|
| T |
37248915 |
tatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacatttcgtggcactacctaaaattgtgcaaggcagactatcaacca |
37248816 |
T |
 |
| Q |
161 |
cgccgcctccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccttc-aatatggtactaag |
259 |
Q |
| |
|
||||||||||||||||||||||| ||||| ||||||||||||||| ||||| ||| ||||||||||||||||||||||||| || |||||||||||||| |
|
|
| T |
37248815 |
cgccgcctccaggataaaacaagcccagctgcaactgtgcggttaa-tactgtactatagaaaaccgttcgagaattacaccctcaaatatggtactaag |
37248717 |
T |
 |
| Q |
260 |
accactcttttaatactgaaaccact |
285 |
Q |
| |
|
||||||| |||||||||||||||||| |
|
|
| T |
37248716 |
accactc-tttaatactgaaaccact |
37248692 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #21
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 65 - 296
Target Start/End: Original strand, 36428684 - 36428919
Alignment:
| Q |
65 |
tatctatcgaagttgttactagattgagtcaagaccaggtcgtcctctttaatacgtttcgtgacactg----aaattgtataaggccgactatcaacca |
160 |
Q |
| |
|
|||||| ||||||||||||||| |||||||| |||||||||| |||||||| |||||| | | |||| ||||||| ||||| |||||||||||| |
|
|
| T |
36428684 |
tatctaacgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgttttgcggaactgcccaaaattgtgcaaggcagactatcaacca |
36428783 |
T |
 |
| Q |
161 |
cgccgcctccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccttc-aatatggtactaag |
259 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||| || |||||||||||||||||||||| || ||||||||||||||| | |||||||| ||||| |
|
|
| T |
36428784 |
cgccgcctccaggataaaacaagcccagctacaactgttcgattaactactgcactgtagaaaatcgctcgagaattacacctccaaatatggttctaag |
36428883 |
T |
 |
| Q |
260 |
accactcttttaatactgaaaccactccaatatggta |
296 |
Q |
| |
|
||||||| |||||||||||||||||| ||||||||| |
|
|
| T |
36428884 |
accactc-tttaatactgaaaccactttaatatggta |
36428919 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #22
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 65 - 285
Target Start/End: Complemental strand, 6514721 - 6514496
Alignment:
| Q |
65 |
tatctatcgaagttgttactagattgagtcaagaccaggtcgtcctctttaatacgtttcgtgacactg----aaattgtataaggccgactatcaacca |
160 |
Q |
| |
|
|||||| | ||||||||||||| |||||||| ||||| ||| |||||||| |||||||||| ||||| ||||| | ||||| |||||||||||| |
|
|
| T |
6514721 |
tatctaccaaagttgttactaggttgagtcacgaccaagtcactctctttaagacgtttcgtggcactgcccaaaattttgcaaggcagactatcaacca |
6514622 |
T |
 |
| Q |
161 |
cgccgcctccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccttc-aatatggtactaag |
259 |
Q |
| |
|
||||||||||||||||||||||| | ||||||||||||| |||||||||||||| ||||||||| | ||||||| |||||||||| ||||||||||||| |
|
|
| T |
6514621 |
cgccgcctccaggataaaacaagcttagctacaactgtgtggttaactactgcattgtagaaaatcattcgagatttacaccttcaaatatggtactaaa |
6514522 |
T |
 |
| Q |
260 |
accactcttttaatactgaaaccact |
285 |
Q |
| |
|
||||||||||||||| |||||||||| |
|
|
| T |
6514521 |
accactcttttaatattgaaaccact |
6514496 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #23
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 65 - 296
Target Start/End: Complemental strand, 35679994 - 35679761
Alignment:
| Q |
65 |
tatctatcgaagttgttactagattgagtcaagaccaggtcgtcctctttaatacgtttcgtgacactg----aaattgtataaggccgactatcaacca |
160 |
Q |
| |
|
|||||| ||||| ||||||||| |||||||| | | |||||| |||||||| |||||||||| ||||| ||||||| ||||| |||||||||||| |
|
|
| T |
35679994 |
tatctaccgaagctgttactaggttgagtcatggc-aggtcgctctctttaagacgtttcgtggcactgtcaaaaattgtgcaaggcagactatcaacca |
35679896 |
T |
 |
| Q |
161 |
cgccgcctccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccttc-aatatggtactaag |
259 |
Q |
| |
|
||||||||||||||||||||||| ||| |||||||||||| |||||||| |||| ||||||||| ||||||||||||||||| || |||||||||||||| |
|
|
| T |
35679895 |
cgccgcctccaggataaaacaagctcaactacaactgtgcagttaacta-tgcattgtagaaaatcgttcgagaattacaccctcaaatatggtactaag |
35679797 |
T |
 |
| Q |
260 |
accactcttttaatactgaaaccactccaatatggta |
296 |
Q |
| |
|
||||||| |||||||||||||||||| ||||||||| |
|
|
| T |
35679796 |
accactc-tttaatactgaaaccactttaatatggta |
35679761 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #24
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 73 - 298
Target Start/End: Complemental strand, 12042046 - 12041815
Alignment:
| Q |
73 |
gaagttgttactagat--tgagtcaagaccaggtcgtcctctttaatacgtttcgtgacactg----aaattgtataaggccgactatcaaccacgccgc |
166 |
Q |
| |
|
|||||||||||||| | ||||||| ||||||||||| |||||||| |||||||||| ||||| ||| | | ||||| ||||||||||||||||| |
|
|
| T |
12042046 |
gaagttgttactaggtcatgagtcacgaccaggtcgttctctttaagacgtttcgtggcactgcccaaaaatatgcaaggcaaactatcaaccacgccgc |
12041947 |
T |
 |
| Q |
167 |
ctccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccttcaatatggtactaagaccactc |
266 |
Q |
| |
|
|||||||||||||||||| ||||||||||||| || |||||||||||||| || ||||| ||||||||||||||||| ||||||||||| ||| || || |
|
|
| T |
12041946 |
ctccaggataaaacaagtccagctacaactgttcgattaactactgcactataaaaaactgttcgagaattacacctccaatatggtaccaagtacattc |
12041847 |
T |
 |
| Q |
267 |
ttttaatactgaaaccactccaatatggtact |
298 |
Q |
| |
|
|||||||||||||||||| ||||||||||| |
|
|
| T |
12041846 |
ttttaatactgaaaccacattaatatggtact |
12041815 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #25
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 65 - 296
Target Start/End: Original strand, 36423612 - 36423847
Alignment:
| Q |
65 |
tatctatcgaagttgttactagattgagtcaagaccaggtcgtcctctttaatacgtttcgtgacactg----aaattgtataaggccgactatcaacca |
160 |
Q |
| |
|
|||||| ||||||||||||||| ||||||| |||||||||| |||||||| |||||||| | ||||| ||||||| ||||| |||||||||||| |
|
|
| T |
36423612 |
tatctaccgaagttgttactaggttgagtcgcgaccaggtcgctctctttaagacgtttcgcggcactgcccaaaattgtgcaaggcagactatcaacca |
36423711 |
T |
 |
| Q |
161 |
cgccgcctccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccttc-aatatggtactaag |
259 |
Q |
| |
|
|||||||||||| |||||||||| ||||||| ||||| | ||||||| |||||||||||||| |||||||||||||||||| | |||||||| ||||| |
|
|
| T |
36423712 |
cgccgcctccagaataaaacaagcccagctactactgtttgattaactaatgcactgtagaaaatcgttcgagaattacacctccaaatatggtgctaag |
36423811 |
T |
 |
| Q |
260 |
accactcttttaatactgaaaccactccaatatggta |
296 |
Q |
| |
|
||||||| |||||||||||||||||| ||||||||| |
|
|
| T |
36423812 |
accactc-tttaatactgaaaccactttaatatggta |
36423847 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #26
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 65 - 296
Target Start/End: Original strand, 40147870 - 40148105
Alignment:
| Q |
65 |
tatctatcgaagttgttactagattgagtcaagaccaggtcgtcctctttaatacgtttcgtgacactg----aaattgtataaggccgactatcaacca |
160 |
Q |
| |
|
|||||||||||||||||| ||| |||||||| || ||||||| |||||||| | |||||||| ||||| ||||||| ||| | |||||||||||| |
|
|
| T |
40147870 |
tatctatcgaagttgttattaggttgagtcatgatcaggtcgctctctttaagatgtttcgtggcactgcccaaaattgtgcaagacagactatcaacca |
40147969 |
T |
 |
| Q |
161 |
cgccgcctccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccttc-aatatggtactaag |
259 |
Q |
| |
|
||||||||||||||||||| ||| |||||| ||| ||| | ||||||||| ||||||||||||||||||||||||||||||| | |||||||||||| | |
|
|
| T |
40147970 |
cgccgcctccaggataaaataagctcagcttcaattgttcaattaactactacactgtagaaaaccgttcgagaattacacctccaaatatggtactacg |
40148069 |
T |
 |
| Q |
260 |
accactcttttaatactgaaaccactccaatatggta |
296 |
Q |
| |
|
||||||| |||||||||||||||||| ||||||||| |
|
|
| T |
40148070 |
accactc-tttaatactgaaaccactttaatatggta |
40148105 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #27
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 65 - 285
Target Start/End: Complemental strand, 10759939 - 10759717
Alignment:
| Q |
65 |
tatctatcgaagttgttactagattgagtcaagaccaggtcgtcctctttaatacgtttcgtgacactg----aaattgtataaggccgactatcaacca |
160 |
Q |
| |
|
|||||| ||||||||||||||| |||||||| |||||||||| || ||||| |||||| ||| ||||| ||||||| ||||| |||||||||||| |
|
|
| T |
10759939 |
tatctaccgaagttgttactaggttgagtcacgaccaggtcgctct-tttaagacgttttgtggcactgcccaaaattgtgcaaggcagactatcaacca |
10759841 |
T |
 |
| Q |
161 |
cgccgcctccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccttc-aatatggtactaag |
259 |
Q |
| |
|
||||||||||||||||||||||| || |||||||||||||||||||| ||||| |||||||||||||||||||||| ||| || |||||||||||||| |
|
|
| T |
10759840 |
cgccgcctccaggataaaacaagcccatttacaactgtgcggttaacta-tgcacggtagaaaaccgttcgagaattataccctcaaatatggtactaag |
10759742 |
T |
 |
| Q |
260 |
accactcttttaatactgaaaccact |
285 |
Q |
| |
|
||||||| | | |||||||||||||| |
|
|
| T |
10759741 |
accactc-tgtcatactgaaaccact |
10759717 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #28
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 152 - 298
Target Start/End: Original strand, 4871988 - 4872134
Alignment:
| Q |
152 |
tatcaaccacgccgcctccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccttcaatatg |
251 |
Q |
| |
|
|||||||||||||||||||| ||||||||||| ||| |||||||||| || |||||||||| |||||||||||||||| |||||||| |||||||||||| |
|
|
| T |
4871988 |
tatcaaccacgccgcctccatgataaaacaagctcaactacaactgttcgattaactactgtactgtagaaaaccgtttgagaattataccttcaatatg |
4872087 |
T |
 |
| Q |
252 |
gtactaagaccactcttttaatactgaaaccactccaatatggtact |
298 |
Q |
| |
|
|||| ||||||| |||||||||| |||||||||| ||||||||||| |
|
|
| T |
4872088 |
gtacaaagaccattcttttaataatgaaaccactttaatatggtact |
4872134 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #29
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 153 - 296
Target Start/End: Complemental strand, 11981308 - 11981165
Alignment:
| Q |
153 |
atcaaccacgccgcctccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccttcaatatgg |
252 |
Q |
| |
|
|||||||||||||||||||| |||||||||| || |||||||||| || ||||||| ||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
11981308 |
atcaaccacgccgcctccagaataaaacaagcacatctacaactgttcgattaactattgcactgtagaaaaccgttcgagaattacacctctaatatgg |
11981209 |
T |
 |
| Q |
253 |
tactaagaccactcttttaatactgaaaccactccaatatggta |
296 |
Q |
| |
|
||| ||||||| ||||||||||| ||||||||| ||||||||| |
|
|
| T |
11981208 |
taccaagaccattcttttaataccgaaaccactttaatatggta |
11981165 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #30
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 24 - 282
Target Start/End: Complemental strand, 16116410 - 16116151
Alignment:
| Q |
24 |
ttgttgtattttggtttttcaaattctatttta-aaagagaatatctatcgaagttgttactagattgagtcaagaccaggtcgtcctctttaatacgtt |
122 |
Q |
| |
|
||||||||||| || |||||||||||| |||| ||||| ||||| ||||||||||||| |||| || ||||| ||| |||| | ||| |||| ||||| |
|
|
| T |
16116410 |
ttgttgtattt-ggattttcaaattcttttttttaaagacaatatttatcgaagttgttgctaggttaagtcacgactaggttgctctccttaaaacgtt |
16116312 |
T |
 |
| Q |
123 |
tcgtgacactg----aaattgtataaggccgactatcaaccacgccgcctccaggataaaacaagttcagctacaactgtgcggttaactactgcactgt |
218 |
Q |
| |
|
||||||||||| ||||||| ||| | ||||||||||||||| ||||| ||||||||||||||| ||||||| || | ||||||||||||||| | |
|
|
| T |
16116311 |
tcgtgacactgcccaaaattgtgcaagacaaactatcaaccacgccacctcctagataaaacaagttcaactacaacagtactgttaactactgcactat |
16116212 |
T |
 |
| Q |
219 |
agaaaaccgttcgagaattacaccttcaatatggtactaagaccactcttttaatactgaaacc |
282 |
Q |
| |
|
||||||||||||||||||||||| | ||||||| ||||| | ||||| ||||||||||||||| |
|
|
| T |
16116211 |
agaaaaccgttcgagaattacacatccaatatgatacta--atcactc-tttaatactgaaacc |
16116151 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #31
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 33 - 280
Target Start/End: Original strand, 9911096 - 9911344
Alignment:
| Q |
33 |
tttggtttttcaaattctattttaaaagagaatatctatcgaagttgttactagattgagtcaagaccaggtcgtcctctttaatacgtttcgtgacact |
132 |
Q |
| |
|
||||| || ||||||||| |||| | |||||||||||| ||||||||||||||| |||||| | ||| | ||||| || ||||| || ||| ||| |||| |
|
|
| T |
9911096 |
tttggattctcaaattctcttttgatagagaatatctaccgaagttgttactaggttgagttaggacaatgtcgttctttttaagacattttgtggcact |
9911195 |
T |
 |
| Q |
133 |
g----aaattgtataaggccgactatcaaccacgccgcctccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgt |
228 |
Q |
| |
|
| ||||||| ||| ||||| ||| |||||||| || | ||||||||||||||| |||||| ||||||||||| ||||||||||||||||||||| |
|
|
| T |
9911196 |
gttcaaaattgtgcggggcagactaccaatcacgccgc-tctaagataaaacaagttcaactacaattgtgcggttaattactgcactgtagaaaaccgt |
9911294 |
T |
 |
| Q |
229 |
tcgagaattacaccttcaatatggtactaagaccactcttttaatactgaaa |
280 |
Q |
| |
|
|| || |||| || ||||||||||||||||||||||||||||||||||| |
|
|
| T |
9911295 |
tc--aaaagacacattaaatatggtactaagaccactcttttaatactgaaa |
9911344 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #32
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 77 - 285
Target Start/End: Complemental strand, 20181171 - 20180959
Alignment:
| Q |
77 |
ttgttactagattgagtcaagaccaggtcgtcctctttaatacgtttcgtgacactg----aaattgtataaggccgactatcaaccacgccgcctccag |
172 |
Q |
| |
|
|||||| ||| |||||||| ||||||||| |||||||| |||||||||| || || ||||| | ||| | |||||| ||||||||| |||||| |
|
|
| T |
20181171 |
ttgttattaggttgagtcacgaccaggtcactctctttaagacgtttcgtggcattgtccaaaattatgcaagacagactattaaccacgccacctccat |
20181072 |
T |
 |
| Q |
173 |
gataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccttc-aatatggtactaagaccactctttta |
271 |
Q |
| |
|
||||||||||| ||| |||||| |||||||||||||||||||||||||||||| |||||||| ||||||| || |||||| ||| |||||||||| |||| |
|
|
| T |
20181071 |
gataaaacaagctcaactacaattgtgcggttaactactgcactgtagaaaactgttcgagatttacaccctcaaatatgataccaagaccactc-ttta |
20180973 |
T |
 |
| Q |
272 |
atactgaaaccact |
285 |
Q |
| |
|
||| |||||||||| |
|
|
| T |
20180972 |
atattgaaaccact |
20180959 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #33
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 32 - 297
Target Start/End: Complemental strand, 15415034 - 15414766
Alignment:
| Q |
32 |
ttttggtttttcaaattctattttaaaagagaatatctatcgaagttgttactagattgagtcaagaccaggtcgtcctctttaatacgtttcgtgacac |
131 |
Q |
| |
|
|||||| ||| |||||| || ||| ||| ||||||| || |||||||||||| | |||||||| ||| || || |||||||| ||||| ||| ||| |
|
|
| T |
15415034 |
ttttggatttccaaattttactttgaaatagaatatatacggaagttgttacttggttgagtcacgactagaacgctctctttaagtcgttttgtggcac |
15414935 |
T |
 |
| Q |
132 |
tg----aaattgtataaggccgactatcaaccacgccgcctccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccg |
227 |
Q |
| |
|
|| ||||||| | |||| || |||||||||||||||||||||||||| ||||| || | || ||||||||||||||||||||| ||||||||| |
|
|
| T |
15414934 |
tgcccaaaattgtgtgaggcagaatatcaaccacgccgcctccaggataatgcaagtccacatgtaaatgtgcggttaactactgcactatagaaaacct |
15414835 |
T |
 |
| Q |
228 |
ttcgagaattacaccttcaatatggtactaagaccactcttttaatactgaaaccactccaatatggtac |
297 |
Q |
| |
|
||||| | |||||||| ||||||| ||||||||||| || ||||||||| || ||||| |||||||||| |
|
|
| T |
15414834 |
ttcgaaatttacacctccaatatgctactaagaccaatc-tttaatactagaatcactctaatatggtac |
15414766 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #34
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 66 - 285
Target Start/End: Complemental strand, 12102950 - 12102726
Alignment:
| Q |
66 |
atctatcgaagttgttactagattgagtcaagaccaggtcgtcctctttaatacgtttcgtgacactg----aaattgtataaggccgactatcaaccac |
161 |
Q |
| |
|
||||| ||||||||||||||| |||||||| ||| |||||| |||||||| || ||| ||| ||||| ||||||| |||| ||||||||||||| |
|
|
| T |
12102950 |
atctaccgaagttgttactaggttgagtcacgactaggtcgctctctttaagactttttgtggcactggccaaaattgtgcaaggaagactatcaaccac |
12102851 |
T |
 |
| Q |
162 |
gccgcctccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccttc-aatatg----gtact |
256 |
Q |
| |
|
||| | ||||||||||||||| || ||||||||||||||||||||||| | ||||||||||||| | || || |||| || |||||| ||||| |
|
|
| T |
12102850 |
accgtcaccaggataaaacaagaccaactacaactgtgcggttaactactac---gtagaaaaccgtttgggattttcaccctcaaatatggtatgtact |
12102754 |
T |
 |
| Q |
257 |
aagaccactcttttaatactgaaaccact |
285 |
Q |
| |
|
|||||||||| |||||||||||||||||| |
|
|
| T |
12102753 |
aagaccactc-tttaatactgaaaccact |
12102726 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #35
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 190 - 283
Target Start/End: Complemental strand, 9726678 - 9726586
Alignment:
| Q |
190 |
tacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccttcaatatggtactaagaccactcttttaatactgaaacca |
283 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| || |||||| || ||||||||| |||||||| || |||||||||||||||| |
|
|
| T |
9726678 |
tacaactgtgcggttaactactgcactgtagaaaaccgttcaaggtttacactttaaatatggtattaagaccattc-tttaatactgaaacca |
9726586 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #36
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 65 - 183
Target Start/End: Complemental strand, 37652950 - 37652828
Alignment:
| Q |
65 |
tatctatcgaagttgttactagattgagtcaagaccaggtcgtcctctttaatacgtttcgtgacactg----aaattgtataaggccgactatcaacca |
160 |
Q |
| |
|
|||||| ||||||||||| ||| |||||||| || ||||||| |||||||| ||||||||||||| || ||||||| ||||| |||||||||||| |
|
|
| T |
37652950 |
tatctaccgaagttgttattaggttgagtcacgatcaggtcgctctctttaagacgtttcgtgacattgtccaaaattgtgcaaggcagactatcaacca |
37652851 |
T |
 |
| Q |
161 |
cgccgcctccaggataaaacaag |
183 |
Q |
| |
|
|||| |||||||||||||||||| |
|
|
| T |
37652850 |
cgccacctccaggataaaacaag |
37652828 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #37
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 205 - 280
Target Start/End: Complemental strand, 34707513 - 34707439
Alignment:
| Q |
205 |
aactactgcactgtagaaaaccgttcgagaattacaccttcaatatggtactaagaccactcttttaatactgaaa |
280 |
Q |
| |
|
||||| ||||| ||||||||||||||||| ||||||||| ||||||||||||||||||||| ||||||||||||| |
|
|
| T |
34707513 |
aactattgcaccatagaaaaccgttcgagatttacaccttaaatatggtactaagaccactc-tttaatactgaaa |
34707439 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 134 - 183
Target Start/End: Complemental strand, 37550079 - 37550030
Alignment:
| Q |
134 |
aaattgtataaggccgactatcaaccacgccgcctccaggataaaacaag |
183 |
Q |
| |
|
||||||| ||||| |||||||||||||||| |||||||||||||||||| |
|
|
| T |
37550079 |
aaattgtgcaaggcagactatcaaccacgccacctccaggataaaacaag |
37550030 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 246 - 283
Target Start/End: Complemental strand, 13301417 - 13301381
Alignment:
| Q |
246 |
aatatggtactaagaccactcttttaatactgaaacca |
283 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
13301417 |
aatatggtactaagaccactc-tttaatactgaaacca |
13301381 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 89 - 181
Target Start/End: Complemental strand, 24435964 - 24435869
Alignment:
| Q |
89 |
tgagtcaagaccaggtcgtcctctttaatacgtttcgtgacactg---aaattgtataaggccgactatcaaccacgccgcctccaggataaaaca |
181 |
Q |
| |
|
||||||| |||||||||| |||||||| |||||||| | |||| || |||| |||| ||||||||||||||||| ||||||||||||||| |
|
|
| T |
24435964 |
tgagtcacgaccaggtcgctctctttaagacgtttcgcggcactatccaagttgtgcaaggtagactatcaaccacgccgtctccaggataaaaca |
24435869 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 145; Significance: 3e-76; HSPs: 32)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 65 - 322
Target Start/End: Original strand, 30658238 - 30658494
Alignment:
| Q |
65 |
tatctatcgaagttgttactagattgagtcaagaccaggtcgtcctctttaatacgtttcgtgacactg----aaattgtataaggccgactatcaacca |
160 |
Q |
| |
|
|||||| |||||||||||||| |||||||| |||||||||| |||||||| |||||||||| |||| ||||||| ||||| |||||||||||| |
|
|
| T |
30658238 |
tatctaccgaagttgttactatgttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactactcaaaattgtgcaaggcagactatcaacca |
30658337 |
T |
 |
| Q |
161 |
cgccgcctccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccttcaatatggtactaaga |
260 |
Q |
| |
|
||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30658338 |
cgccgcctccaggataaaacaagcccagctgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccttcaatatggtactaaga |
30658437 |
T |
 |
| Q |
261 |
ccactcttttaatactgaaaccactccaatatggtactaagaccactcaaataagatgttac |
322 |
Q |
| |
|
| ||| |||||||||||||| |||||||||||||| ||||||||||||| | |||||| |
|
|
| T |
30658438 |
caacttttttaatactgaaa-----ccaatatggtactatgaccactcaaatatggtgttac |
30658494 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 65 - 280
Target Start/End: Complemental strand, 10160844 - 10160626
Alignment:
| Q |
65 |
tatctatcgaagttgttactagattgagtcaagaccaggtcgtcctctttaatacgtttcgtgacactg----aaattgtataaggccgactatcaacca |
160 |
Q |
| |
|
|||||| ||||||||||||||| |||||||| |||||||||| |||||||| |||||||||| ||||| ||||||| ||||| |||||||||||| |
|
|
| T |
10160844 |
tatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattgtgcaaggcagactatcaacca |
10160745 |
T |
 |
| Q |
161 |
cgccgcctccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccttcaatatggtactaaga |
260 |
Q |
| |
|
||||||||||||||||||||||| |||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10160744 |
cgccgcctccaggataaaacaagctcagctgcaactgtgcggttaacta-tgcactgtagaaaaccgttcgagaattacaccttcaatatggtactaaga |
10160646 |
T |
 |
| Q |
261 |
ccactcttttaatactgaaa |
280 |
Q |
| |
|
||| |||||||||||||||| |
|
|
| T |
10160645 |
ccattcttttaatactgaaa |
10160626 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 65 - 296
Target Start/End: Complemental strand, 1935113 - 1934878
Alignment:
| Q |
65 |
tatctatcgaagttgttactagattgagtcaagaccaggtcgtcctctttaatacgtttcgtgacactg----aaattgtataaggccgactatcaacca |
160 |
Q |
| |
|
|||||| ||||||||||||||| |||||||| |||||||||| |||||||| |||||||||| ||||| ||||||| ||| | |||||||||||| |
|
|
| T |
1935113 |
tatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattgtgcaagacagactatcaacca |
1935014 |
T |
 |
| Q |
161 |
cgccgcctccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccttc-aatatggtactaag |
259 |
Q |
| |
|
||||||||||||||||||||||| ||||| |||||||||||||||||| |||||||||||||||||||||||||||||||| || |||||||||||||| |
|
|
| T |
1935013 |
cgccgcctccaggataaaacaagcccagctgcaactgtgcggttaactaatgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaag |
1934914 |
T |
 |
| Q |
260 |
accactcttttaatactgaaaccactccaatatggta |
296 |
Q |
| |
|
||||||| |||||||||||||||||| ||||||||| |
|
|
| T |
1934913 |
accactc-tttaatactgaaaccactttaatatggta |
1934878 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 65 - 284
Target Start/End: Complemental strand, 9180844 - 9180621
Alignment:
| Q |
65 |
