View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF11916_high_2 (Length: 822)
Name: NF11916_high_2
Description: NF11916
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11916_high_2 |
 | |
|
Alignment Details
Target: chr4 (Bit Score: 743; Significance: 0; HSPs: 7)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 743; E-Value: 0
Query Start/End: Original strand, 1 - 815
Target Start/End: Complemental strand, 23597353 - 23596539
Alignment:
| Q |
1 |
cccgacaactcaaacttgcccaacaaattgttatcacgagtccttgttctttctccttcgtagacctgaatcagcacaccaggttggttatcagaatagg |
100 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
23597353 |
cccgacagctcaaacttgcccaacaaattgttatcacgagtccttgttctttctccttcgtagacctgaatcagcacaccaggttggttatcagaatagg |
23597254 |
T |
|
| Q |
101 |
tcgaaaacacctgctccttcttggtaggaattgttgtgtttctcggaattaacacagtcatgactcctcctgcagtctccaaaccaagggaaagaggagt |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
23597253 |
tcgaaaacacctgctccttcttggtaggaattgttgtgtttctcggaattaacacagtcatgactcctcctgcagtctccaaaccaagggaaagaggagt |
23597154 |
T |
|
| Q |
201 |
aacatccagcaacaaaagatcctgttctttctcattgccttcgccgctcaaaatagcagcttggactgcagcgccataagcaacagcctcatcagggttg |
300 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
23597153 |
aacatccagcaacaaaagatcctgtactttctcattgccttcgccgctcaaaatagcagcttggactgcagcgccataagcaacagcctcatcagggttg |
23597054 |
T |
|
| Q |
301 |
atgctcttacaaagttccttcccattgaagaaatcttgcaaaagttgttgaaccttgggaatcctagtggatccaccaacaagaacaacgtcatggacac |
400 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| |||| |||| |
|
|
| T |
23597053 |
atgctcttacaaagttccttcccattgaagaaatcttgcaaaagttgttgaaccttgggaatcctagtcgatccgccaacaagaacaacatcatcaacac |
23596954 |
T |
|
| Q |
401 |
tgttcttatccatcttagcatccctcaagcacttctcaacaggctccatacacttcctaaacagatccatgttgagctcttcaaaacgagcacgagtgat |
500 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| || |
|
|
| T |
23596953 |
tgttcttatccatcttagcatccctcaaacacttctcaacaggctccatacacttcctaaatagatccatgttgagctcttcaaaacgagcgcgagtaat |
23596854 |
T |
|
| Q |
501 |
ggtagtgtaaaagtcaataccctcaaacaatgaatcaatttcaatggtggtttgagcagtagaggaaagggtcctcttagctctctcgcaagcagttctc |
600 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||| |
|
|
| T |
23596853 |
ggtagtgtaaaagtcaataccctcaaacaaagaatcaatttcaatggtggtttgagcagtagaggaaagagtcctcttagctctctcacaagcagttctc |
23596754 |
T |
|
| Q |
601 |
aatcttctaagagcccttggatttccactaatatccttcttattcttcctcttgaattcttgaacaaaatggttcaccatcctgttatcaaaatcttcac |
700 |
Q |
| |
|
|| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
23596753 |
aaccttctaagagcccttggatttccactaatatctttcttattcttcctcttgaattcttgaacaaaatggttcaccatcctgttatcaaaatcttcac |
23596654 |
T |
|
| Q |
701 |
ctcccaaatgtgtatcaccagctgtagctttcacctcaaagataccttcttcaatagtaagtagtgaaacatcaaaagttccaccaccaagatcgaaaat |
800 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
23596653 |
ctcccaaatgtgtatcaccagctgtagctttcacctcaaagataccttcctcaatagtaagaagtgaaacatcaaaagttccaccaccaagatcgaaaat |
23596554 |
T |
|
| Q |
801 |
aagaacgttcttctc |
815 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
23596553 |
aagaacgttcttctc |
23596539 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 675; E-Value: 0
Query Start/End: Original strand, 1 - 815
Target Start/End: Complemental strand, 23588501 - 23587687
Alignment:
| Q |
1 |
cccgacaactcaaacttgcccaacaaattgttatcacgagtccttgttctttctccttcgtagacctgaatcagcacaccaggttggttatcagaatagg |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||| ||||||| |||||||||||| |||||||| |||| |
|
|
| T |
23588501 |
cccgacaactcaaacttgcccaacaaattgttatcacgagtccttgttctttcgccttcatagacttgaatcaacacaccaggttgattatcagagtagg |
23588402 |
T |
|
| Q |
101 |
tcgaaaacacctgctccttcttggtaggaattgttgtgtttctcggaattaacacagtcatgactcctcctgcagtctccaaaccaagggaaagaggagt |
200 |
Q |
| |
|
| |||||||| |||||||||||||||||||| ||||||||||| ||||| || ||||||||||| |||||||| ||||||||||||||||| |||||||| |
|
|
| T |
23588401 |
ttgaaaacacttgctccttcttggtaggaatggttgtgtttctaggaatcaatacagtcatgacacctcctgcggtctccaaaccaagggagagaggagt |
23588302 |
T |
|
| Q |
201 |
aacatccagcaacaaaagatcctgttctttctcattgccttcgccgctcaaaatagcagcttggactgcagcgccataagcaacagcctcatcagggttg |
300 |
Q |
| |
|
||||||||||||||| |||||||| ||||||||||||| || || |||||||||||||||||||| || || ||||| |||||||| ||||| |||||| |
|
|
| T |
23588301 |
aacatccagcaacaacagatcctgcactttctcattgccctcaccactcaaaatagcagcttggacggctgccccatatgcaacagcttcatcggggttg |
23588202 |
T |
|
| Q |
301 |
atgctcttacaaagttccttcccattgaagaaatcttgcaaaagttgttgaaccttgggaatcctagtggatccaccaacaagaacaacgtcatggacac |
400 |
Q |
| |
|
|||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
23588201 |
atgctcttacaaagctcctttccattgaagaaatcttgcaaaagttgttgaaccttgggaatcctagtggatccaccaacaagaacaacatcatggacac |
23588102 |
T |
|
| Q |
401 |
tgttcttatccatcttagcatccctcaagcacttctcaacaggctccatacacttcctaaacagatccatgttgagctcttcaaaacgagcacgagtgat |
500 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
23588101 |
tgttcttatccatcttagcatccctcaaacacttctcaacaggctccatacacttcctaaacagatccatgttgagctcttcaaaacgagcccgagtgat |
23588002 |
T |
|
| Q |
501 |
ggtagtgtaaaagtcaataccctcaaacaatgaatcaatttcaatggtggtttgagcagtagaggaaagggtcctcttagctctctcgcaagcagttctc |
600 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
23588001 |
ggtagtgtaaaagtcaataccctcaaacaatgaatcaatttcaatggtggtttgagcagtagaggaaagggtcctcttagctctctcgcaagcagttctc |
23587902 |
T |
|
| Q |
601 |
aatcttctaagagcccttggatttccactaatatccttcttattcttcctcttgaattcttgaacaaaatggttcaccatcctgttatcaaaatcttcac |
700 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
23587901 |
aatcttctaagagcccttggatttccactaatatccttcttattcttcctcttgaattcttgaacaaaatggttcaccatcctgttatcaaaatcttcac |
23587802 |
T |
|
| Q |
701 |
ctcccaaatgtgtatcaccagctgtagctttcacctcaaagataccttcttcaatagtaagtagtgaaacatcaaaagttccaccaccaagatcgaaaat |
800 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
23587801 |
ctcccaaatgtgtatcaccagctgtagctttgacctcaaagataccttcctcaatagtaagtagggaaacatcaaaagttccaccaccaagatcgaaaat |
23587702 |
T |
|
| Q |
801 |
aagaacgttcttctc |
815 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
23587701 |
aagaacgttcttctc |
23587687 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 213; E-Value: 1e-116
Query Start/End: Original strand, 67 - 811
Target Start/End: Original strand, 54395889 - 54396633
Alignment:
| Q |
67 |
tgaatcagcacaccaggttggttatcagaataggtcgaaaacacctgctccttcttggtaggaattgttgtgtttctcggaattaacacagtcatgactc |
166 |
Q |
| |
|
||||||| ||||||||||||||||| || || || || || | |||||||||||| |||||||| || ||||| || ||||| || ||||| || | |
|
|
| T |
54395889 |
tgaatcaaaacaccaggttggttatctgagtaagttgagaaaatctgctccttcttcgtaggaatcgtcgtgttccttggaatcaaagtcgtcataacac |
54395988 |
T |
|
| Q |
167 |
ctcctgcagtctccaaaccaagggaaagaggagtaacatccagcaacaaaagatcctgttctttctcattgccttcgccgctcaaaatagcagcttggac |
266 |
Q |
| |
|
| || ||||| ||||| || | ||||||||||||||| ||||||| |||||| || | || |||| ||||| ||||||||||| || ||||| || |
|
|
| T |
54395989 |
caccagcagtttccaaccccaaactaagaggagtaacatcaagcaacagaagatcttgaaccttttcatcaccttcaccgctcaaaatcgctgcttgaac |
54396088 |
T |
|
| Q |
267 |
tgcagcgccataagcaacagcctcatcagggttgatgctcttacaaagttccttcccattgaagaaatcttgcaaaagttgttgaaccttgggaatccta |
366 |
Q |
| |
|
||||| |||||||||||||| ||||||||||| || ||||| ||||| || ||||||||||||||||| |||||||| |||||||| || |||||||| |
|
|
| T |
54396089 |
