View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11916_high_8 (Length: 504)

Name: NF11916_high_8
Description: NF11916
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11916_high_8
NF11916_high_8
[»] chr6 (21 HSPs)
chr6 (64-371)||(34883324-34883636)
chr6 (392-499)||(31110759-31110864)
chr6 (397-499)||(17598554-17598656)
chr6 (419-499)||(11427640-11427720)
chr6 (396-499)||(31976247-31976350)
chr6 (388-499)||(23128125-23128236)
chr6 (394-499)||(30341358-30341463)
chr6 (387-499)||(15832567-15832679)
chr6 (395-499)||(15990040-15990144)
chr6 (419-499)||(32869700-32869780)
chr6 (397-499)||(4231548-4231650)
chr6 (397-499)||(15508022-15508124)
chr6 (397-499)||(29857827-29857929)
chr6 (394-499)||(6209463-6209568)
chr6 (402-499)||(22880656-22880753)
chr6 (397-465)||(31109432-31109500)
chr6 (393-499)||(12732478-12732584)
chr6 (396-462)||(22422053-22422119)
chr6 (402-499)||(28536486-28536581)
chr6 (397-499)||(31953028-31953130)
chr6 (16-45)||(34883273-34883302)
[»] chr3 (32 HSPs)
chr3 (391-499)||(11347920-11348028)
chr3 (397-499)||(26141530-26141632)
chr3 (397-499)||(47531865-47531967)
chr3 (395-499)||(27714889-27714993)
chr3 (395-499)||(41189762-41189866)
chr3 (393-499)||(49607410-49607516)
chr3 (396-499)||(17470404-17470507)
chr3 (397-499)||(51419358-51419460)
chr3 (397-499)||(53982011-53982113)
chr3 (419-499)||(26754717-26754797)
chr3 (395-499)||(54868893-54868997)
chr3 (396-499)||(8956761-8956864)
chr3 (420-499)||(31456712-31456791)
chr3 (397-499)||(33644200-33644302)
chr3 (401-499)||(52629304-52629402)
chr3 (395-499)||(11907369-11907473)
chr3 (451-499)||(25407145-25407193)
chr3 (396-499)||(24699952-24700055)
chr3 (396-499)||(35536625-35536728)
chr3 (395-465)||(11095385-11095455)
chr3 (397-499)||(14623837-14623939)
chr3 (397-499)||(20764913-20765015)
chr3 (402-499)||(13898053-13898150)
chr3 (419-499)||(8076415-8076495)
chr3 (427-499)||(9563029-9563101)
chr3 (395-499)||(33118849-33118953)
chr3 (395-471)||(35093583-35093659)
chr3 (419-499)||(36331327-36331407)
chr3 (419-499)||(48587089-48587169)
chr3 (394-465)||(36707456-36707527)
chr3 (409-455)||(32605956-32606002)
chr3 (397-499)||(45058551-45058652)
[»] chr2 (32 HSPs)
chr2 (392-499)||(42257188-42257295)
chr2 (397-499)||(40613900-40614002)
chr2 (395-499)||(9058478-9058582)
chr2 (391-499)||(38273140-38273248)
chr2 (396-499)||(5574486-5574589)
chr2 (396-499)||(33436210-33436313)
chr2 (393-499)||(45097733-45097839)
chr2 (402-499)||(19930818-19930915)
chr2 (395-499)||(10249380-10249484)
chr2 (392-499)||(33436098-33436205)
chr2 (397-499)||(13438343-13438445)
chr2 (397-499)||(17473020-17473122)
chr2 (397-499)||(27864704-27864806)
chr2 (397-499)||(28381653-28381755)
chr2 (402-499)||(28863460-28863557)
chr2 (396-497)||(32505648-32505749)
chr2 (397-497)||(4060685-4060785)
chr2 (396-495)||(2533123-2533221)
chr2 (397-499)||(38732354-38732456)
chr2 (397-499)||(40701478-40701580)
chr2 (402-499)||(41575142-41575240)
chr2 (419-499)||(2997485-2997565)
chr2 (396-499)||(7465733-7465836)
chr2 (392-499)||(20700810-20700917)
chr2 (396-499)||(36168835-36168938)
chr2 (446-499)||(13365402-13365455)
chr2 (395-499)||(30915461-30915565)
chr2 (394-465)||(38882846-38882916)
chr2 (397-495)||(43490121-43490219)
chr2 (397-462)||(17820039-17820104)
chr2 (447-499)||(3034981-3035033)
chr2 (447-499)||(3154193-3154245)
[»] chr5 (24 HSPs)
chr5 (396-499)||(6679697-6679800)
chr5 (397-499)||(28177775-28177877)
chr5 (396-499)||(2740273-2740376)
chr5 (393-499)||(13811648-13811754)
chr5 (397-499)||(26720516-26720618)
chr5 (397-499)||(26990265-26990367)
chr5 (397-499)||(35943890-35943992)
chr5 (397-497)||(14831814-14831914)
chr5 (395-499)||(15409608-15409712)
chr5 (396-499)||(2252166-2252269)
chr5 (393-499)||(18520882-18520988)
chr5 (397-499)||(35785199-35785301)
chr5 (397-499)||(40145407-40145509)
chr5 (394-499)||(3921263-3921368)
chr5 (393-497)||(31008984-31009088)
chr5 (420-495)||(42414304-42414379)
chr5 (397-499)||(33149636-33149738)
chr5 (397-497)||(20073516-20073616)
chr5 (395-499)||(36732940-36733044)
chr5 (420-499)||(39557515-39557594)
chr5 (409-499)||(33825322-33825412)
chr5 (395-499)||(39688895-39688999)
chr5 (396-465)||(41470448-41470517)
chr5 (419-471)||(16327923-16327975)
[»] chr1 (28 HSPs)
chr1 (394-499)||(32813244-32813349)
chr1 (397-499)||(27564733-27564835)
chr1 (396-497)||(51898683-51898784)
chr1 (396-499)||(37926436-37926539)
chr1 (393-499)||(8346386-8346492)
chr1 (395-499)||(49811525-49811629)
chr1 (393-499)||(5958998-5959104)
chr1 (402-499)||(44548374-44548471)
chr1 (392-496)||(37649193-37649297)
chr1 (395-495)||(38632323-38632423)
chr1 (394-497)||(2581912-2582015)
chr1 (393-499)||(38595150-38595256)
chr1 (397-499)||(41608491-41608593)
chr1 (397-495)||(48716284-48716382)
chr1 (391-499)||(26440728-26440836)
chr1 (397-499)||(43132-43234)
chr1 (397-499)||(9474874-9474976)
chr1 (397-499)||(47452318-47452420)
chr1 (397-499)||(50590998-50591100)
chr1 (402-495)||(26274437-26274530)
chr1 (398-495)||(44453980-44454077)
chr1 (419-499)||(3000341-3000421)
chr1 (419-499)||(50630480-50630560)
chr1 (424-499)||(41758832-41758907)
chr1 (419-497)||(11152378-11152456)
chr1 (446-497)||(3302533-3302584)
chr1 (440-497)||(48489343-48489400)
chr1 (394-466)||(23597122-23597194)
[»] chr7 (33 HSPs)
chr7 (397-499)||(19329842-19329944)
chr7 (402-499)||(3784000-3784097)
chr7 (398-499)||(35522877-35522978)
chr7 (393-497)||(7727902-7728006)
chr7 (395-499)||(19436185-19436289)
chr7 (396-499)||(3434561-3434664)
chr7 (419-499)||(3694389-3694469)
chr7 (396-499)||(22343360-22343463)
chr7 (396-499)||(36361911-36362014)
chr7 (393-499)||(35468853-35468959)
chr7 (394-499)||(40957704-40957809)
chr7 (395-499)||(7389387-7389491)
chr7 (395-499)||(38044195-38044299)
chr7 (420-499)||(8238236-8238315)
chr7 (396-499)||(36362025-36362128)
chr7 (388-499)||(41915732-41915843)
chr7 (397-499)||(21234401-21234503)
chr7 (397-499)||(32564424-32564526)
chr7 (397-499)||(35137533-35137635)
chr7 (397-491)||(46374808-46374902)
chr7 (402-499)||(32951491-32951588)
chr7 (395-499)||(8080381-8080485)
chr7 (395-499)||(36208171-36208275)
chr7 (396-499)||(26296643-26296746)
chr7 (388-499)||(38837208-38837319)
chr7 (392-499)||(40846111-40846218)
chr7 (396-499)||(46033799-46033902)
chr7 (397-499)||(4999512-4999614)
chr7 (397-499)||(38267040-38267142)
chr7 (393-466)||(18207176-18207249)
chr7 (427-499)||(16374822-16374894)
chr7 (393-473)||(45223038-45223118)
chr7 (397-499)||(41423682-41423784)
[»] chr8 (27 HSPs)
chr8 (396-497)||(37038478-37038579)
chr8 (396-499)||(32032724-32032826)
chr8 (393-499)||(5957826-5957932)
chr8 (397-499)||(43414579-43414681)
chr8 (419-499)||(40423941-40424021)
chr8 (397-499)||(15048180-15048281)
chr8 (397-499)||(15197333-15197435)
chr8 (399-499)||(10621085-10621185)
chr8 (397-499)||(504119-504221)
chr8 (397-499)||(1179938-1180040)
chr8 (393-499)||(16056399-16056505)
chr8 (393-499)||(16383373-16383479)
chr8 (419-499)||(14547944-14548024)
chr8 (395-499)||(15258927-15259031)
chr8 (395-499)||(24307791-24307895)
chr8 (397-499)||(12831047-12831149)
chr8 (397-499)||(23122595-23122697)
chr8 (397-499)||(34012294-34012396)
chr8 (395-499)||(4854861-4854965)
chr8 (395-499)||(34307214-34307318)
chr8 (395-499)||(42221513-42221617)
chr8 (397-499)||(30479472-30479574)
chr8 (394-499)||(10284629-10284734)
chr8 (419-499)||(8841430-8841510)
chr8 (396-452)||(25838196-25838252)
chr8 (393-460)||(24307625-24307692)
chr8 (446-499)||(9122234-9122287)
[»] scaffold0321 (1 HSPs)
scaffold0321 (388-499)||(10107-10218)
[»] chr4 (25 HSPs)
chr4 (397-499)||(41236347-41236449)
chr4 (393-499)||(50052426-50052532)
chr4 (397-497)||(50526171-50526271)
chr4 (395-499)||(55475189-55475293)
chr4 (388-499)||(19670714-19670825)
chr4 (396-499)||(47986207-47986310)
chr4 (429-499)||(56300163-56300233)
chr4 (395-495)||(29547961-29548061)
chr4 (395-499)||(32766956-32767060)
chr4 (397-499)||(6034044-6034146)
chr4 (393-499)||(42044365-42044471)
chr4 (394-499)||(29239883-29239988)
chr4 (395-499)||(48183047-48183151)
chr4 (397-499)||(40574779-40574881)
chr4 (396-499)||(44536744-44536846)
chr4 (396-499)||(50813890-50813993)
chr4 (393-499)||(480445-480551)
chr4 (397-499)||(11511460-11511562)
chr4 (397-499)||(31910192-31910294)
chr4 (419-499)||(17983741-17983821)
chr4 (420-499)||(29977908-29977987)
chr4 (397-499)||(3481654-3481756)
chr4 (397-499)||(8343161-8343263)
chr4 (446-499)||(41823931-41823984)
chr4 (397-495)||(54473535-54473633)
[»] scaffold1268 (1 HSPs)
scaffold1268 (397-499)||(927-1029)
[»] scaffold1267 (1 HSPs)
scaffold1267 (397-499)||(927-1029)
[»] scaffold0237 (1 HSPs)
scaffold0237 (397-499)||(4029-4131)
[»] scaffold0018 (1 HSPs)
scaffold0018 (422-499)||(152523-152600)
[»] scaffold0316 (1 HSPs)
scaffold0316 (420-499)||(17077-17156)


Alignment Details
Target: chr6 (Bit Score: 259; Significance: 1e-144; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 259; E-Value: 1e-144
Query Start/End: Original strand, 64 - 371
Target Start/End: Original strand, 34883324 - 34883636
Alignment:
Q  64 ctactgttaccttgttttactacctacaaaatctagtctagtctatctaggaacatagtaatacttgtcaccgttggattttccttagacaaggatcatt 163  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  34883324 ctactgttaccttgttttgctacctacaaaatctagtctagtctatctaggaacatagtaatact-gtcaccgttggattttccttagacaaggatcatt 34883422  T
Q  164 catgactgagtttgtgatttacatgcatattacgtggcttcttatcctctttccatctcattgttgttta------acttccatacatatattgctattt 257  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||      | ||||||||||||||||||||||    
T  34883423 catgagtgagtttgtgatttacatgcatattacgtggcttcttatcctctttccatctcattgttgtttaatttccaattccatacatatattgctattt 34883522  T
Q  258 tcacccctcacttttcctaatcattaatagagtaacacaaatagcatccgttttaacgtattctttctaaaatttactttttcattagataaaatatata 357  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||| |||||    
T  34883523 tcacccctcacttttcctaatcattaatagagtaacacaaatagcatccattttaacgtattctttctcaaatttactttttcattagataaaacatata 34883622  T
Q  358 tgggtcttaccact 371  Q
    ||||||||||||||    
T  34883623 tgggtcttaccact 34883636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 392 - 499