tatctatcgaagttgttactagattgagtcaagaccaggtcgtcctctttaatacgtttcgtgacactg----aaattgtataaggccgactatcaacca |
160 |
Q |
| |
|
|||||| ||||||||||||||| |||||||| |||||||||| |||||||| |||||||||| ||||| ||||||| ||||| |||||||||||| |
|
|
| T |
9180844 |
tatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgtccaaaattgtgcaaggcagactatcaacca |
9180745 |
T |
 |
| Q |
161 |
cgccgcctccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccttc-aatatggtactaag |
259 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||| | |||||||||||||||||||||| ||||||||||||||||| || |||||||||||||| |
|
|
| T |
9180744 |
cgccgcctccaggataaaacaagcccagctacaactgtttgattaactactgcactgtagaaaatcgttcgagaattacaccctcaaatatggtactaag |
9180645 |
T |
 |
| Q |
260 |
accactcttttaatactgaaaccac |
284 |
Q |
| |
|
||||||| ||||||||||||||||| |
|
|
| T |
9180644 |
accactc-tttaatactgaaaccac |
9180621 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 65 - 296
Target Start/End: Complemental strand, 19892586 - 19892351
Alignment:
| Q |
65 |
tatctatcgaagttgttactagattgagtcaagaccaggtcgtcctctttaatacgtttcgtgacactg----aaattgtataaggccgactatcaacca |
160 |
Q |
| |
|
|||||| ||||||||||||||| |||||||| |||||||||| |||||||| ||||||| || ||||| ||||||| || | |||||||||||| |
|
|
| T |
19892586 |
tatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcctggcactgtccaaaattgtgcaacacagactatcaacca |
19892487 |
T |
 |
| Q |
161 |
cgccgcctccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccttc-aatatggtactaag |
259 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||||| || |||||||||||||||||||||| |||||||||||||||||| | |||||||||||||| |
|
|
| T |
19892486 |
cgccgcctccaggataaaacaagctcagctacaactgttcgattaactactgcactgtagaaaatcgttcgagaattacacctccaaatatggtactaag |
19892387 |
T |
 |
| Q |
260 |
accactcttttaatactgaaaccactccaatatggta |
296 |
Q |
| |
|
||||||| |||||||||||||||||| ||||||||| |
|
|
| T |
19892386 |
accactc-tttaatactgaaaccactttaatatggta |
19892351 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 65 - 284
Target Start/End: Complemental strand, 9189923 - 9189700
Alignment:
| Q |
65 |
tatctatcgaagttgttactagattgagtcaagaccaggtcgtcctctttaatacgtttcgtgacactg----aaattgtataaggccgactatcaacca |
160 |
Q |
| |
|
|||||| ||||||||||||||| |||||||| |||||||| | |||||||| |||||||||| ||||| ||||||| ||||| |||||||||||| |
|
|
| T |
9189923 |
tatctaccgaagttgttactaggttgagtcacgaccaggttgctctctttaagacgtttcgtggcactgtccaaaattgtgcaaggcagactatcaacca |
9189824 |
T |
 |
| Q |
161 |
cgccgcctccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccttc-aatatggtactaag |
259 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||| | |||||||||||||||||||||| ||||||||||||||||| || |||||||||||||| |
|
|
| T |
9189823 |
cgccgcctccaggataaaacaagcccagctacaactgtttgattaactactgcactgtagaaaatcgttcgagaattacaccctcaaatatggtactaag |
9189724 |
T |
 |
| Q |
260 |
accactcttttaatactgaaaccac |
284 |
Q |
| |
|
||||||| ||||||||||||||||| |
|
|
| T |
9189723 |
accactc-tttaatactgaaaccac |
9189700 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 65 - 294
Target Start/End: Original strand, 30650904 - 30651137
Alignment:
| Q |
65 |
tatctatcgaagttgttactagattgagtcaagaccaggtcgtcctctttaatacgtttcgtgacactg----aaattgtataaggccgactatcaacca |
160 |
Q |
| |
|
|||||| ||||||||||||||| |||||||| |||||| ||| |||||||| |||||||||| ||||| ||||||| ||||| |||||||||||| |
|
|
| T |
30650904 |
tatctaccgaagttgttactaggttgagtcacgaccagatcgctctctttaagacgtttcgtggcactgcccaaaattgtgcaaggcagactatcaacca |
30651003 |
T |
 |
| Q |
161 |
cgccgcctccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccttc-aatatggtactaag |
259 |
Q |
| |
|
||||||||||| ||||||||||| ||||||||||||| || ||||||||||||| |||||||| |||||||||||||||||| | |||||||||||||| |
|
|
| T |
30651004 |
cgccgcctccaagataaaacaagcccagctacaactgttcgattaactactgcaccgtagaaaatcgttcgagaattacacctccaaatatggtactaag |
30651103 |
T |
 |
| Q |
260 |
accactcttttaatactgaaaccactccaatatgg |
294 |
Q |
| |
|
||||||| |||||||||||||||||| ||||||| |
|
|
| T |
30651104 |
accactc-tttaatactgaaaccactttaatatgg |
30651137 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 72 - 284
Target Start/End: Original strand, 18344413 - 18344629
Alignment:
| Q |
72 |
cgaagttgttactagattgagtcaagaccaggtcgtcctctttaatacgtttcgtgacactg----aaattgtataaggccgactatcaaccacgccgcc |
167 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||| |||||||| |||||||||| ||||| ||||||| ||||| |||||| |||||||||| | |
|
|
| T |
18344413 |
cgaagttgttactagattgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattgtgcaaggcagactattaaccacgccggc |
18344512 |
T |
 |
| Q |
168 |
tccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccttc-aatatggtactaagaccactc |
266 |
Q |
| |
|
|||||||||||||||| ||||||||||||| || |||||||||||||||||||||| |||||||||||||||||| | |||||||||||||||||||| |
|
|
| T |
18344513 |
tccaggataaaacaagcccagctacaactgttcgattaactactgcactgtagaaaatcgttcgagaattacacctccaaatatggtactaagaccact- |
18344611 |
T |
 |
| Q |
267 |
ttttaatactgaaaccac |
284 |
Q |
| |
|
||||||||||||||||| |
|
|
| T |
18344612 |
atttaatactgaaaccac |
18344629 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 65 - 296
Target Start/End: Complemental strand, 25478417 - 25478183
Alignment:
| Q |
65 |
tatctatcgaagttgttactagattgagtcaagaccaggtcgtcctctttaatacgtttcgtgacactg----aaattgtataaggccgactatcaacca |
160 |
Q |
| |
|
|||||| ||||||||||||||| |||||||| ||||||||| |||||||| |||||||||||||||| ||||||| ||||| |||||||||||| |
|
|
| T |
25478417 |
tatctaccgaagttgttactaggttgagtcacaaccaggtcgctctctttaagacgtttcgtgacactgcccaaaattgtgcaaggcagactatcaacca |
25478318 |
T |
 |
| Q |
161 |
cgccgcctccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccttc-aatatggtactaag |
259 |
Q |
| |
|
|||||||||||| |||||||||| |||||||||||||||| |||||| |||||||||||||||||||| ||||||||||| || ||||| |||||||| |
|
|
| T |
25478317 |
cgccgcctccagaataaaacaagcccagctacaactgtgcgaataacta-tgcactgtagaaaaccgttcaagaattacaccctcaaatatagtactaag |
25478219 |
T |
 |
| Q |
260 |
accactcttttaatactgaaaccactccaatatggta |
296 |
Q |
| |
|
||||||| |||||||||||||||||| ||||||||| |
|
|
| T |
25478218 |
accactc-tttaatactgaaaccactttaatatggta |
25478183 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 65 - 296
Target Start/End: Complemental strand, 25497445 - 25497211
Alignment:
| Q |
65 |
tatctatcgaagttgttactagattgagtcaagaccaggtcgtcctctttaatacgtttcgtgacactg----aaattgtataaggccgactatcaacca |
160 |
Q |
| |
|
|||||| |||| |||||||||| |||||||| |||||||||| |||||||| ||||||||| |||||| || |||| ||| | |||||||||||| |
|
|
| T |
25497445 |
tatctaccgaaattgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtaacactgcccaaatttgtgcaagtcagactatcaacca |
25497346 |
T |
 |
| Q |
161 |
cgccgcctccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccttc-aatatggtactaag |
259 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| || |||||| ||||||| |
|
|
| T |
25497345 |
cgccgcctccaggataaaacaagcccagctacaactgtgcggttaacta-tgcactgtagaaaaccgttcgagaattacaccctcaaatatgatactaag |
25497247 |
T |
 |
| Q |
260 |
accactcttttaatactgaaaccactccaatatggta |
296 |
Q |
| |
|
||||||| ||||||| |||||||||| ||||||||| |
|
|
| T |
25497246 |
accactc-tttaatattgaaaccactttaatatggta |
25497211 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 65 - 296
Target Start/End: Original strand, 31326714 - 31326948
Alignment:
| Q |
65 |
tatctatcgaagttgttactagattgagtcaagaccaggtcgtcctctttaatacgtttcgtgacactg----aaattgtataaggccgactatcaacca |
160 |
Q |
| |
|
|||||| ||||||||||||||| |||||||| |||||||||| |||||||| ||||||| || ||||| ||||||| ||||| |||||||||||| |
|
|
| T |
31326714 |
tatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcatgccactgcccaaaattgtgcaaggcagactatcaacca |
31326813 |
T |
 |
| Q |
161 |
cgccgcctccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccttc-aatatggtactaag |
259 |
Q |
| |
|
|||| |||||||||||||||||| || ||||||||||||| |||||||||||||| ||||||||||||||||||||||||| || |||||||||||||| |
|
|
| T |
31326814 |
cgccacctccaggataaaacaagcccaactacaactgtgcgattaactactgcact-tagaaaaccgttcgagaattacaccctcaaatatggtactaag |
31326912 |
T |
 |
| Q |
260 |
accactcttttaatactgaaaccactccaatatggta |
296 |
Q |
| |
|
|||||| |||||||||||||||||| ||||||||| |
|
|
| T |
31326913 |
accact-atttaatactgaaaccactttaatatggta |
31326948 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #12
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 72 - 284
Target Start/End: Original strand, 12796907 - 12797123
Alignment:
| Q |
72 |
cgaagttgttactagattgagtcaagaccaggtcgtcctctttaatacgtttcgtgacactg----aaattgtataaggccgactatcaaccacgccgcc |
167 |
Q |
| |
|
||||||||||| ||| |||||||| |||||| ||| |||||||| |||||| ||| ||||| ||||||| ||| | ||||||||||||||||| | |
|
|
| T |
12796907 |
cgaagttgttattaggttgagtcacgaccagatcgctctctttaagacgttttgtggcactgcccaaaattgttcaagacagactatcaaccacgccgtc |
12797006 |
T |
 |
| Q |
168 |
tccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccttc-aatatggtactaagaccactc |
266 |
Q |
| |
|
||||||||||||||||| | |||||||||||||||||||||||||||| |||||||||||||||||||||||||| || ||||||||||||||||||||| |
|
|
| T |
12797007 |
tccaggataaaacaagtccggctacaactgtgcggttaactactgcaccgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactc |
12797106 |
T |
 |
| Q |
267 |
ttttaatactgaaaccac |
284 |
Q |
| |
|
||||||||||||||||| |
|
|
| T |
12797107 |
-tttaatactgaaaccac |
12797123 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #13
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 65 - 258
Target Start/End: Original strand, 29677356 - 29677554
Alignment:
| Q |
65 |
tatctatcgaagttgttactagattgagtcaagaccaggtcgtcctctttaatacgtttcgtgacactg----aaattgtataaggccgactatcaacca |
160 |
Q |
| |
|
|||||| ||||||||||||||| |||||||| || || |||| |||||||| |||||||||| ||||| ||||||| || || |||||||||||| |
|
|
| T |
29677356 |
tatctagcgaagttgttactaggttgagtcacgatcatgtcgctctctttaagacgtttcgtggcactgcccaaaattgtgcaaagcagactatcaacca |
29677455 |
T |
 |
| Q |
161 |
cgccgcctccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccttc-aatatggtactaa |
258 |
Q |
| |
|
||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| |
|
|
| T |
29677456 |
cgccgcctccaggataaaataagtccagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaa |
29677554 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #14
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 33 - 298
Target Start/End: Complemental strand, 19578566 - 19578298
Alignment:
| Q |
33 |
tttggtttttcaaattctattttaaaagagaatatctatcgaagttgttactagattgagtcaagaccaggtcgtcctctttaatacgtttcgtgacact |
132 |
Q |
| |
|
||||| ||||||||||||| ||| |||||||||||||| ||||||||||| ||| |||||||| |||||| ||| |||||||| |||||| ||| |||| |
|
|
| T |
19578566 |
tttggattttcaaattctactttgaaagagaatatctaccgaagttgttattaggttgagtcacgaccagatcgctctctttaagacgttttgtggcact |
19578467 |
T |
 |
| Q |
133 |
g----aaattgtataaggccgactatcaaccacgccgcctccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgt |
228 |
Q |
| |
|
||||||| |||| |||||||||||| || ||||||||| |||||||||| || |||||| || ||||||||||| |||||||||||||| ||| |
|
|
| T |
19578466 |
acctaaaattgtgcaaggaagactatcaaccatgctgcctccagggtaaaacaagtccaactacaattgggcggttaactattgcactgtagaaaatcgt |
19578367 |
T |
 |
| Q |
229 |
tcgagaattacaccttcaatatggtactaagaccactcttttaatactgaaaccactccaatatggtact |
298 |
Q |
| |
|
|||||| ||||||||||||||||||| ||| | ||||| ||||||||| ||| ||||| ||||||||||| |
|
|
| T |
19578366 |
tcgagatttacaccttcaatatggtattaaaatcactc-tttaatactaaaatcactctaatatggtact |
19578298 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #15
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 65 - 298
Target Start/End: Original strand, 29677742 - 29677979
Alignment:
| Q |
65 |
tatctatcgaagttgttactagattgagtcaagaccaggtcgtcctctttaatacgtttcgtgacactg----aaattgtataaggccgactatcaacca |
160 |
Q |
| |
|
|||||| ||||||||||||||| |||||||| |||||||||| ||| |||| || ||| ||| ||||| ||||||| ||||| ||||||||||| |
|
|
| T |
29677742 |
tatctagcgaagttgttactaggttgagtcacgaccaggtcgctctcattaagacatttagtggcactgccaaaaattgtgcaaggcaaactatcaacca |
29677841 |
T |
 |
| Q |
161 |
cgccgcctccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccttc-aatatggtactaag |
259 |
Q |
| |
|
||||||| |||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||| |
|
|
| T |
29677842 |
agccgcctacaggataaaaaaagcccagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacacccacaaatatggtactaag |
29677941 |
T |
 |
| Q |
260 |
accactcttttaatactgaaaccactccaatatggtact |
298 |
Q |
| |
|
||||||| ||||||| ||| |||||| ||||||||||| |
|
|
| T |
29677942 |
accactc-tttaatattgataccactttaatatggtact |
29677979 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #16
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 65 - 296
Target Start/End: Original strand, 28603273 - 28603513
Alignment:
| Q |
65 |
tatctatcgaagttgttactagattgagtcaagaccaggtcgtcctctttaatacgtttcgtgacactg----aaattgtataaggccgactatcaacca |
160 |
Q |
| |
|
|||||| ||||||||||||||| |||||||| |||||||||| |||||||| |||||||||||||||| ||||||| ||| | |||||||||||| |
|
|
| T |
28603273 |
tatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaaaacgtttcgtgacactgtccaaaattgtgcaagacagactatcaacca |
28603372 |
T |
 |
| Q |
161 |
cgccgcct----ccaggataaaa-caagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccttc-aatatggta |
254 |
Q |
| |
|
||| ||| ||||||||||| ||||||||||||||||||| || ||||||||||||||||| |||||||||| |||||||||||| | ||||||||| |
|
|
| T |
28603373 |
cgctacctacctccaggataaaaacaagttcagctacaactgttcgattaactactgcactgtaaaaaaccgttcaagaattacacctccaaatatggta |
28603472 |
T |
 |
| Q |
255 |
ctaagaccactcttttaatactgaaaccactccaatatggta |
296 |
Q |
| |
|
||||||||||| |||||||| |||||||||| ||||||||| |
|
|
| T |
28603473 |
ctaagaccact-ttttaatattgaaaccactttaatatggta |
28603513 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #17
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 65 - 308
Target Start/End: Original strand, 35601897 - 35602139
Alignment:
| Q |
65 |
tatctatcgaagttgttactagattgagtcaagaccaggtcgtcctctttaatacgtttcgtgacactg----aaattgtataaggccgactatcaacca |
160 |
Q |
| |
|
|||||| ||||||||||||||| |||| ||| |||||||||| || ||||| |||||||||| ||||| ||||||| ||| | || ||||||||| |
|
|
| T |
35601897 |
tatctaccgaagttgttactaggttgaatcacgaccaggtcgctctttttaagacgtttcgtggcactgtccaaaattgtgcaagacagagtatcaacca |
35601996 |
T |
 |
| Q |
161 |
cgccgcctccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccttc-aatatggtactaag |
259 |
Q |
| |
|
|||||||||||||||||||||| ||||||||| ||| || ||||||||||||||||||||||||||||||||||||||| | | |||||||||||||| |
|
|
| T |
35601997 |
cgccgcctccaggataaaacaaacccagctacaattgttcgattaactactgcactgtagaaaaccgttcgagaattacacatccaaatatggtactaag |
35602096 |
T |
 |
| Q |
260 |
accactcttttaatactgaaaccactccaatatggtactaagaccactc |
308 |
Q |
| |
|
||||||| ||||||| ||||| |||||||||||||| |||||||| |
|
|
| T |
35602097 |
accactc-tttaatattgaaa-----ccaatatggtactatgaccactc |
35602139 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #18
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 72 - 285
Target Start/End: Complemental strand, 7737964 - 7737747
Alignment:
| Q |
72 |
cgaagttgttactagattgagtcaagaccaggtcgtcctctttaatacgtttcgtgacactg----aaattgtataaggccgactatcaaccacgccgcc |
167 |
Q |
| |
|
||||||||||||||| |||||||| ||||| |||| |||||||| | |||| ||| ||||| ||||||| ||| | ||||||||||||||||||| |
|
|
| T |
7737964 |
cgaagttgttactaggttgagtcacgaccatgtcgctctctttaagaagttttgtggcactgcccaaaattgtgcaagacagactatcaaccacgccgcc |
7737865 |
T |
 |
| Q |
168 |
tccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccttcaatatggtactaagaccactct |
267 |
Q |
| |
|
|||||||||||||||| || |||||| ||| || ||||||| ||||||||||||||||||||||||||||||||| ||||||| ||| || |||| ||| |
|
|
| T |
7737864 |
tccaggataaaacaagcccaactacaattgttcgattaactattgcactgtagaaaaccgttcgagaattacacctccaatatgataccaaaaccattct |
7737765 |
T |
 |
| Q |
268 |
tttaatactgaaaccact |
285 |
Q |
| |
|
||||||||||||| |||| |
|
|
| T |
7737764 |
tttaatactgaaatcact |
7737747 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #19
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 5 - 305
Target Start/End: Complemental strand, 19094678 - 19094366
Alignment:
| Q |
5 |
ttgtttttggaattctaaattgttgtattttggtttttcaaattctattttaaaagagaat----atctatcgaagttgttactagattgagtcaagacc |
100 |
Q |
| |
|
||||||||||| ||||||| ||||||||||||| |||| |||| ||||||||||| | ||| ||||| ||||||||||| ||| |||||||| || | |
|
|
| T |
19094678 |
ttgtttttggatttctaaactgttgtattttggattttaaaat-ctattttaaaaaataattttcatctaccgaagttgttattaggttgagtcacgatc |
19094580 |
T |
 |
| Q |
101 |
aggtcgtcctctttaatacgtttcgtgacactg----aaattgtataaggccgactatcaaccacgccgcctccaggataaaa-caagttcagctacaac |
195 |
Q |
| |
|
|||||| ||| |||| |||||| || |||| ||||||| ||||| | |||||||||| ||||||||||||||||| |||| ||||||||||| |
|
|
| T |
19094579 |
aggtcgctctccttaaaacgttttttggtactgcccaaaattgtgcaaggcaaaatatcaaccacaccgcctccaggataaaaacaagctcagctacaac |
19094480 |
T |
 |
| Q |
196 |
tgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccttc-aatatgg-tactaagaccactc--ttttaatactgaaaccactccaata |
291 |
Q |
| |
|
|||||| |||| ||||||||||||||||||||||||||||||||||| || ||||||| || |||| |||||| |||||||||||||||| | ||| |
|
|
| T |
19094479 |
tgtgcgattaattactgcactgtagaaaaccgttcgagaattacaccctcaaatatggctattaaggccactccaatttaatactgaaaccattattata |
19094380 |
T |
 |
| Q |
292 |
tggtactaagacca |
305 |
Q |
| |
|
|||||||| ||||| |
|
|
| T |
19094379 |
tggtactatgacca |
19094366 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #20
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 65 - 283
Target Start/End: Original strand, 30631554 - 30631780
Alignment:
| Q |
65 |
tatctatcgaagttgttactagattgagtcaagaccaggtcgtcctctttaatacgtttcgtgacactg----aaattgtataaggccgactatcaacca |
160 |
Q |
| |
|
|||||| ||||||||||||||| |||||||| || ||||| |||||||| || ||||||| || || ||||||| ||| |||||||||||| |
|
|
| T |
30631554 |
tatctaccgaagttgttactaggttgagtcacgattaggtcactctctttaaaacttttcgtggcattgccaaaaattgtgcaagaaagactatcaacca |
30631653 |
T |
 |
| Q |
161 |
cgccgcctccaggataaaacaagttcagctacaactgt---gcggttaactactgcactgtagaaaaccgttcgagaatt-acaccttcaatatggtact |
256 |
Q |
| |
|
|||| |||||||||||||||||| || || ||||||| ||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
30631654 |
cgccacctccaggataaaacaagcccaactgcaactgttgtgcggttatctactgcactgtagaaaaccgttcgagaatttacaccttcaatatggtact |
30631753 |
T |
 |
| Q |
257 |
aagaccactcttttaatactgaaacca |
283 |
Q |
| |
|
||||| |||||||||||| |||||||| |
|
|
| T |
30631754 |
aagacaactcttttaatattgaaacca |
30631780 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #21
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 45 - 269
Target Start/End: Complemental strand, 21523859 - 21523636
Alignment:
| Q |
45 |
aattctattttaaaagagaatatctatcgaagttgttactagattgagtcaagaccaggtcgtcctctttaatacgtttcgtgacactg----aaattgt |
140 |
Q |
| |
|
||||||||||| ||| |||||||||| | |||||||| ||| |||||||| |||||||| | ||||||| |||||||||| ||||| ||||||| |
|
|
| T |
21523859 |
aattctattttgaaaaagaatatctactggagttgttaataggttgagtcacgaccaggttgctatctttaa-acgtttcgtggcactgcccaaaattgt |
21523761 |
T |
 |
| Q |
141 |
ataaggccgactatcaaccacgccgcctccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattaca |
240 |
Q |
| |
|
|||| |||||||||||||||||| || ||| |||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| ||||| |
|
|
| T |
21523760 |
gcaagggagactatcaaccacgccgcttctaggttaaaacaagttcagctacaactgtgcggttaact-----actgtagaaaatcgttcgagatttaca |
21523666 |
T |
 |
| Q |
241 |
ccttc-aatatggtactaagaccactcttt |
269 |
Q |
| |
|
|| || |||||||||||||||||||||||| |
|
|
| T |
21523665 |
ccctcaaatatggtactaagaccactcttt |
21523636 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #22
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 52 - 285
Target Start/End: Complemental strand, 40847728 - 40847495
Alignment:
| Q |
52 |
ttttaaaagagaatatctatcgaagttgttactagattgagtcaagaccaggtcgtcctctttaatacgtttcgtgacactg----aaattgtataaggc |
147 |
Q |
| |
|
||||||| |||||| ||| |||||||||||||||||||||||| ||||| ||||| |||||||| |||||| ||| ||||| || |||| ||||| |
|
|
| T |
40847728 |
ttttaaataagaataactaccgaagttgttactagattgagtcacgaccatgtcgttctctttaagacgttttgtggcactgttcaaagttgtgcaaggc |
40847629 |
T |
 |
| Q |
148 |
cgactatcaaccacgccgcctccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacac-cttca |
246 |
Q |
| |
|
||||||||||||||| ||||| ||||||||||||| || ||||||||||| ||||||||||| ||||||||||||||||| |||||| || | |
|
|
| T |
40847628 |
aaactatcaaccacgccacctcctggataaaacaagtccaactacaactgtgtggttaactacta-----tagaaaaccgttcgagatttacactctcaa |
40847534 |
T |
 |
| Q |
247 |
atatgg-tactaagaccactcttttaatactgaaaccact |
285 |
Q |
| |
|
|||||| ||| |||||||||| ||||||| |||||||||| |
|
|
| T |
40847533 |
atatggttaccaagaccactc-tttaatattgaaaccact |
40847495 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #23
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 65 - 226
Target Start/End: Complemental strand, 42926881 - 42926714
Alignment:
| Q |
65 |
tatctatcgaagttgttactagattgagtcaagaccaggtcgtcctctttaatac--gtttcgtgacactg----aaattgtataaggccgactatcaac |
158 |
Q |
| |
|
|||||| ||||||||||||||| |||||||| || |||| || |||||||| || |||||||| ||||| ||||||| |||| |||||||||| |
|
|
| T |
42926881 |
tatctaccgaagttgttactaggttgagtcacgatcaggccgctctctttaagacacgtttcgtggcactgcccaaaattgtgcaaggtagactatcaac |
42926782 |
T |
 |
| Q |
159 |
cacgccgcctccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaacc |
226 |
Q |
| |
|
||||||||||||||||||| ||||| ||| ||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
42926781 |
cacgccgcctccaggataatacaagctcaactacaactgtgcggttaactactgcaccgtagaaaacc |
42926714 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #24
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 196 - 263
Target Start/End: Complemental strand, 17453564 - 17453497
Alignment:
| Q |
196 |
tgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccttcaatatggtactaagacca |
263 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
17453564 |
tgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccttcaatatggtactaagacca |
17453497 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #25
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 52 - 285
Target Start/End: Complemental strand, 17545432 - 17545194