agcagcaccataagcaacagcttcatcagggttaatactcttgcaaagctctttcccattgaagaaatcctgcaaaagctgttgaacttttggaatcctt |
54396188 |
T |
|
| Q |
367 |
gtggatccaccaacaagaacaacgtcatggacactgttcttatccatcttagcatccctcaagcacttctcaacaggctccatacacttcctaaacagat |
466 |
Q |
| |
|
|| |||||||||||||||||||| ||||| ||| ||||||| |||||||||||||| | |||||||||||||| |||||||| |||||||||| || |
|
|
| T |
54396189 |
gttgatccaccaacaagaacaacttcatgaacatgactcttatcaatcttagcatcccttagacacttctcaacaggttccatacatttcctaaacaaat |
54396288 |
T |
|
| Q |
467 |
ccatgttgagctcttcaaaacgagcacgagtgatggtagtgtaaaagtcaataccctcaaacaatgaatcaatttcaatggtggtttgagcagtagagga |
566 |
Q |
| |
|
|||| || | |||||||| | || | || || || | || || ||||| || |||||||| ||||||||||| || || || |||||||| || || |
|
|
| T |
54396289 |
ccatattcaattcttcaaatctcgcccttgtaatagttgcatagaaatcaattccttcaaacaaagaatcaatttctattgttgtctgagcagttgaaga |
54396388 |
T |
|
| Q |
567 |
aagggtcctcttagctctctcgcaagcagttctcaatcttctaagagcccttggatttccactaatatccttcttattcttcctcttgaattcttgaaca |
666 |
Q |
| |
|
||| || |||||||||||||| ||||| ||||| ||||| || | ||| |||| ||| |||||||||||||||||||| |||||| | || || |||| |
|
|
| T |
54396389 |
aagtgttctcttagctctctcacaagctgttcttaatctcctcaaagctcttgcattaccactaatatccttcttatttttcctcctaaactccgaaaca |
54396488 |
T |
|
| Q |
667 |
aaatggttcaccatcctgttatcaaaatcttcacctcccaaatgtgtatcaccagctgtagctttcacctcaaagataccttcttcaatagtaagtagtg |
766 |
Q |
| |
|
||||| |||||||| |||||||||||||||||||| || | ||| ||||||||||| ||||||||||| || ||||| ||||||||||||||||| || | |
|
|
| T |
54396489 |
aaatgattcaccattctgttatcaaaatcttcaccaccaagatgagtatcaccagcagtagctttcacttcgaagatcccttcttcaatagtaagaagag |
54396588 |
T |
|
| Q |
767 |
aaacatcaaaagttccaccaccaagatcgaaaataagaacgttct |
811 |
Q |
| |
|
||||||| ||||||||||| || | || |||||||| ||||||| |
|
|
| T |
54396589 |
aaacatcgaaagttccacctcccaagtcaaaaataagcacgttct |
54396633 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 247 - 388
Target Start/End: Complemental strand, 9336413 - 9336272
Alignment:
| Q |
247 |
ctcaaaatagcagcttggactgcagcgccataagcaacagcctcatcagggttgatgctcttacaaagttccttcccattgaagaaatcttgcaaaagtt |
346 |
Q |
| |
|
||||||||||||||||| || || || |||||||||||||||||||| |||||||| | | | | | ||||||||| ||||| || ||| |||| |||| |
|
|
| T |
9336413 |
ctcaaaatagcagcttgaacagctgcaccataagcaacagcctcatctgggttgatacccatgaataattccttccccttgaaaaattctagcaatagtt |
9336314 |
T |
|
| Q |
347 |
gttgaaccttgggaatcctagtggatccaccaacaagaacaa |
388 |
Q |
| |
|
||| || || |||||||||| || ||||| |||||||||| |
|
|
| T |
9336313 |
cttgcactttcggaatcctagacgagccacccacaagaacaa |
9336272 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 255 - 422
Target Start/End: Original strand, 35132110 - 35132278
Alignment:
| Q |
255 |
agcagcttggactgcagcgccataagcaacagcctcatcagggttgatgctcttacaaagttccttcccattgaagaaatcttgcaaaagttgttgaacc |
354 |
Q |
| |
|
|||||| || ||||| || |||||||| ||||||||||| ||||| |||||||| || | |||||||| ||||| || | |||||| || || || || |
|
|
| T |
35132110 |
agcagcctgaactgctgccccataagctacagcctcatcggggttaatgctcttgcacaactccttccctttgaaaaagttttgcaatagctgctgcact |
35132209 |
T |
|
| Q |
355 |
ttgggaatcctagtggatccaccaacaagaacaacgtcatggacac-tgttcttatccatcttagcatc |
422 |
Q |
| |
|
||||||||||||| || || |||||||||||||| |||| || | || |||| |||||||||||||| |
|
|
| T |
35132210 |
ttgggaatcctagaagaccctccaacaagaacaacatcatctacccttgctcttgtccatcttagcatc |
35132278 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 279 - 388
Target Start/End: Original strand, 30774930 - 30775039
Alignment:
| Q |
279 |
agcaacagcctcatcagggttgatgctcttacaaagttccttcccattgaagaaatcttgcaaaagttgttgaaccttgggaatcctagtggatccacca |
378 |
Q |
| |
|
|||||| ||||||||||| ||||||||||| || | ||||||||||||||||||| |||| |||| || || ||||||||||||| || ||||| |
|
|
| T |
30774930 |
agcaactgcctcatcaggattgatgctcttgcacaaatccttcccattgaagaaattacgcaatagttcctgcactttgggaatcctagaagaaccaccg |
30775029 |
T |
|
| Q |
379 |
acaagaacaa |
388 |
Q |
| |
|
|||||||||| |
|
|
| T |
30775030 |
acaagaacaa |
30775039 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 753 - 797
Target Start/End: Original strand, 35132600 - 35132644
Alignment:
| Q |
753 |
aatagtaagtagtgaaacatcaaaagttccaccaccaagatcgaa |
797 |
Q |
| |
|
||||||||||| ||||||||||||||| ||||||||||||||||| |
|
|
| T |
35132600 |
aatagtaagtattgaaacatcaaaagtgccaccaccaagatcgaa |
35132644 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 268; Significance: 1e-149; HSPs: 26)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 268; E-Value: 1e-149
Query Start/End: Original strand, 9 - 788
Target Start/End: Original strand, 8102075 - 8102854
Alignment:
| Q |
9 |
ctcaaacttgcccaacaaattgttatcacgagtccttgttctttctccttcgtagacctgaatcagcacaccaggttggttatcagaataggtcgaaaac |
108 |
Q |
| |
|
||||||||| |||||||| |||||||| || || ||||| || ||||| || || || |||| |||||||||||||| || ||||| || || || |
|
|
| T |
8102075 |
ctcaaacttacccaacaagttgttatccttggttctggttctctcaccttcataaacttggatcaaaacaccaggttggttgtctgaatacgtagagaaa |
8102174 |
T |
|
| Q |
109 |
acctgctccttcttggtaggaattgttgtgtttctcggaattaacacagtcatgactcctcctgcagtctccaaaccaagggaaagaggagtaacatcca |
208 |
Q |
| |
|
|| |||||||||||||| ||||| || ||||| || ||||| || ||||||||||| |||||||||||||||||||| | || | || || ||||||| |
|
|
| T |
8102175 |
acttgctccttcttggttggaatggtagtgttccttggaatcaatacagtcatgacacctcctgcagtctccaaaccttgagacaatggggtgacatcca |
8102274 |
T |
|
| Q |
209 |
gcaacaaaagatcctgttctttctcattgccttcgccgctcaaaatagcagcttggactgcagcgccataagcaacagcctcatcagggttgatgctctt |
308 |
Q |
| |
|
| ||| | ||| || | |||||||| ||||| || ||||| ||||||||||| || || || ||||||||||||||||| || ||||||||||| || |
|
|
| T |
8102275 |
aaagcaacaaatcttgaaccttctcatttccttcaccactcaagatagcagcttgaacagcggcaccataagcaacagcctcgtcggggttgatgctttt |
8102374 |
T |
|
| Q |
309 |
acaaagttccttcccattgaagaaatcttgcaaaagttgttgaaccttgggaatcctagtggatccaccaacaagaacaacgtcatggacactgttctta |
408 |
Q |
| |
|
|| || ||||| ||||||||||| |||||||| ||||| ||||| |||||||||||||| || ||||||||||||||||| ||||| || || |||| |
|
|
| T |
8102375 |
gcatagctccttaccattgaagaagtcttgcaacagttgctgaactttgggaatcctagttgaaccaccaacaagaacaacatcatgaactgtgctcttg |
8102474 |
T |
|
| Q |
409 |
tccatcttagcatccctcaagcacttctcaacaggctccatacacttcctaaacagatccatgttgagctcttcaaaacgagcacgagtgatggtagtgt |
508 |
Q |
| |
|
|||||||||||||| ||||| ||||||||||||||||||||||||||||| |||||||||||||| || || ||||| | ||||| ||||| || |||| |
|
|
| T |
8102475 |
tccatcttagcatctctcaaacacttctcaacaggctccatacacttcctgaacagatccatgttaagttcctcaaatctggcacgggtgattgtggtgt |
8102574 |
T |
|
| Q |
509 |
aaaagtcaataccctcaaacaatgaatcaatttcaatggtggtttgagcagtagaggaaagggtcctcttagctctctcgcaagcagttctcaatcttct |
608 |
Q |
| |
|
|||| |||| |||||||||||| |||||||| |||||||| ||||| || || || || || || ||||| |||||||| || || ||||||||||| || |
|
|
| T |
8102575 |
aaaaatcaacaccctcaaacaaagaatcaatctcaatggtagtttgtgcggttgatgagagagttctcttcgctctctcacatgcggttctcaatctcct |
8102674 |
T |
|
| Q |
609 |
aagagcccttggatttccactaatatccttcttattcttcctcttgaattcttgaacaaaatggttcaccatcctgttatcaaaatcttcacctcccaaa |
708 |
Q |
| |
|
||| ||||| || ||||| |||||||||||||| ||||||||||| || ||||||||||||||| | ||||| |||||||||||||||||||| || | | |
|
|
| T |
8102675 |
aagtgccctagggtttccgctaatatccttcttgttcttcctcttaaactcttgaacaaaatgggtaaccattctgttatcaaaatcttcaccaccaaga |
8102774 |
T |
|
| Q |
709 |
tgtgtatcaccagctgtagctttcacctcaaagataccttcttcaatagtaagtagtgaaacatcaaaagttccaccacc |
788 |
Q |
| |
|