Target Start/End: Complemental strand, 31110864 - 31110759
Alignment:
Q  392 taaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcaca 491  Q
    |||||||||||||||| ||||||||  ||||||||||||||| | ||||||| |||||  |||||||||||||| | || ||||| ||||||||||||||    
T  31110864 taaaagagttatgatacatagacatccttaggtggcaatacaccctttgacactcaca--aaaatctgacacgtaaccacatggaccctgcacaagcaca 31110767  T
Q  492 ctttctct 499  Q
    ||||||||    
T  31110766 ctttctct 31110759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 397 - 499
Target Start/End: Original strand, 17598554 - 17598656
Alignment:
Q  397 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 496  Q
    |||| |||||| |||||||   |||||||||||||||||||||||||  ||||||||||||||||||||  |||  |||| || ||||||||||||||||    
T  17598554 gagtaatgatacatagacacccttaggtggcaatacatcttttgacacccacacaaaaatctgacacgttgtcacgtggaccccgcacaagcacactttc 17598653  T
Q  497 tct 499  Q
    |||    
T  17598654 tct 17598656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 419 - 499
Target Start/End: Original strand, 11427640 - 11427720
Alignment:
Q  419 ttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttctct 499  Q
    ||||||||||||||||| |||||||  ||||||||||||||||||||  |||  ||||||| |||||||||||||||||||    
T  11427640 ttaggtggcaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacactttctct 11427720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 396 - 499
Target Start/End: Original strand, 31976247 - 31976350
Alignment:
Q  396 agagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacacttt 495  Q
    |||||||||||| ||||||||  ||||||||||||| | | ||| |||  ||||||||||||||||||||| ||| ||| | || |||||||||||||||    
T  31976247 agagttatgatacatagacatccttaggtggcaatataccctttaacacccacacaaaaatctgacacgtggtcacatgaaccccgcacaagcacacttt 31976346  T
Q  496 ctct 499  Q
    ||||    
T  31976347 ctct 31976350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 388 - 499
Target Start/End: Complemental strand, 23128236 - 23128125
Alignment:
Q  388 tttttaaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaag 487  Q
    ||||||||||| | |||||| |||||||  |||| |||  |||||||| |||||||  ||||||||||||||||||||  |||  |||||||  ||||||    
T  23128236 tttttaaaagaataatgatatatagacacctttatgtgataatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggatcccacacaag 23128137  T
Q  488 cacactttctct 499  Q
    ||||||||||||    
T  23128136 cacactttctct 23128125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 394 - 499
Target Start/End: Complemental strand, 30341463 - 30341358
Alignment:
Q  394 aaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacact 493  Q
    |||||||||||||| ||| |||   ||||||||||||||| |  ||||||  ||||||||||||||||| |||  |||||||| || ||||||| |||||    
T  30341463 aaagagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacact 30341364  T
Q  494 ttctct 499  Q
    ||||||    
T  30341363 ttctct 30341358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 387 - 499
Target Start/End: Original strand, 15832567 - 15832679
Alignment:
Q  387 atttttaaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaa 486  Q
    ||||| |||||||| |||||| |||||||  |||||||| ||||| ||| |||||||  ||||||||||| ||||||||  |||  ||||||||||||||    
T  15832567 attttcaaaagagtaatgatacatagacacctttaggtgacaataaatcatttgacacccacacaaaaatttgacacgtagtcacgtggatcctgcacaa 15832666  T
Q  487 gcacactttctct 499  Q
      ||| |||||||    
T  15832667 atacattttctct 15832679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 395 - 499
Target Start/End: Complemental strand, 15990144 - 15990040
Alignment:
Q  395 aagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactt 494  Q
    ||||||||||||| ||| |||   ||||||||||||||| |  ||||||  ||||||||||||||||| |||  |||||||| || ||||||| ||||||    
T  15990144 aagagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactt 15990045  T
Q  495 tctct 499  Q
    |||||    
T  15990044 tctct 15990040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 419 - 499
Target Start/End: Original strand, 32869700 - 32869780
Alignment:
Q  419 ttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttctct 499  Q
    ||||||||||||||| | |||||||  ||||||||||||||||||||  |||  |||| || |||||||||||||||||||    
T  32869700 ttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 32869780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 397 - 499
Target Start/End: Original strand, 4231548 - 4231650
Alignment:
Q  397 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 496  Q
    ||||||||||  ||| ||||  ||||||||||||||| |  ||| ||  |||||||||||||||||||||  |||||||| || ||||||| ||||||||    
T  4231548 gagttatgattcataaacatcattaggtggcaatacaccccttgccacccacacaaaaatctgacacgtggccatatggaccccgcacaagtacactttc 4231647  T
Q  497 tct 499  Q
    |||    
T  4231648 tct 4231650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 397 - 499
Target Start/End: Complemental strand, 15508124 - 15508022
Alignment:
Q  397 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 496  Q
    ||||||||||| ||| |||   ||||||||||||||| |  ||||||  ||||||||||||||||| |||  |||||||| || ||||||| ||||||||    
T  15508124 gagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttc 15508025  T
Q  497 tct 499  Q
    |||    
T  15508024 tct 15508022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 397 - 499
Target Start/End: Original strand, 29857827 - 29857929
Alignment:
Q  397 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 496  Q
    |||| |||||| |||||||  ||||| |||||||||| ||||| |||  ||||||||||||||||||||  | |  ||||||| ||| ||||||||||||    
T  29857827 gagtaatgatacatagacacctttagatggcaatacaccttttaacacccacacaaaaatctgacacgtagttacgtggatcccgcataagcacactttc 29857926  T
Q  497 tct 499  Q
    |||    
T  29857927 tct 29857929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 394 - 499
Target Start/End: Complemental strand, 6209568 - 6209463
Alignment:
Q  394 aaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacact 493  Q
    ||||||| |||||| |||||||   |||||||||||||||   ||||||| ||||||||||||||| |||||  |||  |||| || |||| ||||||||    
T  6209568 aaagagtaatgatacatagacacccttaggtggcaatacactatttgacactcacacaaaaatctgtcacgtagtcacgtggaccccgcactagcacact 6209469  T
Q  494 ttctct 499  Q
    ||||||    
T  6209468 ttctct 6209463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 402 - 499
Target Start/End: Complemental strand, 22880753 - 22880656
Alignment:
Q  402 atgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttctct 499  Q
    |||||| |||||||   ||||||||||||||| | |||||||  ||||||||| ||||||||||  |||  |||| || |||||||||||||||||||    
T  22880753 atgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaattctgacacgtagtcacgtggaccccgcacaagcacactttctct 22880656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 397 - 465
Target Start/End: Complemental strand, 31109500 - 31109432
Alignment:
Q  397 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgt 465  Q
    |||| ||||| ||||||||   ||||||||||||||| | |||||||| ||||||||||||||||||||    
T  31109500 gagtaatgattaatagacacccttaggtggcaatacaccctttgacatccacacaaaaatctgacacgt 31109432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 393 - 499
Target Start/End: Original strand, 12732478 - 12732584
Alignment:
Q  393 aaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacac 492  Q
    |||||||| |||||| ||||||||| ||| ||||||||| |    ||||||  |||||||||||||||||||||   || |||||||  || |||||||     
T  12732478 aaaagagtaatgatacatagacattcttaagtggcaatataatcattgacacccacacaaaaatctgacacgtggctatgtggatcccacataagcacat 12732577  T
Q  493 tttctct 499  Q
    |||||||    
T  12732578 tttctct 12732584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 396 - 462
Target Start/End: Complemental strand, 22422119 - 22422053
Alignment:
Q  396 agagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgaca 462  Q
    ||||| |||||| ||||||||  ||||||||||||| |||| |||||| ||| |||||| |||||||    
T  22422119 agagtaatgatacatagacatccttaggtggcaatagatctcttgacactcatacaaaattctgaca 22422053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 402 - 499
Target Start/End: Complemental strand, 28536581 - 28536486
Alignment:
Q  402 atgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttctct 499  Q
    |||||| ||| ||||  ||||||||||||||| |  ||||||  ||||||||||||||||||  | |||| |||| ||  ||||||||||||||||||    
T  28536581 atgatacataaacatccttaggtggcaatacaacccttgacacccacacaaaaatctgacac--ggtcatgtggaccccacacaagcacactttctct 28536486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 397 - 499
Target Start/End: Complemental strand, 31953130 - 31953028
Alignment:
Q  397 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 496  Q
    |||| |||||| ||||||||  ||||||||||||||| |  ||||||  |||| |||||||||||| ||| |||| |||| |   ||||| |||||||||    
T  31953130 gagtaatgatagatagacatccttaggtggcaatacaccccttgacacccacataaaaatctgacatgtgttcatgtggacctcacacaaacacactttc 31953031  T
Q  497 tct 499  Q
    |||    
T  31953030 tct 31953028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 16 - 45
Target Start/End: Original strand, 34883273 - 34883302
Alignment:
Q  16 acaaaattggtcatcttcactcagcaagac 45  Q
    ||||||||||||||||||||||||||||||    
T  34883273 acaaaattggtcatcttcactcagcaagac 34883302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 65; Significance: 2e-28; HSPs: 32)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 391 - 499
Target Start/End: Complemental strand, 11348028 - 11347920
Alignment:
Q  391 ttaaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcac 490  Q
    ||||||||||||||||| ||||||||  ||||||| ||||||||| |||||||| |||||||||||||||||||||  || ||||| |||||| ||||||    
T  11348028 ttaaaagagttatgatacatagacatccttaggtgacaatacatcctttgacatccacacaaaaatctgacacgtggccacatggaccctgcataagcac 11347929  T
Q  491 actttctct 499  Q
    |||||||||    
T  11347928 actttctct 11347920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 397 - 499
Target Start/End: Complemental strand, 26141632 - 26141530
Alignment:
Q  397 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 496  Q
    ||||||||||| ||||||||  ||||||||||||||| | ||| |||  ||||||||||||||||||||| ||| ||||| ||  |||||||||||||||    
T  26141632 gagttatgatacatagacatccttaggtggcaatacaccctttaacacccacacaaaaatctgacacgtggtcacatggaccccacacaagcacactttc 26141533  T