Alignment:
| Q |
52 |
ttttaaaagagaatatctatcgaagttgttactagattgagtcaagaccaggtcgtcctct-ttaatacgtttcgtgacactg----aaattgtataagg |
146 |
Q |
| |
|
|||||||| |||||||||| ||||||||||||||| |||||| | || |||||||| | | |||| ||||||||||||||| || |||| || |
|
|
| T |
17545432 |
ttttaaaaaagaatatctaccgaagttgttactaggttgagttacgatcaggtcgttttttcttaagacgtttcgtgacacttttcaaagttgtgcaaaa |
17545333 |
T |
 |
| Q |
147 |
ccgactatcaaccacgccgcctccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccttc- |
245 |
Q |
| |
|
|||||||||||||||| |||| ||||||||||||| || ||||||| ||||||||||||| ||| ||||||||| | ||||||| ||||||| || |
|
|
| T |
17545332 |
aagactatcaaccacgccacctcgaggataaaacaagcacatctacaacagtgcggttaactaacgcattgtagaaaatcattcgagatttacaccctca |
17545233 |
T |
 |
| Q |
246 |
aatatggtactaagaccactcttttaatactgaaaccact |
285 |
Q |
| |
|
|||||| |||||||||||||| |||||||| ||||||||| |
|
|
| T |
17545232 |
aatatgatactaagaccactc-tttaatacggaaaccact |
17545194 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #26
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 65 - 221
Target Start/End: Complemental strand, 35639117 - 35638957
Alignment:
| Q |
65 |
tatctatcgaagttgttactagattgagtcaagaccaggtcgtcctctttaatacgtttcgtgacactg----aaattgtataaggccgactatcaacca |
160 |
Q |
| |
|
|||||| |||||||||||||| |||| ||| || ||||||| || ||||| |||||||||| ||||| ||||||| ||| | | ||||||||| |
|
|
| T |
35639117 |
tatctaccgaagttgttactaagttgaatcacgatcaggtcgctctttttaagacgtttcgtggcactgcccaaaattgtgcaagacagcgtatcaacca |
35639018 |
T |
 |
| Q |
161 |
cgccgcctccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtaga |
221 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||||| || ||||||||||||||||||| |
|
|
| T |
35639017 |
cgccgcctccaggataaaacaagctcagctacaactgttcgattaactactgcactgtaga |
35638957 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #27
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 150 - 266
Target Start/End: Complemental strand, 13291571 - 13291455
Alignment:
| Q |
150 |
actatcaaccacgccgcctccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccttcaata |
249 |
Q |
| |
|
|||||||||||||||||| | | |||| || |||||||||||||||| |||| ||||||| ||| | |||||||||||||||| ||||| |||| ||||| |
|
|
| T |
13291571 |
actatcaaccacgccgccactatgatagaataagttcagctacaactatgcgattaactattgctcagtagaaaaccgttcgataattaaacctccaata |
13291472 |
T |
 |
| Q |
250 |
tggtactaagaccactc |
266 |
Q |
| |
|
| ||||||| ||||||| |
|
|
| T |
13291471 |
tcgtactaaaaccactc |
13291455 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #28
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 5 - 101
Target Start/End: Original strand, 20711360 - 20711456
Alignment:
| Q |
5 |
ttgtttttggaattctaaattgttgtattttggtttttcaaattctattttaaaagagaatatctatcgaagttgttactagattgagtcaagacca |
101 |
Q |
| |
|
||||||||||| || ||| ||||||||||||||||| ||||||||||||| |||| |||||||| ||||||||||||||| |||||||| ||||| |
|
|
| T |
20711360 |
ttgtttttggatttacaaactgttgtattttggttttccaaattctattttttaagaaaatatctaccgaagttgttactaggttgagtcacgacca |
20711456 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 43 - 95
Target Start/End: Complemental strand, 20573012 - 20572960
Alignment:
| Q |
43 |
caaattctattttaaaagagaatatctatcgaagttgttactagattgagtca |
95 |
Q |
| |
|
|||||||||||||||||| |||||||||||||| ||||||||||||||||||| |
|
|
| T |
20573012 |
caaattctattttaaaagggaatatctatcgaaattgttactagattgagtca |
20572960 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #30
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 149 - 242
Target Start/End: Original strand, 32079442 - 32079535
Alignment:
| Q |
149 |
gactatcaaccacgccgcctccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacacc |
242 |
Q |
| |
|
||||||||| |||| | ||||||||||||| | ||||||||||||||||||| ||||||| |||| | ||| || ||||||||||||||||| |
|
|
| T |
32079442 |
gactatcaatcacgttgtctccaggataaaaaaggttcagctacaactgtgcgattaactattgcattatagctaatcgttcgagaattacacc |
32079535 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 174 - 281
Target Start/End: Original strand, 30618951 - 30619061
Alignment:
| Q |
174 |
ataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccttcaatatggtactaagaccactc---tttt |
270 |
Q |
| |
|
|||||||||| | | ||| |||| |||| ||| ||||||| ||||||||| | |||||||||||||||| ||||| ||| |||||||||| |||| |
|
|
| T |
30618951 |
ataaaacaagcttacctataactatgcgattagttactgcattgtagaaaatcattcgagaattacacctccaatacagtatcaagaccactcatatttt |
30619050 |
T |
 |
| Q |
271 |
aatactgaaac |
281 |
Q |
| |
|
||||||||||| |
|
|
| T |
30619051 |
aatactgaaac |
30619061 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 228 - 283
Target Start/End: Original strand, 30629011 - 30629069
Alignment:
| Q |
228 |
ttcgagaattacaccttcaatatggtactaagaccac---tcttttaatactgaaacca |
283 |
Q |
| |
|
||||||||||||||||||||||| ||| |||||||| | ||||||||||||||||| |
|
|
| T |
30629011 |
ttcgagaattacaccttcaatatagtatcaagaccacttatattttaatactgaaacca |
30629069 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 142; Significance: 2e-74; HSPs: 44)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 65 - 283
Target Start/End: Original strand, 3672559 - 3672781
Alignment:
| Q |
65 |
tatctatcgaagttgttactagattgagtcaagaccaggtcgtcctctttaatacgtttcgtgacactg----aaattgtataaggccgactatcaacca |
160 |
Q |
| |
|
|||||| ||||||||||||||| |||||||| |||||||||| |||||||| ||||||| || ||||| ||||||| ||||| |||||||||||| |
|
|
| T |
3672559 |
tatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcatggcactgcccaaaattgtgcaaggcagactatcaacca |
3672658 |
T |
 |
| Q |
161 |
cgccgcctccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccttcaatatggtactaaga |
260 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3672659 |
cgccgcctccaggataaaacaagcccagctacaactgttcgattaactactgcactgtagaaaaccgttcgagaattacaccttcaatatggtactaaga |
3672758 |
T |
 |
| Q |
261 |
ccactcttttaatactgaaacca |
283 |
Q |
| |
|
||| ||||||||||||||||||| |
|
|
| T |
3672759 |
ccaatcttttaatactgaaacca |
3672781 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 65 - 283
Target Start/End: Original strand, 3692591 - 3692813
Alignment:
| Q |
65 |
tatctatcgaagttgttactagattgagtcaagaccaggtcgtcctctttaatacgtttcgtgacactg----aaattgtataaggccgactatcaacca |
160 |
Q |
| |
|
|||||| ||||||||||||||| |||||||| |||||||||| |||||||| ||||||| || ||||| ||||||| ||||| |||||||||||| |
|
|
| T |
3692591 |
tatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcatggcactgcccaaaattgtgcaaggcagactatcaacca |
3692690 |
T |
 |
| Q |
161 |
cgccgcctccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccttcaatatggtactaaga |
260 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3692691 |
cgccgcctccaggataaaacaagcccagctacaactgttcgattaactactgcactgtagaaaaccgttcgagaattacaccttcaatatggtactaaga |
3692790 |
T |
 |
| Q |
261 |
ccactcttttaatactgaaacca |
283 |
Q |
| |
|
||| ||||||||||||||||||| |
|
|
| T |
3692791 |
ccaatcttttaatactgaaacca |
3692813 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 65 - 283
Target Start/End: Original strand, 8069653 - 8069874
Alignment:
| Q |
65 |
tatctatcgaagttgttactagattgagtcaagaccaggtcgtcctctttaatacgtttcgtgacactg---aaattgtataaggccgactatcaaccac |
161 |
Q |
| |
|
|||||| ||||||||||||||| |||||||| |||||||||| |||||||| |||||||||| ||||| ||||||| ||| | ||||||||||||| |
|
|
| T |
8069653 |
tatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgtccaaattgtgcaagacagactatcaaccac |
8069752 |
T |
 |
| Q |
162 |
gccgcctccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccttcaatatggtactaagac |
261 |
Q |
| |
|
|||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8069753 |
gccgcctccaggataaaacaagcccagctgcaactgtgcggttaactactgcactgtagataaccgttcgagaattacaccttcaatatggtactaagac |
8069852 |
T |
 |
| Q |
262 |
cactcttttaatactgaaacca |
283 |
Q |
| |
|
|| |||||||| |||||||||| |
|
|
| T |
8069853 |
caatcttttaacactgaaacca |
8069874 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 65 - 296
Target Start/End: Complemental strand, 7571338 - 7571103
Alignment:
| Q |
65 |
tatctatcgaagttgttactagattgagtcaagaccaggtcgtcctctttaatacgtttcgtgacactg----aaattgtataaggccgactatcaacca |
160 |
Q |
| |
|
|||||| ||||||||||||||| |||||||| |||||||||| |||||||| |||||||||| ||||| ||||||| ||| | ||||||||| || |
|
|
| T |
7571338 |
tatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattgtgcaagacagactatcaatca |
7571239 |
T |
 |
| Q |
161 |
cgccgcctccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccttc-aatatggtactaag |
259 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||| |
|
|
| T |
7571238 |
cgccgcctccaggataaaacaagctcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacacctccaaatatggtactaag |
7571139 |
T |
 |
| Q |
260 |
accactcttttaatactgaaaccactccaatatggta |
296 |
Q |
| |
|
||||| | |||||||||||||||||| ||||||||| |
|
|
| T |
7571138 |
accacgc-tttaatactgaaaccactttaatatggta |
7571103 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 65 - 296
Target Start/End: Complemental strand, 23666243 - 23666008
Alignment:
| Q |
65 |
tatctatcgaagttgttactagattgagtcaagaccaggtcgtcctctttaatacgtttcgtgacactg----aaattgtataaggccgactatcaacca |
160 |
Q |
| |
|
|||||| ||||||||||||||| |||||||| |||||||||| |||||||| |||||||||| ||||| ||||||| ||||| |||||||||||| |
|
|
| T |
23666243 |
tatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattgtgcaaggcagactatcaacca |
23666144 |
T |
 |
| Q |
161 |
cgccgcctccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccttc-aatatggtactaag |
259 |
Q |
| |
|
||||||||||||||||||||||| ||||| |||||||||||||||||| |||||||||||||||||||||||||||||||| || |||||||||||||| |
|
|
| T |
23666143 |
cgccgcctccaggataaaacaagcccagctgcaactgtgcggttaactaatgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaag |
23666044 |
T |
 |
| Q |
260 |
accactcttttaatactgaaaccactccaatatggta |
296 |
Q |
| |
|
||||||| |||||||||||||||||| ||||||||| |
|
|
| T |
23666043 |
accactc-tttaatactgaaaccactttaatatggta |
23666008 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 65 - 296
Target Start/End: Complemental strand, 24038491 - 24038256
Alignment:
| Q |
65 |
tatctatcgaagttgttactagattgagtcaagaccaggtcgtcctctttaatacgtttcgtgacactg----aaattgtataaggccgactatcaacca |
160 |
Q |
| |
|
|||||| ||||||||||||||| |||||||| |||||||||| |||||||| |||||||||| ||||| ||||||| ||||| |||||||||||| |
|
|
| T |
24038491 |
tatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattgtgcaaggcagactatcaacca |
24038392 |
T |
 |
| Q |
161 |
cgccgcctccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccttc-aatatggtactaag |
259 |
Q |
| |
|
||||||||||||||||||||||| ||||| |||||||||||||||||| |||||||||||||||||||||||||||||||| || |||||||||||||| |
|
|
| T |
24038391 |
cgccgcctccaggataaaacaagcccagctgcaactgtgcggttaactaatgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaag |
24038292 |
T |
 |
| Q |
260 |
accactcttttaatactgaaaccactccaatatggta |
296 |
Q |
| |
|
||||||| |||||||||||||||||| ||||||||| |
|
|
| T |
24038291 |
accactc-tttaatactgaaaccactttaatatggta |
24038256 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 65 - 283
Target Start/End: Original strand, 3033617 - 3033839
Alignment:
| Q |
65 |
tatctatcgaagttgttactagattgagtcaagaccaggtcgtcctctttaatacgtttcgtgacactg----aaattgtataaggccgactatcaacca |
160 |
Q |
| |
|
|||||| ||||||||||||||| |||||||| |||||||||| |||||||| ||||||| || ||||| ||||||| ||||| |||||||||||| |
|
|
| T |
3033617 |
tatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcatggcactgcccaaaattgtgcaaggcagactatcaacca |
3033716 |
T |
 |
| Q |
161 |
cgccgcctccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccttcaatatggtactaaga |
260 |
Q |
| |
|
| ||||||| ||||||||||||| |||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3033717 |
caccgcctcaaggataaaacaagctcagctacaactgttcgattaactactgcactgtagaaaaccgttcgagaattacaccttcaatatggtactaaga |
3033816 |
T |
 |
| Q |
261 |
ccactcttttaatactgaaacca |
283 |
Q |
| |
|
|| ||||||||||||||||||| |
|
|
| T |
3033817 |
tcaatcttttaatactgaaacca |
3033839 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 65 - 296
Target Start/End: Complemental strand, 758488 - 758253
Alignment:
| Q |
65 |
tatctatcgaagttgttactagattgagtcaagaccaggtcgtcctctttaatacgtttcgtgacactg----aaattgtataaggccgactatcaacca |
160 |
Q |
| |
|
|||||| ||||||||||||||| |||||||| |||||| ||| |||||||| |||||||||| |||| ||||||| ||||| |||||||||||| |
|
|
| T |
758488 |
tatctaccgaagttgttactaggttgagtcacgaccagatcgctctctttaagacgtttcgtggcactacccaaaattgtgcaaggcagactatcaacca |
758389 |
T |
 |
| Q |
161 |
cgccgcctccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccttc-aatatggtactaag |
259 |
Q |
| |
|
||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||| |
|
|
| T |
758388 |
cgccgcctccaggataaaacaagcccagctgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaag |
758289 |
T |
 |
| Q |
260 |
accactcttttaatactgaaaccactccaatatggta |
296 |
Q |
| |
|
||||||| |||||||||||||||||| ||||||||| |
|
|
| T |
758288 |
accactc-tttaatactgaaaccactttaatatggta |
758253 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 65 - 283
Target Start/End: Original strand, 8883143 - 8883365
Alignment:
| Q |
65 |
tatctatcgaagttgttactagattgagtcaagaccaggtcgtcctctttaatacgtttcgtgacactg----aaattgtataaggccgactatcaacca |
160 |
Q |
| |
|
|||||| ||||||||||||||| | |||||| |||||||||| |||||||| |||||||||| ||||| ||||||| ||| | |||||||||||| |
|
|
| T |
8883143 |
tatctaccgaagttgttactaggtcgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattgtgcaagacagactatcaacca |
8883242 |
T |
 |
| Q |
161 |
cgccgcctccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccttcaatatggtactaaga |
260 |
Q |
| |
|
||| ||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
8883243 |
cgctgcctccaggataaaacaagcccagctgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccttcaatatggtacaaaga |
8883342 |
T |
 |
| Q |
261 |
ccactcttttaatactgaaacca |
283 |
Q |
| |
|
||| | ||||||||||||||||| |
|
|
| T |
8883343 |
ccaatattttaatactgaaacca |
8883365 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 65 - 283
Target Start/End: Original strand, 8887903 - 8888125
Alignment:
| Q |
65 |
tatctatcgaagttgttactagattgagtcaagaccaggtcgtcctctttaatacgtttcgtgacactg----aaattgtataaggccgactatcaacca |
160 |
Q |
| |
|
|||||| ||||||||||||||| |||||||| |||||||||| |||||||| |||||| || ||||| ||||||| ||| | || ||||||||| |
|
|
| T |
8887903 |
tatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgttttgttgcactgtccaaaattgtgcaagacagattatcaacca |
8888002 |
T |
 |
| Q |
161 |
cgccgcctccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccttcaatatggtactaaga |
260 |
Q |
| |
|
|||||||||||||||||||||| | ||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8888003 |
cgccgcctccaggataaaacaaatccagctgcaactgtgcggttaactactacactgtagaaaaccgttcgagaattacaccttcaatatggtactaaga |
8888102 |
T |
 |
| Q |
261 |
ccactcttttaatactgaaacca |
283 |
Q |
| |
|
||| ||||||||||||||||||| |
|
|
| T |
8888103 |
ccaatcttttaatactgaaacca |
8888125 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 65 - 284
Target Start/End: Complemental strand, 14438815 - 14438592
Alignment:
| Q |
65 |
tatctatcgaagttgttactagattgagtcaagaccaggtcgtcctctttaatacgtttcgtgacactg----aaattgtataaggccgactatcaacca |
160 |
Q |
| |
|
|||||| ||||||||||||||| |||||||| |||||||||| ||||||||| |||||||||| |||| ||||||| ||||| ||| |||||||| |
|
|
| T |
14438815 |
tatctaccgaagttgttactaggttgagtcacgaccaggtcgccctctttaagacgtttcgtggcactacccaaaattgtgcaaggcagacaatcaacca |
14438716 |
T |
 |
| Q |
161 |
cgccgcctccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccttc-aatatggtactaag |
259 |
Q |
| |
|
||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||| |
|
|
| T |
14438715 |
cgccgcctccaggataaaacaagcccagctgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaag |
14438616 |
T |
 |
| Q |
260 |
accactcttttaatactgaaaccac |
284 |
Q |
| |
|
||||||| ||||||| ||||||||| |
|
|
| T |
14438615 |
accactc-tttaatattgaaaccac |
14438592 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 65 - 285
Target Start/End: Complemental strand, 49971544 - 49971320
Alignment:
| Q |
65 |
tatctatcgaagttgttactagattgagtcaagaccaggtcgtcctctttaatacgtttcgtgacactg----aaattgtataaggccgactatcaacca |
160 |
Q |
| |
|
|||||| ||||||||||||||| |||||||| |||||||||| |||||||| |||||||||| |||| ||||||| ||||| ||||||||| || |
|
|
| T |
49971544 |
tatctaccgaagttgttactaggttgagtcacgaccaggtcgatctctttaagacgtttcgtggcactatccaaaattgtgcaaggcagactatcaatca |
49971445 |
T |
 |
| Q |
161 |
cgccgcctccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccttc-aatatggtactaag |
259 |
Q |
| |
|
|||||||||||||||||||||||| ||||| ||||||||| |||||||||| |||||||||||||||||||||||||||||| || ||||||||||| || |
|
|
| T |
49971444 |
cgccgcctccaggataaaacaagtccagctgcaactgtgcagttaactacttcactgtagaaaaccgttcgagaattacaccctcaaatatggtactgag |
49971345 |
T |
 |
| Q |
260 |
accactcttttaatactgaaaccact |
285 |
Q |
| |
|
||||||| |||||||||||||||||| |
|
|
| T |
49971344 |
accactc-tttaatactgaaaccact |
49971320 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 65 - 296
Target Start/End: Original strand, 20520027 - 20520262
Alignment:
| Q |
65 |
tatctatcgaagttgttactagattgagtcaagaccaggtcgtcctctttaatacgtttcgtgacactg----aaattgtataaggccgactatcaacca |
160 |
Q |
| |
|
|||||| ||||||||||||||| |||||||| ||||||||| |||||||| |||||||||| ||||| | ||||| |||| |||||||||||| |
|
|
| T |
20520027 |
tatctagcgaagttgttactaggttgagtcacgaccaggtcactctctttaagacgtttcgtggcactgcccaagattgtgcaagggagactatcaacca |
20520126 |
T |
 |
| Q |
161 |
cgccgcctccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccttc-aatatggtactaag |
259 |
Q |
| |
|
||||||||||| |||||||||||| ||||||||||||||||||||||||||| |||||||||||| |||||||| |||||||||| ||||| |||||||| |
|
|
| T |
20520127 |
cgccgcctccaagataaaacaagtccagctacaactgtgcggttaactactgtactgtagaaaactgttcgagatttacaccttcaaatatagtactaag |
20520226 |
T |
 |
| Q |
260 |
accactcttttaatactgaaaccactccaatatggta |
296 |
Q |
| |
|
||||||| |||||||||||||||||| ||||||||| |
|
|
| T |
20520227 |
accactc-tttaatactgaaaccactttaatatggta |
20520262 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 65 - 296
Target Start/End: Complemental strand, 39775848 - 39775613
Alignment:
| Q |
65 |
tatctatcgaagttgttactagattgagtcaagaccaggtcgtcctctttaatacgtttcgtgacactg----aaattgtataaggccgactatcaacca |
160 |
Q |
| |
|
|||||| |||||||| |||||| |||||||| |||||||||| |||||||| |||||||||| ||||| ||||||| ||||| |||||||||||| |
|
|
| T |
39775848 |
tatctaccgaagttgctactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattgtgcaaggcagactatcaacca |
39775749 |
T |
 |
| Q |
161 |
cgccgcctccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccttc-aatatggtactaag |
259 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||||| || |||||||||||||||||||||| ||||||| |||||||||| | |||||||||||||| |
|
|
| T |
39775748 |
cgccgcctccaggataaaacaagctcagctacaactgttcgattaactactgcactgtagaaaatcgttcgaaaattacacctccaaatatggtactaag |
39775649 |
T |
 |
| Q |
260 |
accactcttttaatactgaaaccactccaatatggta |
296 |
Q |
| |
|
|| |||| |||| ||||||||||||| ||||||||| |
|
|
| T |
39775648 |
acaactc-tttactactgaaaccactttaatatggta |
39775613 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 73 - 269
Target Start/End: Original strand, 55431296 - 55431497
Alignment:
| Q |
73 |
gaagttgttactagattgagtcaagaccaggtcgtcctctttaatacgtttcgtgacactg----aaattgtataaggccgactatcaaccacgccgcct |
168 |
Q |
| |
|
|||||||||| ||| |||||||| || ||||||| |||||||| |||||||||||||||| ||||| | ||||| |||||||||||||||||||| |
|
|
| T |
55431296 |
gaagttgttattaggttgagtcacgatcaggtcgctctctttaagacgtttcgtgacactgtcaaaaattatgcaaggcagactatcaaccacgccgcct |
55431395 |
T |
 |
| Q |
169 |
ccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccttc-aatatggtactaagaccactct |
267 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||| |||| || |||||||||||||||||||||| |
|
|
| T |
55431396 |
ccaggataaaacaagtccagctacaactgtgcggttaactactgcactgtagaaaactgttcgagaattgcaccctcaaatatggtactaagaccactct |
55431495 |
T |
 |
| Q |
268 |
tt |
269 |
Q |
| |
|
|| |
|
|
| T |
55431496 |
tt |
55431497 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 65 - 296
Target Start/End: Original strand, 18467198 - 18467433
Alignment:
| Q |
65 |
tatctatcgaagttgttactagattgagtcaagaccaggtcgtcctctttaatacgtttcgtgacactg----aaattgtataaggccgactatcaacca |
160 |
Q |
| |
|
|||||| ||||||||||||||| |||||||| |||||||||| |||||||| |||||||||| ||||| ||||||| ||||| |||||| ||||| |
|
|
| T |
18467198 |
tatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattgtgcaaggcagactattaacca |
18467297 |
T |
 |
| Q |
161 |
cgccgcctccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccttc-aatatggtactaag |
259 |
Q |
| |
|
|||||||||||||||||||||||| || |||||| ||| || |||||||||||||||||||||| |||||||||||||||| | | |||||||||||||| |
|
|
| T |
18467298 |
cgccgcctccaggataaaacaagtccaactacaattgttcgattaactactgcactgtagaaaatcgttcgagaattacacttccaaatatggtactaag |
18467397 |
T |
 |
| Q |
260 |
accactcttttaatactgaaaccactccaatatggta |
296 |
Q |
| |
|
||||||| |||||||||||||||| | ||||||||| |
|
|
| T |
18467398 |
accactc-tttaatactgaaaccattttaatatggta |
18467433 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 150 - 283
Target Start/End: Complemental strand, 6596388 - 6596255
Alignment:
| Q |
150 |
actatcaaccacgccgcctccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccttcaata |
249 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |||||||||| | || |||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
6596388 |
actatcaaccacgccgcctccaggataaaacaagctcagctacaattatgtggttaactactgcattgtagaaaaccgttcgagaattacaccttcaata |
6596289 |
T |
 |
| Q |
250 |
tggtactaagaccactcttttaatactgaaacca |
283 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |
|
|
| T |
6596288 |
tggtactaagaccactcttttaatactgaaacca |
6596255 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 66 - 296
Target Start/End: Complemental strand, 12965992 - 12965758
Alignment:
| Q |
66 |
atctatcgaagttgttactagattgagtcaagaccaggtcgtcctctttaatacgtttcgtgacactg----aaattgtataaggccgactatcaaccac |
161 |
Q |
| |
|
||||| |||||||||||||||||||||||| ||||||||| |||||||| |||||| || ||||| ||||||| ||| | ||||||||||||| |
|
|
| T |
12965992 |