|| |||||||| || ||||| || || ||||| ||||| |||||||||||||| ||||| ||||||||||| |||||||| |
|
|
| T |
8102775 |
tgggtatcacctgcagtagccttaacttcaaatataccctcttcaatagtaagaagtgacacatcaaaagtaccaccacc |
8102854 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 70 - 785
Target Start/End: Complemental strand, 8018112 - 8017397
Alignment:
| Q |
70 |
atcagcacaccaggttggttatcagaataggtcgaaaacacctgctccttcttggtaggaattgttgtgtttctcggaattaacacagtcatgactcctc |
169 |
Q |
| |
|
|||| |||||||||||||||||| || || || || || || |||||||||||||| |||||||| ||||| || |||||||| ||||||||||| || | |
|
|
| T |
8018112 |
atcaacacaccaggttggttatctgagtaagtagagaaaacttgctccttcttggttggaattgtggtgttccttggaattaatacagtcatgacaccac |
8018013 |
T |
|
| Q |
170 |
ctgcagtctccaaaccaagggaaagaggagtaacatccagcaacaaaagatcctgttctttctcattgccttcgccgctcaaaatagcagcttggactgc |
269 |
Q |
| |
|
| ||||| || | ||| || || | ||||| ||||||| | || | ||| || | || ||||||||||| || |||||||| || ||||| || || |
|
|
| T |
8018012 |
cagcagtttctagacccagagacaatggagtgacatccaaaagcagcaaatcttgaaccttttcattgccttcaccactcaaaattgctgcttgtacagc |
8017913 |
T |
|
| Q |
270 |
agcgccataagcaacagcctcatcagggttgatgctcttacaaagttccttcccattgaagaaatcttgcaaaagttgttgaaccttgggaatcctagtg |
369 |
Q |
| |
|
|| ||||||||||||||||| || |||||||| ||||| ||||| || || |||||||||||||||||||| ||||| ||||| |||||||| ||||| |
|
|
| T |
8017912 |
ggcaccataagcaacagcctcgtctgggttgatactcttgcaaagctctttaccattgaagaaatcttgcaacagttgctgaactttgggaattctagtt |
8017813 |
T |
|
| Q |
370 |
gatccaccaacaagaacaacgtcatggacactgttcttatccatcttagcatccctcaagcacttctcaacaggctccatacacttcctaaacagatcca |
469 |
Q |
| |
|
|| || |||||||||||||| ||||| ||| |||||| |||||||||||||| ||||| |||||||||||||||||||||||||| || |||||||||| |
|
|
| T |
8017812 |
gaaccgccaacaagaacaacatcatgaacagagttcttgtccatcttagcatctctcaaacacttctcaacaggctccatacactttctgaacagatcca |
8017713 |
T |
|
| Q |
470 |
tgttgagctcttcaaaacgagcacgagtgatggtagtgtaaaagtcaataccctcaaacaatgaatcaatttcaatggtggtttgagcagtagaggaaag |
569 |
Q |
| |
|
|||| || || ||||| | ||||| ||||| || |||||||| |||| |||||||||||| |||||||| |||||||| ||||| |||||||| || || |
|
|
| T |
8017712 |
tgttaagttcctcaaatcttgcacgggtgattgtggtgtaaaaatcaacaccctcaaacaaagaatcaatctcaatggtagtttgtgcagtagaagagag |
8017613 |
T |
|
| Q |
570 |
ggtcctcttagctctctcgcaagcagttctcaatcttctaagagcccttggatttccactaatatccttcttattcttcctcttgaattcttgaacaaaa |
669 |
Q |
| |
|
|| ||||| |||||||| ||||| || ||||| || ||||| || || || |||||||||||||||||||| ||||||||||| || || ||||||||| |
|
|
| T |
8017612 |
agttctcttcgctctctcacaagctgtcctcaacctcctaagtgctctagggtttccactaatatccttcttgttcttcctcttaaactcctgaacaaaa |
8017513 |
T |
|
| Q |
670 |
tggttcaccatcctgttatcaaaatcttcacctcccaaatgtgtatcaccagctgtagctttcacctcaaagataccttcttcaatagtaagtagtgaaa |
769 |
Q |
| |
|
|| || ||||| ||||| |||||||||||||| || | ||| ||||||||||| ||||| || || ||||| ||||| |||||||||||||| || || | |
|
|
| T |
8017512 |
tgattaaccattctgttgtcaaaatcttcaccaccaagatgggtatcaccagcagtagccttaacttcaaaaataccctcttcaatagtaagaagagaca |
8017413 |
T |
|
| Q |
770 |
catcaaaagttccacc |
785 |
Q |
| |
|
|||||||||| ||||| |
|
|
| T |
8017412 |
catcaaaagtaccacc |
8017397 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 10 - 791
Target Start/End: Original strand, 39985055 - 39985836
Alignment:
| Q |
10 |
tcaaacttgcccaacaaattgttatcacgagtccttgttctttctccttcgtagacctgaatcagcacaccaggttggttatcagaataggtcgaaaaca |
109 |
Q |
| |
|
||||||||||||||||||||||| || | || ||||| || |||||||| | || || |||| ||| ||||| ||||| |||||||| || || || | |
|
|
| T |
39985055 |
tcaaacttgcccaacaaattgttgtctcttgttcttgtcctctctccttcaaaaacttggatcaacacgccaggctggttgtcagaatatgtagagaaaa |
39985154 |
T |
|
| Q |
110 |
cctgctccttcttggtaggaattgttgtgtttctcggaattaacacagtcatgactcctcctgcagtctccaaaccaagggaaagaggagtaacatccag |
209 |
Q |
| |
|
|||| || ||||| || ||||| || || || || || || | ||||||||| || || || ||||||||||||||||| || ||||| || ||||||| |
|
|
| T |
39985155 |
cctgttctttctttgttggaatagtggtattccttgggataagcacagtcatcacaccaccagcagtctccaaaccaagagatagaggggtgacatccaa |
39985254 |
T |
|
| Q |
210 |
caacaaaagatcctgttctttctcattgccttcgccgctcaaaatagcagcttggactgcagcgccataagcaacagcctcatcagggttgatgctctta |
309 |
Q |
| |
|
| | ||||||||| | ||||||||||| || || ||||| |||||||| || || ||||| ||||| ||||||||||||||||| || |||||||| |
|
|
| T |
39985255 |
aaggagaagatcctgaaccttctcattgccctcaccactcaagatagcagcctgaacagcagcaccatatgcaacagcctcatcaggatttatgctcttg |
39985354 |
T |
|
| Q |
310 |
caaagttccttcccattgaagaaatcttgcaaaagttgttgaaccttgggaatcctagtggatccaccaacaagaacaacgtcatggacactgttcttat |
409 |
Q |
| |
|
|| || ||||| || || ||||||||||||||||||||||||||||| ||||| || || || || || ||||| ||||| || |||||||| ||||| | |
|
|
| T |
39985355 |
catagctcctttccgttaaagaaatcttgcaaaagttgttgaacctttggaattctggtagaacctcctacaaggacaacatcgtggacacttttcttgt |
39985454 |
T |
|
| Q |
410 |
ccatcttagcatccctcaagcacttctcaacaggctccatacacttcctaaacagatccatgttgagctcttcaaaacgagcacgagtgatggtagtgta |
509 |
Q |
| |
|
||||||| ||||| ||||| || |||||||| ||||||||||| || ||||| ||||||||||||||||| ||||| | |||||||| |||| | ||| |
|
|
| T |
39985455 |
ccatcttggcatctctcaaacatttctcaactggctccatacattttctaaagagatccatgttgagctcctcaaatcttgcacgagtaatgggggagta |
39985554 |
T |
|
| Q |
510 |
aaagtcaataccctcaaacaatgaatcaatttcaatggtggtttgagcagtagaggaaagggtcctcttagctctctcgcaagcagttctcaatcttcta |
609 |
Q |
| |
|
|| ||||| || ||||| | |||||||||||||||||||| || |||||||| || || || ||||| ||||| || |||||||| ||||| || ||| |
|
|
| T |
39985555 |
gaaatcaattccttcaaaaagagaatcaatttcaatggtggtctgggcagtagaagagagagttctcttcgctctttcacaagcagtcctcaacctccta |
39985654 |
T |
|
| Q |
610 |
agagcccttggatttccactaatatccttcttattcttcctcttgaattcttgaacaaaatggttcaccatcctgttatcaaaatcttcacctcccaaat |
709 |
Q |
| |
|
||||| || || || ||||| || |||||||| ||||| |||||||| ||||||||||| ||||||||||| ||||| |||||||| |||||||| | || |
|
|
| T |
39985655 |
agagctctggggttgccactgatgtccttcttgttctttctcttgaactcttgaacaaagtggttcaccattctgttgtcaaaatcctcacctccaagat |
39985754 |
T |
|
| Q |
710 |
gtgtatcaccagctgtagctttcacctcaaagataccttcttcaatagtaagtagtgaaacatcaaaagttccaccaccaag |
791 |
Q |
| |
|
| || || || ||||| |||||||||||||||||||| ||||||||||| || | || ||||||||||| ||||||||||| |
|
|
| T |
39985755 |
gggtgtctccggctgtggctttcacctcaaagataccctcttcaatagttagcaaagagacatcaaaagtaccaccaccaag |
39985836 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 255 - 394
Target Start/End: Original strand, 17259895 - 17260034
Alignment:
| Q |
255 |
agcagcttggactgcagcgccataagcaacagcctcatcagggttgatgctcttacaaagttccttcccattgaagaaatcttgcaaaagttgttgaacc |
354 |
Q |
| |
|
|||||| || || ||||| ||||||||||||||||||||||||||||||||||| || | |||||| || ||||||||||| ||||| ||||| || || |
|
|
| T |
17259895 |
agcagcctgaacagcagcaccataagcaacagcctcatcagggttgatgctcttgcataattccttacccttgaagaaatcctgcaatagttgctgcact |
17259994 |
T |
|
| Q |
355 |
ttgggaatcctagtggatccaccaacaagaacaacgtcat |
394 |
Q |
| |
|
|| |||||||||| |||||||||||||| ||||| |||| |
|
|
| T |
17259995 |
ttcggaatcctagaagatccaccaacaaggacaacatcat |
17260034 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 255 - 422
Target Start/End: Original strand, 8575980 - 8576147
Alignment:
| Q |
255 |
agcagcttggactgcagcgccataagcaacagcctcatcagggttgatgctcttacaaagttccttcccattgaagaaatcttgcaaaagttgttgaacc |
354 |
Q |
| |
|
|||||||||||| |||| |||||||||||||||||||||||||||||||||||||| | ||||||||| ||||| | || || || || ||| || |
|
|
| T |
8575980 |