Q  497 tct 499  Q
    |||    
T  26141532 tct 26141530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 397 - 499
Target Start/End: Original strand, 47531865 - 47531967
Alignment:
Q  397 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 496  Q
    ||||||||||| ||||||||  |||| |||||||||| ||||| |||| ||||||| |||||||||||||  |||||| | || ||||||||||||||||    
T  47531865 gagttatgatacatagacatccttagatggcaatacaccttttaacatccacacaagaatctgacacgtggccatatgaaccccgcacaagcacactttc 47531964  T
Q  497 tct 499  Q
    |||    
T  47531965 tct 47531967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 395 - 499
Target Start/End: Complemental strand, 27714993 - 27714889
Alignment:
Q  395 aagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactt 494  Q
    |||||| |||||| |||||||  ||||||||| |||||| | |||||||  ||||||||||||||||||||  |||| |||| || ||||||||||||||    
T  27714993 aagagtaatgatacatagacacctttaggtggtaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcacactt 27714894  T
Q  495 tctct 499  Q
    |||||    
T  27714893 tctct 27714889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 395 - 499
Target Start/End: Complemental strand, 41189866 - 41189762
Alignment:
Q  395 aagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactt 494  Q
    ||||||||||||| ||| ||||  ||||||||||||||||| |||||||  |||| |||||| |||||||||  || ||||| || ||||||||||||||    
T  41189866 aagagttatgatacatatacatccttaggtggcaatacatcatttgacacccacataaaaatttgacacgtggccacatggaccccgcacaagcacactt 41189767  T
Q  495 tctct 499  Q
    |||||    
T  41189766 tctct 41189762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 393 - 499
Target Start/End: Original strand, 49607410 - 49607516
Alignment:
Q  393 aaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacac 492  Q
    |||||||| |||||| |||||||   ||||||||||||||| | |||||||  ||||||||||||||||||||  |||  |||||||  |||||||||||    
T  49607410 aaaagagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccacacaagcacac 49607509  T
Q  493 tttctct 499  Q
    |||||||    
T  49607510 tttctct 49607516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 396 - 499
Target Start/End: Original strand, 17470404 - 17470507
Alignment:
Q  396 agagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacacttt 495  Q
    ||||| |||||| |||||||  |||||||||||||||| ||||| |||  ||||||||||||||||||||  |||  |||| ||  ||||||||||||||    
T  17470404 agagtaatgatacatagacacctttaggtggcaatacaccttttaacacccacacaaaaatctgacacgtagtcacgtggaccccacacaagcacacttt 17470503  T
Q  496 ctct 499  Q
    ||||    
T  17470504 ctct 17470507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 397 - 499
Target Start/End: Complemental strand, 51419460 - 51419358
Alignment:
Q  397 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 496  Q
    ||||||||||| ||||||||  |||| || ||||||||| ||| |||  |||||||||||||||||||||  || || || || ||||||||||||||||    
T  51419460 gagttatgatacatagacatccttagatgacaatacatcctttaacacccacacaaaaatctgacacgtggccacatagaccccgcacaagcacactttc 51419361  T
Q  497 tct 499  Q
    |||    
T  51419360 tct 51419358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 397 - 499
Target Start/End: Original strand, 53982011 - 53982113
Alignment:
Q  397 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 496  Q
    |||| |||||| |||||||   ||||||||||||||| | |||||||  ||||||||||||||||||||  |||  |||| || ||||||||||||||||    
T  53982011 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 53982110  T
Q  497 tct 499  Q
    |||    
T  53982111 tct 53982113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 419 - 499
Target Start/End: Original strand, 26754717 - 26754797
Alignment:
Q  419 ttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttctct 499  Q
    ||||||||||||||| | || ||||| ||||||||||||||||| ||| ||| ||||| || ||||||||||| |||||||    
T  26754717 ttaggtggcaatacacccttggacatccacacaaaaatctgacatgtggtcacatggaccccgcacaagcacattttctct 26754797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 395 - 499
Target Start/End: Complemental strand, 54868997 - 54868893
Alignment:
Q  395 aagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactt 494  Q
    |||||| |||||| |||||||   ||||||||||||||| |||||||||  ||||||||||||||||||||  | |  |||| || |||||| |||||||    
T  54868997 aagagtaatgatacatagacacccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtagttacgtggaccccgcacaatcacactt 54868898  T
Q  495 tctct 499  Q
    |||||    
T  54868897 tctct 54868893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 396 - 499
Target Start/End: Original strand, 8956761 - 8956864
Alignment:
Q  396 agagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacacttt 495  Q
    ||||| |||||| ||||||||  ||| ||||||||||||| |||||||  |||| |||||| ||||||||| |||| |||| | | |||||||||||||     
T  8956761 agagtaatgatacatagacatccttatgtggcaatacatcctttgacacccacataaaaatgtgacacgtgttcatgtggaccttacacaagcacacttc 8956860  T
Q  496 ctct 499  Q
    ||||    
T  8956861 ctct 8956864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 420 - 499
Target Start/End: Original strand, 31456712 - 31456791
Alignment:
Q  420 taggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttctct 499  Q
    |||| ||||||||| | |||||||  ||||||||||||||||||||  |||| |||| || |||||||||||||||||||    
T  31456712 taggcggcaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcacactttctct 31456791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 397 - 499
Target Start/End: Original strand, 33644200 - 33644302
Alignment:
Q  397 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 496  Q
    |||| |||||| |||||||   || |||||||||||| | |||||||  ||||||||||||||||||||  |||  |||| || ||||||||||||||||    
T  33644200 gagtaatgatacatagacacccttgggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 33644299  T
Q  497 tct 499  Q
    |||    
T  33644300 tct 33644302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 401 - 499
Target Start/End: Original strand, 52629304 - 52629402
Alignment:
Q  401 tatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttctct 499  Q
    ||||||| |||||||   ||||||||||||||| | |||||||  ||||||||||||||||||||  |||  |||| || | |||||||||||||||||    
T  52629304 tatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcacactttctct 52629402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 395 - 499
Target Start/End: Original strand, 11907369 - 11907473
Alignment:
Q  395 aagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactt 494  Q
    ||||||||||||| |||||||   ||||||| |||||||    |  ||| |||||||||||||||||| ||| ||||||||| || ||||||||||| ||    
T  11907369 aagagttatgatacatagacacccttaggtgacaatacacacctgaacactcacacaaaaatctgacatgtggtcatatggaccccgcacaagcacattt 11907468  T
Q  495 tctct 499  Q
    |||||    
T  11907469 tctct 11907473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 451 - 499
Target Start/End: Complemental strand, 25407193 - 25407145
Alignment:
Q  451 aaaaatctgacacgtgatcatatggatcctgcacaagcacactttctct 499  Q
    |||||||||||||||||||||||||||||  ||||| ||||||||||||    
T  25407193 aaaaatctgacacgtgatcatatggatcccacacaaacacactttctct 25407145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 396 - 499
Target Start/End: Complemental strand, 24700055 - 24699952
Alignment:
Q  396 agagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacacttt 495  Q
    ||||| |||||| ||||||||  |||| |||||||||| |||||||||  |||| ||||||||| ||||||  ||  |||| |||| |||| ||||||||    
T  24700055 agagtaatgatacatagacatccttagttggcaatacaccttttgacacccacataaaaatctggcacgtggccacgtggaccctgtacaaacacacttt 24699956  T
Q  496 ctct 499  Q
    ||||    
T  24699955 ctct 24699952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 396 - 499
Target Start/End: Original strand, 35536625 - 35536728
Alignment:
Q  396 agagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacacttt 495  Q
    ||||| |||||| ||||||||  ||| ||||||||||| | |||||||  |||| |||||| ||||||||| |||| |||| | | |||||||||||||     
T  35536625 agagtaatgatacatagacatccttatgtggcaatacaccatttgacacccacataaaaatgtgacacgtggtcatgtggaccttacacaagcacacttc 35536724  T
Q  496 ctct 499  Q
    ||||    
T  35536725 ctct 35536728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 395 - 465
Target Start/End: Complemental strand, 11095455 - 11095385
Alignment:
Q  395 aagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgt 465  Q
    |||||| |||||| |||||||   ||||||||||||||| | |||||||  ||||||||||||||||||||    
T  11095455 aagagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgt 11095385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 397 - 499
Target Start/End: Complemental strand, 14623939 - 14623837
Alignment:
Q  397 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 496  Q
    |||| |||||| ||||||||  ||||||||||||||| |  ||||||  |||| |||||||||||| ||| |||| |||| |   |||||||||||||||    
T  14623939 gagtaatgatacatagacatccttaggtggcaatacaccccttgacacccacataaaaatctgacatgtgttcatgtggacctcacacaagcacactttc 14623840  T
Q  497 tct 499  Q
    |||    
T  14623839 tct 14623837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 397 - 499
Target Start/End: Complemental strand, 20765015 - 20764913
Alignment:
Q  397 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 496  Q
    ||||||||| | ||||||||  |||||||| ||||||   ||| |||  |||||||||||||||||||||  || ||||| || | ||||||||||||||    
T  20765015 gagttatgagacatagacatccttaggtggtaatacactctttaacacccacacaaaaatctgacacgtggccacatggaccccgtacaagcacactttc 20764916  T
Q  497 tct 499  Q
    |||    
T  20764915 tct 20764913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 402 - 499
Target Start/End: Complemental strand, 13898150 - 13898053
Alignment:
Q  402 atgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttctct 499  Q
    |||||| ||| ||||  ||||||||||||||| |  ||||||  |||| |||||||||||||||| |||| |||| |   ||||||||||||||||||    
T  13898150 atgatagataaacatccttaggtggcaatacaccccttgacacccacataaaaatctgacacgtgttcatgtggacctcacacaagcacactttctct 13898053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 419 - 499
Target Start/End: Original strand, 8076415 - 8076495
Alignment:
Q  419 ttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttctct 499  Q