atctaccgaagttgttactagattgagtcacaaccaggtcgctctctttaagacgttttatggcactgcccaaaattgtgcaagacagactatcaaccac |
12965893 |
T |
 |
| Q |
162 |
gccgcctccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccttcaatatggtactaagac |
261 |
Q |
| |
|
||||||||||||||||||||||| || |||||| ||| || ||||||| ||||||||||||||| |||| |||||||||||| ||||||||||| ||||| |
|
|
| T |
12965892 |
gccgcctccaggataaaacaagtccaactacaattgttcgattaactaatgcactgtagaaaactgttcaagaattacacctccaatatggtaccaagac |
12965793 |
T |
 |
| Q |
262 |
cactcttttaatactgaaaccactccaatatggta |
296 |
Q |
| |
|
|| ||||||||||||||||||||| ||||||||| |
|
|
| T |
12965792 |
cattcttttaatactgaaaccactttaatatggta |
12965758 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #19
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 65 - 296
Target Start/End: Original strand, 18471981 - 18472215
Alignment:
| Q |
65 |
tatctatcgaagttgttactagattgagtcaagaccaggtcgtcctctttaatacgtttcgtgacactg----aaattgtataaggccgactatcaacca |
160 |
Q |
| |
|
|||||| ||||||||||||||| |||||||| |||||||||| ||||||| | ||| |||| ||||| ||||||| ||||| |||||||||||| |
|
|
| T |
18471981 |
tatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttacgatgtt-cgtggcactgcctaaaattgtgcaaggcagactatcaacca |
18472079 |
T |
 |
| Q |
161 |
cgccgcctccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccttc-aatatggtactaag |
259 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||| || |||||||||||| ||||||||| |||||||||||||||||| | |||||||||||||| |
|
|
| T |
18472080 |
cgccgcctccaggataaaacaagcccagctacaactgttcgattaactactgcattgtagaaaatcgttcgagaattacacctccaaatatggtactaag |
18472179 |
T |
 |
| Q |
260 |
accactcttttaatactgaaaccactccaatatggta |
296 |
Q |
| |
|
||||||| |||||||||||||||||| ||||||||| |
|
|
| T |
18472180 |
accactc-tttaatactgaaaccactttaatatggta |
18472215 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #20
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 33 - 285
Target Start/End: Complemental strand, 12112793 - 12112537
Alignment:
| Q |
33 |
tttggtttttcaaattctattttaaaagagaatatctatcgaagttgttactagattgagtcaagaccaggtcgtcctctttaatacgtttcgtgacact |
132 |
Q |
| |
|
||||| ||||||||||||||||||||| ||||||||| ||||||||||||||| |||| ||| ||| |||||| |||||||| |||||||||| |||| |
|
|
| T |
12112793 |
tttggattttcaaattctattttaaaaaggaatatctaccgaagttgttactaggttgaatcacgactaggtcgctctctttaagacgtttcgtggcact |
12112694 |
T |
 |
| Q |
133 |
g----aaattgtataaggccgactatcaaccacgccgcctccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgt |
228 |
Q |
| |
|
| || |||| ||| | ||||||||||||| ||||||||||||||||||||| ||| |||||| || | |||||||| || |||||||||||||| | |
|
|
| T |
12112693 |
gtccaaagttgtgcaagacagactatcaaccacaccgcctccaggataaaacaagctcaactacaaatgggtggttaactgctacactgtagaaaaccat |
12112594 |
T |
 |
| Q |
229 |
tcgagaattacaccttcaatatggtactaagaccactcttttaatactgaaaccact |
285 |
Q |
| |
|
|||||| |||||||| ||||||||| | ||||| | |||||||||||| |||||||| |
|
|
| T |
12112593 |
tcgagatttacacctccaatatggtgcaaagactattcttttaatacttaaaccact |
12112537 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #21
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 134 - 296
Target Start/End: Complemental strand, 23661511 - 23661349
Alignment:
| Q |
134 |
aaattgtataaggccgactatcaaccacgccgcctccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgag |
233 |
Q |
| |
|
||||||| ||||| ||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
23661511 |
aaattgtgcaaggcagactatcaaccacgccgcctccaggataaaacaagcccagctgcaactgtgcggttaactaatgcactgtagaaaaccgttcgag |
23661412 |
T |
 |
| Q |
234 |
aattacaccttc-aatatggtactaagaccactcttttaatactgaaaccactccaatatggta |
296 |
Q |
| |
|
||||||||| || ||||||||||||||||||||| |||||||||||||||||| ||||||||| |
|
|
| T |
23661411 |
aattacaccctcaaatatggtactaagaccactc-tttaatactgaaaccactttaatatggta |
23661349 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #22
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 65 - 269
Target Start/End: Original strand, 29350213 - 29350422
Alignment:
| Q |
65 |
tatctatcgaagttgttactagattgagtcaagaccaggtcgtcctctttaatacgtttcgtgacactg----aaattgtataaggccgactatcaacca |
160 |
Q |
| |
|
|||||| ||||||||||||||| |||||||| ||||| |||| ||||||| |||||||||| ||||| ||||||| ||||| ||| ||| |||| |
|
|
| T |
29350213 |
tatctaccgaagttgttactaggttgagtcacgaccatgtcgctttctttaagacgtttcgtggcactgcccaaaattgtgcaaggcagaccatctacca |
29350312 |
T |
 |
| Q |
161 |
cgccgcctccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccttc-aatatggtactaag |
259 |
Q |
| |
|
|||||||||||||||||||||| ||| ||||||||||| |||||| ||||||||||||||||||||||||||||||||||| || |||||||||||||| |
|
|
| T |
29350313 |
tgccgcctccaggataaaacaagctcaactacaactgtgtggttaattactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaag |
29350412 |
T |
 |
| Q |
260 |
accactcttt |
269 |
Q |
| |
|
|||||||||| |
|
|
| T |
29350413 |
accactcttt |
29350422 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #23
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 65 - 285
Target Start/End: Complemental strand, 32474798 - 32474575
Alignment:
| Q |
65 |
tatctatcgaagttgttactagattgagtcaagaccaggtcgtcctctttaatacgtttcgtgacactg----aaattgtataaggccgactatcaacca |
160 |
Q |
| |
|
|||||| ||||||||||||||||||||| || |||||||||| |||| ||| |||||||||| ||||| ||||||| ||| | |||||||||||| |
|
|
| T |
32474798 |
tatctaccgaagttgttactagattgagccacgaccaggtcg--ctctctaagacgtttcgtggcactgcccaaaattgtgcaagacagactatcaacca |
32474701 |
T |
 |
| Q |
161 |
cgccgcctccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacacct-tcaatatggtact-aa |
258 |
Q |
| |
|
||||| ||||||||||||||||| ||||||||||||| || |||||||||||||||||||||| ||||||||||||| |||| | ||||||||||| || |
|
|
| T |
32474700 |
cgccgtctccaggataaaacaagcccagctacaactgttcgattaactactgcactgtagaaaatcgttcgagaattatacctctaaatatggtactaaa |
32474601 |
T |
 |
| Q |
259 |
gaccactcttttaatactgaaaccact |
285 |
Q |
| |
|
|||||||| |||||||||||||||||| |
|
|
| T |
32474600 |
gaccactc-tttaatactgaaaccact |
32474575 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #24
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 65 - 285
Target Start/End: Original strand, 3418968 - 3419191
Alignment:
| Q |
65 |
tatctatcgaagttgttactagattgagtcaagaccaggtcgtcctctttaatacgtttcgtgacactg----aaattgtataaggccgactatcaacca |
160 |
Q |
| |
|
|||||| ||||||||||||||| |||||||| ||||| |||| |||||||| |||||||||| ||||| ||||||| ||||| |||||||||||| |
|
|
| T |
3418968 |
tatctaccgaagttgttactaggttgagtcacgaccaagtcgctctctttaagacgtttcgtggcactgcccaaaattgtgcaaggcagactatcaacca |
3419067 |
T |
 |
| Q |
161 |
cgccgcctccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccttc-aatatggtactaag |
259 |
Q |
| |
|
|||| ||| |||||||||||||| ||| || |||||||||||||||||| |||| ||||||||||||| |||| ||||||| || |||||||||||||| |
|
|
| T |
3419068 |
cgccaccttcaggataaaacaagctcaactgcaactgtgcggttaactattgcatcgtagaaaaccgtttgagatttacaccctcaaatatggtactaag |
3419167 |
T |
 |
| Q |
260 |
accactcttttaatactgaaaccact |
285 |
Q |
| |
|
||||||| ||||||||||||||||| |
|
|
| T |
3419168 |
accactc--ttaatactgaaaccact |
3419191 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #25
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 66 - 298
Target Start/End: Complemental strand, 12971752 - 12971516
Alignment:
| Q |
66 |
atctatcgaagttgttactagattgagtcaagaccaggtcgtcctctttaatacgtttcgtgacactg----aaattgtataaggccgactatcaaccac |
161 |
Q |
| |
|
||||||||||||||||||||| |||| ||| ||||||||| |||||||| |||||||||| || || ||||||| ||| | || |||||| ||| |
|
|
| T |
12971752 |
atctatcgaagttgttactaggttgactcacgaccaggtctctctctttaagacgtttcgtggcattgcccaaaattgtgcaagacagattatcaatcac |
12971653 |
T |
 |
| Q |
162 |
gccgcctccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccttcaatatggtactaagac |
261 |
Q |
| |
|
|||||||| ||||||||||||| || |||||||||| | |||||||||||| |||||||||||||||||||||||||||| ||||||||||| ||||| |
|
|
| T |
12971652 |
gccgcctctaggataaaacaagcccaactacaactgttcaattaactactgcattgtagaaaaccgttcgagaattacacctccaatatggtaccaagac |
12971553 |
T |
 |
| Q |
262 |
cactcttttaatactgaaaccactccaatatggtact |
298 |
Q |
| |
|
| |||||||||||| |||||||| ||||||||||| |
|
|
| T |
12971552 |
taatcttttaatactaaaaccactttaatatggtact |
12971516 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #26
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 149 - 284
Target Start/End: Original strand, 27708997 - 27709132
Alignment:
| Q |
149 |
gactatcaaccacgccgcctccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccttc-aa |
247 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| || || |
|
|
| T |
27708997 |
gactatcaaccacgccgcctccaggataaaacaagcccagcttcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaa |
27709096 |
T |
 |
| Q |
248 |
tatggtactaagaccactcttttaatactgaaaccac |
284 |
Q |
| |
|
||||||||||||| ||||| || |||||||||||||| |
|
|
| T |
27709097 |
tatggtactaagatcactc-ttcaatactgaaaccac |
27709132 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #27
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 65 - 285
Target Start/End: Complemental strand, 3657360 - 3657136
Alignment:
| Q |
65 |
tatctatcgaagttgttactagattgagtcaagaccaggtcgtcctctttaatacgtttcgtgacactg----aaattgtataaggccgactatcaacca |
160 |
Q |
| |
|
|||||| |||||||||||||| |||||||| || || ||| |||||||| |||||||||| ||||| ||||||| ||| | |||||||||||| |
|
|
| T |
3657360 |
tatctaccgaagttgttactatgttgagtcacgattagatcgctctctttaagacgtttcgtggcactgttcaaaattgtgcaagacagactatcaacca |
3657261 |
T |
 |
| Q |
161 |
cgccgcctccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattaca-ccttcaatatggtactaag |
259 |
Q |
| |
|
||| |||||| |||||||||||| ||||||||||||| | |||||||||||||||||||||| ||||||||||||||| |||| |||||||||||||| |
|
|
| T |
3657260 |
tgccacctccaagataaaacaagtccagctacaactgttagattaactactgcactgtagaaaatcgttcgagaattacacccttaaatatggtactaag |
3657161 |
T |
 |
| Q |
260 |
accactcttttaatactgaaaccact |
285 |
Q |
| |
|
||||||| |||||| ||||||||||| |
|
|
| T |
3657160 |
accactc-tttaatgctgaaaccact |
3657136 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #28
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 155 - 296
Target Start/End: Complemental strand, 25726816 - 25726674
Alignment:
| Q |
155 |
caaccacgccgcctccaggataa--aacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccttcaatatgg |
252 |
Q |
| |
|
||||||||||||||| |||| | ||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||| |
|
|
| T |
25726816 |
caaccacgccgcctctaggaggataaacaagtgcagttacaactgtgcggttaactactgcactgtagaaaaccgttcgagatttacacctccaatatgg |
25726717 |
T |
 |
| Q |
253 |
tactaagaccactcttttaatactgaaaccactccaatatggta |
296 |
Q |
| |
|
|||||||||||||| || |||||||||| || || ||||||||| |
|
|
| T |
25726716 |
tactaagaccactc-ttaaatactgaaatcattctaatatggta |
25726674 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #29
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 5 - 212
Target Start/End: Original strand, 28125030 - 28125242
Alignment:
| Q |
5 |
ttgtttttggaattctaaattgttgtattttggtttttcaaattctattttaaaagagaatatctatcgaagttgttactagattgagtcaagaccaggt |
104 |
Q |
| |
|
|||||||| || ||| ||| ||||||||||||||||| |||||||||||| ||||||||||||||||||| |||||||||| |||||||| |||||||| |
|
|
| T |
28125030 |
ttgtttttagatttccaaagtgttgtattttggttttctaaattctattttgaaagagaatatctatcgaaattgttactaggttgagtcacgaccaggt |
28125129 |
T |
 |
| Q |
105 |
cgtcctctttaatacgtttcgtgacactg----aaattgtataaggccgactatcaaccacgccgcctccaggat--aaaacaagttcagctacaactgt |
198 |
Q |
| |
|
| || ||||| || ||||||| ||||| ||||||| ||| | |||||| |||||| | ||||||||||| |||||||||||| |||||| ||| |
|
|
| T |
28125130 |
tgctct-tttaagacatttcgtggcactgcttaaaattgtgcaagacagactattaaccacactgcctccaggattaaaaacaagttcaactacaattgt |
28125228 |
T |
 |
| Q |
199 |
gcggttaactactg |
212 |
Q |
| |
|
||||| |||||||| |
|
|
| T |
28125229 |
gcggtcaactactg |
28125242 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #30
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 159 - 285
Target Start/End: Original strand, 55325847 - 55325973
Alignment:
| Q |
159 |
cacgccgcctccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaa-ccgttcgagaattaca-ccttcaatatggtact |
256 |
Q |
| |
|
||||||||||||||||||||||||| ||| |||||||||||||||||||| |||||||||||||| ||| |||||||||||| |||| |||| |||||| |
|
|
| T |
55325847 |
cacgccgcctccaggataaaacaagcccagttacaactgtgcggttaacta-tgcactgtagaaaacccgatcgagaattacacccttaaatacggtact |
55325945 |
T |
 |
| Q |
257 |
aagaccactcttttaatactgaaaccact |
285 |
Q |
| |
|
|||||||||| |||||||||||||||||| |
|
|
| T |
55325946 |
aagaccactc-tttaatactgaaaccact |
55325973 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #31
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 173 - 285
Target Start/End: Complemental strand, 2207757 - 2207645
Alignment:
| Q |
173 |
gataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccttc-aatatggtactaagaccactctttta |
271 |
Q |
| |
|
||||||||||| || |||||| ||||||||||||||||| ||||||||||||| ||||||||||||||| || ||||||||||||||||||||| |||| |
|
|
| T |
2207757 |
gataaaacaagcccatctacaattgtgcggttaactactgtactgtagaaaacccttcgagaattacaccctcaaatatggtactaagaccactc-ttta |
2207659 |
T |
 |
| Q |
272 |
atactgaaaccact |
285 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
2207658 |
atactgaaaccact |
2207645 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #32
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 65 - 218
Target Start/End: Original strand, 29715617 - 29715774
Alignment:
| Q |
65 |
tatctatcgaagttgttactagattgagtcaagaccaggtcgtcctctttaatacgtttcgtgacactg----aaattgtataaggccgactatcaacca |
160 |
Q |
| |
|
|||||| ||||||||||| ||| |||||||| |||||| ||| || ||||| |||||||||||||||| ||||||| ||| |||||||||||| |
|
|
| T |
29715617 |
tatctaccgaagttgttattaggttgagtcacgaccagatcgctctttttaagacgtttcgtgacactgtccaaaattgtgctaggaagactatcaacca |
29715716 |
T |
 |
| Q |
161 |
cgccgcctccaggataaaacaagttcagctacaactgtgcggttaactactgcactgt |
218 |
Q |
| |
|
||||||||| |||||||||||||| |||||||| ||||||||||||||| |||||||| |
|
|
| T |
29715717 |
cgccgcctctaggataaaacaagtccagctacagctgtgcggttaactattgcactgt |
29715774 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #33
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 149 - 285
Target Start/End: Original strand, 46964076 - 46964212
Alignment:
| Q |
149 |
gactatcaaccacgccgcctccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccttc-aa |
247 |
Q |
| |
|
|||||||| ||| ||| |||| |||||||||||| |||| ||||||| || ||||||||| |||||| ||||||||||||||||| ||||||| || || |
|
|
| T |
46964076 |
gactatcacccatgccacctctaggataaaacaaactcagatacaactatgtggttaactattgcactatagaaaaccgttcgagatttacaccctcaaa |
46964175 |
T |
 |
| Q |
248 |
tatggtactaagaccactcttttaatactgaaaccact |
285 |
Q |
| |
|
||||||| ||||||||||| |||||||||||||||||| |
|
|
| T |
46964176 |
tatggtattaagaccactc-tttaatactgaaaccact |
46964212 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #34
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 149 - 283
Target Start/End: Complemental strand, 47567227 - 47567093
Alignment:
| Q |
149 |
gactatcaaccacgccgcctccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccttcaat |
248 |
Q |
| |
|
|||||||||||| |||||||| ||||||||||||||| ||||| ||| | |||||| |||||||||||||| | ||||||||||||| || |||| |
|
|
| T |
47567227 |
gactatcaaccataccgcctccgagataaaacaagttcattgacaacggtgtgaataactattgcactgtagaaaatccttcgagaattacatctccaat |
47567128 |
T |
 |
| Q |
249 |
atggtactaagaccactcttttaatactgaaacca |
283 |
Q |
| |
|
||| |||||||| |||| ||||||||| ||||||| |
|
|
| T |
47567127 |
atgatactaagagcactattttaataccgaaacca |
47567093 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #35
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 171 - 308
Target Start/End: Complemental strand, 17026115 - 17025980
Alignment:
| Q |
171 |
aggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccttcaatatggtactaagaccactctttt |
270 |
Q |
| |
|
|||||||||||||||||||||||| ||||||| |||||||||||| ||||||||| || || | |||||||| |||||||| |||| ||||||| ||| |
|
|
| T |
17026115 |
aggataaaacaagttcagctacaattgtgcgg-taactactgcacggtagaaaacaatttgacacatacacctttaatatggtcctaataccactc-ttt |
17026018 |
T |
 |
| Q |
271 |
aatactgaaaccactccaatatggtactaagaccactc |
308 |
Q |
| |
|
|||| ||||| ||||| |||||||| || |||||||| |
|
|
| T |
17026017 |
aatattgaaatcactctaatatggtgctgtgaccactc |
17025980 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #36
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 189 - 281
Target Start/End: Original strand, 28125244 - 28125335
Alignment:
| Q |
189 |
ctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccttcaatatggtactaagaccactcttttaatactgaaac |
281 |
Q |
| |
|
|||||| |||||||| |||||||| |||||||||||| ||||||| ||||||||| |||||||||| |||||| |||||||||||| |||||| |
|
|
| T |
28125244 |
ctacaattgtgcggtcaactactg-actgtagaaaacagttcgagtattacacctccaatatggtattaagacaactcttttaatattgaaac |
28125335 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #37
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 134 - 308
Target Start/End: Complemental strand, 19276967 - 19276794
Alignment:
| Q |
134 |
aaattgtataaggccgactatcaaccacgccgcctccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgag |
233 |
Q |
| |
|
||||||| |||| | |||||||||||||| ||||| || |||||||||| ||| || |||| |||||||| |||||||| ||| ||||| ||||||| |
|
|
| T |
19276967 |
aaattgtgtaagacagactatcaaccacgttgcctctagaataaaacaagctcaattaaaactatgcggttagctactgcaatgttgaaaattgttcgag |
19276868 |
T |
 |
| Q |
234 |
aattacaccttcaatatggtactaagaccactcttttaatactgaaaccactccaatatggtactaagaccactc |
308 |
Q |
| |
|
| |||||||| |||||| ||| ||||| ||||||| ||||| | |||| || |||||| ||||| ||| |||| |
|
|
| T |
19276867 |
atttacacctctaatatgatacgaagacatctctttt-atactaacaccagtctaatatgatactatgactactc |
19276794 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #38
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 149 - 308
Target Start/End: Original strand, 16013771 - 16013922
Alignment:
| Q |
149 |
gactatcaaccacgccgcctccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccttcaat |
248 |
Q |
| |
|
||||||| ||||||||||||||||||||||| ||| ||| |||||| |||| | | ||||| | ||||| | |||||||||||||||| |||| |
|
|
| T |
16013771 |
gactatccaccacgccgcctccaggataaaataagctcatctacaattgtgtagat-------gcactattgaaaatcattcgagaattacacctccaat |
16013863 |
T |
 |
| Q |
249 |
atggtactaagaccactcttttaatactgaaaccactccaatatggtactaagaccactc |
308 |
Q |
| |
|
|||||| ||| |||| | |||||||| |||||||| || | |||||||||| |||||||| |
|
|
| T |
16013864 |
atggtagtaacacca-tattttaatattgaaaccaatcaattatggtactatgaccactc |
16013922 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #39
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 72 - 133
Target Start/End: Original strand, 27708858 - 27708919
Alignment:
| Q |
72 |
cgaagttgttactagattgagtcaagaccaggtcgtcctctttaatacgtttcgtgacactg |
133 |
Q |
| |
|
||||||||||||||| |||||||| ||||||||||| |||||||| |||||||||| ||||| |
|
|
| T |
27708858 |
cgaagttgttactaggttgagtcacgaccaggtcgttctctttaagacgtttcgtggcactg |
27708919 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #40
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 194 - 283
Target Start/End: Complemental strand, 9113267 - 9113177
Alignment:
| Q |
194 |
actgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccttcaatatgg-tactaagaccactcttttaatactgaaacca |
283 |
Q |
| |
|
|||||||| |||||||||||||||||| ||| | |||| |||||||||| | |||||| |||||| | || ||||||||||||||||||| |
|
|
| T |
9113267 |
actgtgcgattaactactgcactgtagctaactgctcgacaattacacctcctatatggttactaaaatcagtcttttaatactgaaacca |
9113177 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #41
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 231 - 285
Target Start/End: Complemental strand, 10708629 - 10708575
Alignment:
| Q |
231 |
gagaattacaccttcaatatggtactaagaccactcttttaatactgaaaccact |
285 |
Q |
| |
|
||||||||||| ||| |||||| |||||||||| ||||||||||||||||||||| |
|
|
| T |
10708629 |
gagaattacactttctatatgggactaagaccattcttttaatactgaaaccact |
10708575 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 44 - 125
Target Start/End: Complemental strand, 25726933 - 25726853
Alignment:
| Q |
44 |
aaattctattttaaaagagaatatctatcgaagttgttactagattgagtcaagaccaggtcgtcctctttaatacgtttcg |
125 |
Q |
| |
|
||||| |||||| ||| ||||||| || | ||||||| |||||||||||||| |||||||||| |||||||| |||||||| |
|
|
| T |
25726933 |
aaattttattttgaaaaagaatatataccaaagttgt-actagattgagtcacgaccaggtcgctctctttaagacgtttcg |
25726853 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 69 - 132
Target Start/End: Complemental strand, 2207823 - 2207760
Alignment:
| Q |
69 |
tatcgaagttgttactagattgagtcaagaccaggtcgtcctctttaatacgtttcgtgacact |
132 |
Q |
| |
|
|||||||||||| |||||||||||||| |||||||||| || ||||| |||||| ||| |||| |
|
|
| T |
2207823 |
tatcgaagttgtcactagattgagtcacgaccaggtcgctctttttaagacgtttagtggcact |
2207760 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 65 - 106
Target Start/End: Complemental strand, 23661570 - 23661529
Alignment:
| Q |
65 |
tatctatcgaagttgttactagattgagtcaagaccaggtcg |
106 |
Q |
| |
|
|||||| ||||||||||||||| |||||||| |||||||||| |
|
|
| T |
23661570 |
tatctaccgaagttgttactaggttgagtcacgaccaggtcg |
23661529 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 140; Significance: 3e-73; HSPs: 51)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 65 - 296
Target Start/End: Original strand, 31269009 - 31269244
Alignment:
| Q |
65 |
tatctatcgaagttgttactagattgagtcaagaccaggtcgtcctctttaatacgtttcgtgacactg----aaattgtataaggccgactatcaacca |
160 |
Q |
| |
|
|||||| ||||||||||||||| |||||||| |||||||||| |||||||| |||||||||| ||||| ||||||| ||||| |||||||||||| |
|
|
| T |
31269009 |
tatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcctaaaattgtgcaaggcagactatcaacca |
31269108 |
T |
 |
| Q |
161 |
cgccgcctccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccttc-aatatggtactaag |
259 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||| ||| |||||||||||||||||||||||||||||||||||||||||| || |||||||||||||| |
|
|
| T |
31269109 |
cgccgcctccaggataaaacaagtccagctacaaccgtgtggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaag |
31269208 |
T |
 |
| Q |
260 |
accactcttttaatactgaaaccactccaatatggta |