agcagcttggacaacagcaccataagcaacagcctcatcagggttgatgctcttacataattccttccccttgaaaacctcctgtaatagctgtctcact |
8576079 |
T |
|
| Q |
355 |
ttgggaatcctagtggatccaccaacaagaacaacgtcatggacactgttcttatccatcttagcatc |
422 |
Q |
| |
|
|| |||||||||| || ||||||||||| ||||| |||| ||||| ||||| |||||||||||||| |
|
|
| T |
8576080 |
ttaggaatcctagaagaaccaccaacaaggacaacatcatctacactattcttgtccatcttagcatc |
8576147 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 255 - 454
Target Start/End: Original strand, 17267593 - 17267792
Alignment:
| Q |
255 |
agcagcttggactgcagcgccataagcaacagcctcatcagggttgatgctcttacaaagttccttcccattgaagaaatcttgcaaaagttgttgaacc |
354 |
Q |
| |
|
|||||| || || ||||| ||||||||||||||||||||||||||||| || || || | ||||||||| |||||||| | ||||| ||||| || || |
|
|
| T |
17267593 |
agcagcctgaacagcagcaccataagcaacagcctcatcagggttgatacttttgcataattccttccccttgaagaagttctgcaatagttgctgcact |
17267692 |
T |
|
| Q |
355 |
ttgggaatcctagtggatccaccaacaagaacaacgtcatggacactgttcttatccatcttagcatccctcaagcacttctcaacaggctccatacact |
454 |
Q |
| |
|
|| |||||||||| || ||||||||||| ||||| |||| || ||| |||| || ||||||||||| || | |||||||||||| |||||| |||| |
|
|
| T |
17267693 |
ttcggaatcctagaagacccaccaacaaggacaacatcatcaactctgctcttgtcaatcttagcatcactaagacacttctcaacaatctccatgcact |
17267792 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 256 - 394
Target Start/End: Complemental strand, 8636856 - 8636718
Alignment:
| Q |
256 |
gcagcttggactgcagcgccataagcaacagcctcatcagggttgatgctcttacaaagttccttcccattgaagaaatcttgcaaaagttgttgaacct |
355 |
Q |
| |
|
||||| |||||||| || |||||||||||||||||||||| ||||||||||||||| ||||||||| | || || | || || || ||||| || |||| |
|
|
| T |
8636856 |
gcagcctggactgctgctccataagcaacagcctcatcagcgttgatgctcttacacagttccttcgccttaaaaatgtcctgtaatagttgctgcacct |
8636757 |
T |
|
| Q |
356 |
tgggaatcctagtggatccaccaacaagaacaacgtcat |
394 |
Q |
| |
|
| |||||||||| ||| ||||||||||| ||||| |||| |
|
|
| T |
8636756 |
ttggaatcctagaggagccaccaacaaggacaacatcat |
8636718 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 255 - 421
Target Start/End: Original strand, 8590292 - 8590458
Alignment:
| Q |
255 |
agcagcttggactgcagcgccataagcaacagcctcatcagggttgatgctcttacaaagttccttcccattgaagaaatcttgcaaaagttgttgaacc |
354 |
Q |
| |
|
||||||||| || || || |||||||||||||||||||| || |||||||| || |||| |||||||| | || || |||||||| || || || || |
|
|
| T |
8590292 |
agcagcttgaacagctgcaccataagcaacagcctcatctggattgatgctattgtaaagatccttccccataaaaaagtcttgcaatagctgctgcact |
8590391 |
T |
|
| Q |
355 |
ttgggaatcctagtggatccaccaacaagaacaacgtcatggacactgttcttatccatcttagcat |
421 |
Q |
| |
|
||||||||||||| || ||||||||||| ||||| |||| ||| ||||||| ||||||||||||| |
|
|
| T |
8590392 |
ttgggaatcctagaagaaccaccaacaagtacaacatcatctacaatgttcttgtccatcttagcat |
8590458 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 565 - 704
Target Start/End: Complemental strand, 8383080 - 8382941
Alignment:
| Q |
565 |
gaaagggtcctcttagctctctcgcaagcagttctcaatcttctaagagcccttggatttccactaatatccttcttattcttcctcttgaattcttgaa |
664 |
Q |
| |
|
||||| ||||| || || ||||||||||| ||||| || |||||||||||| |||| || |||||||| ||||| |||| |||||||||||| || | || |
|
|
| T |
8383080 |
gaaagtgtcctttttgccctctcgcaagccgttcttaaccttctaagagcctttgggttcccactaatgtccttattatgcttcctcttgaactcgtcaa |
8382981 |
T |
|
| Q |
665 |
caaaatggttcaccatcctgttatcaaaatcttcacctcc |
704 |
Q |
| |
|
|||| | ||||| || |||||||| || ||||||||||| |
|
|
| T |
8382980 |
caaagtacttcacgattctgttatctaagtcttcacctcc |
8382941 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 255 - 394
Target Start/End: Original strand, 8609571 - 8609710
Alignment:
| Q |
255 |
agcagcttggactgcagcgccataagcaacagcctcatcagggttgatgctcttacaaagttccttcccattgaagaaatcttgcaaaagttgttgaacc |
354 |
Q |
| |
|
|||||| ||||| ||||| ||||||||||| ||||||||||||||||||||| |||| | ||||| |||||||| || ||||||| || || | || |
|
|
| T |
8609571 |
agcagcctggacagcagcaccataagcaaccgcctcatcagggttgatgctcatacacaaatcctttccattgaaaaagtcttgcagtagctgcttcact |
8609670 |
T |
|
| Q |
355 |
ttgggaatcctagtggatccaccaacaagaacaacgtcat |
394 |
Q |
| |
|
|| |||||||||| || || |||||||||||||| |||| |
|
|
| T |
8609671 |
ttcggaatcctagaagaacctccaacaagaacaacatcat |
8609710 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 245 - 419
Target Start/End: Original strand, 6789156 - 6789330
Alignment:
| Q |
245 |
cgctcaaaatagcagcttggactgcagcgccataagcaacagcctcatcagggttgatgctcttacaaagttccttcccattgaagaaatcttgcaaaag |
344 |
Q |
| |
|
||||||| | |||||| ||||| || || || |||||||||||||||||||||||||||||| | || | ||||| || |||| | |||||||| || |
|
|
| T |
6789156 |
cgctcaacaaagcagcctggacagctgcaccgtaagcaacagcctcatcagggttgatgctcatgcacaaatcctttcccatgaaaacttcttgcaatag |
6789255 |
T |
|
| Q |
345 |
ttgttgaaccttgggaatcctagtggatccaccaacaagaacaacgtcatggacactgttcttatccatcttagc |
419 |
Q |
| |
|
|||||| || |||||||| |||| || ||||||||||| ||||| |||| ||| | |||| ||||||||||| |
|
|
| T |
6789256 |
ttgttgcactttgggaattctagaagacccaccaacaaggacaacatcatttacaatactcttgtccatcttagc |
6789330 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 274 - 422
Target Start/End: Complemental strand, 7878228 - 7878080
Alignment:
| Q |
274 |
ccataagcaacagcctcatcagggttgatgctcttacaaagttccttcccattgaagaaatcttgcaaaagttgttgaaccttgggaatcctagtggatc |
373 |
Q |
| |
|
|||||||||||||| ||||| ||||||||||| | |||| |||||||| || || || || ||||| || || || || ||| ||||||||| |||| |
|
|
| T |
7878228 |
ccataagcaacagcttcatccgggttgatgctactgcaaatatccttccccttaaaaaagtcctgcaatagctgctgcactttgagaatcctagatgatc |
7878129 |
T |
|
| Q |
374 |
caccaacaagaacaacgtcatggacactgttcttatccatcttagcatc |
422 |
Q |
| |
|
|||||||||| ||||| |||| ||| ||||||| |||||| ||||||| |
|
|
| T |
7878128 |
caccaacaagtacaacatcatctacattgttcttgtccatcatagcatc |
7878080 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 244 - 323
Target Start/End: Original strand, 8537679 - 8537758
Alignment:
| Q |
244 |
ccgctcaaaatagcagcttggactgcagcgccataagcaacagcctcatcagggttgatgctcttacaaagttccttccc |
323 |
Q |
| |
|
|||||||| | |||||| ||||| ||||| |||||||||||||| ||||||||||||||||| ||| ||| |||||||| |
|
|
| T |
8537679 |
ccgctcaacaaagcagcctggacagcagcaccataagcaacagcttcatcagggttgatgcttttaaaaatatccttccc |
8537758 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 268 - 323
Target Start/End: Original strand, 8581367 - 8581422
Alignment:
| Q |
268 |
gcagcgccataagcaacagcctcatcagggttgatgctcttacaaagttccttccc |
323 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||||| || | ||||||||| |
|
|
| T |
8581367 |
gcagcaccataagcaacagcctcatcagggttgatgctcttgcataattccttccc |
8581422 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 271 - 397
Target Start/End: Original strand, 8646547 - 8646673
Alignment:
| Q |
271 |
gcgccataagcaacagcctcatcagggttgatgctcttacaaagttccttcccattgaagaaatcttgcaaaagttgttgaaccttgggaatcctagtgg |
370 |
Q |
| |
|
|||||||||||||| ||| |||||||||||||||||| || | ||||||| ||||||| || || | || | ||||| || || ||||| |||| || |
|
|
| T |
8646547 |
gcgccataagcaacggccacatcagggttgatgctctcgcataattccttctcattgaaaaactccttcagcatctgttgtacttttggaattctagagg |
8646646 |
T |
|
| Q |
371 |
atccaccaacaagaacaacgtcatgga |
397 |
Q |
| |
|
| ||||||||||||||||| ||||||| |
|
|
| T |
8646647 |
agccaccaacaagaacaacatcatgga |
8646673 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 565 - 706
Target Start/End: Original strand, 8581664 - 8581805
Alignment:
| Q |
565 |
gaaagggtcctcttagctctctcgcaagcagttctcaatcttctaagagcccttggatttccactaatatccttcttattcttcctcttgaattcttgaa |
