View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11915_low_36 (Length: 265)
Name: NF11915_low_36
Description: NF11915
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11915_low_36 |
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Alignment Details
Target: chr8 (Bit Score: 177; Significance: 2e-95; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 8 - 230
Target Start/End: Original strand, 37254744 - 37254959
Alignment:
| Q |
8 |
gacgttggagtagtcacaagaacaaggactagagtctagaagaattaattaggacgtttatgtactgtatgaatgagtttgaatttaacttgtatggata |
107 |
Q |
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| T |
37254744 |
gacgtaggagtagtcacaagaacaaggactagagtctagaagaattaattaggacgtttatatactctatgaatgagtttgaatttaacttgtatggat- |
37254842 |
T |
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| Q |
108 |
atggattgattcctatcatcaataaaagaaaagataatgttgtaaatggtaaagatggtgaatgtgataatgaagcaggaaattgtggacatttgttggt |
207 |
Q |
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| T |
37254843 |
------tggttcctatcatcgataaaagaaaagataatgttgtaaatggtaaagatggtgaatgtgataatgaagcaggaaattgtggacatttgttggt |
37254936 |
T |
|
| Q |
208 |
cgataatgagtttggaattttta |
230 |
Q |
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| T |
37254937 |
cgataatgagtttggaattttta |
37254959 |
T |
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