296 |
Q |
| |
|
||||||| |||||||||||||||||| ||||||||| |
|
|
| T |
31269209 |
accactc-tttaatactgaaaccactttaatatggta |
31269244 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 65 - 296
Target Start/End: Complemental strand, 37264684 - 37264449
Alignment:
| Q |
65 |
tatctatcgaagttgttactagattgagtcaagaccaggtcgtcctctttaatacgtttcgtgacactg----aaattgtataaggccgactatcaacca |
160 |
Q |
| |
|
|||||||||||||||||||||| |||||||| |||||||||| |||||||| |||||||||| ||||| ||||| | ||||| |||||||||||| |
|
|
| T |
37264684 |
tatctatcgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattatgcaaggcagactatcaacca |
37264585 |
T |
 |
| Q |
161 |
cgccgcctccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccttc-aatatggtactaag |
259 |
Q |
| |
|
||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||| |
|
|
| T |
37264584 |
cgccgcctccaggataaaacaagcccagctacaattgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaag |
37264485 |
T |
 |
| Q |
260 |
accactcttttaatactgaaaccactccaatatggta |
296 |
Q |
| |
|
||||||| |||||||||||||||||| ||||||||| |
|
|
| T |
37264484 |
accactc-tttaatactgaaaccactttaatatggta |
37264449 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 65 - 296
Target Start/End: Original strand, 31273496 - 31273731
Alignment:
| Q |
65 |
tatctatcgaagttgttactagattgagtcaagaccaggtcgtcctctttaatacgtttcgtgacactg----aaattgtataaggccgactatcaacca |
160 |
Q |
| |
|
|||||| ||||||||||||||| |||||||| |||||||||| |||||||| |||||||||| ||||| ||||||| ||| | |||||||||||| |
|
|
| T |
31273496 |
tatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattgtgcaagacagactatcaacca |
31273595 |
T |
 |
| Q |
161 |
cgccgcctccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccttc-aatatggtactaag |
259 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||| || |||||||||||||| |
|
|
| T |
31273596 |
cgccgcctccaggataaaacaagcccagctacaactgtgtggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaag |
31273695 |
T |
 |
| Q |
260 |
accactcttttaatactgaaaccactccaatatggta |
296 |
Q |
| |
|
||||||| |||||||||||||||||| ||||||||| |
|
|
| T |
31273696 |
accactc-tttaatactgaaaccactttaatatggta |
31273731 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 65 - 296
Target Start/End: Complemental strand, 37259997 - 37259762
Alignment:
| Q |
65 |
tatctatcgaagttgttactagattgagtcaagaccaggtcgtcctctttaatacgtttcgtgacactg----aaattgtataaggccgactatcaacca |
160 |
Q |
| |
|
|||||| ||||||||||||||| |||||||| |||||||||| ||||||| |||||||||| |||| ||||||| ||||| |||||||||||| |
|
|
| T |
37259997 |
tatctaccgaagttgttactaggttgagtcacgaccaggtcgctttctttaagacgtttcgtggcactactcaaaattgtgcaaggcagactatcaacca |
37259898 |
T |
 |
| Q |
161 |
cgccgcctccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccttc-aatatggtactaag |
259 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||| |
|
|
| T |
37259897 |
cgccgcctccaggataaaacaagcccagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaag |
37259798 |
T |
 |
| Q |
260 |
accactcttttaatactgaaaccactccaatatggta |
296 |
Q |
| |
|
||||||| |||||||||||||||||| ||||||||| |
|
|
| T |
37259797 |
accactc-tttaatactgaaaccactttaatatggta |
37259762 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 5 - 297
Target Start/End: Original strand, 12878155 - 12878449
Alignment:
| Q |
5 |
ttgtttttggaattctaaattgttgtattttggtttttcaaattctattttaaaagagaatatctatcgaagttgttactagattgagtcaagaccaggt |
104 |
Q |
| |
|
||||||||||| ||| |||||||| ||||| |||| ||||||||||||| | |||||||||||| |||||||||||||| |||||||| || ||||| |
|
|
| T |
12878155 |
ttgtttttggatttccaaattgttatatttgggttcc-caaattctattttgatagagaatatctacggaagttgttactaggttgagtcacgatcaggt |
12878253 |
T |
 |
| Q |
105 |
cgtcctctttaatacgtttcgtgacactg----aaattgtataaggccgactatcaaccacgccgcctccaggataaaacaagttcagctacaactgtgc |
200 |
Q |
| |
|
|| |||||||| ||||||||||||||| ||||||| || || ||||||||| |||||| ||||||| |||||||||||||||||||||||||| |
|
|
| T |
12878254 |
cgctctctttaagacgtttcgtgacacttttcaaaattgtgcaaagcagactatcaatcacgccacctccagaataaaacaagttcagctacaactgtgt |
12878353 |
T |
 |
| Q |
201 |
ggttaactactgcactgtagaaaaccgttcgagaattacaccttcaatatggtactaagaccactcttttaatactgaaaccactccaatatggtac |
297 |
Q |
| |
|
||||| |||||||| ||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| |||||| |||| | |||||||| |
|
|
| T |
12878354 |
tgttaattactgcac-gtagaaaaccgttcgagaattacacctccaatatgatactaagaccactcttttaatgttgaaacgactctagtatggtac |
12878449 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 67 - 308
Target Start/End: Complemental strand, 13522110 - 13521867
Alignment:
| Q |
67 |
tctatcgaagttgttactagattgagtcaagaccaggtcgtcctctttaatacgtttcgtgacactg----aaattgtataaggccgactatcaaccacg |
162 |
Q |
| |
|
|||| ||||||||||||||| |||||||| |||||||||| |||||||| |||||||||| ||||| ||||||| ||| | |||||||||||||| |
|
|
| T |
13522110 |
tctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattgtgcaagacagactatcaaccacg |
13522011 |
T |
 |
| Q |
163 |
ccgcctccaggataaaacaagttcagctac---aactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccttcaatatggtactaag |
259 |
Q |
| |
|
|||||||||||||||||||||| ||||| | |||||| ||||| |||||||||||||||||||||||||||||||||||| || |||||||||||||| |
|
|
| T |
13522010 |
ccgcctccaggataaaacaagtccagctgctgcaactgtacggttgactactgcactgtagaaaaccgttcgagaattacacttttaatatggtactaag |
13521911 |
T |
 |
| Q |
260 |
accactcttttaatactgaaaccactccaatatggtactaagaccactc |
308 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||| |||||||| |
|
|
| T |
13521910 |
accactcttttaatactgaaa-----ccaatatggtactatgaccactc |
13521867 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 65 - 299
Target Start/End: Complemental strand, 33463476 - 33463238
Alignment:
| Q |
65 |
tatctatcgaagttgttactagattgagtcaagaccaggtcgtcctctttaatacgtttcgtgacactg----aaattgtataaggccgactatcaacca |
160 |
Q |
| |
|
|||||||||||||||||||||| |||||||| |||||||||| |||||||| |||||||||| ||||| || |||| ||||| || | |||||| |
|
|
| T |
33463476 |
tatctatcgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgtccaaagttgtgcaaggcagattgtcaaccc |
33463377 |
T |
 |
| Q |
161 |
cgccgcctccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccttcaatatggtactaaga |
260 |
Q |
| |
|
||||||||||||||||||||||| || |||||||||| || |||||||||||| |||||||||||||||||||||||||||||||||||||||| || | |
|
|
| T |
33463376 |
cgccgcctccaggataaaacaagcacaactacaactgttcgattaactactgcattgtagaaaaccgttcgagaattacaccttcaatatggtaccaaaa |
33463277 |
T |
 |
| Q |
261 |
ccactcttttaatactgaaaccactccaatatggtacta |
299 |
Q |
| |
|
||| ||||||||||||||||||||| ||||| |||||| |
|
|
| T |
33463276 |
ccattcttttaatactgaaaccactttaatattgtacta |
33463238 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 65 - 285
Target Start/End: Original strand, 16421004 - 16421228
Alignment:
| Q |
65 |
tatctatcgaagttgttactagattgagtcaagaccaggtcgtcctctttaatacgtttcgtgacactg----aaattgtataaggccgactatcaacca |
160 |
Q |
| |
|
|||||| ||||||||||||||| |||||||| |||||||||| ||| |||| || ||||||| ||||| ||||||| ||||| |||||||||||| |
|
|
| T |
16421004 |
tatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcattaagacatttcgtggcactgcccaaaattgtgcaaggcagactatcaacca |
16421103 |
T |
 |
| Q |
161 |
cgccgcctccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccttc-aatatggtactaag |
259 |
Q |
| |
|
|||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||| |||||||||||||| |
|
|
| T |
16421104 |
cgccgcctacaggataaaacaagcccagctacaactgtgcggttaactactgcactgtagaaaaccgtccgagatttacaccttcgaatatggtactaag |
16421203 |
T |
 |
| Q |
260 |
accactcttttaatactgaaaccact |
285 |
Q |
| |
|
||||||| ||||||| |||||||||| |
|
|
| T |
16421204 |
accactc-tttaatattgaaaccact |
16421228 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 65 - 296
Target Start/End: Original strand, 47244223 - 47244458
Alignment:
| Q |
65 |
tatctatcgaagttgttactagattgagtcaagaccaggtcgtcctctttaatacgtttcgtgacactg----aaattgtataaggccgactatcaacca |
160 |
Q |
| |
|
|||||||||||||||||| ||| |||||||| || ||||||| ||||||||| |||||||||| ||||| ||||| | ||| |||||||||||| |
|
|
| T |
47244223 |
tatctatcgaagttgttagtaggttgagtcacgatcaggtcgccctctttaagacgtttcgtggcactgttcaaaattattgaagaaagactatcaacca |
47244322 |
T |
 |
| Q |
161 |
cgccgcctccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccttc-aatatggtactaag |
259 |
Q |
| |
|
||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||| ||| | |||||||||||||| |
|
|
| T |
47244323 |
cgccgcctccaggataaaacaagcacaactacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattaaacccccaaatatggtactaag |
47244422 |
T |
 |
| Q |
260 |
accactcttttaatactgaaaccactccaatatggta |
296 |
Q |
| |
|
||||||| |||||||||||||||||| ||||||||| |
|
|
| T |
47244423 |
accactc-tttaatactgaaaccactttaatatggta |
47244458 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 67 - 296
Target Start/End: Original strand, 8693688 - 8693921
Alignment:
| Q |
67 |
tctatcgaagttgttactagattgagtcaagaccaggtcgtcctctttaatacgtttcgtgacactg----aaattgtataaggccgactatcaaccacg |
162 |
Q |
| |
|
|||||||||||||||||||| |||||||| |||||||||| |||||||| |||||||||| | || ||||||| ||| | ||||||||||||| |
|
|
| T |
8693688 |
tctatcgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcgctacccaaaattgtgcaagacatactatcaaccacg |
8693787 |
T |
 |
| Q |
163 |
ccgcctccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccttc-aatatggtactaagac |
261 |
Q |
| |
|
||||||| ||||||||||||| |||||||||||||| || |||||||||||||||||||||| |||||||||||||||||| | |||||||||||||||| |
|
|
| T |
8693788 |
ccgcctcaaggataaaacaagctcagctacaactgttcgattaactactgcactgtagaaaatcgttcgagaattacacctccaaatatggtactaagac |
8693887 |
T |
 |
| Q |
262 |
cactcttttaatactgaaaccactccaatatggta |
296 |
Q |
| |
|
||||| |||||||||||||||||| ||||||||| |
|
|
| T |
8693888 |
cactc-tttaatactgaaaccactttaatatggta |
8693921 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 150 - 298
Target Start/End: Complemental strand, 48276680 - 48276532
Alignment:
| Q |
150 |
actatcaaccacgccgcctccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccttcaata |
249 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||| |||||||||||||||| ||||| |
|
|
| T |
48276680 |
actatcaaccacgccgcctccaggataaaacaagttcagctacaactgttcgattaactactgcactgtagaaaaccattcgagaattacacctccaata |
48276581 |
T |
 |
| Q |
250 |
tggtactaagaccactcttttaatactgaaaccactccaatatggtact |
298 |
Q |
| |
|
|||||| ||||||| ||||||||||||||||||||| ||||||||||| |
|
|
| T |
48276580 |
tggtaccaagaccattcttttaatactgaaaccactttaatatggtact |
48276532 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 65 - 296
Target Start/End: Original strand, 55251695 - 55251929
Alignment:
| Q |
65 |
tatctatcgaagttgttactagattgagtcaagaccaggtcgtcctctttaatacgtttcgtgacactg----aaattgtataaggccgactatcaacca |
160 |
Q |
| |
|
||||||| |||||||||||||| |||||||| |||||||||| || ||||| |||||||||| ||||| ||||||| ||| | |||||||||||| |
|
|
| T |
55251695 |
tatctattgaagttgttactaggttgagtcacgaccaggtcgctct-tttaagacgtttcgtggcactgtccaaaattgtgcaagacagactatcaacca |
55251793 |
T |
 |
| Q |
161 |
cgccgcctccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacacc-ttcaatatggtactaag |
259 |
Q |
| |
|
|||| |||||||||||||||||| || |||||||||| ||||||||||||||||||||||||||||||||||| ||||||| || |||||||||||||| |
|
|
| T |
55251794 |
cgccacctccaggataaaacaagcccaactacaactgtacggttaactactgcactgtagaaaaccgttcgagatttacacctttgaatatggtactaag |
55251893 |
T |
 |
| Q |
260 |
accactcttttaatactgaaaccactccaatatggta |
296 |
Q |
| |
|
||||||| |||||||||||||||||| ||||||||| |
|
|
| T |
55251894 |
accactc-tttaatactgaaaccactttaatatggta |
55251929 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 65 - 296
Target Start/End: Original strand, 51697892 - 51698126
Alignment:
| Q |
65 |
tatctatcgaagttgttactagattgagtcaagaccaggtcgtcctctttaatacgtttcgtgacactg----aaattgtataaggccgactatcaacca |
160 |
Q |
| |
|
|||||| ||||||||||||||| |||||||| |||||| ||| || ||||| ||||||| |||||||| ||||||| ||||| |||||||||||| |
|
|
| T |
51697892 |
tatctaccgaagttgttactaggttgagtcacgaccagatcgctctttttaagacgtttcatgacactgctcaaaattgtgcaaggcagactatcaacca |
51697991 |
T |
 |
| Q |
161 |
cgccgcctccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccttc-aatatggtactaag |
259 |
Q |
| |
|
||||||||||||||||||||||| ||| |||||| |||||||||||||| |||||||||||||||||||||||||||||||| || |||||||||||||| |
|
|
| T |
51697992 |
cgccgcctccaggataaaacaagctcaactacaattgtgcggttaacta-tgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaag |
51698090 |
T |
 |
| Q |
260 |
accactcttttaatactgaaaccactccaatatggta |
296 |
Q |
| |
|
| ||||| ||||||| |||||| ||| ||||||||| |
|
|
| T |
51698091 |
atcactc-tttaatattgaaactactttaatatggta |
51698126 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #14
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 65 - 284
Target Start/End: Complemental strand, 5271539 - 5271316
Alignment:
| Q |
65 |
tatctatcgaagttgttactagattgagtcaagaccaggtcgtcctctttaatacgtttcgtgacactg----aaattgtataaggccgactatcaacca |
160 |
Q |
| |
|
|||||| ||||||||||||||| |||||||| |||||||||| |||||||| |||||||||| ||||| ||||||| ||| | |||||||||||| |
|
|
| T |
5271539 |
tatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattgtgcaagacagactatcaacca |
5271440 |
T |
 |
| Q |
161 |
cgccgcctccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccttc-aatatggtactaag |
259 |
Q |
| |
|
|||||||||||||||||||||||| || |||||||||| | || |||| |||||||||||||| |||||||||||||||||| | |||||||| ||||| |
|
|
| T |
5271439 |
cgccgcctccaggataaaacaagtccaactacaactgtttgattcactattgcactgtagaaaatcgttcgagaattacacctccaaatatggtgctaag |
5271340 |
T |
 |
| Q |
260 |
accactcttttaatactgaaaccac |
284 |
Q |
| |
|
||||||| ||||||||||||||||| |
|
|
| T |
5271339 |
accactc-tttaatactgaaaccac |
5271316 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #15
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 91 - 284
Target Start/End: Complemental strand, 31729481 - 31729284
Alignment:
| Q |
91 |
agtcaagaccaggtcgtcctctttaatacgtttcgtgacactg----aaattgtataaggccgactatcaaccacgccgcctccaggataaaacaagttc |
186 |
Q |
| |
|
||||| || ||||||| |||||||| |||||||||| |||| ||||||| ||||| ||| ||||| |||||||||||||||||||||||||| | |
|
|
| T |
31729481 |
agtcatgatcaggtcgctctctttaagacgtttcgtggcactacccaaaattgtgcaaggcagacaatcaatcacgccgcctccaggataaaacaagtcc |
31729382 |
T |
 |
| Q |
187 |
agctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccttc-aatatggtactaagaccactcttttaatactgaaaccac |
284 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
31729381 |
agctgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactc-tttaatactgaaaccac |
31729284 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #16
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 65 - 296
Target Start/End: Complemental strand, 5928339 - 5928104
Alignment:
| Q |
65 |
tatctatcgaagttgttactagattgagtcaagaccaggtcgtcctctttaatacgtttcgtgacactg----aaattgtataaggccgactatcaacca |
160 |
Q |
| |
|
|||||| |||||||||||| || |||||||| |||||||||| |||||||| | |||| ||| ||||| ||||||| ||||| |||||||||||| |
|
|
| T |
5928339 |
tatctaccgaagttgttaccaggttgagtcacgaccaggtcgctctctttaagatgtttagtggcactgctcaaaattgtgcaaggcagactatcaacca |
5928240 |
T |
 |
| Q |
161 |
cgccgcctccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccttc-aatatggtactaag |
259 |
Q |
| |
|
| ||||||||||||||||||||| ||||| ||||||| || |||||||||||||||||||||| ||||| |||||||||||| | |||||||||||||| |
|
|
| T |
5928239 |
caccgcctccaggataaaacaagcccagctgcaactgttcgattaactactgcactgtagaaaatcgttcaagaattacacctccaaatatggtactaag |
5928140 |
T |
 |
| Q |
260 |
accactcttttaatactgaaaccactccaatatggta |
296 |
Q |
| |
|
||||||| ||||||||| |||||||| ||||||||| |
|
|
| T |
5928139 |
accactc-tttaatacttaaaccactttaatatggta |
5928104 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #17
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 65 - 296
Target Start/End: Original strand, 13059385 - 13059619
Alignment:
| Q |
65 |
tatctatcgaagttgttactagattgagtcaagaccaggtcgtcctctttaatacgtttcgtgacactg----aaattgtataaggccgactatcaacca |
160 |
Q |
| |
|
|||||| ||||||| ||||||| |||||||| |||||| ||| |||||||| |||||||||| ||||| ||||||| ||| | |||||||||||| |
|
|
| T |
13059385 |
tatctaccgaagttattactaggttgagtcatgaccagatcgctctctttaagacgtttcgtggcactgcataaaattgtgcaagacagactatcaacca |
13059484 |
T |
 |
| Q |
161 |
cgccgcctccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccttc-aatatggtactaag |
259 |
Q |
| |
|
| ||||||| || |||||||||| ||||||||||||||| |||||||||||||| |||||||||||||||||| ||||||||||| |||||||| ||||| |
|
|
| T |
13059485 |
ctccgcctctagaataaaacaagctcagctacaactgtgtggttaactactgcattgtagaaaaccgttcgag-attacaccttcaaatatggttctaag |
13059583 |
T |
 |
| Q |
260 |
accactcttttaatactgaaaccactccaatatggta |
296 |
Q |
| |
|
||||||| ||||||| |||||||||| ||||||||| |
|
|
| T |
13059584 |
accactc-tttaatattgaaaccactttaatatggta |
13059619 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #18
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 65 - 296
Target Start/End: Original strand, 19101952 - 19102187
Alignment:
| Q |
65 |
tatctatcgaagttgttactagattgagtcaagaccaggtcgtcctctttaatacgtttcgtgacactg----aaattgtataaggccgactatcaacca |
160 |
Q |
| |
|
|||||||| ||||||||||||| || ||||| ||| ||||| || ||||| |||||||||| |||| ||||||| || | |||||||||||| |
|
|
| T |
19101952 |
tatctatcaaagttgttactaggttaagtcacgacgaggtcactctgtttaagacgtttcgtggcactactcaaaattgtgcaaaacagactatcaacca |
19102051 |
T |
 |
| Q |
161 |
cgccgcctccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccttc-aatatggtactaag |
259 |
Q |
| |
|
|| ||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||| |
|
|
| T |
19102052 |
cgtcgcctccaggataaaacaagtccaactacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtactaag |
19102151 |
T |
 |
| Q |
260 |
accactcttttaatactgaaaccactccaatatggta |
296 |
Q |
| |
|
||||||| ||||||||| |||||| | ||||||||| |
|
|
| T |
19102152 |
accactc-tttaatactaaaaccattttaatatggta |
19102187 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #19
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 73 - 299
Target Start/End: Complemental strand, 33469085 - 33468855
Alignment:
| Q |
73 |
gaagttgttactagattgagtcaagaccaggtcgtcctctttaatacgtttcgtgacactg----aaattgtataaggccgactatcaaccacgccgcct |
168 |
Q |
| |
|
|||||||||||||| |||||||| ||| ||||||| |||||||| |||||| ||| ||||| || |||| ||||| |||| ||||||||||| ||| |
|
|
| T |
33469085 |
gaagttgttactaggttgagtcacgactaggtcgttctctttaagacgttttgtggcactgcccaaagttgtgcaaggcagactgtcaaccacgccacct |
33468986 |
T |
 |
| Q |
169 |
ccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccttcaatatggtactaagaccactctt |
268 |
Q |
| |
|
||| ||||||||||| |||||||||| ||| || |||||||||||||||| ||| | ||| ||||||||||||| ||||||||||| ||||||| |||| |
|
|
| T |
33468985 |
ccatgataaaacaagctcagctacaattgttcgattaactactgcactgttgaataaggtttgagaattacacctccaatatggtaccaagaccattctt |
33468886 |
T |
 |
| Q |
269 |
ttaatactgaaaccactccaatatggtacta |
299 |
Q |
| |
|
||||||||||||||||| |||||||||||| |
|
|
| T |
33468885 |
ttaatactgaaaccactttaatatggtacta |
33468855 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #20
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 67 - 285
Target Start/End: Complemental strand, 12824013 - 12823797
Alignment:
| Q |
67 |
tctatcgaagttgttactagattgagtcaagaccaggtcgtcctctttaatacgtttcgtgacactg----aaattgtataaggccgactatcaaccacg |
162 |
Q |
| |
|
|||| ||||||||||| ||| |||||||| |||||||||| |||||||| || ||||||| ||||| ||||||| ||| | ||||||||||||| |
|
|
| T |
12824013 |
tctaccgaagttgttattaggttgagtcatgaccaggtcgctctctttaagacatttcgtggcactgcccaaaattgtgcaagacaaactatcaaccacg |
12823914 |
T |
 |
| Q |
163 |
ccgcctccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccttc-aatatggtactaagac |
261 |
Q |
| |
|
|||||||||||||||||||||| || ||| ||||| ||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||| |
|
|
| T |
12823913 |
ccgcctccaggataaaacaagtccatcta------tgcggctaactactgcactgtagaaaaccgttcgagatttacaccttcgaatatggtactaagac |
12823820 |
T |
 |
| Q |
262 |
cactcttttaatactgaaaccact |
285 |
Q |
| |
|
||||| |||||||||||||||||| |
|
|
| T |
12823819 |
cactc-tttaatactgaaaccact |
12823797 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #21
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 42 - 293
Target Start/End: Original strand, 12874491 - 12874746
Alignment:
| Q |
42 |
tcaaattctattttaaaagagaatatctatcgaagttgttactagattgagtcaagaccaggtcgtcctctttaatacgtttcgtgacactg----aaat |
137 |
Q |
| |
|
||||||| |||||| | |||||||||||| |||||||||| ||| |||||||| | ||| ||| |||||||| || |||||| ||||| |||| |
|
|
| T |
12874491 |
tcaaattttattttgatagagaatatctactgaagttgttattaggttgagtcacaatcagatcgctctctttaagacaattcgtggcactgtctaaaat |
12874590 |
T |
 |
| Q |
138 |
tgtataaggccgactatcaaccacgccgcctccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaatt |
237 |
Q |
| |
|
||| || || ||| ||||| ||||||||||||||||||||||||| ||||||| || |||||||||||||||| ||||||||||||||||| ||||| |
|
|
| T |
12874591 |
tgtgcaaagcagaccatcaatcacgccgcctccaggataaaacaagctcagctaaaattgtgcggttaactactacactgtagaaaaccgttaatgaatt |
12874690 |
T |
 |
| Q |
238 |
acaccttcaatatggtactaagaccactcttttaatactgaaaccactccaatatg |
293 |
Q |
| |
|
|||| | |||||||||| ||||||||| ||||||||||||||| || || |||||| |
|
|
| T |
12874691 |
acacttccaatatggtagtaagaccacccttttaatactgaaatcattctaatatg |
12874746 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #22
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 65 - 298
Target Start/End: Complemental strand, 8030596 - 8030359
Alignment:
| Q |
65 |
tatctatcgaagttgttactagattgagtcaagaccaggtcgtcctctttaatacgtttcgtgacactg----aaattgtataaggccgactatcaacca |
160 |
Q |
| |
|
|||||| ||||||||||||||| |||| ||| | ||||||| |||||||| |||||| ||| ||||| ||||||| ||| |||||||||| | |
|
|
| T |
8030596 |
tatctaccgaagttgttactaggttgaatcacaatcaggtcgctctctttaagacgttttgtggcactgcccaaaattgtgcaagatagactatcaacaa |
8030497 |
T |
 |
| Q |
161 |
cgccgcctccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccttcaatatggtactaaga |
260 |
Q |
| |
|
||| ||||||||||||||||||| ||||||||| ||| || |||||||||||||||||||||||||||||| |||||||||| ||||||| ||| |||| |
|
|
| T |
8030496 |
cgctgcctccaggataaaacaagcccagctacaaatgttcgattaactactgcactgtagaaaaccgttcgaaaattacacctccaatatgataccaaga |
8030397 |
T |
 |
| Q |
261 |