    |||||||||| |||| | |||||||  ||||||||||||| ||||||  |||  |||| || |||||||||||||||||||    
T  8076415 ttaggtggcagtacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcacactttctct 8076495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 427 - 499
Target Start/End: Original strand, 9563029 - 9563101
Alignment:
Q  427 caatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttctct 499  Q
    ||||||| | |||||||| || | |||||||||||||||  |||  |||||||||||||| ||||||||||||    
T  9563029 caatacaacctttgacatccatataaaaatctgacacgtagtcacgtggatcctgcacaaacacactttctct 9563101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 395 - 499
Target Start/End: Complemental strand, 33118953 - 33118849
Alignment:
Q  395 aagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactt 494  Q
    ||||||||||||| |||||||   ||||||| ||||||| | |||||||  ||||||||||| ||||||||  |||  |||||||  || || |||||||    
T  33118953 aagagttatgatacatagacacccttaggtgacaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggatccctcagaaacacactt 33118854  T
Q  495 tctct 499  Q
    |||||    
T  33118853 tctct 33118849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 395 - 471
Target Start/End: Original strand, 35093583 - 35093659
Alignment:
Q  395 aagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcat 471  Q
    |||||||| |||| |||||||  |||||||| ||||||| | |||||||| ||| ||||||||||||| ||| ||||    
T  35093583 aagagttacgatacatagacaactttaggtgacaatacaacatttgacatccacgcaaaaatctgacatgtggtcat 35093659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 419 - 499
Target Start/End: Complemental strand, 36331407 - 36331327
Alignment:
Q  419 ttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttctct 499  Q
    |||||||||||| || |  ||||||  ||||||||||||||||| |||  |||||||| || ||||||| |||||||||||    
T  36331407 ttaggtggcaatgcaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttctct 36331327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 419 - 499
Target Start/End: Complemental strand, 48587169 - 48587089
Alignment:
Q  419 ttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttctct 499  Q
    ||||||||||||||| | |||||||   ||| |||||||||||||||  |||  ||||||| ||||||| |||||||||||    
T  48587169 ttaggtggcaatacaccctttgacacctacataaaaatctgacacgtagtcacgtggatcccgcacaagtacactttctct 48587089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 394 - 465
Target Start/End: Complemental strand, 36707527 - 36707456
Alignment:
Q  394 aaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgt 465  Q
    ||||||| |||||| ||||| |   ||||||| ||||||| | |||||||| ||||||||||||||||||||    
T  36707527 aaagagtaatgatacatagatacccttaggtgacaatacaccctttgacatccacacaaaaatctgacacgt 36707456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 409 - 455
Target Start/End: Complemental strand, 32606002 - 32605956
Alignment:
Q  409 atagacatttttaggtggcaatacatcttttgacattcacacaaaaa 455  Q
    ||||||| | ||||||||||||||||  |||||||||||||||||||    
T  32606002 atagacaatcttaggtggcaatacattctttgacattcacacaaaaa 32605956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 397 - 499
Target Start/End: Complemental strand, 45058652 - 45058551
Alignment:
Q  397 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 496  Q
    ||||||||||| ||| |||   ||||||||||||||| | || ||||  |||| |||||||||||| |||| |||||||| || ||||||| | ||||||    
T  45058652 gagttatgatacataaacacccttaggtggcaatacaccctt-gacacccacataaaaatctgacatgtgaccatatggaccccgcacaagtatactttc 45058554  T
Q  497 tct 499  Q
    |||    
T  45058553 tct 45058551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 64; Significance: 9e-28; HSPs: 32)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 392 - 499
Target Start/End: Original strand, 42257188 - 42257295
Alignment:
Q  392 taaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcaca 491  Q
    |||||||||||||||| |||||||| |||||||||||||||||| |||||||  |||| ||||||||||||||||  || ||||| || |||||||||||    
T  42257188 taaaagagttatgatacatagacatctttaggtggcaatacatcatttgacacccacataaaaatctgacacgtggccacatggaccccgcacaagcaca 42257287  T
Q  492 ctttctct 499  Q
    ||||||||    
T  42257288 ctttctct 42257295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 397 - 499
Target Start/End: Complemental strand, 40614002 - 40613900
Alignment:
Q  397 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 496  Q
    ||||||||||| ||||||||  ||||||||||||||| | |||||||  |||||||||||||||||||||  || ||||| || ||||||||||||||||    
T  40614002 gagttatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtggccacatggaccccgcacaagcacactttc 40613903  T
Q  497 tct 499  Q
    |||    
T  40613902 tct 40613900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 395 - 499
Target Start/End: Original strand, 9058478 - 9058582
Alignment:
Q  395 aagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactt 494  Q
    |||||| |||||| |||||||   ||||||||||||||| | |||||||  ||||||||||||||||||||  |||| |||| || ||||||||||||||    
T  9058478 aagagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcacactt 9058577  T
Q  495 tctct 499  Q
    |||||    
T  9058578 tctct 9058582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 391 - 499
Target Start/End: Complemental strand, 38273248 - 38273140
Alignment:
Q  391 ttaaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcac 490  Q
    ||||||||||||||||| ||||||||| |||| |||||||||| | ||| |||  ||||||||||||||||||||   || ||||| || |||| |||||    
T  38273248 ttaaaagagttatgatacatagacattcttagatggcaatacaccctttaacacccacacaaaaatctgacacgtagccacatggaccccgcactagcac 38273149  T
Q  491 actttctct 499  Q
    |||||||||    
T  38273148 actttctct 38273140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 396 - 499
Target Start/End: Complemental strand, 5574589 - 5574486
Alignment:
Q  396 agagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacacttt 495  Q
    ||||| |||||| ||||||| | ||||||||||||||| | |||||||  |||| |||||||||||||||  |||  ||||||| |||||||||||||||    
T  5574589 agagtaatgatacatagacactcttaggtggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacacttt 5574490  T
Q  496 ctct 499  Q
    ||||    
T  5574489 ctct 5574486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 396 - 499
Target Start/End: Original strand, 33436210 - 33436313
Alignment:
Q  396 agagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacacttt 495  Q
    ||||| |||||| ||||||||  |||| |||||||||| |||||||||  |||| ||||||||||||||||| ||| ||||   ||||||||||||||||    
T  33436210 agagtaatgatacatagacatccttagatggcaatacaccttttgacacccacataaaaatctgacacgtgaccatgtggactttgcacaagcacacttt 33436309  T
Q  496 ctct 499  Q
    ||||    
T  33436310 ctct 33436313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 393 - 499
Target Start/End: Complemental strand, 45097839 - 45097733
Alignment:
Q  393 aaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacac 492  Q
    ||||||||||||||| ||| ||||  |||||||||||||||||  ||||||  || |||||||||||||| |||  |||||||| || ||||||| ||||    
T  45097839 aaaagagttatgatacataaacatccttaggtggcaatacatcccttgacacccatacaaaaatctgacatgtggccatatggaccccgcacaagtacac 45097740  T
Q  493 tttctct 499  Q
    |||||||    
T  45097739 tttctct 45097733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 402 - 499
Target Start/End: Complemental strand, 19930915 - 19930818
Alignment:
Q  402 atgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttctct 499  Q
    |||||| |||||||   ||||||||||||||| | |||||||| ||||||||||||||||||||  |||| |||| || |||||| ||||||||||||    
T  19930915 atgatacatagacacccttaggtggcaatacaccctttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaaacacactttctct 19930818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 395 - 499
Target Start/End: Complemental strand, 10249484 - 10249380
Alignment:
Q  395 aagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactt 494  Q
    |||||| |||||| |||||||   ||||||| ||||||| |||||||||  ||||||||||||||||||||  |||  |||| || ||||||||||||||    
T  10249484 aagagtaatgatacatagacacccttaggtgacaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 10249385  T
Q  495 tctct 499  Q
    |||||    
T  10249384 tctct 10249380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 392 - 499
Target Start/End: Complemental strand, 33436205 - 33436098
Alignment:
Q  392 taaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcaca 491  Q
    ||||||||| |||||| |||||||   ||||||||||||||| | |||||||  ||||||||||||| ||||||  |||  |||| || |||||||||||    
T  33436205 taaaagagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcaca 33436106  T
Q  492 ctttctct 499  Q
    ||||||||    
T  33436105 ctttctct 33436098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 397 - 499
Target Start/End: Original strand, 13438343 - 13438445
Alignment:
Q  397 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 496  Q
    |||| |||||| |||||||   ||||||| ||||||||| |||||||  ||||||||||||||||||||  |||  |||| || ||||||||||||||||    
T  13438343 gagtaatgatacatagacacccttaggtgacaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 13438442  T
Q  497 tct 499  Q
    |||    
T  13438443 tct 13438445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 397 - 499
Target Start/End: Original strand, 17473020 - 17473122
Alignment:
Q  397 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 496  Q
    |||| |||||| |||||||   |||| |||||||||| | |||||||  ||||||||||||||||||||  |||  ||||||| ||||||||||||||||    
T  17473020 gagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacactttc 17473119  T
Q  497 tct 499  Q
    |||    
T  17473120 tct 17473122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 397 - 499
Target Start/End: Original strand, 27864704 - 27864806
Alignment:
Q  397 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 496  Q
    |||| |||||| |||||||   ||| ||||||||||| | |||||||| |||||||||||||||||||| ||||  |||| || ||| ||||||||||||    
T  27864704 gagtaatgatacatagacacccttatgtggcaatacaccctttgacatccacacaaaaatctgacacgtaatcacgtggaccccgcaaaagcacactttc 27864803  T
Q  497 tct 499  Q
    |||    
T  27864804 tct 27864806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 397 - 499
Target Start/End: Complemental strand, 28381755 - 28381653
Alignment:
Q  397 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 496  Q
    |||| |||||| |||||||   ||||||||||||||| |||| ||||  ||||||||||||||||||||  ||| |||||  | ||||||||||||||||    
T  28381755 gagtaatgatacatagacacccttaggtggcaatacacctttcgacacccacacaaaaatctgacacgtagtcacatggactccgcacaagcacactttc 28381656  T
Q  497 tct 499  Q
    |||    
T  28381655 tct 28381653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 402 - 499
Target Start/End: Original strand, 28863460 - 28863557
Alignment:
Q  402 atgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttctct 499  Q
    |||||| |||||||   ||||||||||||||| | |||||||  ||||||||||||||||||||  |||  |||| || |||||||||||||||||||    
T  28863460 atgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 28863557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 396 - 497
Target Start/End: Complemental strand, 32505749 - 32505648
Alignment:
Q  396 agagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacacttt 495  Q
    ||||| |||||| |||||||   ||||||| ||||||| |||||||||  ||||||||||||||||||||  |||  |||| || |||||||||||||||    
T  32505749 agagtaatgatacatagacacccttaggtgacaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 32505650  T
Q  496 ct 497  Q
    ||    
T  32505649 ct 32505648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 397 - 497
Target Start/End: Original strand, 4060685 - 4060785
Alignment:
Q  397 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 496  Q
    |||| |||||| |||||||   ||||||| ||||||| |||||||||| ||||||||||||||||||||  | |  ||||||| ||| ||||||||||||    
T  4060685 gagtaatgatacatagacacccttaggtgacaatacaccttttgacatccacacaaaaatctgacacgtagttacgtggatcccgcataagcacactttc 4060784  T
Q  497 t 497  Q
    |    
T  4060785 t 4060785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 396 - 495
Target Start/End: Original strand, 2533123 - 2533221
Alignment:
Q  396 agagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacacttt 495  Q
    |||||||||||| ||||||||  ||| ||||||||||||| |||||||  ||||||||||||||||||||   || || || || |||||||||||||||    
T  2533123 agagttatgatacatagacatccttaagtggcaatacatcctttgaca-ccacacaaaaatctgacacgtagccacatagaccccgcacaagcacacttt 2533221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 397 - 499
Target Start/End: Original strand, 38732354 - 38732456
Alignment:
Q  397 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 496  Q
    ||||||||||| ||| |||   ||| ||| |||||||||  ||||||  ||||||||||||||||| ||| ||||||||| || ||||||| ||||||||    
T  38732354 gagttatgatacataaacacccttatgtgacaatacatcccttgacacccacacaaaaatctgacatgtggtcatatggaccccgcacaagtacactttc 38732453  T
Q  497 tct 499  Q
    |||    
T  38732454 tct 38732456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 397 - 499
Target Start/End: Original strand, 40701478 - 40701580
Alignment:
Q  397 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 496  Q
    |||| |||||| |||||||   ||||||||||||||| |||||||||  ||||||||||||||||||||  | |  |||| || |||||| |||||||||    
T  40701478 gagtaatgatacatagacacccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtagttacgtggaccccgcacaatcacactttc 40701577  T
Q  497 tct 499  Q
    |||    
T  40701578 tct 40701580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 402 - 499
Target Start/End: Original strand, 41575142 - 41575240
Alignment:
Q  402 atgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatgga-tcctgcacaagcacactttctct 499  Q
    |||||| ||||||||  |||| ||| |||||| | |||||||||||||||||||| ||||| ||| |||| ||||  ||| ||||||||||||||||||    
T  41575142 atgatacatagacatccttagatggtaatacaccctttgacattcacacaaaaatttgacatgtggtcatgtggacccctacacaagcacactttctct 41575240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 419 - 499
Target Start/End: Complemental strand, 2997565 - 2997485
Alignment:
Q  419 ttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttctct 499  Q
    ||||||||||||||| |  ||||||  ||||||||||||||||| |||  |||||||| || ||||||| |||||||||||    
T  2997565 ttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttctct 2997485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 396 - 499
Target Start/End: Complemental strand, 7465836 - 7465733
Alignment:
Q  396 agagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacacttt 495  Q
    ||||| |||||| |||||||   |||| |||||||||| | |||||||  ||||||||||||||||||||  |||  |||| ||  ||||||||||||||    
T  7465836 agagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccacacaagcacacttt 7465737  T
Q  496 ctct 499  Q
    ||||    
T  7465736 ctct 7465733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 392 - 499
Target Start/End: Original strand, 20700810 - 20700917
Alignment:
Q  392 taaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcaca 491  Q
    ||||||||| |||||| ||||||||  ||| ||||||||||| | ||||||    |||||||||||||||||||  |||  |||| || ||| |||||||    
T  20700810 taaaagagtaatgatacatagacatccttatgtggcaatacaccctttgactcctacacaaaaatctgacacgtagtcacgtggaccccgcataagcaca 20700909  T
Q  492 ctttctct 499  Q
    ||||||||    
T  20700910 ctttctct 20700917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 396 - 499
Target Start/End: Original strand, 36168835 - 36168938
Alignment:
Q  396 agagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacacttt 495  Q
    |||||||||||| ||||||||  |||| || ||||||||| ||| ||   ||||||||||| |||||||||  || ||||| || ||||||||| |||||    
T  36168835 agagttatgatacatagacatccttagatgacaatacatcctttaactcccacacaaaaatttgacacgtggccacatggaccccgcacaagcatacttt 36168934  T
Q  496 ctct 499  Q
    ||||    
T  36168935 ctct 36168938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 446 - 499
Target Start/End: Original strand, 13365402 - 13365455
Alignment:
Q  446 cacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttctct 499  Q
    ||||||||||||||||| |||| |||||||| || ||||||| |||||||||||    
T  13365402 cacacaaaaatctgacatgtgaccatatggaccccgcacaagtacactttctct 13365455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 395 - 499
Target Start/End: Original strand, 30915461 - 30915565
Alignment:
Q  395 aagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactt 494  Q
    |||||| |||||| |||||||   ||||||||||||||| | ||||||   |||| |||||||||||||||  |||  |||| || | ||||||||||||    
T  30915461 aagagtaatgatacatagacacccttaggtggcaatacaccctttgacccccacataaaaatctgacacgtagtcacgtggaccccgtacaagcacactt 30915560  T
Q  495 tctct 499  Q
    |||||    
T  30915561 tctct 30915565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 394 - 465
Target Start/End: Complemental strand, 38882916 - 38882846
Alignment:
Q  394 aaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgt 465  Q
    ||||||| |||||| |||||||   ||||||||||||| | | |||||||| ||||||||||||||||||||    
T  38882916 aaagagtaatgatacatagacacccttaggtggcaata-accctttgacatccacacaaaaatctgacacgt 38882846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 397 - 495
Target Start/End: Original strand, 43490121 - 43490219
Alignment:
Q  397 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacacttt 495  Q
    ||||||||||| ||| |||   ||||||| ||||||| |  ||||||  ||||||||||||||||| |||  |||||||| || ||||||| |||||||    
T  43490121 gagttatgatacataaacacccttaggtgacaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacacttt 43490219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 397 - 462
Target Start/End: Complemental strand, 17820104 - 17820039
Alignment:
Q  397 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgaca 462  Q
    ||||||||||| |||||||  | |||||||||||||| |  ||||||  |||||||||||||||||    
T  17820104 gagttatgatacatagacaactataggtggcaatacaccccttgacacccacacaaaaatctgaca 17820039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 447 - 499
Target Start/End: Complemental strand, 3035033 - 3034981
Alignment:
Q  447 acacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttctct 499  Q
    |||||||||||||||| ||| ||||||||| || ||||||| | |||||||||    
T  3035033 acacaaaaatctgacatgtggtcatatggaccccgcacaagtatactttctct 3034981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 447 - 499
Target Start/End: Original strand, 3154193 - 3154245
Alignment:
Q  447 acacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttctct 499  Q
    |||||||||||||||||||| ||| |||||||| || ||| |||| |||||||    
T  3154193 acacaaaaatctgacacgtggtcacatggatcccgcccaaacacagtttctct 3154245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 60; Significance: 2e-25; HSPs: 24)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 396 - 499
Target Start/End: Original strand, 6679697 - 6679800
Alignment:
Q  396 agagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacacttt 495  Q
    |||||||||||| |||||||| |||||||||||||||| |||||||||  ||||||||||||||||||||| ||| ||||| || |||||| |||| |||    
T  6679697 agagttatgatacatagacatctttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtggtcacatggaccccgcacaaacacatttt 6679796  T
Q  496 ctct 499  Q
    ||||    
T  6679797 ctct 6679800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 397 - 499
Target Start/End: Original strand, 28177775 - 28177877
Alignment:
Q  397 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 496  Q
    ||||||||||| ||||||||  ||||||||||||||| | |||||||  ||||||||||||||||||||| ||| ||||| || |||||| |||||||||    
T  28177775 gagttatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtggtcacatggaccccgcacaaacacactttc 28177874  T
Q  497 tct 499  Q
    |||    
T  28177875 tct 28177877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 396 - 499
Target Start/End: Original strand, 2740273 - 2740376
Alignment:
Q  396 agagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacacttt 495  Q
    ||||| |||||| ||||||||  ||||||||||||||| | |||||||  ||||||||||||||||||||  |||  ||||||| |||||||||||||||    
T  2740273 agagtaatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacacttt 2740372  T
Q  496 ctct 499  Q
    ||||    
T  2740373 ctct 2740376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 393 - 499
Target Start/End: Original strand, 13811648 - 13811754
Alignment:
Q  393 aaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacac 492  Q
    |||||||| | |||| |||||||   ||||||||||||||||| |||||||  ||||||||||||||||||||  |||  |||| || ||||||||||||    
