View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11915_low_41 (Length: 249)
Name: NF11915_low_41
Description: NF11915
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11915_low_41 |
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Alignment Details
Target: chr8 (Bit Score: 228; Significance: 1e-126; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 37254521 - 37254282
Alignment:
| Q |
1 |
ttcatttcatgccaatattatcaacaataatatatttaccaagaatacgaatgagaaattgaccattctagttcaatcaaaaaataagagcccgcaagtg |
100 |
Q |
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| T |
37254521 |
ttcatttcatgccaatattatcaacaataatatatttaccaagaatacgaatgagaaattgaccatgctagttcaatcaaaaaataagagcccgcaagtg |
37254422 |
T |
|
| Q |
101 |
caacacacaagaacataatacatttgatttctcgttagtcatttccatgggtaacacatgcatgtttggttgaatttaaatgcatgaaaataacaatact |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37254421 |
caacacacaagaacataatacatttgatttctcgttagtcatttccatgagtaacacatgcatgtttggttgaatttaaatgcatgaaaataacaatact |
37254322 |
T |
|
| Q |
201 |
agtgaggctcgatgcataaatatattgcatttggtctctg |
240 |
Q |
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||||| |||||||||||||||||||||||||||||||||| |
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| T |
37254321 |
agtgatgctcgatgcataaatatattgcatttggtctctg |
37254282 |
T |
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