ccactcttttaatactgaaaccactccaatatggtact |
298 |
Q |
| |
|
|| |||||||||||| |||||| | ||||||||||| |
|
|
| T |
8030396 |
tcattcttttaatactaaaaccattttaatatggtact |
8030359 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #23
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 134 - 285
Target Start/End: Complemental strand, 19541208 - 19541057
Alignment:
| Q |
134 |
aaattgtataaggccgactatcaaccacgccgcctccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgag |
233 |
Q |
| |
|
|||||||| ||| | |||||||||||||||||||| |||||||||||||| |||||||||| || || |||||||||||| |||||||||||||||||| |
|
|
| T |
19541208 |
aaattgtacaagacagactatcaaccacgccgcctataggataaaacaagtccagctacaacagttcgattaactactgcattgtagaaaaccgttcgag |
19541109 |
T |
 |
| Q |
234 |
aattacaccttc-aatatggtactaagaccactcttttaatactgaaaccact |
285 |
Q |
| |
|
|||||||||| | ||||||||||||||||||||| ||||||| |||||||||| |
|
|
| T |
19541108 |
aattacacctccaaatatggtactaagaccactc-tttaatattgaaaccact |
19541057 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #24
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 168 - 283
Target Start/End: Complemental strand, 8649643 - 8649528
Alignment:
| Q |
168 |
tccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccttcaatatggtactaagaccactct |
267 |
Q |
| |
|
|||||||||||||||| | ||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
8649643 |
tccaggataaaacaagcctaactacaactgtgcggttaactactacactgtagaaaactgttcgagaattacaccttcaatatggtactaacaccactct |
8649544 |
T |
 |
| Q |
268 |
tttaatactgaaacca |
283 |
Q |
| |
|
|||||||||||||||| |
|
|
| T |
8649543 |
tttaatactgaaacca |
8649528 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #25
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 168 - 283
Target Start/End: Complemental strand, 8661450 - 8661335
Alignment:
| Q |
168 |
tccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccttcaatatggtactaagaccactct |
267 |
Q |
| |
|
|||||||||||||||| | ||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
8661450 |
tccaggataaaacaagcctaactacaactgtgcggttaactactacactgtagaaaactgttcgagaattacaccttcaatatggtactaacaccactct |
8661351 |
T |
 |
| Q |
268 |
tttaatactgaaacca |
283 |
Q |
| |
|
|||||||||||||||| |
|
|
| T |
8661350 |
tttaatactgaaacca |
8661335 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #26
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 65 - 296
Target Start/End: Original strand, 19906226 - 19906460
Alignment:
| Q |
65 |
tatctatcgaagttgttactagattgagtcaagaccaggtcgtcctctttaatacgtttcgtgacactg----aaattgtataaggccgactatcaacca |
160 |
Q |
| |
|
|||||| ||||||| ||| ||| |||||||| || ||||||| || ||||| ||||| ||||||||| ||||||| ||| | |||||||||| |
|
|
| T |
19906226 |
tatctaccgaagttattattaggttgagtcacgatcaggtcgctctttttaagacgttcagtgacactgtctaaaattgtgcaagacagactatcaactc |
19906325 |
T |
 |
| Q |
161 |
cgccgcctccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccttcaatatggtactaaga |
260 |
Q |
| |
|
||||||||||||||||||||||| ||| |||||||||| | | ||||||||| || ||||||||||||||| |||||||||| ||||||||||| |||| |
|
|
| T |
19906326 |
cgccgcctccaggataaaacaagctcaactacaactgtttgat-aactactgcgctttagaaaaccgttcgaaaattacacctccaatatggtaccaaga |
19906424 |
T |
 |
| Q |
261 |
ccactcttttaatactgaaaccactccaatatggta |
296 |
Q |
| |
|
||| |||||||||||| ||||||||| ||||||||| |
|
|
| T |
19906425 |
ccattcttttaatacttaaaccactctaatatggta |
19906460 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #27
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 65 - 308
Target Start/End: Original strand, 47574600 - 47574837
Alignment:
| Q |
65 |
tatctatcgaagttgttactagattgagtcaagaccaggtcgtcctctttaatacgtttcgtgacactg----aaattgtataaggccgactatcaacca |
160 |
Q |
| |
|
|||||| |||| |||||| ||| |||||||| | ||||||| |||||||| ||||||| ||||||| ||||||| ||| | | |||||| || |
|
|
| T |
47574600 |
tatctaccgaatttgttattaggttgagtcacaatcaggtcgctctctttaagacgtttcttgacactacccaaaattgtgcaagacaaaatatcaatca |
47574699 |
T |
 |
| Q |
161 |
cgccgcctccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccttcaatatggtactaaga |
260 |
Q |
| |
|
|||||| ||||||||||||||||| |||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||| ||||||||| |
|
|
| T |
47574700 |
cgccgcatccaggataaaacaagtccagctacaactgtgcggttaactactgccatgtagaaaactgttcgagaattacaccttca-----gtactaaga |
47574794 |
T |
 |
| Q |
261 |
ccactcttttaatactgaaaccactccaatatggtactaagaccactc |
308 |
Q |
| |
|
| |||||||||||||||||| |||||||||||||| |||||||| |
|
|
| T |
47574795 |
caactcttttaatactgaaa-----ccaatatggtactatgaccactc |
47574837 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #28
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 23 - 299
Target Start/End: Original strand, 4550932 - 4551206
Alignment:
| Q |
23 |
attgttgtattttggtttttcaaattctattttaaaagagaatatctatcgaagttgttactagattgagtcaagaccaggtcgtcctctttaatacgtt |
122 |
Q |
| |
|
|||||||||||| || ||||||||||||||||| ||| |||||||||||||||||||||||| |||||||| || ||||||| | ||||| || || |
|
|
| T |
4550932 |
attgttgtattt-ggattttcaaattctattttgaaaagtaatatctatcgaagttgttactaggttgagtcatgattaggtcgttca-tttaagacatt |
4551029 |
T |
 |
| Q |
123 |
tcgtgacactg----aaattgtataaggccgactatcaaccacgccgcctccaggataaaacaagttcagctacaactgtgcggttaactactgcactgt |
218 |
Q |
| |
|
| || ||||| || |||| ||| | |||||||||| ||||||||||||||||||||||| ||| ||||||| |||| |||||||||||||||| |
|
|
| T |
4551030 |
ttatgccactgctcaaagttgtgcaagacagactatcaactacgccgcctccaggataaaacaaactcaattacaactctgcgattaactactgcactgt |
4551129 |
T |
 |
| Q |
219 |
agaaaaccgttcgagaattacaccttc-aatatggtactaagaccactcttttaatactgaaaccactccaatatggtacta |
299 |
Q |
| |
|
||||||||||| ||| ||||||| || |||||||||||||||||| ||| |||||||||||||| |||||||||||| |
|
|
| T |
4551130 |
agaaaaccgtttaagatttacaccatcaaatatggtactaagaccattct-----tactgaaaccactctaatatggtacta |
4551206 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #29
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 70 - 247
Target Start/End: Complemental strand, 42758870 - 42758689
Alignment:
| Q |
70 |
atcgaagttgttactagattgagtcaagaccaggtcgtcctctttaatacgtttcgtgacactg----aaattgtataaggccgactatcaaccacgccg |
165 |
Q |
| |
|
||||||||||||||||| |||||||| |||||||||| |||||||| | |||||||| ||||| ||||||| ||| | |||||||||||||| || |
|
|
| T |
42758870 |
atcgaagttgttactaggttgagtcacgaccaggtcgctctctttaagatgtttcgtggcactgcccaaaattgtgcaagacagactatcaaccacgtcg |
42758771 |
T |
 |
| Q |
166 |
cctccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccttcaa |
247 |
Q |
| |
|
||||||| ||||||| ||| || ||||||||||| |||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
42758770 |
cctccagaataaaactagtccaaaaacaactgtgcgattaactactgcactgtagaaaaccgttcgagaattacaccctcaa |
42758689 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #30
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 65 - 265
Target Start/End: Original strand, 2819819 - 2820024
Alignment:
| Q |
65 |
tatctatcgaagttgttactagattgagtcaagaccaggtcgtcctctttaatacgtttcgtgacactg----aaattgtataaggccgactatcaacca |
160 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||||||| ||||||| | |||||||| |||| ||||||| |||| ||||||| |||| |
|
|
| T |
2819819 |
tatctatcgaagttgttactagattgagtcacgaccaggtcgttttctttaagatgtttcgtggtactgtccaaaattgtgcaaggtagactatctacca |
2819918 |
T |
 |
| Q |
161 |
cgccgcctccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccttc-aatatggtactaag |
259 |
Q |
| |
|
||||| |||||||||||||||||| |||||||||| ||| |||||| |||||| ||||||| ||||||||| ||||||| || |||||| |||||| |
|
|
| T |
2819919 |
tgccgcgtccaggataaaacaagtttagctacaactatgcaattaactgttgcactatagaaaatcgttcgagatttacaccctcaaatatgacactaag |
2820018 |
T |
 |
| Q |
260 |
accact |
265 |
Q |
| |
|
|||||| |
|
|
| T |
2820019 |
accact |
2820024 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #31
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 72 - 245
Target Start/End: Complemental strand, 32082203 - 32082027
Alignment:
| Q |
72 |
cgaagttgttactagattgagtcaagaccaggtcgtcctctttaatacgtttcgtgacactg----aaattgtataaggccgactatcaaccacgccgcc |
167 |
Q |
| |
|
||||||||||||||| |||||||| |||||| || || ||||| || |||| || ||||| ||||||| ||||| |||||||||||||||||| |
|
|
| T |
32082203 |
cgaagttgttactaggttgagtcacgaccagatcactctttttaagacatttcatggcactgtccaaaattgtgcaaggca-actatcaaccacgccgcc |
32082105 |
T |
 |
| Q |
168 |
tccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccttc |
245 |
Q |
| |
|
|||||||||||||||| |||| ||||| ||||||||||||||||||| ||||||||||| ||||||| |||||||||| |
|
|
| T |
32082104 |
tccaggataaaacaagctcagttacaattgtgcggttaactactgcagtgtagaaaaccattcgagatttacaccttc |
32082027 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #32
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 65 - 198
Target Start/End: Original strand, 31765861 - 31765998
Alignment:
| Q |
65 |
tatctatcgaagttgttactagattgagtcaagaccaggtcgtcctctttaatacgtttcgtgacactg----aaattgtataaggccgactatcaacca |
160 |
Q |
| |
|
|||||| ||||||||||||||| |||||||| |||||||| |||||||| |||||||||| ||||| ||||||| ||||| |||||||||||| |
|
|
| T |
31765861 |
tatctaccgaagttgttactaggttgagtcacaaccaggtcactctctttaagacgtttcgtggcactgcccaaaattgtgcaaggcagactatcaacca |
31765960 |
T |
 |
| Q |
161 |
cgccgcctccaggataaaacaagttcagctacaactgt |
198 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
31765961 |
cgccgcctccaggataaaacaagtccagctacaactgt |
31765998 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #33
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 65 - 296
Target Start/End: Original strand, 19106594 - 19106818
Alignment:
| Q |
65 |
tatctatcgaagttgttactagattgagtcaagaccaggtcgtcctctttaatacgtttcgtgacactg----aaattgtataaggccgactatcaacca |
160 |
Q |
| |
|
|||||| ||||||||||||||| |||||||| | ||| ||| ||||||| ||||||| | ||||| ||||||| ||||| |||||||||||| |
|
|
| T |
19106594 |
tatctaccgaagttgttactaggttgagtcacaagcagatcgctttctttaagacgtttcatagcactgcccaaaattgtgcaaggctgactatcaacca |
19106693 |
T |
 |
| Q |
161 |
cgccgcctccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccttc-aatatggtactaag |
259 |
Q |
| |
|
|| ||||||||| ||||||||| || ||||||||||||||||||||||||||||||||||||||||||||| || ||||||||| |||| |
|
|
| T |
19106694 |
cgtcgcctccagaataaaacaac-----------ctttgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggtattaag |
19106782 |
T |
 |
| Q |
260 |
accactcttttaatactgaaaccactccaatatggta |
296 |
Q |
| |
|
| ||||| |||||||| ||||||| | ||||||||| |
|
|
| T |
19106783 |
atcactc-tttaatacagaaaccattttaatatggta |
19106818 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #34
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 225 - 283
Target Start/End: Complemental strand, 55810234 - 55810176
Alignment:
| Q |
225 |
ccgttcgagaattacaccttcaatatggtactaagaccactcttttaatactgaaacca |
283 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
55810234 |
ccgttcgagaattacacgttcaatatggtactaagaccactcttttaatactgaaacca |
55810176 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #35
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 149 - 283
Target Start/End: Original strand, 32545158 - 32545293
Alignment:
| Q |
149 |
gactatcaaccacgccgcctccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccttcaat |
248 |
Q |
| |
|
|||||||||||||| | |||| ||||||||||| ||| |||||| |||||| |||||||||||||||| || ||||||||||||||| || |||| |
|
|
| T |
32545158 |
gactatcaaccacgttgtatccatgataaaacaagctcaactacaattgtgcgactaactactgcactgtaattaatcgttcgagaattacaactccaat |
32545257 |
T |
 |
| Q |
249 |
atggtactaagaccactct-tttaatactgaaacca |
283 |
Q |
| |
|
||| ||||||||| |||| |||||||||||||||| |
|
|
| T |
32545258 |
atgttactaagactgctctatttaatactgaaacca |
32545293 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #36
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 149 - 242
Target Start/End: Original strand, 16948064 - 16948157
Alignment:
| Q |
149 |
gactatcaaccacgccgcctccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacacc |
242 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||||||| ||||||||||| ||||||||| |||||||| || | ||| ||||||||||| |
|
|
| T |
16948064 |
gactatcaactacgccgcctccaggataaaacaagttcattgacaactgtgcgattaactactacactgtagctaatcattctagaattacacc |
16948157 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #37
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 171 - 296
Target Start/End: Original strand, 40408284 - 40408411
Alignment:
| Q |
171 |
aggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcg--agaattacac-cttcaatatggtactaagaccactct |
267 |
Q |
| |
|
||||||||||||||||| |||||| |||| |||||| ||||| ||||||||||||||||| ||| ||||| ||| |||||||||||||||||||| | |
|
|
| T |
40408284 |
aggataaaacaagttcaactacaattgtgtggttaattactgtactgtagaaaaccgttctcaagatttacattcttaaatatggtactaagaccact-t |
40408382 |
T |
 |
| Q |
268 |
tttaatactgaaaccactccaatatggta |
296 |
Q |
| |
|
||||||| ||||| |||| ||||||||| |
|
|
| T |
40408383 |
tttaatattgaaatcactttaatatggta |
40408411 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #38
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 175 - 306
Target Start/End: Original strand, 40840417 - 40840548
Alignment:
| Q |
175 |
taaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccttcaatatg-gtactaagaccactcttttaat |
273 |
Q |
| |
|
|||||||| || | ||||||||||||| ||||| |||||||| |||||| |||||||||||||||||| ||||||| || ||| ||||||||||| |
|
|
| T |
40840417 |
taaaacaaatttaactacaactgtgcgattaaccactgcacta-agaaaatcgttcgagaattacacctccaatatgactattaatgtcactcttttaaa |
40840515 |
T |
 |
| Q |
274 |
actgaaaccactccaatatggtactaagaccac |
306 |
Q |
| |
|
|||||||||| || | |||||||||| |||||| |
|
|
| T |
40840516 |
actgaaaccaatcaattatggtactatgaccac |
40840548 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #39
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 9 - 95
Target Start/End: Original strand, 23093112 - 23093197
Alignment:
| Q |
9 |
ttttggaattctaaattgttgtattttggtttttcaaattctattttaaaagagaatatctatcgaagttgttactagattgagtca |
95 |
Q |
| |
|
||||||| ||| ||| |||||||||| || ||| ||||||||||||| ||| ||||||| ||||||||||||||||| |||||||| |
|
|
| T |
23093112 |
ttttggatttcaaaactgttgtattt-ggatttccaaattctattttgaaaaagaatatatatcgaagttgttactaagttgagtca |
23093197 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 245 - 308
Target Start/End: Original strand, 47574816 - 47574874
Alignment:
| Q |
245 |
caatatggtactaagaccactcttttaatactgaaaccactccaatatggtactaagaccactc |
308 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||| |||||||||||||| |||||||| |
|
|
| T |
47574816 |
caatatggtactatgaccactcttttaatactgaaa-----ccaatatggtactatgaccactc |
47574874 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 56 - 171
Target Start/End: Complemental strand, 13065897 - 13065778
Alignment:
| Q |
56 |
aaaagagaatatctatcgaagttgttactagattgagtcaagaccaggtcgtcctctttaatacgtttcgtgacactg----aaattgtataaggccgac |
151 |
Q |
| |
|
|||| |||||||||| ||||||||||||||| |||||||| ||| | |||| |||||||| ||||||| || ||||| || |||| |||| ||| |
|
|
| T |
13065897 |
aaaaaagaatatctaccgaagttgttactaggttgagtcacgactatgtcgctctctttaagacgtttcatggcactgcccaaagttgtgaaagggagac |
13065798 |
T |
 |
| Q |
152 |
tatcaaccacgccgcctcca |
171 |
Q |
| |
|
|||||||||||| ||||||| |
|
|
| T |
13065797 |
tatcaaccacgcagcctcca |
13065778 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 217 - 266
Target Start/End: Original strand, 55073389 - 55073438
Alignment:
| Q |
217 |
gtagaaaaccgttcgagaattacaccttcaatatggtactaagaccactc |
266 |
Q |
| |
|
||||||||||||||||||||||||| | |||||| ||| ||||||||||| |
|
|
| T |
55073389 |
gtagaaaaccgttcgagaattacacatccaatatagtattaagaccactc |
55073438 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 226 - 269
Target Start/End: Complemental strand, 1151254 - 1151211
Alignment:
| Q |
226 |
cgttcgagaattacaccttcaatatggtactaagaccactcttt |
269 |
Q |
| |
|
||||||||||||||||||||| ||||||||||| | |||||||| |
|
|
| T |
1151254 |
cgttcgagaattacaccttcagtatggtactaaaatcactcttt |
1151211 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 171 - 313
Target Start/End: Original strand, 9362416 - 9362562
Alignment:
| Q |
171 |
aggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacac-cttcaatatgg-tactaagaccactc-- |
266 |
Q |
| |
|
||||||||| |||| |||||| ||||||||| |||||||||||||| ||| |||| ||| ||| |||||| || ||||||| || ||||||||||| |
|
|
| T |
9362416 |
aggataaaataagtccagctaaaactgtgcgattaactactgcactatagctaaccattcaagacttacacatttaaatatggctattaagaccactcgg |
9362515 |
T |
 |
| Q |
267 |
ttttaatactgaaaccactccaatatggtactaagaccactcaaata |
313 |
Q |
| |
|
||||||| | || ||||| ||||||||| | |||||||| ||||| |
|
|
| T |
9362516 |
atttaatattataatcactctaatatggtattgagaccacttaaata |
9362562 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 211 - 250
Target Start/End: Original strand, 55073320 - 55073359
Alignment:
| Q |
211 |
tgcactgtagaaaaccgttcgagaattacaccttcaatat |
250 |
Q |
| |
|
||||||||||||||||||||||||||||||| | |||||| |
|
|
| T |
55073320 |
tgcactgtagaaaaccgttcgagaattacacatccaatat |
55073359 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 134 - 188
Target Start/End: Original strand, 16953133 - 16953187
Alignment:
| Q |
134 |
aaattgtataaggccgactatcaaccacgccgcctccaggataaaacaagttcag |
188 |
Q |
| |
|
||||||| ||||| ||||||||||||| |||||||||||||||||||| |||| |
|
|
| T |
16953133 |
aaattgtgcaaggcagactatcaaccacaacgcctccaggataaaacaagctcag |
16953187 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 246 - 283
Target Start/End: Complemental strand, 7903041 - 7903005
Alignment:
| Q |
246 |
aatatggtactaagaccactcttttaatactgaaacca |
283 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
7903041 |
aatatggtactaagaccactc-tttaatactgaaacca |
7903005 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 221 - 285
Target Start/End: Complemental strand, 13065776 - 13065712
Alignment:
| Q |
221 |
aaaaccgttcgagaattacaccttcaa-tatggtactaagaccactcttttaatactgaaaccact |
285 |
Q |
| |
|
|||||| ||||||| ||||||| |||| ||||||||||| ||||||| |||||||| ||||||||| |
|
|
| T |
13065776 |
aaaaccattcgagatttacaccctcaaatatggtactaaaaccactc-tttaataccgaaaccact |
13065712 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 308
Target Start/End: Complemental strand, 29985715 - 29985570
Alignment:
| Q |
164 |
cgcctccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccttcaatatggtactaagacca |
263 |
Q |
| |
|
||||||||||||||| ||||| ||||||||| | || | |||||||||||| ||||| || ||||| ||||||||| || |||| ||||| |||||| |
|
|
| T |
29985715 |
cgcctccaggataaa-caagtccagctacaagtttgtgattaactactgcattgtagccaa-cgttcaagaattacaactctaatacggtacatagacca |
29985618 |
T |
 |
| Q |
264 |
ctct---tttaatactgaaaccactccaatatggtactaagaccactc |
308 |
Q |
| |
|
|||| ||||||| |||||||| || | | |||||||| || ||||| |
|
|
| T |
29985617 |
ctcttaatttaatattgaaaccaatcaattttggtactatgatcactc |
29985570 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 218 - 313
Target Start/End: Complemental strand, 39217356 - 39217257
Alignment:
| Q |
218 |
tagaaaaccgttcgagaattacaccttcaat-atgg-tactaagaccactct--tttaatactgaaaccactccaatatggtactaagaccactcaaata |
313 |
Q |
| |
|
||||||| ||||||||| ||||||| |||| |||| || ||||||||||| |||||||||||||||||| |||||||| | |||||||||||||| |
|
|
| T |
39217356 |
tagaaaatcgttcgagacttacaccctcaaacatggctattaagaccactcgaatttaatactgaaaccactgttatatggtattgagaccactcaaata |
39217257 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 231 - 263
Target Start/End: Original strand, 55149765 - 55149797
Alignment:
| Q |
231 |
gagaattacaccttcaatatggtactaagacca |
263 |
Q |
| |
|
|||||||||||||||||||||||||| |||||| |
|
|
| T |
55149765 |
gagaattacaccttcaatatggtactgagacca |
55149797 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 133; Significance: 4e-69; HSPs: 29)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 65 - 298
Target Start/End: Complemental strand, 23192937 - 23192701
Alignment:
| Q |
65 |
tatctatcgaagttgttactagattgagtcaagaccaggtcgtcctctttaatacgtttcgtgacactg----aaattgtataaggccgactatcaacca |
160 |
Q |
| |
|
|||||| ||||||||||||||| |||||||| |||||||||| |||||||| |||||||||| ||||| |||||||| ||||| |||||||||||| |
|
|
| T |
23192937 |
tatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattgtacaaggcagactatcaacca |
23192838 |
T |
 |
| Q |
161 |
cgccgcctccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccttcaatatggtactaaga |
260 |
Q |
| |
|
|||| |||||||||||||||||| ||||||||| ||| || ||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||| |
|
|
| T |
23192837 |
cgcctcctccaggataaaacaagc-cagctacaattgttcgattaactactgcactgtagaaaaccgttcgagaattacacctccaatatggtaccaaga |
23192739 |
T |
 |
| Q |
261 |
ccactcttttaatactgaaaccactccaatatggtact |
298 |
Q |
| |
|
||| ||||||||||||||||||||| |||||| |||| |
|
|
| T |
23192738 |
ccattcttttaatactgaaaccactttaatatgatact |
23192701 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 65 - 285
Target Start/End: Complemental strand, 33301300 - 33301076
Alignment:
| Q |
65 |
tatctatcgaagttgttactagattgagtcaagaccaggtcgtcctctttaatacgtttcgtgacactg----aaattgtataaggccgactatcaacca |
160 |
Q |
| |
|
|||||||| ||||||||||||| |||| ||| ||||||||||| |||||||| |||||||||| ||||| ||||||| ||| | |||||||||||| |
|
|
| T |
33301300 |
tatctatcaaagttgttactagcttgaatcacgaccaggtcgttctctttaagacgtttcgtggcactgcccaaaattgtgcaagacagactatcaacca |
33301201 |
T |
 |
| Q |
161 |
cgccgcctccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccttc-aatatggtactaag |
259 |
Q |
| |
|
|||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||| |
|
|
| T |
33301200 |
cgccgcctccaggataaaacaatttcatctacaactgtgcggttaactactgcactgtagaaaactgttcgagaattacaccttcaaatatggtactaag |
33301101 |
T |
 |
| Q |
260 |
accactcttttaatactgaaaccact |
285 |
Q |
| |
|
||||||| |||||||| |||||||| |
|
|
| T |
33301100 |
accactc-gttaatacttaaaccact |
33301076 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 65 - 296
Target Start/End: Complemental strand, 19799133 - 19798898
Alignment:
| Q |
65 |
tatctatcgaagttgttactagattgagtcaagaccaggtcgtcctctttaatacgtttcgtgacactg----aaattgtataaggccgactatcaacca |
160 |
Q |
| |
|
|||||||||||||||||||||| |||||||| || ||| ||| |||||||| |||||||||| |||| ||||||| ||| | |||||||||||| |
|
|
| T |
19799133 |
tatctatcgaagttgttactaggttgagtcacgatcagatcgctctctttaagacgtttcgtggcactatccaaaattgtgcaagacagactatcaacca |