T  13811648 aaaagagtaaagatacatagacacccttaggtggcaatacatcatttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacac 13811747  T
Q  493 tttctct 499  Q
    |||||||    
T  13811748 tttctct 13811754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 397 - 499
Target Start/End: Original strand, 26720516 - 26720618
Alignment:
Q  397 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 496  Q
    ||||||||||| ||||||||  ||||||||||||||| | ||| |||   ||| ||||||||||||||||  || |||||||| ||||||||||||||||    
T  26720516 gagttatgatacatagacatccttaggtggcaatacaccctttaacacctacaaaaaaatctgacacgtggccacatggatcccgcacaagcacactttc 26720615  T
Q  497 tct 499  Q
    |||    
T  26720616 tct 26720618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 397 - 499
Target Start/End: Original strand, 26990265 - 26990367
Alignment:
Q  397 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 496  Q
    ||||||||||| ||||||||  ||||||||||||||| | ||| |||   ||| ||||||||||||||||  || |||||||| ||||||||||||||||    
T  26990265 gagttatgatacatagacatccttaggtggcaatacaccctttaacacctacaaaaaaatctgacacgtggccacatggatcccgcacaagcacactttc 26990364  T
Q  497 tct 499  Q
    |||    
T  26990365 tct 26990367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 397 - 499
Target Start/End: Complemental strand, 35943992 - 35943890
Alignment:
Q  397 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 496  Q
    ||||||||||| |||||||   ||||||||||||||||| |||||||  ||||||||||||||||||||  | |  |||||||  |||||||||||||||    
T  35943992 gagttatgatacatagacacccttaggtggcaatacatcatttgacacccacacaaaaatctgacacgtagttacgtggatcccacacaagcacactttc 35943893  T
Q  497 tct 499  Q
    |||    
T  35943892 tct 35943890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 397 - 497
Target Start/End: Original strand, 14831814 - 14831914
Alignment:
Q  397 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 496  Q
    |||| |||||| ||||||| | ||||||||||||||| | |||||||  |||| |||||||||||||||  |||  ||||||| ||||||||||||||||    
T  14831814 gagtaatgatacatagacactcttaggtggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacactttc 14831913  T
Q  497 t 497  Q
    |    
T  14831914 t 14831914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 395 - 499
Target Start/End: Complemental strand, 15409712 - 15409608
Alignment:
Q  395 aagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactt 494  Q
    ||||||||||||| ||||||||  ||||||| ||||||||  |||||||  ||||||||||||||||||||   || ||||| || |||||||||||||     
T  15409712 aagagttatgatacatagacatccttaggtgacaatacattctttgacacccacacaaaaatctgacacgtagccacatggaccccgcacaagcacactc 15409613  T
Q  495 tctct 499  Q
    |||||    
T  15409612 tctct 15409608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 396 - 499
Target Start/End: Complemental strand, 2252269 - 2252166
Alignment:
Q  396 agagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacacttt 495  Q
    |||||||||||| ||| ||||  ||||||||||||||| |  ||||||  ||||||||||||||||| |||  |||||||| || ||||||| |||||||    
T  2252269 agagttatgatacataaacatccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacacttt 2252170  T
Q  496 ctct 499  Q
    ||||    
T  2252169 ctct 2252166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 393 - 499
Target Start/End: Complemental strand, 18520988 - 18520882
Alignment:
Q  393 aaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacac 492  Q
    |||||| | |||||| |||||||   ||||||||||||||| | |||||||  ||||||||||||||||||||  |||  |||| || ||||||||||||    
T  18520988 aaaagaataatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacac 18520889  T
Q  493 tttctct 499  Q
    |||||||    
T  18520888 tttctct 18520882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 397 - 499
Target Start/End: Original strand, 35785199 - 35785301
Alignment:
Q  397 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 496  Q
    |||| |||||| |||||||   ||||||||||||||| |||||||||  ||||||||||||||||||||  | |  ||||||| |||||| |||||||||    
T  35785199 gagtaatgatacatagacacccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtagttacgtggatcccgcacaatcacactttc 35785298  T
Q  497 tct 499  Q
    |||    
T  35785299 tct 35785301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 397 - 499
Target Start/End: Original strand, 40145407 - 40145509
Alignment:
Q  397 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 496  Q
    |||| |||||| |||||||   ||||||||||||||| | ||| |||| ||||||||||||||||||||  |||  |||| || ||||||||||||||||    
T  40145407 gagtaatgatacatagacacccttaggtggcaatacaccctttaacatccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 40145506  T
Q  497 tct 499  Q
    |||    
T  40145507 tct 40145509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 394 - 499
Target Start/End: Complemental strand, 3921368 - 3921263
Alignment:
Q  394 aaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacact 493  Q
    |||||||||||||| ||| |||   ||||||||||||||| |  ||||||  ||||||||||||||||| |||  |||||||| || ||||||| |||||    
T  3921368 aaagagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacact 3921269  T
Q  494 ttctct 499  Q
    ||||||    
T  3921268 ttctct 3921263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 393 - 497
Target Start/End: Original strand, 31008984 - 31009088
Alignment:
Q  393 aaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacac 492  Q
    ||||||||||||||| ||| ||||  ||||||| ||||||||  ||  |||  ||||||||||||||||||||  |||  ||||||| ||||||||||||    
T  31008984 aaaagagttatgatacataaacatccttaggtgacaatacattcttccacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacac 31009083  T
Q  493 tttct 497  Q
    |||||    
T  31009084 tttct 31009088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 420 - 495
Target Start/End: Complemental strand, 42414379 - 42414304
Alignment:
Q  420 taggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacacttt 495  Q
    |||||||||||||| | |||||||  ||||||||||||||||||||  |||| |||| || |||||||||||||||    
T  42414379 taggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcacacttt 42414304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 397 - 499
Target Start/End: Complemental strand, 33149738 - 33149636
Alignment:
Q  397 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 496  Q
    |||| |||||| |||||||   |||||||| |||||| | |||||||  ||||||||||| ||||||||  |||  ||||||| ||||||||||||||||    
T  33149738 gagtaatgatacatagacacccttaggtggtaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggatcccgcacaagcacactttc 33149639  T
Q  497 tct 499  Q
    |||    
T  33149638 tct 33149636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 397 - 497
Target Start/End: Complemental strand, 20073616 - 20073516
Alignment:
Q  397 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 496  Q
    |||| |||||| ||||||||  |||| || ||||||| | ||||||| ||||| ||||||||  ||||||| ||  |||| |||||||||||||||||||    
T  20073616 gagtaatgatatatagacatcattagatgacaatacaccctttgacactcacataaaaatcttgcacgtgaccacgtggaccctgcacaagcacactttc 20073517  T
Q  497 t 497  Q
    |    
T  20073516 t 20073516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 395 - 499
Target Start/End: Complemental strand, 36733044 - 36732940
Alignment:
Q  395 aagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactt 494  Q
    |||||| |||||| |||||||   |||||| |||||||| | |||||||  |||||||||||||||||| |  |||  |||| || ||||||||||||||    
T  36733044 aagagtaatgatacatagacacccttaggtagcaatacaccctttgacacccacacaaaaatctgacacatagtcacgtggaccccgcacaagcacactt 36732945  T
Q  495 tctct 499  Q
    |||||    
T  36732944 tctct 36732940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 420 - 499
Target Start/End: Complemental strand, 39557594 - 39557515
Alignment:
Q  420 taggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttctct 499  Q
    ||||||| |||||| || || |||| ||||||||||||||||||||||||| ||||| ||   |||| ||||||||||||    
T  39557594 taggtggtaatacacctcttaacatccacacaaaaatctgacacgtgatcacatggaccccatacaatcacactttctct 39557515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 409 - 499
Target Start/End: Complemental strand, 33825412 - 33825322
Alignment:
Q  409 atagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttctct 499  Q
    ||||||||| |||||||||||||||    ||||||  |||| |||||||||||||||| |||| || | | | ||||||||||||||||||    
T  33825412 atagacattcttaggtggcaatacactccttgacacccacataaaaatctgacacgtgttcatgtgaaccttacacaagcacactttctct 33825322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 395 - 499
Target Start/End: Complemental strand, 39688999 - 39688895
Alignment:
Q  395 aagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactt 494  Q
    ||||||||||||| ||| |||   ||| |||||||||||||  ||||||  ||||||||||||||| | ||| ||||||| | || ||| ||| ||||||    
T  39688999 aagagttatgatacataaacacccttaagtggcaatacatcccttgacacccacacaaaaatctgatatgtggtcatatgaaccccgcataagtacactt 39688900  T
Q  495 tctct 499  Q
    |||||    
T  39688899 tctct 39688895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 396 - 465
Target Start/End: Complemental strand, 41470517 - 41470448
Alignment:
Q  396 agagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgt 465  Q
    ||||| || ||| |||||||  |||||||||||||||||| ||| | ||||| | |||||||||||||||    
T  41470517 agagtaataatacatagacacctttaggtggcaatacatcctttaaaattcatataaaaatctgacacgt 41470448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 419 - 471
Target Start/End: Original strand, 16327923 - 16327975
Alignment:
Q  419 ttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcat 471  Q
    |||||||||||||||||  ||||||  |||| |||||||||||||||| ||||    
T  16327923 ttaggtggcaatacatccattgacacccacataaaaatctgacacgtgttcat 16327975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 58; Significance: 3e-24; HSPs: 28)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 394 - 499
Target Start/End: Original strand, 32813244 - 32813349
Alignment:
Q  394 aaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacact 493  Q
    |||||||||||||| ||||||||  ||||||||||||||| | ||| |||  ||||||||||||||||||||| ||| ||||| || |||||||||||||    
T  32813244 aaagagttatgatacatagacatccttaggtggcaatacaccctttaacacccacacaaaaatctgacacgtggtcacatggaccccgcacaagcacact 32813343  T