664 |
Q |
| |
|
||||| ||||| || |||||||| |||||||| ||||| ||||||| || ||||||||||| |||| |||| |||| || |||||||| || | |
|
|
| T |
8581664 |
gaaagtgtccttttcgctctctcacaagcagtcctcaaccttctaatggcttttggatttccaataatctcctctttatgttttctcttgaactccgaca |
8581763 |
T |
|
| Q |
665 |
caaaatggttcaccatcctgttatcaaaatcttcacctccca |
706 |
Q |
| |
|
|||| || |||||||| ||||||||||||||||| ||||||| |
|
|
| T |
8581764 |
caaagtgattcaccattctgttatcaaaatcttcccctccca |
8581805 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 274 - 367
Target Start/End: Complemental strand, 29582336 - 29582243
Alignment:
| Q |
274 |
ccataagcaacagcctcatcagggttgatgctcttacaaagttccttcccattgaagaaatcttgcaaaagttgttgaaccttgggaatcctag |
367 |
Q |
| |
|
||||||||||||||||||||||||||||||||| | || | |||||||| ||||| || |||||||| || || || || |||||||| |||| |
|
|
| T |
29582336 |
ccataagcaacagcctcatcagggttgatgctcatgcacaaatccttccccttgaaaaattcttgcaatagctgatgcactttgggaattctag |
29582243 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 255 - 455
Target Start/End: Complemental strand, 8383390 - 8383190
Alignment:
| Q |
255 |
agcagcttggactgcagcgccataagcaacagcctcatcagggttgatgctcttacaaagttccttcccattgaagaaatcttgcaaaagttgttgaacc |
354 |
Q |
| |
|
|||||||| ||||| || ||||||||||||||||| ||||| || |||||| |||||| ||||||| |||||| || | |||||| || | ||| || |
|
|
| T |
8383390 |
agcagctttaactgctgcaccataagcaacagcctcgtcaggatttatgctcacacaaaggtccttccaattgaaaaagtgttgcaatagctcttgcact |
8383291 |
T |
|
| Q |
355 |
ttgggaatcctagtggatccaccaacaagaacaacgtcatggacactgttcttatccatcttagcatccctcaagcacttctcaacaggctccatacact |
454 |
Q |
| |
|
||||||||||| | || ||||| | |||||||| |||| ||||| |||| | |||||||||||| | | || ||||||||| ||||||||||| |
|
|
| T |
8383290 |
ttgggaatcctcgaagaaccaccgatgagaacaacatcatctacactactcttgttcatcttagcatcagtaagacagctctcaacagtctccatacact |
8383191 |
T |
|
| Q |
455 |
t |
455 |
Q |
| |
|
| |
|
|
| T |
8383190 |
t |
8383190 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 255 - 323
Target Start/End: Original strand, 8545287 - 8545355
Alignment:
| Q |
255 |
agcagcttggactgcagcgccataagcaacagcctcatcagggttgatgctcttacaaagttccttccc |
323 |
Q |
| |
|
|||||| ||||| || || |||||||||||||||||||||||||| |||||||| || | ||||||||| |
|
|
| T |
8545287 |
agcagcctggacagctgcaccataagcaacagcctcatcagggttaatgctcttgcataattccttccc |
8545355 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 255 - 367
Target Start/End: Original strand, 8601628 - 8601740
Alignment:
| Q |
255 |
agcagcttggactgcagcgccataagcaacagcctcatcagggttgatgctcttacaaagttccttcccattgaagaaatcttgcaaaagttgttgaacc |
354 |
Q |
| |
|
||||||||| ||||| |||||||| ||||| ||||||||||| ||||||||| |||| ||||||| |||||| || |||| || | |||||| || |
|
|
| T |
8601628 |
agcagcttgaactgctgcgccataggcaactgcctcatcaggattgatgctcacgcaaatgtccttccaattgaaaaattctttcagtaattgttgcact |
8601727 |
T |
|
| Q |
355 |
ttgggaatcctag |
367 |
Q |
| |
|
||||||||||||| |
|
|
| T |
8601728 |
ttgggaatcctag |
8601740 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 247 - 388
Target Start/End: Complemental strand, 10494896 - 10494755
Alignment:
| Q |
247 |
ctcaaaatagcagcttggactgcagcgccataagcaacagcctcatcagggttgatgctcttacaaagttccttcccattgaagaaatcttgcaaaagtt |
346 |
Q |
| |
|
|||||||||||||| || || || || |||||||||||||||||||| |||||||| | | | | | ||||||||| ||||| || ||| |||| || | |
|
|
| T |
10494896 |
ctcaaaatagcagcctgaacagctgcaccataagcaacagcctcatctgggttgatacgcatgaataattccttccccttgaaaaattctagcaatagat |
10494797 |
T |
|
| Q |
347 |
gttgaaccttgggaatcctagtggatccaccaacaagaacaa |
388 |
Q |
| |
|
|| || ||||||||||||| || ||||| |||||||||| |
|
|
| T |
10494796 |
cctgcactttgggaatcctagacgagccacccacaagaacaa |
10494755 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 255 - 311
Target Start/End: Original strand, 3146918 - 3146974
Alignment:
| Q |
255 |
agcagcttggactgcagcgccataagcaacagcctcatcagggttgatgctcttaca |
311 |
Q |
| |
|
||||||||| || || || ||||||||||| |||||||||||||||||||| ||||| |
|
|
| T |
3146918 |
agcagcttgcacagctgcaccataagcaacggcctcatcagggttgatgctgttaca |
3146974 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 247 - 302
Target Start/End: Original strand, 8654096 - 8654151
Alignment:
| Q |
247 |
ctcaaaatagcagcttggactgcagcgccataagcaacagcctcatcagggttgat |
302 |
Q |
| |
|
|||||||||||||| || || ||||||||||| |||| ||||||||| |||||||| |
|
|
| T |
8654096 |
ctcaaaatagcagcctgaacagcagcgccatatgcaatagcctcatctgggttgat |
8654151 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 247 - 302
Target Start/End: Complemental strand, 13333890 - 13333835
Alignment:
| Q |
247 |
ctcaaaatagcagcttggactgcagcgccataagcaacagcctcatcagggttgat |
302 |
Q |
| |
|
|||||||||||||| || || || || |||||||||||||||||||| |||||||| |
|
|
| T |
13333890 |
ctcaaaatagcagcctgaacagctgcaccataagcaacagcctcatctgggttgat |
13333835 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 278 - 308
Target Start/End: Complemental strand, 27846597 - 27846567
Alignment:
| Q |
278 |
aagcaacagcctcatcagggttgatgctctt |
308 |
Q |
| |
|
||||||||||||||||||||||||||||||| |
|
|
| T |
27846597 |
aagcaacagcctcatcagggttgatgctctt |
27846567 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 571 - 692
Target Start/End: Complemental strand, 7877931 - 7877810
Alignment:
| Q |
571 |
gtcctcttagctctctcgcaagcagttctcaatcttctaagagcccttggatttccactaatatccttcttattcttcctcttgaattcttgaacaaaat |
670 |
Q |
| |
|
||||| ||||| ||||| || ||||||||||| || ||||| ||||| || ||||||| ||| ||| |||||||||||||| || || || |||| |
|
|
| T |
7877931 |
gtccttttagccctctcacatgcagttctcaacctcctaagggccctcgggtttccaccaatgtccactttattcttcctcttaaactccatcactaaat |
7877832 |
T |
|
| Q |
671 |
ggttcaccatcctgttatcaaa |
692 |
Q |
| |
|
|||||| ||| ||||||||||| |
|
|
| T |
7877831 |
ggttcaacattctgttatcaaa |
7877810 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 123; Significance: 9e-63; HSPs: 14)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 123; E-Value: 9e-63
Query Start/End: Original strand, 265 - 791
Target Start/End: Complemental strand, 17717191 - 17716665
Alignment:
| Q |
265 |
actgcagcgccataagcaacagcctcatcagggttgatgctcttacaaagttccttcccattgaagaaatcttgcaaaagttgttgaaccttgggaatcc |
364 |
Q |
| |
|
||||| || ||||| |||||||||||||| || || |||||||| || || ||||| | || |||||||| ||||| |||||||||||||| ||||| | |
|
|
| T |
17717191 |
actgccgcaccatatgcaacagcctcatcgggattaatgctcttgcatagctcctttctgttaaagaaatcctgcaatagttgttgaacctttggaattc |
17717092 |
T |
|
| Q |
365 |
tagtggatccaccaacaagaacaacgtcatggacactgttcttatccatcttagcatccctcaagcacttctcaacaggctccatacacttcctaaacag |
464 |
Q |
| |
|
| || || || || ||||| ||||| ||||||||||| || | |||| ||||| ||||| || |||||||| |||||||||| | ||| || || |
|
|
| T |
17717091 |
tggtagaacctcctacaaggacaacatcatggacacttcctttgtacatcccagcatggctcaaacatttctcaacttgctccatacattccctgaagag |
17716992 |
T |
|
| Q |
465 |
atccatgttgagctcttcaaaacgagcacgagtgatggtagtgtaaaagtcaataccctcaaacaatgaatcaatttcaatggtggtttgagcagtagag |
564 |
Q |
| |
|
||||| ||||||||||||||| | |||||||| |||| || || || ||||| |||||||| | ||||||||||||||||||| || |||||||| |
|
|
| T |
17716991 |
atccaagttgagctcttcaaatctggcacgagtaatgggggtatagaaatcaattccctcaaatagacaatcaatttcaatggtggtctgggcagtagat |
17716892 |
T |
|
| Q |
565 |
gaaagggtcctcttagctctctcgcaagcagttctcaatcttctaagagcccttggatttccactaatatccttcttattcttcctcttgaattcttgaa |
664 |
Q |
| |
|
|| || | ||||| || ||||| |||||||| ||||| || ||||||| ||||| || |||||||| |||||||| ||||| |||||||| ||| ||| |