19799034 |
T |
 |
| Q |
161 |
cgccgcctccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccttc-aatatggtactaag |
259 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| |||||| |
|
|
| T |
19799033 |
cgccgcctccaggataaaacaagcccagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagatttacaccttcaaatatggcactaag |
19798934 |
T |
 |
| Q |
260 |
accactcttttaatactgaaaccactccaatatggta |
296 |
Q |
| |
|
||||||| ||||||||| |||||||| ||||||||| |
|
|
| T |
19798933 |
accactc-tttaatactaaaaccactttaatatggta |
19798898 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 67 - 281
Target Start/End: Complemental strand, 18784666 - 18784457
Alignment:
| Q |
67 |
tctatcgaagttgttactagattgagtcaagaccaggtcgtcctctttaatacgtttcgtgacactg----aaattgtataaggccgactatcaaccacg |
162 |
Q |
| |
|
|||| ||||||||||||||| |||||||| || ||||||| || ||||| || ||||||| ||||| ||||||| ||||| |||||||||||||| |
|
|
| T |
18784666 |
tctagcgaagttgttactaggttgagtcacgatcaggtcgctct-tttaagacatttcgtggcactgcctaaaattgtgcaaggcagactatcaaccacg |
18784568 |
T |
 |
| Q |
163 |
ccgcctccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccttcaatatggtactaagacc |
262 |
Q |
| |
|
|||||||||| ||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
18784567 |
ccgcctccagaataaaacaagtccagct--------gcggttaactactgcactgtagaaaaccgttcgagaattacaccttcaatatggtactaagacc |
18784476 |
T |
 |
| Q |
263 |
actcttttaatactgaaac |
281 |
Q |
| |
|
||||||||||||||||||| |
|
|
| T |
18784475 |
actcttttaatactgaaac |
18784457 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 65 - 284
Target Start/End: Complemental strand, 16649732 - 16649510
Alignment:
| Q |
65 |
tatctatcgaagttgttactagattgagtcaagaccaggtcgtcctctttaatacgtttcgtgacactg----aaattgtataaggccgactatcaacca |
160 |
Q |
| |
|
|||||| |||||||||||||| |||||||| |||||||||| |||||||| |||||| ||| ||||| ||||||| ||| |||||||||||| |
|
|
| T |
16649732 |
tatctaccgaagttgttactaagttgagtcacgaccaggtcgctctctttaagacgttt-gtggcactgtccaaaattgtgcaagatagactatcaacca |
16649634 |
T |
 |
| Q |
161 |
cgccgcctccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccttc-aatatggtactaag |
259 |
Q |
| |
|
|||||||||| ||||||||||||| |||||||||||||| ||||||||||||||||||||||||| |||||||||||||||| || ||||||||||||| |
|
|
| T |
16649633 |
cgccgcctccgggataaaacaagtccagctacaactgtgtggttaactactgcactgtagaaaactgttcgagaattacaccctcaaatatggtactaat |
16649534 |
T |
 |
| Q |
260 |
accactcttttaatactgaaaccac |
284 |
Q |
| |
|
||||||| ||||||||||||||||| |
|
|
| T |
16649533 |
accactc-tttaatactgaaaccac |
16649510 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 148 - 284
Target Start/End: Original strand, 25843818 - 25843954
Alignment:
| Q |
148 |
cgactatcaaccacgccgcctccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccttca- |
246 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
25843818 |
cgactatcaaccacgccgcctccagtataaaacaagcccagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcat |
25843917 |
T |
 |
| Q |
247 |
atatggtactaagaccactcttttaatactgaaaccac |
284 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
25843918 |
atatggtactaagaccactc-tttaatactgaaaccac |
25843954 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 65 - 296
Target Start/End: Complemental strand, 26927842 - 26927607
Alignment:
| Q |
65 |
tatctatcgaagttgttactagattgagtcaagaccaggtcgtcctctttaatacgtttcgtgacactg----aaattgtataaggccgactatcaacca |
160 |
Q |
| |
|
|||||| ||||||||||||||| |||||||| ||| | |||| |||||||| |||||||||| || || ||||||| ||||| |||||||||||| |
|
|
| T |
26927842 |
tatctaccgaagttgttactaggttgagtcacgactaagtcgctctctttaagacgtttcgtggcattgcccaaaattgtgcaaggcagactatcaacca |
26927743 |
T |
 |
| Q |
161 |
cgccgcctccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccttc-aatatggtactaag |
259 |
Q |
| |
|
||||||||| | |||||||||| ||||||||||||| | |||||||||||||||||||||| |||||||||||||||||| | |||||||||||||| |
|
|
| T |
26927742 |
cgccgcctctaaaataaaacaagcccagctacaactgtacacttaactactgcactgtagaaaatcgttcgagaattacacctccaaatatggtactaag |
26927643 |
T |
 |
| Q |
260 |
accactcttttaatactgaaaccactccaatatggta |
296 |
Q |
| |
|
||||||| |||||||||||||||||| ||||||||| |
|
|
| T |
26927642 |
accactc-tttaatactgaaaccactttaatatggta |
26927607 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 65 - 285
Target Start/End: Original strand, 40165955 - 40166179
Alignment:
| Q |
65 |
tatctatcgaagttgttactagattgagtcaagaccaggtcgtcctctttaatacgtttcgtgacactg----aaattgtataaggccgactatcaacca |
160 |
Q |
| |
|
|||||| ||||||||||||||| |||||||| ||||| |||| |||||||| |||||||||| ||||| ||||||| ||||| ||||| |||| | |
|
|
| T |
40165955 |
tatctaccgaagttgttactaggttgagtcacgaccatgtcgctctctttaagacgtttcgtggcactgcccaaaattgtgcaaggcagactaacaacaa |
40166054 |
T |
 |
| Q |
161 |
cgccgcctccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccttc-aatatggtactaag |
259 |
Q |
| |
|
||||||||| ||||||||||||| || |||||||| | || |||||||||||||||||||||||||||||| | |||||| ||| |||||||||||||| |
|
|
| T |
40166055 |
cgccgcctctaggataaaacaagcacaactacaactatacgattaactactgcactgtagaaaaccgttcgaaatttacacattcgaatatggtactaag |
40166154 |
T |
 |
| Q |
260 |
accactcttttaatactgaaaccact |
285 |
Q |
| |
|
||||||| |||||||||||||||||| |
|
|
| T |
40166155 |
accactc-tttaatactgaaaccact |
40166179 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 5 - 263
Target Start/End: Original strand, 16035530 - 16035784
Alignment:
| Q |
5 |
ttgtttttggaattctaaattgttgtattttggtttttcaaattctattttaaaagagaatatctatcgaagttgttactagattgagtcaagaccaggt |
104 |
Q |
| |
|
||||||||||| ||| ||| |||||||||| || ||||||||||||| || ||||||||| | ||||||||||||| |||||||| |||||||| |
|
|
| T |
16035530 |
ttgtttttggatttccaaactgttgtattt-ggattttcaaattcta------aaatgaatatctaccaaagttgttactaggttgagtcacgaccaggt |
16035622 |
T |
 |
| Q |
105 |
cgtcctctttaatacgtttcgtgacactg----aaattgtataaggccgactatcaaccacgccgcctccaggataaaacaagttcagctacaactgtgc |
200 |
Q |
| |
|
|| ||||||||| |||||||||| ||||| || |||| ||| | || |||||||||||||||||||||||||||||||| ||| |||||| |||| |
|
|
| T |
16035623 |
cgccctctttaacacgtttcgtggcactgtccaaagttgtgcaagacagattatcaaccacgccgcctccaggataaaacaagctcatctacaaatgtgt |
16035722 |
T |
 |
| Q |
201 |
ggttaactactgcactgtagaaaaccgttcgagaattacaccttcaatatggtactaagacca |
263 |
Q |
| |
|
|||||||||||||||| ||||||||| |||||| ||||||||| ||||||||||| ||||||| |
|
|
| T |
16035723 |
ggttaactactgcactttagaaaaccattcgag-attacacctccaatatggtaccaagacca |
16035784 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 65 - 266
Target Start/End: Original strand, 10135431 - 10135637
Alignment:
| Q |
65 |
tatctatcgaagttgttactagattgagtcaagaccaggtcgtcctctttaatacgtttcgtgacactg----aaattgtataaggccgactatcaacca |
160 |
Q |
| |
|
|||||| ||||||||||||||| |||||||| |||||||||| |||||||| |||||||||| |||| ||||||| ||||| ||| |||||||| |
|
|
| T |
10135431 |
tatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactacctaaaattgtgcaaggcagacaatcaacca |
10135530 |
T |
 |
| Q |
161 |
cgccgcctccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccttc-aatatggtactaag |
259 |
Q |
| |
|
||||||||| ||||||||||||| ||| | ||||||||||||||||||||||||||||||||||||||| ||||||||||| || ||||||| |||| | |
|
|
| T |
10135531 |
cgccgcctctaggataaaacaagcccagttgcaactgtgcggttaactactgcactgtagaaaaccgttcaagaattacaccctcaaatatggcactacg |
10135630 |
T |
 |
| Q |
260 |
accactc |
266 |
Q |
| |
|
||||||| |
|
|
| T |
10135631 |
accactc |
10135637 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 143 - 298
Target Start/End: Original strand, 8137996 - 8138151
Alignment:
| Q |
143 |
aaggccgactatcaaccacgccgcctccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacacc |
242 |
Q |
| |
|
||||| |||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
8137996 |
aaggcagactatcaaccatatcgcctccaggataaaacaagctcagctacaactgtgcggttaactactgcaatgtagaaaaccgttcgagaattacacc |
8138095 |
T |
 |
| Q |
243 |
ttc-aatatggtactaagaccactcttttaatactgaaaccactccaatatggtact |
298 |
Q |
| |
|
|| ||||||||||||||||||| | |||||||||||||||||| |||||| |||| |
|
|
| T |
8138096 |
ctcaaatatggtactaagaccac-cctttaatactgaaaccactttaatatgatact |
8138151 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #12
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 65 - 294
Target Start/End: Complemental strand, 51041581 - 51041350
Alignment:
| Q |
65 |
tatctatcgaagttgttactagattgagtcaagaccaggtcgtcctctttaatacgtttcgtgacactg---aaattgtataaggccgactatcaaccac |
161 |
Q |
| |
|
|||||| |||||||||||||| |||||||| |||||||||| || ||||| |||||||||| ||||| ||||||| ||||| ||||||||||||| |
|
|
| T |
51041581 |
tatctaccgaagttgttactaagttgagtcacgaccaggtcgctct-tttaagacgtttcgtggcactgcccaaattgtgcaaggcagactatcaaccac |
51041483 |
T |
 |
| Q |
162 |
gccgcctccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccttc-aatatggtactaaga |
260 |
Q |
| |
|
|||||||||| ||||||||||| ||||||||||||| || |||| ||||||||||||||||| |||||||||| || |||| | ||||||||||||||| |
|
|
| T |
51041482 |
gccgcctccaagataaaacaagcccagctacaactgttcgattaattactgcactgtagaaaatcgttcgagaactatacctccaaatatggtactaaga |
51041383 |
T |
 |
| Q |
261 |
ccactcttttaatactgaaaccactccaatatgg |
294 |
Q |
| |
|
||||| ||||||| |||||||||| ||||||| |
|
|
| T |
51041382 |
tcactc-tttaatattgaaaccactttaatatgg |
51041350 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #13
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 65 - 284
Target Start/End: Original strand, 10140064 - 10140294
Alignment:
| Q |
65 |
tatctatcgaagttgttactagattgagtcaagaccaggtcgtcctctttaatacgtttcgtgacactg----aaattgtataaggccgactatcaacca |
160 |
Q |
| |
|
|||||| ||||||||||||||| |||||||| || ||||||| |||||||| |||||||||| |||| ||||||| ||||| ||| |||||||| |
|
|
| T |
10140064 |
tatctaccgaagttgttactaggttgagtcacgatcaggtcgctctctttaacacgtttcgtggcactactcaaaattgtgcaaggcagacaatcaacca |
10140163 |
T |
 |
| Q |
161 |
cgccgcctccaggataaaacaagttcagctacaactgtgcggttaactactgcactgta-------gaaaaccgttcgagaattacaccttc-aatatgg |
252 |
Q |
| |
|
|||| |||| ||||||||||||| ||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||| || ||||||| |
|
|
| T |
10140164 |
cgccacctctaggataaaacaagcccagctgcaactgtgcggttaactactgcactgtagaaaaccgaaaaccgttcgagaattacaccctcaaatatgg |
10140263 |
T |
 |
| Q |
253 |
tactaagaccactcttttaatactgaaaccac |
284 |
Q |
| |
|
||||||||||| || ||||||| ||||||||| |
|
|
| T |
10140264 |
tactaagaccattc-tttaatattgaaaccac |
10140294 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #14
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 150 - 296
Target Start/End: Original strand, 16833548 - 16833694
Alignment:
| Q |
150 |
actatcaaccacgccgcctccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccttcaata |
249 |
Q |
| |
|
|||||||||| |||| | |||||||||||||| |||||||||||||| || |||||||||||| ||||||||||||||||| |||||||||| ||||| |
|
|
| T |
16833548 |
actatcaacctcgccacatccaggataaaacagcctcagctacaactgttcgattaactactgcattgtagaaaaccgttcgaaaattacacctccaata |
16833647 |
T |
 |
| Q |
250 |
tggtactaagaccactcttttaatactgaaaccactccaatatggta |
296 |
Q |
| |
|
|||||| ||||||| ||||||||||||||||||||| ||||||||| |
|
|
| T |
16833648 |
tggtaccaagaccattcttttaatactgaaaccactttaatatggta |
16833694 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #15
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 149 - 298
Target Start/End: Complemental strand, 28434606 - 28434457
Alignment:
| Q |
149 |
gactatcaaccacgccgcctccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccttcaat |
248 |
Q |
| |
|
||||||||||| |||| ||||||||||||||||||||| |||||| ||||| |||||||||| ||| ||||||||||||||||| |||||||| |||| |
|
|
| T |
28434606 |
gactatcaaccttgccgtctccaggataaaacaagttcaactacaattgtgcagttaactactttactatagaaaaccgttcgagatttacacctccaat |
28434507 |
T |
 |
| Q |
249 |
atggtactaagaccactcttttaatactgaaaccactccaatatggtact |
298 |
Q |
| |
|
||||||| |||| || ||||||||||||||||||||| ||||||||||| |
|
|
| T |
28434506 |
atggtacaaagatcattcttttaatactgaaaccactttaatatggtact |
28434457 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #16
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 80 - 296
Target Start/End: Complemental strand, 47451330 - 47451111
Alignment:
| Q |
80 |
ttactagattgagtcaagaccaggtcgtcctctttaatacgtttcgtgacactg----aaattgtataaggccgactatcaaccacgccgcctccaggat |
175 |
Q |
| |
|
||||||| |||||||| |||||||||| |||||||| ||||||| || ||||| ||||||| ||| | ||||||||||||||||||||||| ||| |
|
|
| T |
47451330 |
ttactaggttgagtcacgaccaggtcgctctctttaagacgtttcatggcactgccaaaaattgtgcaagacagactatcaaccacgccgcctccaagat |
47451231 |
T |
 |
| Q |
176 |
aaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccttc-aatatggtactaagaccactcttttaata |
274 |
Q |
| |
|
|||||||| ||| |||||||||| || |||||||||| |||| ||||||||||||||||||||||||| | ||||||||||||| | | |||||||| |
|
|
| T |
47451230 |
aaaacaagctcaactacaactgttcgattaactactgtactgcagaaaaccgttcgagaattacacctccaaatatggtactaattc--tttttttaata |
47451133 |
T |
 |
| Q |
275 |
ctgaaaccactccaatatggta |
296 |
Q |
| |
|
||||||||||| ||||||||| |
|
|
| T |
47451132 |
ctgaaaccactttaatatggta |
47451111 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #17
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 186 - 283
Target Start/End: Original strand, 3094188 - 3094285
Alignment:
| Q |
186 |
cagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccttcaatatggtactaagaccactcttttaatactgaaacca |
283 |
Q |
| |
|
||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||| |
|
|
| T |
3094188 |
cagctacaactgttcgattaactactgcactgtagaaaaccgttcgagaattacaccttcaatatggtattaagaccaatcttttaatactgaaacca |
3094285 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #18
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 72 - 296
Target Start/End: Complemental strand, 39588480 - 39588252
Alignment:
| Q |
72 |
cgaagttgttactagattgagtcaagaccaggtcgtcctctttaatacgtttcgtgacactg----aaattgtataaggccgactatcaaccacgccgcc |
167 |
Q |
| |
|
|||| |||||||||| || ||||| || ||||||| |||||||| |||||||||| ||||| ||||||| ||| | ||||||| |||||||| | |
|
|
| T |
39588480 |
cgaaattgttactaggttaagtcacgatcaggtcgctctctttaagacgtttcgtggcactgtccaaaattgtgcaagacagactatctaccacgcctac |
39588381 |
T |
 |
| Q |
168 |
tccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccttc-aatatggtactaagaccactc |
266 |
Q |
| |
|
||||||||||| |||| ||| |||||| ||| || |||||||||||| |||||||||||||||||||||||||||| | ||||||||||| |||||| || |
|
|
| T |
39588380 |
tccaggataaagcaagctcatctacaattgttcgattaactactgcagtgtagaaaaccgttcgagaattacacctccaaatatggtactgagaccaatc |
39588281 |
T |
 |
| Q |
267 |
ttttaatactgaaaccactccaatatggta |
296 |
Q |
| |
|
||||||||| |||||||| ||||||||| |
|
|
| T |
39588280 |
-tttaatactaaaaccactttaatatggta |
39588252 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #19
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 134 - 296
Target Start/End: Original strand, 38620740 - 38620902
Alignment:
| Q |
134 |
aaattgtataaggccgactatcaaccacgccgcctccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgag |
233 |
Q |
| |
|
||||||| ||||| |||||||||| |||||||||||| |||||||||||| || |||||||||||||||||||||||||| |||||||||| ||| ||| |
|
|
| T |
38620740 |
aaattgtgcaaggcagactatcaactacgccgcctccaagataaaacaagtccaactacaactgtgcggttaactactgcattgtagaaaactgtttgag |
38620839 |
T |
 |
| Q |
234 |
aattaca-ccttcaatatggtactaagaccactcttttaatactgaaaccactccaatatggta |
296 |
Q |
| |
|
| ||||| ||| ||||||||| ||||||||||| ||||||||||||| |||| ||||||||| |
|
|
| T |
38620840 |
atttacaccctaaaatatggtattaagaccactc-tttaatactgaaatcactttaatatggta |
38620902 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #20
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 63 - 269
Target Start/End: Original strand, 11806332 - 11806543
Alignment:
| Q |
63 |
aatatctatcgaagttgttactagattgagtcaagaccaggtcgtcctctttaatacgtttcgtgacactg----aaattgtataaggccgactatcaac |
158 |
Q |
| |
|
|||||||||||||||||||| ||| |||||||| ||||| ||| |||||||| | |||||||||||||| || | ||| ||||| |||||||||| |
|
|
| T |
11806332 |
aatatctatcgaagttgttattaggttgagtcacaaccagatcgctctctttaagatgtttcgtgacactgcgcaaagtggtacaaggcagactatcaac |
11806431 |
T |
 |
| Q |
159 |
cacgccgcctccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccttc-aatatggtacta |
257 |
Q |
| |
|
|||||||||| ||| |||||| ||||||| |||||| ||||||||||| ||||||| || |||||| |||| |||| |||||| ||| ||||||| |||| |
|
|
| T |
11806432 |
cacgccgccttcagaataaaagaagttcaactacaattgtgcggttaaatactgcagtgcagaaaatcgtttgagatttacactttcaaatatggcacta |
11806531 |
T |
 |
| Q |
258 |
agaccactcttt |
269 |
Q |
| |
|
||| |||||||| |
|
|
| T |
11806532 |
agatcactcttt |
11806543 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #21
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 40 - 281
Target Start/End: Original strand, 12259946 - 12260184
Alignment:
| Q |
40 |
tttcaaattctattttaaaagagaatatctatcgaagttgttactagattgagtcaagaccaggtcgtcctctttaatacgtttcgtgacactg----aa |
135 |
Q |
| |
|
|||| ||||||||||| ||| | |||||||| |||||||||||| | ||||| || ||||| |||| |||||||| |||||||||||||||| || |
|
|
| T |
12259946 |
tttccaattctattttgaaaaataatatctactgaagttgttacttggttgagacacgaccatgtcgctctctttaagacgtttcgtgacactgcccaaa |
12260045 |
T |
 |
| Q |
136 |
attgtataaggccgactatcaaccacgccgcctccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaa |
235 |
Q |
| |
|
||||| ||| | ||||||||||||||||| || |||||||||||| || ||||||| ||||||||||||||||| |||||||| || || || |
|
|
| T |
12260046 |
attgtgcaagacagactatcaaccacgccgtctttaggataaaacaaacacatgtacaactatgcggttaactactgcataatagaaaacaatttgaaaa |
12260145 |
T |
 |
| Q |
236 |
ttacaccttcaatatggtactaagaccactcttttaatactgaaac |
281 |
Q |
| |
|
|||||||| ||| |||||||||||||| ||||||||||||| |
|
|
| T |
12260146 |
ttacacctccaa-----tactaagaccactc--ttaatactgaaac |
12260184 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #22
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 72 - 214
Target Start/End: Complemental strand, 47455499 - 47455353
Alignment:
| Q |
72 |
cgaagttgttactagattgagtcaagaccaggtcgtcctctttaatacgtttcgtgacactg----aaattgtataaggccgactatcaaccacgccgcc |
167 |
Q |
| |
|
||||||||||| ||| |||||||| |||||||||| |||||||| |||||||||| || || ||||||| ||| | || |||||||||||||||| |
|
|
| T |
47455499 |
cgaagttgttattaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgtccaaaattgtgcaagacagattatcaaccacgccgcc |
47455400 |
T |
 |
| Q |
168 |
tccaggataaaacaagttcagctacaactgtgcggttaactactgca |
214 |
Q |
| |
|
|||||||||||||||| |||||||||||| || |||||||||||| |
|
|
| T |
47455399 |
tccaggataaaacaagcctagctacaactgttcgattaactactgca |
47455353 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #23
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 39 - 223
Target Start/End: Original strand, 5346615 - 5346800
Alignment:
| Q |
39 |
ttttcaaattctattttaaaagagaatatctatcgaagttg-ttactagattgagtcaagaccaggtcgtcctctttaatacgtttcgtgacactg---- |
133 |
Q |
| |
|
|||||||||| ||||||||||||||||||| ||||||| ||||||| |||||| | | |||||||| |||||||| |||||| ||| ||||| |
|
|
| T |
5346615 |
ttttcaaattttattttaaaagagaatatc----gaagttggttactaggttgagttacaatcaggtcgttctctttaaaacgttttgtggcactgtcca |
5346710 |
T |
 |
| Q |
134 |
aaattgtataaggccgactatcaaccacgccgcctccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaa |
223 |
Q |
| |
|
|| ||||| || | ||||||||| ||||||||||||| ||| |||||||||||||||||||| ||| |||| |||| || |||||||| |
|
|
| T |
5346711 |
aatttgtacaatacagactatcaatcacgccgcctccaagatgaaacaagttcagctacaactatgcaattaaatactacaatgtagaaa |
5346800 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 61 - 191
Target Start/End: Original strand, 8900225 - 8900359
Alignment:
| Q |
61 |
agaatatctatcgaagttgttactagattgagtcaagaccaggtcgtcctctttaatacgtttcgtgacactg----aaattgtataaggccgactatca |
156 |
Q |
| |
|
|||||||||| ||||||||||||||| |||||||| ||||| ||| |||||||| |||||| ||||||||| || |||| || | ||||||| |
|
|
| T |
8900225 |
agaatatctaccgaagttgttactaggttgagtcacgaccatatcgctctctttaaaacgttttgtgacactgtctaaagttgtgcaaaacatactatca |
8900324 |
T |
 |
| Q |
157 |
accacgccgcctccaggataaaacaagttcagcta |
191 |
Q |
| |
|
| ||| ||||||||||||||||||||||||||||| |
|
|
| T |
8900325 |
atcacaccgcctccaggataaaacaagttcagcta |
8900359 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 65 - 133
Target Start/End: Original strand, 25855146 - 25855214
Alignment:
| Q |
65 |
tatctatcgaagttgttactagattgagtcaagaccaggtcgtcctctttaatacgtttcgtgacactg |
133 |
Q |
| |
|
|||||| ||||||||||||||| |||||||| |||||||||| |||||||| |||||||||| ||||| |
|
|
| T |
25855146 |
tatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactg |
25855214 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 212 - 295
Target Start/End: Original strand, 46696734 - 46696817
Alignment:
| Q |
212 |
gcactgtagaaaaccgttcgagaattacaccttcaatatggtactaagaccactcttttaatactgaaaccactccaatatggt |
295 |
Q |
| |
|
|||| |||||||||||||| |||||||||||| ||||||| || ||||| || |||||||||| ||||| || || |||||||| |
|
|
| T |
46696734 |
gcaccgtagaaaaccgttcaagaattacacctccaatatgttaataagatcattcttttaatattgaaatcattctaatatggt |
46696817 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 65 - 159
Target Start/End: Original strand, 3094089 - 3094187
Alignment:
| Q |
65 |
tatctatcgaagttgttactagattgagtcaagaccaggtcgtcctctttaatacgtttcgtgacactg----aaattgtataaggccgactatcaacc |
159 |
Q |
| |
|
|||||| ||||||||||||||| |||||||| |||||||||| |||||||| ||||||| || ||||| ||||||| ||||| ||||||||||| |
|
|
| T |
3094089 |
tatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcatggcactgcccaaaattgtgcaaggcagactatcaacc |
3094187 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 74 - 133
Target Start/End: Original strand, 16832085 - 16832144
Alignment:
| Q |
74 |
aagttgttactagattgagtcaagaccaggtcgtcctctttaatacgtttcgtgacactg |
133 |
Q |
| |
|
|||||||||||| ||||||||| |||||||||| |||||||| ||||| |||||||||| |
|
|
| T |
16832085 |
aagttgttactatattgagtcacgaccaggtcgctctctttaagacgttccgtgacactg |
16832144 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 246 - 283
Target Start/End: Complemental strand, 41097887 - 41097851
Alignment:
| Q |
246 |
aatatggtactaagaccactcttttaatactgaaacca |
283 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
41097887 |
aatatggtactaagaccactc-tttaatactgaaacca |
41097851 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0352 (Bit Score: 132; Significance: 2e-68; HSPs: 1)