Q  494 ttctct 499  Q
    ||||||    
T  32813344 ttctct 32813349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 397 - 499
Target Start/End: Complemental strand, 27564835 - 27564733
Alignment:
Q  397 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 496  Q
    |||| |||||| ||||||||  ||||||||||||||| |||||||||  |||||||||||||||||||| ||||  |||| || ||||||||||||||||    
T  27564835 gagtaatgatacatagacatccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcacactttc 27564736  T
Q  497 tct 499  Q
    |||    
T  27564735 tct 27564733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 396 - 497
Target Start/End: Complemental strand, 51898784 - 51898683
Alignment:
Q  396 agagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacacttt 495  Q
    ||||| |||||| |||||||| |||||||||||||||| | |||||||  ||||||||||||||||||||  |||  ||||||| |||||||||||||||    
T  51898784 agagtaatgatacatagacatctttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacacttt 51898685  T
Q  496 ct 497  Q
    ||    
T  51898684 ct 51898683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 396 - 499
Target Start/End: Complemental strand, 37926539 - 37926436
Alignment:
Q  396 agagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacacttt 495  Q
    |||||||||||| ||||| || |||||||||||||||||||||| |||  |||| ||||||||||||||||  || |||||||| | ||||| |||||||    
T  37926539 agagttatgatacatagatatctttaggtggcaatacatcttttaacacccacataaaaatctgacacgtggccacatggatcccgtacaagtacacttt 37926440  T
Q  496 ctct 499  Q
    ||||    
T  37926439 ctct 37926436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 393 - 499
Target Start/End: Complemental strand, 8346492 - 8346386
Alignment:
Q  393 aaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacac 492  Q
    |||||||| |||||| |||| ||  |||||||||||||||| | |||||||  ||||||||||||||||||||  |||  |||| |||||||||||||||    
T  8346492 aaaagagtaatgatacatagtcacctttaggtggcaatacaccatttgacacccacacaaaaatctgacacgtagtcacgtggaccctgcacaagcacac 8346393  T
Q  493 tttctct 499  Q
    |||||||    
T  8346392 tttctct 8346386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 395 - 499
Target Start/End: Complemental strand, 49811629 - 49811525
Alignment:
Q  395 aagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactt 494  Q
    ||||||||||||| ||||||||  ||||||| ||||||| | |||||||| ||||||||||||||||||||   ||||| ||  | ||||||||||||||    
T  49811629 aagagttatgatagatagacatccttaggtgacaatacaccatttgacatccacacaaaaatctgacacgtagccatatagactccgcacaagcacactt 49811530  T
Q  495 tctct 499  Q
    |||||    
T  49811529 tctct 49811525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 393 - 499
Target Start/End: Complemental strand, 5959104 - 5958998
Alignment:
Q  393 aaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacac 492  Q
    ||||||||||||||| ||| |||   ||| ||||||||||| || ||||||  ||||||||||||||||| ||| ||||||||| || ||||||| ||||    
T  5959104 aaaagagttatgatacataaacacccttaagtggcaatacacctcttgacacccacacaaaaatctgacatgtggtcatatggaccccgcacaagtacac 5959005  T
Q  493 tttctct 499  Q
    |||||||    
T  5959004 tttctct 5958998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 402 - 499
Target Start/End: Complemental strand, 44548471 - 44548374
Alignment:
Q  402 atgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttctct 499  Q
    |||||| |||||||| |||||||||||||||| | ||||| |  ||||||||||||||||||||  |||  |||| || |||||||||||||||||||    
T  44548471 atgatacatagacatctttaggtggcaatacaccatttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 44548374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 392 - 496
Target Start/End: Original strand, 37649193 - 37649297
Alignment:
Q  392 taaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcaca 491  Q
    |||| |||| |||||| |||||||| ||||||||||||||||   |||||||  ||||||||||||||||||||| |||  || || | |||||||||||    
T  37649193 taaatgagtaatgatacatagacatctttaggtggcaatacactctttgacacccacacaaaaatctgacacgtggtcacgtgaattccgcacaagcaca 37649292  T
Q  492 ctttc 496  Q
    |||||    
T  37649293 ctttc 37649297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 395 - 495
Target Start/End: Complemental strand, 38632423 - 38632323
Alignment:
Q  395 aagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactt 494  Q
    |||||| |||||| |||||||   ||||||||||||||| ||||| |||| ||||||||||||||||||||  |||  |||| || ||||||||||||||    
T  38632423 aagagtaatgatacatagacacccttaggtggcaatacaccttttaacatccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 38632324  T
Q  495 t 495  Q
    |    
T  38632323 t 38632323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 394 - 497
Target Start/End: Original strand, 2581912 - 2582015
Alignment:
Q  394 aaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacact 493  Q
    ||||||| |||||| |||||||   ||||||||||||||| | |||||||  ||||||||||||||||||||  |||  |||| || |||||||||||||    
T  2581912 aaagagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacact 2582011  T
Q  494 ttct 497  Q
    ||||    
T  2582012 ttct 2582015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 393 - 499
Target Start/End: Original strand, 38595150 - 38595256
Alignment:
Q  393 aaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacac 492  Q
    |||||||| |||||| ||| |||  |||||||||||||||| | |||||||  ||||||||||||||||||||  |||  |||| || | ||||||||||    
T  38595150 aaaagagtaatgatacataaacacctttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcacac 38595249  T
Q  493 tttctct 499  Q
    |||||||    
T  38595250 tttctct 38595256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 397 - 499
Target Start/End: Complemental strand, 41608593 - 41608491
Alignment:
Q  397 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 496  Q
    ||||||||||| ||| ||||  ||||||||||||||| |  |||||| |||||||||||||||||| |||  |||||||| || | ||||| ||||||||    
T  41608593 gagttatgatacataaacatccttaggtggcaatacaccccttgacactcacacaaaaatctgacatgtggccatatggaccccgtacaagtacactttc 41608494  T
Q  497 tct 499  Q
    |||    
T  41608493 tct 41608491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 397 - 495
Target Start/End: Complemental strand, 48716382 - 48716284
Alignment:
Q  397 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacacttt 495  Q
    |||| |||||| |||||||   ||||||||||||||| | |||||||| ||||||||||||||||||||  |||  |||| || |||||||||||||||    
T  48716382 gagtaatgatacatagacacccttaggtggcaatacaccatttgacatccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 48716284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 391 - 499
Target Start/End: Original strand, 26440728 - 26440836
Alignment:
Q  391 ttaaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcac 490  Q
    ||||| |||||| |||| ||||||||  |||| || ||||||| | ||| |||  |||||||||||||||||||||  || |||||||| ||| ||||||    
T  26440728 ttaaatgagttaggatagatagacatccttagatgacaatacaccctttaacacccacacaaaaatctgacacgtggccacatggatcccgcataagcac 26440827  T
Q  491 actttctct 499  Q
    |||||||||    
T  26440828 actttctct 26440836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 397 - 499
Target Start/End: Original strand, 43132 - 43234
Alignment:
Q  397 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 496  Q
    |||| |||||| ||||||| | ||||| | ||||||||| |||||||  ||||||||||||||||||||  |||  ||||  | ||||||||||||||||    
T  43132 gagtaatgatacatagacagtcttaggagacaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggactccgcacaagcacactttc 43231  T
Q  497 tct 499  Q
    |||    
T  43232 tct 43234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 397 - 499
Target Start/End: Complemental strand, 9474976 - 9474874
Alignment:
Q  397 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 496  Q
    |||| |||||| |||||||   ||||||||||||||| | |||||||  ||||||||||||||||||||  |||  |||| || |||||| |||||||||    
T  9474976 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaaacacactttc 9474877  T
Q  497 tct 499  Q
    |||    
T  9474876 tct 9474874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 397 - 499
Target Start/End: Complemental strand, 47452420 - 47452318
Alignment:
Q  397 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 496  Q
    |||| |||||| |||||||   |||||||| |||||| | |||||||  ||||||||||||| ||||||  |||  ||||||| ||||||||||||||||    
T  47452420 gagtaatgatacatagacacccttaggtggtaatacaccctttgacacccacacaaaaatctaacacgtagtcacgtggatcccgcacaagcacactttc 47452321  T
Q  497 tct 499  Q
    |||    
T  47452320 tct 47452318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 397 - 499
Target Start/End: Complemental strand, 50591100 - 50590998
Alignment:
Q  397 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 496  Q
    ||||||||||| ||| |||   ||||||||||||||| |  ||||||  ||||||||||||||||| |||  |||||||| || ||||||| ||||||||    
T  50591100 gagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttc 50591001  T
Q  497 tct 499  Q
    |||    
T  50591000 tct 50590998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 402 - 495
Target Start/End: Original strand, 26274437 - 26274530
Alignment:
Q  402 atgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacacttt 495  Q
    |||||| |||||||   ||| ||||||||||||| |||||||| |||| ||||||||||||| |  |||  ||||||||||||||| |||||||    
T  26274437 atgatacatagacacccttatgtggcaatacatcatttgacatccacagaaaaatctgacacatagtcacgtggatcctgcacaagtacacttt 26274530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 398 - 495
Target Start/End: Original strand, 44453980 - 44454077
Alignment:
Q  398 agttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacacttt 495  Q
    |||||||||| |||||||  |||| |||||||||||||| |||| |  ||||||||||||||||| ||| | |  |||||||  ||||||||||||||    
T  44453980 agttatgatacatagacacctttaagtggcaatacatctcttgatacccacacaaaaatctgacatgtggttacgtggatcccacacaagcacacttt 44454077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 419 - 499
Target Start/End: Original strand, 3000341 - 3000421
Alignment:
Q  419 ttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttctct 499  Q
    ||||||||||||||| | |||||||  ||||||||||||||||||||  |||  |||| || | |||||||||||||||||    
T  3000341 ttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcacactttctct 3000421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 419 - 499