|
|
| T |
17716891 |
gatagagctctcttcgccctctcacaagcagtcctcaacctcataagagctcttgggttgccactaatgtccttcttgttctttctcttgaactctcgaa |
17716792 |
T |
|
| Q |
665 |
caaaatggttcaccatcctgttatcaaaatcttcacctcccaaatgtgtatcaccagctgtagctttcacctcaaagataccttcttcaatagtaagtag |
764 |
Q |
| |
|
|||| ||||||||||| ||||||| |||||| |||||||| | ||| | || || ||||||||||| |||| |||| ||| ||||||||||| || | |
|
|
| T |
17716791 |
caaagtggttcaccattctgttattaaaatcctcacctccaagatgggcgtctccggctgtagctttaacctgaaagttacactcttcaatagttagcaa |
17716692 |
T |
|
| Q |
765 |
tgaaacatcaaaagttccaccaccaag |
791 |
Q |
| |
|
|| ||||||||||| ||||||||||| |
|
|
| T |
17716691 |
agagacatcaaaagtaccaccaccaag |
17716665 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 108; E-Value: 8e-54
Query Start/End: Original strand, 265 - 704
Target Start/End: Complemental strand, 17648545 - 17648106
Alignment:
| Q |
265 |
actgcagcgccataagcaacagcctcatcagggttgatgctcttacaaagttccttcccattgaagaaatcttgcaaaagttgttgaaccttgggaatcc |
364 |
Q |
| |
|
|||||||| ||||| |||||||||||||| || || ||||| || || || ||||| || | |||||||| ||||| |||||||||||||| ||||| | |
|
|
| T |
17648545 |
actgcagcaccatatgcaacagcctcatcgggattaatgctattgcatagctcctttccgtcaaagaaatcctgcaatagttgttgaacctttggaattc |
17648446 |
T |
|
| Q |
365 |
tagtggatccaccaacaagaacaacgtcatggacactgttcttatccatcttagcatccctcaagcacttctcaacaggctccatacacttcctaaacag |
464 |
Q |
| |
|
| || || || || ||||| |||| ||||||||||| || || |||||| ||||||| ||||| || ||||||| |||||||||| |||||||| || |
|
|
| T |
17648445 |
ttgtagaaccgcctacaaggacaatatcatggacactttttttgtccatcctagcatctctcaaacatatctcaacttgctccatacatttcctaaagag |
17648346 |
T |
|
| Q |
465 |
atccatgttgagctcttcaaaacgagcacgagtgatggtagtgtaaaagtcaataccctcaaacaatgaatcaatttcaatggtggtttgagcagtagag |
564 |
Q |
| |
|
||||||||||||||| ||||| | |||||||| |||| | | | || ||||| ||||| || | |||||||||||||||||||||| |||| | |
|
|
| T |
17648345 |
atccatgttgagctcctcaaatcttgcacgagtaatggaggagcagaaatcaattccctcgaatagacaatcaatttcaatggtggtttggagagtaaat |
17648246 |
T |
|
| Q |
565 |
gaaagggtcctcttagctctctcgcaagcagttctcaatcttctaagagcccttggatttccactaatatccttcttattcttcctcttgaattcttgaa |
664 |
Q |
| |
|
|| || || ||||| || |||| |||||||| ||||| || ||||||| ||||| || |||||||| |||||||| ||||| |||||||| |||||| |
|
|
| T |
17648245 |
gatagagttctcttggccttctcacaagcagtcctcaacctcataagagctcttgggttgccactaatgtccttcttgttctttctcttgaacacttgaa |
17648146 |
T |
|
| Q |
665 |
caaaatggttcaccatcctgttatcaaaatcttcacctcc |
704 |
Q |
| |
|
|||| || |||||||| ||||||| |||||| |||||||| |
|
|
| T |
17648145 |
caaagtgattcaccattctgttattaaaatcctcacctcc |
17648106 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 105; E-Value: 5e-52
Query Start/End: Original strand, 265 - 791
Target Start/End: Complemental strand, 17718455 - 17717926
Alignment:
| Q |
265 |
actgcagcgccataagcaacagcctcatcagggttgatgctcttacaaagttccttcccattgaagaaatcttgcaaaagttgttgaaccttgggaatcc |
364 |
Q |
| |
|
|||||||| ||||| |||||||||||||| || || |||||||| || || ||||| || || |||| ||| ||| | |||||||||||||| ||||| |
|
|
| T |
17718455 |
actgcagcaccatatgcaacagcctcatcgggattaatgctcttgcatagatcctttccgttaaagacatcctgccatagttgttgaacctttggaattt |
17718356 |
T |
|
| Q |
365 |
tagtggatccaccaacaagaacaacgtcatggacactgttcttatccatcttagcatccctcaagcacttctcaacaggctccatacacttcctaaacag |
464 |
Q |
| |
|
| || || || || ||||| ||||| ||||||||||| || | |||| |||| ||||| || |||||||| |||||||||| | ||| || || |
|
|
| T |
17718355 |
tggtagaacctcctacaaggacaacatcatggacacttcctttgttcatcccagcacgtctcaaacatttctcaacttgctccatacattccctgaagag |
17718256 |
T |
|
| Q |
465 |
atccatgttgagctcttcaaaacgagcacgagtgatggtagtgtaaaagtcaataccctcaaacaatgaatcaatttcaatggtggtttgagcagtagag |
564 |
Q |
| |
|
||||| ||||||||||||||| | |||||||| |||| || || || ||||| |||||||| | ||||||||||||||||||| || | |||||| |
|
|
| T |
17718255 |
atccaagttgagctcttcaaatctggcacgagtaatgggggtatagaaatcaattccctcaaatagacaatcaatttcaatggtggtctgggaagtagat |
17718156 |
T |
|
| Q |
565 |
gaaagggtcctcttagctctctcgcaagcagttctcaatcttc-taagagcccttggatttccactaatatccttcttattcttcctcttgaattcttga |
663 |
Q |
| |
|
|| || | ||||| || ||||| |||||||| ||||| |||| ||||||| ||||| || |||||||| |||||||| ||||| |||||||| |||||| |
|
|
| T |
17718155 |
gatagagctctcttcgccctctcacaagcagtcctcaa-cttcataagagctcttgggttgccactaatgtccttcttgttctttctcttgaactcttga |
17718057 |
T |
|
| Q |
664 |
acaaaatggttcaccatcctgttatcaaaatcttcacctcccaaatgtgtatcaccagctgtagctttcacctcaaagataccttcttcaatagta---a |
760 |
Q |
| |
|
||||| ||||||||||| ||||||| |||||| |||||||| | ||| | || || ||||||||||| |||| |||| ||| |||||||||||| | |
|
|
| T |
17718056 |
acaaagtggttcaccattctgttattaaaatcctcacctccaagatgggcgtctccggctgtagctttaacctgaaagttacactcttcaatagtagtta |
17717957 |
T |
|
| Q |
761 |
gtagtgaaacatcaaaagttccaccaccaag |
791 |
Q |
| |
|
| | || ||||||||||| ||||||||||| |
|
|
| T |
17717956 |
gcaaagagacatcaaaagtaccaccaccaag |
17717926 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 265 - 704
Target Start/End: Complemental strand, 17622449 - 17622010
Alignment:
| Q |
265 |
actgcagcgccataagcaacagcctcatcagggttgatgctcttacaaagttccttcccattgaagaaatcttgcaaaagttgttgaaccttgggaatcc |
364 |
Q |
| |
|
|||||||| ||| | ||||||||||| || || || ||||| || || || ||||| || || |||||||| ||||| | |||||||||||| ||||| | |
|
|
| T |
17622449 |
actgcagcaccacacgcaacagcctcgtcgggattaatgctattgcatagctcctttccgttaaagaaatcctgcaataattgttgaacctttggaattc |
17622350 |
T |
|
| Q |
365 |
tagtggatccaccaacaagaacaacgtcatggacactgttcttatccatcttagcatccctcaagcacttctcaacaggctccatacacttcctaaacag |
464 |
Q |
| |
|
| || || || || ||||| ||||| ||||||||||| | || |||||| |||||| ||||| || |||||||| |||||||||| |||||||| || |
|
|
| T |
17622349 |
tggtagaacctcctacaaggacaacatcatggacacttgttttgtccatcctagcatttctcaaacatttctcaacttgctccatacatttcctaaagag |
17622250 |
T |
|
| Q |
465 |
atccatgttgagctcttcaaaacgagcacgagtgatggtagtgtaaaagtcaataccctcaaacaatgaatcaatttcaatggtggtttgagcagtagag |
564 |
Q |
| |
|
|||||||||||||| |||||| |||||||| |||| | | | || ||||| ||||| || | |||||||||||||||||||||| ||||| | |
|
|
| T |
17622249 |
atccatgttgagcttttcaaatgtggcacgagtaatgggggagcagaaatcaattccctcgaatagacaatcaatttcaatggtggtttggacagtaaat |
17622150 |
T |
|
| Q |
565 |
gaaagggtcctcttagctctctcgcaagcagttctcaatcttctaagagcccttggatttccactaatatccttcttattcttcctcttgaattcttgaa |
664 |
Q |
| |
|
|| || || ||||| || |||| |||||||| ||||| || ||||||| ||||| || ||||| || |||||||| ||||| |||||||| ||||||| |
|
|
| T |
17622149 |
gatagagttctcttggccttctcacaagcagtcctcaacctcataagagctcttgggttgccactgatgtccttcttgttctttctcttgaactcttgaa |
17622050 |
T |
|
| Q |
665 |
caaaatggttcaccatcctgttatcaaaatcttcacctcc |
704 |
Q |
| |
|
|||| ||||||||||| ||||||| |||||| |||||||| |
|
|
| T |
17622049 |
caaagtggttcaccattctgttattaaaatcctcacctcc |
17622010 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 267 - 758
Target Start/End: Complemental strand, 17667185 - 17666694
Alignment:
| Q |
267 |
tgcagcgccataagcaacagcctcatcagggttgatgctcttacaaagttccttcccattgaagaaatcttgcaaaagttgttgaaccttgggaatccta |
366 |
Q |
| |
|
|||||| ||||| |||||||||| | || || ||||| || || || ||||| || || |||||||| ||||| | |||||||||||| ||||| || |
|
|
| T |
17667185 |
tgcagcaccatacacaacagcctcgttgggattaatgctattgcatagctcctttccgttaaagaaatcctgcaataattgttgaacctttggaattctg |
17667086 |
T |
|
| Q |
367 |
gtggatccaccaacaagaacaacgtcatggacactgttcttatccatcttagcatccctcaagcacttctcaacaggctccatacacttcctaaacagat |