Name: scaffold0352
Description:
Target: scaffold0352; HSP #1
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 65 - 284
Target Start/End: Original strand, 7079 - 7302
Alignment:
| Q |
65 |
tatctatcgaagttgttactagattgagtcaagaccaggtcgtcctctttaatacgtttcgtgacactg----aaattgtataaggccgactatcaacca |
160 |
Q |
| |
|
|||||| ||||||||||||||| |||||||| |||||||||| |||||||| |||||||||| ||||| ||||||| ||||| |||||||||||| |
|
|
| T |
7079 |
tatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattgtgcaaggcagactatcaacca |
7178 |
T |
 |
| Q |
161 |
cgccgcctccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccttc-aatatggtactaag |
259 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| || || ||||| ||| |||| |
|
|
| T |
7179 |
cgccgcctccaggataaaacaagctcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacgccctcaaatattgtattaag |
7278 |
T |
 |
| Q |
260 |
accactcttttaatactgaaaccac |
284 |
Q |
| |
|
||||||| ||||||||||||||||| |
|
|
| T |
7279 |
accactc-tttaatactgaaaccac |
7302 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0182 (Bit Score: 132; Significance: 2e-68; HSPs: 1)
Name: scaffold0182
Description:
Target: scaffold0182; HSP #1
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 65 - 296
Target Start/End: Complemental strand, 10007 - 9772
Alignment:
| Q |
65 |
tatctatcgaagttgttactagattgagtcaagaccaggtcgtcctctttaatacgtttcgtgacactg----aaattgtataaggccgactatcaacca |
160 |
Q |
| |
|
|||||| ||||||||||||||| |||||||| |||||||||| |||||||| |||||||||| ||||| ||||||| ||||| |||||||||||| |
|
|
| T |
10007 |
tatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattgtgcaaggcagactatcaacca |
9908 |
T |
 |
| Q |
161 |
cgccgcctccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccttc-aatatggtactaag |
259 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||| || ||||||||||||||||||||||||||||||||||||||||| | |||||||||||||| |
|
|
| T |
9907 |
cgccgcctccaggataaaacaagcccagctacaactgttcgattaactactgcactgtagaaaaccgttcgagaattacacctccaaatatggtactaag |
9808 |
T |
 |
| Q |
260 |
accactcttttaatactgaaaccactccaatatggta |
296 |
Q |
| |
|
||||||| | |||||||||||||||| ||||||||| |
|
|
| T |
9807 |
accactc-tataatactgaaaccactttaatatggta |
9772 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0045 (Bit Score: 127; Significance: 2e-65; HSPs: 1)
Name: scaffold0045
Description:
Target: scaffold0045; HSP #1
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 5 - 283
Target Start/End: Original strand, 82993 - 83260
Alignment:
| Q |
5 |
ttgtttttggaattctaaattgttgtattttggtttttcaaattctattttaaaagagaatatctatcgaagttgttactagattgagtcaagaccaggt |
104 |
Q |
| |
|
||||||||||| ||||||| ||||||||||||||||| |||||||| |||| ||| ||||||||||||||| |||||||| |||||||| |
|
|
| T |
82993 |
ttgtttttggatttctaaactgttgtattttggttttccaaattctgtttt------------ctaccgaagttgttactaggttgagtcacgaccaggt |
83080 |
T |
 |
| Q |
105 |
cgtcctctttaatacgtttcgtgacactg----aaattgtataaggccgactatcaaccacgccgcctccaggataaaacaagttcagctacaactgtgc |
200 |
Q |
| |
|
|| |||||||| |||||||||||||| ||||| | ||||| |||||||||||| |||||||||||||||||||||| |||||| ||||||||| |
|
|
| T |
83081 |
cgctctctttaagacgtttcgtgacaccacccaaaattatgcaaggcagactatcaaccatgccgcctccaggataaaacaagctcagctgcaactgtgc |
83180 |
T |
 |
| Q |
201 |
ggttaactactgcactgtagaaaaccgttcgagaattacaccttcaatatggtactaagaccactcttttaatactgaaacca |
283 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||| |||||||||||| |
|
|
| T |
83181 |
ggttaactactgcactgtagaaaacctttcgagaattacaccttcaatatggtactaagatcactctt---atactgaaacca |
83260 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0002 (Bit Score: 126; Significance: 6e-65; HSPs: 2)
Name: scaffold0002
Description:
Target: scaffold0002; HSP #1
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 65 - 294
Target Start/End: Original strand, 4049 - 4282
Alignment:
| Q |
65 |
tatctatcgaagttgttactagattgagtcaagaccaggtcgtcctctttaatacgtttcgtgacactg----aaattgtataaggccgactatcaacca |
160 |
Q |
| |
|
|||||| ||||||||||||||| |||||||| |||||||||| |||||||| || ||||||| ||||| ||||||| ||||| |||||||||||| |
|
|
| T |
4049 |
tatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacatttcgtggcactgcccaaaattgtgcaaggcagactatcaacca |
4148 |
T |
 |
| Q |
161 |
cgccgcctccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccttc-aatatggtactaag |
259 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||| || |||||||||||||||||||||| |||||||||||||||||| | |||||||||||||| |
|
|
| T |
4149 |
cgccgcctccaggataaaacaagcccagctacaactgttcgattaactactgcactgtagaaaatcgttcgagaattacacctccaaatatggtactaag |
4248 |
T |
 |
| Q |
260 |
accactcttttaatactgaaaccactccaatatgg |
294 |
Q |
| |
|
||||||| |||||||||||||||||| ||||||| |
|
|
| T |
4249 |
accactc-tttaatactgaaaccactttaatatgg |
4282 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0002; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 118 - 280
Target Start/End: Complemental strand, 444010 - 443847
Alignment:
| Q |
118 |
acgtttcgtgacactg---aaattgtataaggccgactatcaaccacgccgcctccaggataaaacaagttcagctacaactgtgcggttaactactgca |
214 |
Q |
| |
|
|||||||||| ||||| ||||||| ||||| ||||||||||||||||| ||| ||||||||||||| |||||||||||||||||||||||| |||| |
|
|
| T |
444010 |
acgtttcgtggcactgccaaaattgtgcaaggcagactatcaaccacgccgtctc-aggataaaacaagcccagctacaactgtgcggttaacta-tgca |
443913 |
T |
 |
| Q |
215 |
ctgtagaaaaccgttcgagaattacaccttc-aatatggtactaagaccactcttttaatactgaaa |
280 |
Q |
| |
|
|| ||||||||||||||||||||||||| || ||||||||||||||||||||| ||||||||||||| |
|
|
| T |
443912 |
ctatagaaaaccgttcgagaattacaccctcaaatatggtactaagaccactc-tttaatactgaaa |
443847 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0054 (Bit Score: 105; Significance: 2e-52; HSPs: 2)
Name: scaffold0054
Description:
Target: scaffold0054; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 65 - 285
Target Start/End: Original strand, 25374 - 25598
Alignment:
| Q |
65 |
tatctatcgaagttgttactagattgagtcaagaccaggtcgtcctctttaatacgtttcgtgacactg----aaattgtataaggccgactatcaacca |
160 |
Q |
| |
|
|||||||||||||||||||||| |||||||| | ||||| |||||||| ||||| |||||||||| ||||||| ||| | |||||||||||| |
|
|
| T |
25374 |
tatctatcgaagttgttactaggttgagtcacaattaggtcactctctttaagacgttacgtgacactgcgtaaaattgtgcaagacagactatcaacca |
25473 |
T |
 |
| Q |
161 |
cgccgcctccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccttc-aatatggtactaag |
259 |
Q |
| |
|
|||||| |||||||||||||||| || ||||||||||||||||||||||| |||||||||||||||||||||| ||||| |||| |||||||||||||| |
|
|
| T |
25474 |
cgccgcgtccaggataaaacaagcccaactacaactgtgcggttaactactacactgtagaaaaccgttcgagacttacatcttcaaatatggtactaag |
25573 |
T |
 |
| Q |
260 |
accactcttttaatactgaaaccact |
285 |
Q |
| |
|
||||||| ||||||| |||||||||| |
|
|
| T |
25574 |
accactc-tttaatattgaaaccact |
25598 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0054; HSP #2
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 150 - 258
Target Start/End: Original strand, 29219 - 29327
Alignment:
| Q |
150 |
actatcaaccacgccgcctccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccttcaata |
249 |
Q |
| |
|
|||||||||||||||| || |||||||||| |||| | ||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
29219 |
actatcaaccacgccgtcttcaggataaaataagtctaactataactgtgcggttaactactgcattgtagaaaaccgttcgagaattacaccttcaata |
29318 |
T |
 |
| Q |
250 |
tggtactaa |
258 |
Q |
| |
|
|| |||||| |
|
|
| T |
29319 |
tgatactaa |
29327 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0012 (Bit Score: 100; Significance: 2e-49; HSPs: 1)
Name: scaffold0012
Description:
Target: scaffold0012; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 5 - 270
Target Start/End: Complemental strand, 166254 - 165997
Alignment:
| Q |
5 |
ttgtttttggaattctaaattgttgtattttggtttttcaaattctattttaaaagagaatatctatcgaagttgttactagattgagtcaagaccaggt |
104 |
Q |
| |
|
||||||||||| ||| ||| ||||||||||||||||| |||||||| |||| ||| |||| ||| |||||| |||||||| ||||||| |
|
|
| T |
166254 |
ttgtttttggatttccaaactgttgtattttggttttccaaattctgtttt------------ctaccgaaattgatactaggttgagtcacaaccaggt |
166167 |
T |
 |
| Q |
105 |
cgtcctctttaatacgtttcgtgacactg----aaattgtataaggccgactatcaaccacgccgcctccaggataaaacaagttcagctacaactgtgc |
200 |
Q |
| |
|
|| |||||||| |||||||||| ||||| ||||||| ||| | |||||||||||||||||||||||||||||||||| ||||| ||||||||| |
|
|
| T |
166166 |
cgctctctttaagacgtttcgtggcactgccaaaaattgtgcaagacatactatcaaccacgccgcctccaggataaaacaagcccagctgcaactgtgc |
166067 |
T |
 |
| Q |
201 |
ggttaactactgcactgtagaaaaccgttcgagaattacaccttcaatatggtactaagaccactctttt |
270 |
Q |
| |
|
|||||| |||||||||||| |||||||||||||||||||||||| | |||||||||||||||| |||||| |
|
|
| T |
166066 |
ggttaattactgcactgtaaaaaaccgttcgagaattacacctttactatggtactaagaccaatctttt |
165997 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0057 (Bit Score: 93; Significance: 3e-45; HSPs: 1)
Name: scaffold0057
Description:
Target: scaffold0057; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 73 - 234
Target Start/End: Original strand, 35617 - 35782
Alignment:
| Q |
73 |
gaagttgttactagattgagtcaagaccaggtcgtcctctttaatacgtttcgtgacactg----aaattgtataaggccgactatcaaccacgccgcct |
168 |
Q |
| |
|
|||||||||||||| || ||| | ||||| | || |||||||| |||||||||||||||| ||||||| ||||| |||||||||||||||||||| |
|
|
| T |
35617 |
gaagttgttactaggttaagttacgaccatgccgctctctttaagacgtttcgtgacactggccaaaattgtgcaaggcagactatcaaccacgccgcct |
35716 |
T |
 |
| Q |
169 |
ccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgaga |
234 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
35717 |
ccaggataaaacaagtccagctacaactgtgcggttaactactgcactgtagaaaatcgttcgaga |
35782 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0008 (Bit Score: 80; Significance: 2e-37; HSPs: 1)
Name: scaffold0008
Description:
Target: scaffold0008; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 43 - 247
Target Start/End: Original strand, 255770 - 255978
Alignment:
| Q |
43 |
caaattctattttaaaagagaatatctatcgaagttgttactagattgagtcaagaccaggtcgtcctctttaatacgtttcgtgacactg----aaatt |
138 |
Q |
| |
|
||||||||||| | |||||||||||||| | || ||||||||| || || || ||||||||| |||||||| | |||||||| |||| ||||| |
|
|
| T |
255770 |
caaattctattgtgaaagagaatatctaccaaatttgttactatgttaagacacgaccaggtcactctctttaagaggtttcgtggcactacccaaaatt |
255869 |
T |
 |
| Q |
139 |
gtataaggccgactatcaaccacgccgcctccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaatta |
238 |
Q |
| |
|
|| ||| | ||||||||| | ||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
255870 |
gtgcaagacatactatcaactatgccgcctccaggataaaacaagtccagctacaactgtgtggttaactactgcactgtagaaaaccgttcgaggatta |
255969 |
T |
 |
| Q |
239 |
caccttcaa |
247 |
Q |
| |
|
|||| |||| |
|
|
| T |
255970 |
caccctcaa |
255978 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1050 (Bit Score: 77; Significance: 1e-35; HSPs: 1)
Name: scaffold1050
Description:
Target: scaffold1050; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 143 - 255
Target Start/End: Original strand, 1197 - 1309
Alignment:
| Q |
143 |
aaggccgactatcaaccacgccgcctccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacacc |
242 |
Q |
| |
|
||||| |||||| |||||||| ||||||||| ||||||||||||||||| ||||||||||||||||||||||| ||||||| ||||||||| ||||||| |
|
|
| T |
1197 |
aaggcggactataaaccacgctgcctccaggcaaaaacaagttcagctacgactgtgcggttaactactgcactatagaaaatcgttcgagatttacacc |
1296 |
T |
 |
| Q |
243 |
ttcaatatggtac |
255 |
Q |
| |
|
||||||||||||| |
|
|
| T |
1297 |
ttcaatatggtac |
1309 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold2020 (Bit Score: 72; Significance: 1e-32; HSPs: 1)
Name: scaffold2020
Description:
Target: scaffold2020; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 150 - 269
Target Start/End: Original strand, 435 - 561
Alignment:
| Q |
150 |
actatcaaccacgccgcctccaggataaaacaagttcagctacaactgtgcg------gttaactactgcactgtagaaaaccgttcgagaattacacct |
243 |
Q |
| |
|
||||||||||||| |||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||| |||| ||||||| |
|
|
| T |
435 |
actatcaaccacgtcgcctccaggataaaacaagctcagctacaactgtgcgcgcgcggttaactactgcactgtagaaaaccgtttgagatttacaccc |
534 |
T |
 |
| Q |
244 |
tc-aatatggtactaagaccactcttt |
269 |
Q |
| |
|
|| |||| ||||||||||||||||||| |
|
|
| T |
535 |
tcaaatacggtactaagaccactcttt |
561 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0009 (Bit Score: 72; Significance: 1e-32; HSPs: 1)
Name: scaffold0009
Description:
Target: scaffold0009; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 150 - 269
Target Start/End: Complemental strand, 165060 - 164934
Alignment:
| Q |
150 |
actatcaaccacgccgcctccaggataaaacaagttcagctacaactgtgcg------gttaactactgcactgtagaaaaccgttcgagaattacacct |
243 |
Q |
| |
|
||||||||||||| |||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||| |||| ||||||| |
|
|
| T |
165060 |
actatcaaccacgtcgcctccaggataaaacaagctcagctacaactgtgcgcgcgcggttaactactgcactgtagaaaaccgtttgagatttacaccc |
164961 |
T |
 |
| Q |
244 |
tc-aatatggtactaagaccactcttt |
269 |
Q |
| |
|
|| |||| ||||||||||||||||||| |
|
|
| T |
164960 |
tcaaatacggtactaagaccactcttt |
164934 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0128 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0128
Description:
Target: scaffold0128; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 110 - 265
Target Start/End: Original strand, 13292 - 13451
Alignment:
| Q |
110 |
tctttaatacgtttcgtgacactg----aaattgtataaggccgactatcaaccacgccgcctccaggataaaacaagttcagctacaactgtgcggtta |
205 |
Q |
| |
|
||||||| |||||| ||||||||| ||||||| |||| |||||||||||| | ||||||| |||| |||||||||| ||||||||||||||||| |
|
|
| T |
13292 |
tctttaagacgtttggtgacactgcccaaaattgttcaaggtagactatcaaccatggtgcctccaagatacaacaagttcaactacaactgtgcggtta |
13391 |
T |
 |
| Q |
206 |
actactgcactgtagaaaaccgttcgagaattacaccttcaatatggtactaagaccact |
265 |
Q |
| |
|
|||||| |||||||||||| ||||| | |||||||| |||||||||||||||||||| |
|
|
| T |
13392 |
actacttcactgtagaaaatggttcgcaatttacacctctaatatggtactaagaccact |
13451 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0184 (Bit Score: 61; Significance: 4e-26; HSPs: 1)
Name: scaffold0184
Description:
Target: scaffold0184; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 69 - 242
Target Start/End: Original strand, 2288 - 2464
Alignment:
| Q |
69 |
tatcgaagttgttactagattgagtcaagaccaggtcgtcctctttaatacgtttcgtgacactg----aaattgtataaggccgactatcaaccacgcc |
164 |
Q |
| |
|
|||||||||||||| ||| |||||||| || |||||||| ||||||||||||||| ||| || || ||||||| ||| | || ||||||||||||| |
|
|
| T |
2288 |
tatcgaagttgttattaggttgagtcatgatcaggtcgttctctttaatacgttttgtgccattgtttaaaattgtgcaagacaga-tatcaaccacgcc |
2386 |
T |
 |
| Q |
165 |
gcctccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacacc |
242 |
Q |
| |
|
||||| || ||||||||| |||| |||||||||| | ||||||||||||| |||||||| ||| |||||||||||| |
|
|
| T |
2387 |
gcctctagtataaaacaaactcaggtacaactgtgagattaactactgcaccgtagaaaattgttggagaattacacc |
2464 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0097 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0097
Description:
Target: scaffold0097; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 5 - 101
Target Start/End: Original strand, 15199 - 15295
Alignment:
| Q |
5 |
ttgtttttggaattctaaattgttgtattttggtttttcaaattctattttaaaagagaatatctatcgaagttgttactagattgagtcaagacca |
101 |
Q |
| |
|
||||||||||| || ||| ||||||||||||||||| ||||||||||||| |||| |||||||| ||||||||||||||| |||||||| ||||| |
|
|
| T |
15199 |
ttgtttttggatttacaaactgttgtattttggttttccaaattctattttttaagaaaatatctaccgaagttgttactaggttgagtcacgacca |
15295 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0011 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0011
Description:
Target: scaffold0011; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 155 - 213
Target Start/End: Complemental strand, 155544 - 155486
Alignment:
| Q |
155 |
caaccacgccgcctccaggataaaacaagttcagctacaactgtgcggttaactactgc |
213 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
155544 |
caaccacgccgcctctaggataaaacaagttcagctacaactgtgcgattaactactgc |
155486 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0240 (Bit Score: 38; Significance: 0.000000000002; HSPs: 3)
Name: scaffold0240
Description:
Target: scaffold0240; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 101
Target Start/End: Original strand, 3906 - 4002
Alignment:
| Q |
5 |
ttgtttttggaattctaaattgttgtattttggtttttcaaattctatttta-aaagagaatatctatcgaagttgttactagattgagtcaagacca |
101 |
Q |
| |
|
||||||||||| || ||||||| |||||| | ||||||||||||||||| ||| |||||||||| ||||||||||||||| |||||||| ||||| |
|
|
| T |
3906 |
ttgtttttggattttaaaattgtcgtattt-gaattttcaaattctatttttgaaaaagaatatctaccgaagttgttactaggttgagtcacgacca |
4002 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0240; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 205 - 269
Target Start/End: Original strand, 4092 - 4157
Alignment:
| Q |
205 |
aactactgcactgtagaaaaccgttcgagaattacacc-ttcaatatggtactaagaccactcttt |
269 |
Q |
| |
|
|||||||||| ||||||||||| ||||||| ||| ||| || |||||||||||||||||||||||| |
|
|
| T |
4092 |
aactactgcattgtagaaaaccattcgagatttatacccttaaatatggtactaagaccactcttt |
4157 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0240; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 153 - 183
Target Start/End: Original strand, 4058 - 4088
Alignment:
| Q |
153 |
atcaaccacgccgcctccaggataaaacaag |
183 |
Q |
| |
|
||||||||||||||||||||||||||||||| |
|
|
| T |
4058 |
atcaaccacgccgcctccaggataaaacaag |
4088 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0015 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0015
Description:
Target: scaffold0015; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 149 - 242
Target Start/End: Original strand, 8953 - 9046
Alignment:
| Q |
149 |
gactatcaaccacgccgcctccaggataaaacaagttcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacacc |
242 |
Q |
| |
|
||||||||| |||| ||||| ||||||||||||||| |||| |||| |||| |||||||||||| |||| |||| | ||| ||||||||||| |
|
|
| T |
8953 |
gactatcaatcacgtcgccttcaggataaaacaagtctagctgtaactatgcgattaactactgcattgtacaaaatcattcaagaattacacc |
9046 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0132 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0132
Description:
Target: scaffold0132; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 88 - 181
Target Start/End: Complemental strand, 2868 - 2772
Alignment:
| Q |
88 |
ttgagtcaagaccaggtcgtcctctttaatacgtttcgtgacact---gaaattgtataaggccgactatcaaccacgccgcctccaggataaaaca |
181 |
Q |
| |
|
|||||||| |||||||||| |||||||| ||||||||||||||| || |||| |||| ||||| ||||||||||| ||||||||||||||| |
|
|
| T |
2868 |
ttgagtcacgaccaggtcgcgctctttaagacgtttcgtgacactacccaagttgtgcaaggtagactaacaaccacgccgtctccaggataaaaca |
2772 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0132; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 88 - 181
Target Start/End: Complemental strand, 10828 - 10732
Alignment:
| Q |
88 |
ttgagtcaagaccaggtcgtcctctttaatacgtttcgtgacact---gaaattgtataaggccgactatcaaccacgccgcctccaggataaaaca |
181 |
Q |
| |
|
|||||||| |||||||||| |||||||| ||||||||||||||| || |||| |||| ||||| ||||||||||| ||||||||||||||| |
|
|
| T |
10828 |
ttgagtcacgaccaggtcgcgctctttaagacgtttcgtgacactacccaagttgtgcaaggtagactaacaaccacgccgtctccaggataaaaca |
10732 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0690 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0690
Description:
Target: scaffold0690; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 206 - 268
Target Start/End: Original strand, 5410 - 5473
Alignment:
| Q |
206 |
actactgcactgtagaaaaccgttcgagaattacaccttcaa-tatggtactaagaccactctt |
268 |
Q |
| |
|
|||| ||||| ||||||||| ||| |||| ||||||| |||| ||||||||||||||||||||| |
|
|
| T |
5410 |
actattgcaccgtagaaaactgtttgagatttacaccctcaaatatggtactaagaccactctt |
5473 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0061 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0061
Description:
Target: scaffold0061; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 246 - 283
Target Start/End: Original strand, 45944 - 45980
Alignment:
| Q |
246 |
aatatggtactaagaccactcttttaatactgaaacca |
283 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
45944 |
aatatggtactaagaccactc-tttaatactgaaacca |
45980 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0060 (Bit Score: 30; Significance: 0.0000001; HSPs: 2)
Name: scaffold0060
Description:
Target: scaffold0060; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 246 - 283
Target Start/End: Complemental strand, 47792 - 47756
Alignment:
| Q |
246 |
aatatggtactaagaccactcttttaatactgaaacca |
283 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
47792 |
aatatggtactaagaccactc-tttaatactgaaacca |
47756 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0060; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 246 - 283
Target Start/End: Complemental strand, 52835 - 52799
Alignment:
| Q |
246 |
aatatggtactaagaccactcttttaatactgaaacca |
283 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
52835 |
aatatggtactaagaccactc-tttaatactgaaacca |
52799 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0020 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0020
Description:
Target: scaffold0020; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 246 - 283
Target Start/End: Complemental strand, 1161 - 1125
Alignment:
| Q |
246 |
aatatggtactaagaccactcttttaatactgaaacca |
283 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
1161 |
aatatggtactaagaccactc-tttaatactgaaacca |
1125 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0017 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0017
Description:
Target: scaffold0017; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 246 - 283
Target Start/End: Complemental strand, 152843 - 152807
Alignment:
| Q |
246 |
aatatggtactaagaccactcttttaatactgaaacca |
283 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
152843 |
aatatggtactaagaccactc-tttaatactgaaacca |
152807 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University