466 |
Q |
| |
|
|| || || || ||||| ||||| ||||||||||| | || ||||||||||||| ||||| || |||||||| |||||||||| |||||||| |||| |
|
|
| T |
17667085 |
gtagaacctcctacaaggacaacatcatggacacttcttttgtccatcttagcatttctcaaacatttctcaacttgctccatacatttcctaaagagat |
17666986 |
T |
|
| Q |
467 |
ccatgttgagctcttcaaaacgagcacgagtgatggtagtgtaaaagtcaataccctcaaacaatgaatcaatttcaatggtggtttgagcagtagagga |
566 |
Q |
| |
|
||||||||||||||||||| |||||||| ||| | | | || ||||| ||||| || | | ||||||||||||||||| ||||||||||| || |
|
|
| T |
17666985 |
ccatgttgagctcttcaaatgtggcacgagtaatgaaggagcagaaatcaattccctcgaatagacattcaatttcaatggtggtctgagcagtagatga |
17666886 |
T |
|
| Q |
567 |
aagggtcctcttagctctctcgcaagcagttctcaatcttctaagagcccttggatttccactaatatccttcttattcttcctcttgaattcttgaaca |
666 |
Q |
| |
|
|| | ||||| || ||||| |||||||| | ||| || ||||||| ||||| || ||||| || ||||| || ||||| || ||||| ||||||||| |
|
|
| T |
17666885 |
tagagctctcttcgccctctcacaagcagtccccaacctcataagagctcttgggttgccactgatgtccttgttgttctttcttttgaactcttgaaca |
17666786 |
T |
|
| Q |
667 |
aaatggttcaccatcctgttatcaaaatcttcacctcccaaatgtgtatcaccagctgtagctttcacctcaaagataccttcttcaatagt |
758 |
Q |
| |
|
|| || |||||||| ||||||| |||||| |||||||| | ||| | || || | ||||||||| ||| ||| |||||| ||||||||||| |
|
|
| T |
17666785 |
aagtgattcaccattctgttattaaaatcctcacctccaagatgggggtctccggttgtagctttaaccccaatgataccctcttcaatagt |
17666694 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 265 - 485
Target Start/End: Complemental strand, 17706216 - 17705997
Alignment:
| Q |
265 |
actgcagcgccataagcaacagcctcatcagggttgatgctcttacaaagttccttcccattgaagaaatcttgcaaaagttgttgaaccttgggaatcc |
364 |
Q |
| |
|
|||||||| ||||| |||||||||||||| || || ||||| || || || ||||| || | |||||||| |||| | ||| ||||||||| ||||| | |
|
|
| T |
17706216 |
actgcagcaccatatgcaacagcctcatcgggattaatgctattgcatagctcctttccgtcaaagaaatcctgcata-gtttttgaacctttggaattc |
17706118 |
T |
|
| Q |
365 |
tagtggatccaccaacaagaacaacgtcatggacactgttcttatccatcttagcatccctcaagcacttctcaacaggctccatacacttcctaaacag |
464 |
Q |
| |
|
| || || || || ||||| ||||| ||||||||||| || || |||||||||||||| ||||| || |||||||| |||||||||| |||||||| || |
|
|
| T |
17706117 |
tggtagaacctcctacaaggacaacatcatggacactttttttgtccatcttagcatctctcaaacatttctcaacttgctccatacatttcctaaagag |
17706018 |
T |
|
| Q |
465 |
atccatgttgagctcttcaaa |
485 |
Q |
| |
|
||||||||||||||||||||| |
|
|
| T |
17706017 |
atccatgttgagctcttcaaa |
17705997 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 328 - 704
Target Start/End: Complemental strand, 17704496 - 17704120
Alignment:
| Q |
328 |
aagaaatcttgcaaaagttgttgaaccttgggaatcctagtggatccaccaacaagaacaacgtcatggacactgttcttatccatcttagcatccctca |
427 |
Q |
| |
|
|||||||| ||||| |||||||||||||| ||||| || || || || || ||||| ||||| ||||||||||| | || |||||| ||||| |||| |
|
|
| T |
17704496 |
aagaaatcctgcaatagttgttgaacctttggaattctggtagaacctcctacaaggacaacatcatggacacttgttttgtccatcctagcaaatctca |
17704397 |
T |
|
| Q |
428 |
agcacttctcaacaggctccatacacttcctaaacagatccatgttgagctcttcaaaacgagcacgagtgatggtagtgtaaaagtcaataccctcaaa |
527 |
Q |
| |
|
| ||||| |||| ||||||||| ||| |||| ||||||||||||||||||||||| | |||||||| ||| | ||| | || || || |||| || |
|
|
| T |
17704396 |
aaagtttctcgacagtctccatacatttcataaagagatccatgttgagctcttcaaatctggcacgagtaatgatggtgaagaaatccattcccttgaa |
17704297 |
T |
|
| Q |
528 |
caatgaatcaatttcaatggtggtttgagcagtagaggaaagggtcctcttagctctctcgcaagcagttctcaatcttctaagagcccttggatttcca |
627 |
Q |
| |
|
|| || ||||||||||||||||||| |||| | || || || ||||| || |||| |||||||| ||||| || ||||||| ||| | | ||| |
|
|
| T |
17704296 |
taaacaaacaatttcaatggtggtttggagagtaaatgatagagttctcttggccttctcacaagcagtcctcaacctcataagagctctttggtcgcca |
17704197 |
T |
|
| Q |
628 |
ctaatatccttcttattcttcctcttgaattcttgaacaaaatggttcaccatcctgttatcaaaatcttcacctcc |
704 |
Q |
| |
|
|| || |||||| | ||||| |||||||| ||||||||||| | ||||||||| ||||||| |||||| |||||||| |
|
|
| T |
17704196 |
ctgatgtccttcctgttctttctcttgaactcttgaacaaagtagttcaccattctgttattaaaatcctcacctcc |
17704120 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 255 - 388
Target Start/End: Complemental strand, 12245920 - 12245787
Alignment:
| Q |
255 |
agcagcttggactgcagcgccataagcaacagcctcatcagggttgatgctcttacaaagttccttcccattgaagaaatcttgcaaaagttgttgaacc |
354 |
Q |
| |
|
||||||||| || || || ||||||||||||||||| |||||||| |||||||| || | ||||||||| ||||| || || || || || ||||| || |
|
|
| T |
12245920 |
agcagcttgaacagctgccccataagcaacagcctcgtcagggttaatgctcttgcacaattccttcccgttgaaaaagtcctgtaatagctgttggact |
12245821 |
T |
|
| Q |
355 |
ttgggaatcctagtggatccaccaacaagaacaa |
388 |
Q |
| |
|
||||||||||||| |||||||||||||| |||| |
|
|
| T |
12245820 |
ttgggaatcctagaagatccaccaacaagtacaa |
12245787 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 608 - 791
Target Start/End: Complemental strand, 17705899 - 17705716
Alignment:
| Q |
608 |
taagagcccttggatttccactaatatccttcttattcttcctcttgaattcttgaacaaaatggttcaccatcctgttatcaaaatcttcacctcccaa |
707 |
Q |
| |
|
||||||| | ||| || |||||||| |||||||| ||||| |||||||| |||| |||||| ||||||||||| ||||||| |||||| |||||||| | |
|
|
| T |
17705899 |
taagagctcatgggttgccactaatgtccttcttcttctttctcttgaactcttaaacaaagtggttcaccattctgttattaaaatcctcacctccaag |
17705800 |
T |
|
| Q |
708 |
atgtgtatcaccagctgtagctttcacctcaaagataccttcttcaatagtaagtagtgaaacatcaaaagttccaccaccaag |
791 |
Q |
| |
|
||| || || || | | ||||||| ||||||| || || ||||||| ||| || | || |||||||||| ||||||||||| |
|
|
| T |
17705799 |
atgggtgtctccggatatagctttaacctcaacgacactctcttcaaaagttagcaaagaggcatcaaaagtcccaccaccaag |
17705716 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 255 - 332
Target Start/End: Complemental strand, 16662506 - 16662429
Alignment:
| Q |
255 |
agcagcttggactgcagcgccataagcaacagcctcatcagggttgatgctcttacaaagttccttcccattgaagaa |
332 |
Q |
| |
|
||||||||| || || || ||||||||||||||||||||||||||||||||||| || | ||||||||||||||||| |
|
|
| T |
16662506 |
agcagcttgcacagctgccccataagcaacagcctcatcagggttgatgctcttgcacaactccttcccattgaagaa |
16662429 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 255 - 394
Target Start/End: Original strand, 11999062 - 11999200
Alignment:
| Q |
255 |
agcagcttggactgcagcgccataagcaacagcctcatcagggttgatgctcttacaaagttccttcccattgaagaaatcttgcaaaagttgttgaacc |
354 |
Q |
| |
|
||||||||| || || || |||||||| ||||||||||||||||| |||||||| || | |||||||| ||||| || || || || || ||||| || |
|
|
| T |
11999062 |
agcagcttgaacagctgccccataagctacagcctcatcagggttaatgctcttgcacaactccttcccgttgaaaaagtcatgtaatagctgttggact |
11999161 |
T |
|
| Q |
355 |
ttgggaatcctagtggatccaccaacaagaacaacgtcat |
394 |
Q |
| |
|
||||| ||||||| |||||||||||||| ||||| |||| |
|
|
| T |
11999162 |
ttggg-atcctagaagatccaccaacaagtacaacatcat |
11999200 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #12
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 247 - 394
Target Start/End: Complemental strand, 16658039 - 16657892
Alignment:
| Q |
247 |
ctcaaaatagcagcttggactgcagcgccataagcaacagcctcatcagggttgatgctcttacaaagttccttcccattgaagaaatcttgcaaaagtt |
346 |
Q |
| |
|
||||||||||||||||| || || || || ||||||||||| ||||| |||||||| || || || | ||||| || ||||| || |||||||| || | |
|
|
| T |
16658039 |
ctcaaaatagcagcttgaacagctgcaccgtaagcaacagcttcatccgggttgatacttttgcataaatccttgcccttgaaaaagtcttgcaatagat |
16657940 |
T |
|
| Q |
347 |
gttgaaccttgggaatcctagtggatccaccaacaagaacaacgtcat |
394 |
Q |
| |
|
|| || ||||||||||||| || ||||| |||||||||||||||| |
|
|
| T |
16657939 |
cctgcactttgggaatcctagatgagccacccacaagaacaacgtcat |
16657892 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #13
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 247 - 305
Target Start/End: Original strand, 43625058 - 43625116
Alignment:
| Q |
247 |
ctcaaaatagcagcttggactgcagcgccataagcaacagcctcatcagggttgatgct |
305 |
Q |
| |
|
|||||||||||||| ||||| || || |||||||||||||||||||||||||| ||||| |
|
|
| T |
43625058 |
ctcaaaatagcagcctggacagctgcaccataagcaacagcctcatcagggtttatgct |
43625116 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 275 - 394
Target Start/End: Original strand, 12234364 - 12234482
Alignment:
| Q |
275 |
cataagcaacagcctcatcagggttgatgctcttacaaagttccttcccattgaagaaatcttgcaaaagttgttgaaccttgggaatcctagtggatcc |
374 |
Q |
| |
|
|||||||||| ||||| |||||||| || ||||| || || |||||||| ||||| ||||| ||||| ||||| || || ||||||||||||| ||| || |
|
|
| T |
12234364 |
cataagcaaccgcctc-tcagggttaatactcttgcacagctccttccccttgaaaaaatcctgcaatagttgctgcactttgggaatcctagaggaccc |
12234462 |
T |
|
| Q |
375 |
accaacaagaacaacgtcat |
394 |
Q |
| |
|
|||| ||| ||||| |||| |
|
|
| T |
12234463 |
gccaataaggacaacttcat |
12234482 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 52; Significance: 2e-20; HSPs: 4)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 255 - 422
Target Start/End: Original strand, 15594688 - 15594855
Alignment:
| Q |
255 |
agcagcttggactgcagcgccataagcaacagcctcatcagggttgatgctcttacaaagttccttcccattgaagaaatcttgcaaaagttgttgaacc |
354 |
Q |
| |
|
|||||| ||||| || || ||||||||||||||||||||||||||||||||| | || | |||||| || | ||| ||||| | ||| |||||||| || |
|
|
| T |
15594688 |
agcagcctggacagctgcaccataagcaacagcctcatcagggttgatgctcatgcacaattcctttccctcgaaaaaatccttcaatagttgttgcact |
15594787 |
T |
|
| Q |
355 |
ttgggaatcctagtggatccaccaacaagaacaacgtcatggacactgttcttatccatcttagcatc |
422 |
Q |
| |
|
||||||||||||| || |||||||||| |||| |||| ||||| |||||| |||||||||||| |
|
|
| T |
15594788 |
ttgggaatcctagaagacccaccaacaatgacaatatcatttacactactcttattcatcttagcatc |
15594855 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 245 - 394
Target Start/End: Complemental strand, 4679081 - 4678932
Alignment:
| Q |
245 |
cgctcaaaatagcagcttggactgcagcgccataagcaacagcctcatcagggttgatgctcttacaaagttccttcccattgaagaaatcttgcaaaag |
344 |
Q |
| |
|
||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| || | ||||||| || || || |||||||| || |
|
|
| T |
4679081 |
cgctcaaaatagcagcttggatagctgcaccataagcaacagcctcatctgggttgatactcttgcacaaatccttccgcttaaaaaagtcttgcaatag |
4678982 |
T |
|
| Q |
345 |
ttgttgaaccttgggaatcctagtggatccaccaacaagaacaacgtcat |
394 |
Q |
| |
|
| || || ||||||||||| | || ||||| ||||||||||| |||| |
|
|
| T |
4678981 |
atcctgcactttgggaatcctcgatgaaccacccacaagaacaacatcat |
4678932 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 255 - 422
Target Start/End: Complemental strand, 34467302 - 34467135
Alignment:
| Q |
255 |
agcagcttggactgcagcgccataagcaacagcctcatcagggttgatgctcttacaaagttccttcccattgaagaaatcttgcaaaagttgttgaacc |
354 |
Q |
| |
|
||||||||| || || ||| ||||||| ||||||||||||||||||||||| || || || ||||| |||||||| || || |||| || || || || |
|
|
| T |
34467302 |
agcagcttgcacagctgcgacataagcgacagcctcatcagggttgatgctattgcatagatccttaccattgaaaaagtcccgcaatagctgctgcact |
34467203 |
T |
|
| Q |
355 |
ttgggaatcctagtggatccaccaacaagaacaacgtcatggacactgttcttatccatcttagcatc |
422 |
Q |
| |
|
||||||||||||| || || || ||||| ||| | ||||| ||||| || | |||||||||||||| |
|
|
| T |
34467202 |
ttgggaatcctagaagagcccccgacaaggacagcatcatgcacactactcgtgtccatcttagcatc |
34467135 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 571 - 656
Target Start/End: Complemental strand, 34466991 - 34466906
Alignment:
| Q |
571 |
gtcctcttagctctctcgcaagcagttctcaatcttctaagagcccttggatttccactaatatccttcttattcttcctcttgaa |
656 |
Q |
| |
|
|||||||| || ||||||| ||||||||||| || || | ||| || || ||||||||||||||||| |||| |||||||||||| |
|
|
| T |
34466991 |
gtcctctttgcattctcgcacgcagttctcaacctcctcaaagctctagggtttccactaatatccttattatgcttcctcttgaa |
34466906 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 3)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 274 - 455
Target Start/End: Original strand, 12528177 - 12528358
Alignment:
| Q |
274 |
ccataagcaacagcctcatcagggttgatgctcttacaaagttccttcccattgaagaaatcttgcaaaagttgttgaaccttgggaatcctagtggatc |
373 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| | | ||||| || ||||| || || ||||| || || | || ||||||||||||| || | |
|
|
| T |
12528177 |
ccataagcaacagcctcatcagggttgatgctcttgtataactccttgcccttgaaaaactcctgcaatagctgcttcactttgggaatcctagacgagc |
12528276 |
T |
|
| Q |
374 |
caccaacaagaacaacgtcatggacactgttcttatccatcttagcatccctcaagcacttctcaacaggctccatacactt |
455 |
Q |
| |
|
|||||||||| |||| |||| ||||| |||| |||||||||||||| |||| || | ||||| | |||||||||||| |
|
|
| T |
12528277 |
caccaacaagtacaatatcatctacactactcttgtccatcttagcatcggtcaaacaactttcaacggtctccatacactt |
12528358 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 279 - 395
Target Start/End: Original strand, 43744494 - 43744610
Alignment:
| Q |
279 |
agcaacagcctcatcagggttgatgctcttacaaagttccttcccattgaagaaatcttgcaaaagttgttgaaccttgggaatcctagtggatccacca |
378 |
Q |
| |
|
|||||| |||||||||||||| ||| ||||||| | |||||||| || || || ||||| |||||||| || || |||||||||| ||| |||||| |
|
|
| T |
43744494 |
agcaactgcctcatcagggttaatgttcttacacaaatccttccctgcaaaaaattcctgcaatagttgttgtacttttggaatcctagaggagccacca |
43744593 |
T |
|
| Q |
379 |
acaagaacaacgtcatg |
395 |
Q |
| |
|
||||||||||| ||||| |
|
|
| T |
43744594 |
acaagaacaacatcatg |
43744610 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 339 - 388
Target Start/End: Complemental strand, 42325230 - 42325181
Alignment:
| Q |
339 |
caaaagttgttgaaccttgggaatcctagtggatccaccaacaagaacaa |
388 |
Q |
| |
|
|||||||||||| ||||| |||||||| ||| ||||||||||||||||| |
|
|
| T |
42325230 |
caaaagttgttgtacctttggaatccttgtgcttccaccaacaagaacaa |
42325181 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 274 - 389
Target Start/End: Original strand, 28219591 - 28219706
Alignment:
| Q |
274 |
ccataagcaacagcctcatcagggttgatgctcttacaaagttccttcccattgaagaaatcttgcaaaagttgttgaaccttgggaatcctagtggatc |
373 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||| | ||||||||| || || || |||| |||||||| || || ||||| |||| ||| | |
|
|
| T |
28219591 |
ccataagcaacagcctcatcagggttaatgctcttacacaattccttccctccaaaaaattcctgcagtagttgttgtacttttggaattctagaggagc |
28219690 |
T |
|
| Q |
374 |
caccaacaagaacaac |
389 |
Q |
| |
|
| |||||||||||||| |
|
|
| T |
28219691 |
ctccaacaagaacaac |
28219706 |
T |
|
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Target: chr6 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 580 - 680
Target Start/End: Original strand, 11209371 - 11209471
Alignment:
| Q |
580 |
gctctctcgcaagcagttctcaatcttctaagagcccttggatttccactaatatccttcttattcttcctcttgaattcttgaacaaaatggttcacca |
679 |
Q |
| |
|
||||||||||||||||| ||| || ||||| || ||||||||||||||||| ||| | || | ||||||| ||| |||| |||||||||||||||| |
|
|
| T |
11209371 |
gctctctcgcaagcagtcttcagcctcctaagggctcttggatttccactaatgtccattttttccttcctcaagaactctttcacaaaatggttcacca |
11209470 |
T |
|
| Q |
680 |
t |
680 |
Q |
| |
|
| |
|
|
| T |
11209471 |
t |
11209471 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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