Target Start/End: Original strand, 50630480 - 50630560
Alignment:
Q  419 ttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttctct 499  Q
    ||||||||||||||||| ||||  |  ||||||||||||||||||||  |||  |||| || |||||||||||||||||||    
T  50630480 ttaggtggcaatacatcctttgttacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 50630560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 424 - 499
Target Start/End: Original strand, 41758832 - 41758907
Alignment:
Q  424 tggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttctct 499  Q
    |||||||||| | |||||||  ||||||||||||||||||||  ||| ||||| || |||||| ||||||||||||    
T  41758832 tggcaatacaccctttgacaaccacacaaaaatctgacacgtagtcacatggaccccgcacaaacacactttctct 41758907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 419 - 497
Target Start/End: Complemental strand, 11152456 - 11152378
Alignment:
Q  419 ttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttct 497  Q
    ||||||||||||||| | || ||||| ||||||||||||||||||||  |||| | || || |||||||||| ||||||    
T  11152456 ttaggtggcaatacacccttcgacatccacacaaaaatctgacacgtagtcatgtagaccccgcacaagcacgctttct 11152378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 446 - 497
Target Start/End: Complemental strand, 3302584 - 3302533
Alignment:
Q  446 cacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttct 497  Q
    |||||||||||||||||||| |||||||||| ||   |||||||||||||||    
T  3302584 cacacaaaaatctgacacgtaatcatatggaccccatacaagcacactttct 3302533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 440 - 497
Target Start/End: Original strand, 48489343 - 48489400
Alignment:
Q  440 gacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttct 497  Q
    ||||| ||||||||||||||||| ||| |||  ||||||| ||||||||||| |||||    
T  48489343 gacatccacacaaaaatctgacatgtggtcacgtggatcccgcacaagcacattttct 48489400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 394 - 466
Target Start/End: Complemental strand, 23597194 - 23597122
Alignment:
Q  394 aaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtg 466  Q
    ||||||| |||||| ||||||||  |||||||||||||||   ||||| |  |||| ||||||||||||||||    
T  23597194 aaagagtaatgatacatagacatcattaggtggcaatacactctttgatacccacataaaaatctgacacgtg 23597122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 55; Significance: 2e-22; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 397 - 499
Target Start/End: Original strand, 19329842 - 19329944
Alignment:
Q  397 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 496  Q
    |||| |||||| ||||||||  ||||||||||||||| |||||||||  |||||||||||||||||||| ||||  |||| || ||||||||||||||||    
T  19329842 gagtaatgatacatagacatccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcacactttc 19329941  T
Q  497 tct 499  Q
    |||    
T  19329942 tct 19329944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 402 - 499
Target Start/End: Original strand, 3784000 - 3784097
Alignment:
Q  402 atgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttctct 499  Q
    |||||| |||||||   |||||||||||||||||||||||||  ||||||||||||||||||||  |||  ||||||| |||||||||||||||||||    
T  3784000 atgatacatagacacccttaggtggcaatacatcttttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacactttctct 3784097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 398 - 499
Target Start/End: Original strand, 35522877 - 35522978
Alignment:
Q  398 agttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttct 497  Q
    |||||||||| ||||||||  ||| ||||||||||| | ||| |||  |||||||||||||||||||||  ||||||||||| |||||||||||||||||    
T  35522877 agttatgatacatagacatccttaagtggcaatacaccatttaacacccacacaaaaatctgacacgtggccatatggatcccgcacaagcacactttct 35522976  T
Q  498 ct 499  Q
    ||    
T  35522977 ct 35522978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 393 - 497
Target Start/End: Original strand, 7727902 - 7728006
Alignment:
Q  393 aaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacac 492  Q
    ||||||||||||||| ||| |||   |||||||| |||||| || |||||||||||| |||||||||||| ||| ||||||||| || ||||||| ||||    
T  7727902 aaaagagttatgatacataaacacccttaggtggtaatacacctcttgacattcacataaaaatctgacatgtggtcatatggaccccgcacaagtacac 7728001  T
Q  493 tttct 497  Q
    |||||    
T  7728002 tttct 7728006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 395 - 499
Target Start/End: Complemental strand, 19436289 - 19436185
Alignment:
Q  395 aagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactt 494  Q
    |||||| |||||| ||||||||  ||||||| ||||||| |||||||||  ||||||||||||||||||||  |||  ||||||| ||| ||||||||||    
T  19436289 aagagtaatgatacatagacatccttaggtgacaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcataagcacactt 19436190  T
Q  495 tctct 499  Q
    |||||    
T  19436189 tctct 19436185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 396 - 499
Target Start/End: Original strand, 3434561 - 3434664
Alignment:
Q  396 agagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacacttt 495  Q
    ||||| |||||| ||||||||  ||||||||||||||| | |||||||  |||||||||| |||||||||  |||  ||||||| |||||||||||||||    
T  3434561 agagtaatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaaactgacacgtagtcacgtggatcccgcacaagcacacttt 3434660  T
Q  496 ctct 499  Q
    ||||    
T  3434661 ctct 3434664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 419 - 499
Target Start/End: Original strand, 3694389 - 3694469
Alignment:
Q  419 ttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttctct 499  Q
    ||||||| ||||||| ||||| |||  ||||||||||||||||||||  |||| ||||||| |||||||||||||||||||    
T  3694389 ttaggtgacaatacaccttttaacacccacacaaaaatctgacacgtagtcatgtggatcccgcacaagcacactttctct 3694469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 396 - 499
Target Start/End: Original strand, 22343360 - 22343463
Alignment:
Q  396 agagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacacttt 495  Q
    |||||||||||| ||| |||   ||||||||||||||| |  ||||||  ||||||||||||||||| |||| |||||||| || ||||||| |||||||    
T  22343360 agagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtgaccatatggaccccgcacaagtacacttt 22343459  T
Q  496 ctct 499  Q
    ||||    
T  22343460 ctct 22343463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 396 - 499
Target Start/End: Complemental strand, 36362014 - 36361911
Alignment:
Q  396 agagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacacttt 495  Q
    ||||| |||||| |||||||   ||||||||||||||||| |||||||  ||||||||||||||||||||  |||  |||| ||  ||||||||||||||    
T  36362014 agagtaatgatacatagacacccttaggtggcaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggaccccacacaagcacacttt 36361915  T
Q  496 ctct 499  Q
    ||||    
T  36361914 ctct 36361911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 393 - 499
Target Start/End: Complemental strand, 35468959 - 35468853
Alignment:
Q  393 aaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacac 492  Q
    |||||||| |||||| ||||||||  |||| |||||||||||| |||||||  |||| |||||||| | | |||| ||| |||| ||||||||| |||||    
T  35468959 aaaagagtaatgatacatagacatccttagatggcaatacatcatttgacacccacataaaaatctaatatgtgaccatgtggaccctgcacaaacacac 35468860  T
Q  493 tttctct 499  Q
    |||||||    
T  35468859 tttctct 35468853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 394 - 499
Target Start/End: Original strand, 40957704 - 40957809
Alignment:
Q  394 aaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacact 493  Q
    ||||||| |||||| ||||||| | |||||||||||||||   ||||| |  ||||||||||||||||||||  |||  ||||||| | |||||||||||    
T  40957704 aaagagtaatgatacatagacactcttaggtggcaatacactctttgatacccacacaaaaatctgacacgtagtcacgtggatcccgtacaagcacact 40957803  T
Q  494 ttctct 499  Q
    ||||||    
T  40957804 ttctct 40957809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 395 - 499
Target Start/End: Original strand, 7389387 - 7389491
Alignment:
Q  395 aagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactt 494  Q
    |||||| |||||| |||||||   |||||||||||||||   |||||||  ||||||||||||||||||||  |||  |||| || ||||||||||||||    
T  7389387 aagagtaatgatacatagacacccttaggtggcaatacactctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 7389486  T
Q  495 tctct 499  Q
    |||||    
T  7389487 tctct 7389491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 395 - 499
Target Start/End: Original strand, 38044195 - 38044299
Alignment:
Q  395 aagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactt 494  Q
    ||||||||||||| ||| |||   ||||||||||||||| |  ||||||| ||||||||||||||||| ||   |||||||| || ||||||| ||||||    
T  38044195 aagagttatgatacataaacacccttaggtggcaatacaccccttgacatccacacaaaaatctgacatgtagccatatggaccccgcacaagtacactt 38044294  T
Q  495 tctct 499  Q
    |||||    
T  38044295 tctct 38044299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 420 - 499
Target Start/End: Original strand, 8238236 - 8238315
Alignment:
Q  420 taggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttctct 499  Q
    |||||||||||||| | |||||||  ||||||||||||||||| ||  ||||||||| || ||||||| |||||||||||    
T  8238236 taggtggcaatacaccctttgacacccacacaaaaatctgacatgtagtcatatggaccccgcacaagtacactttctct 8238315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 396 - 499
Target Start/End: Original strand, 36362025 - 36362128
Alignment:
Q  396 agagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacacttt 495  Q
    ||||| |||||| |||||||   |||||||| |||||||| |||||||  ||||||||||||||||||||  |||  |||| ||  ||||||||||||||    
T  36362025 agagtaatgatacatagacacccttaggtggtaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggaccccacacaagcacacttt 36362124  T
Q  496 ctct 499  Q
    ||||    
T  36362125 ctct 36362128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 388 - 499
Target Start/End: Original strand, 41915732 - 41915843
Alignment:
Q  388 tttttaaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaag 487  Q
    ||||||| |||||||||||| ||| |||   ||||||||||||||| |  ||||||   |||||||||||||||| |||  |||||||| || |||||||    
T  41915732 tttttaatagagttatgatacataaacacccttaggtggcaatacaccccttgacacctacacaaaaatctgacatgtggccatatggaccccgcacaag 41915831  T
Q  488 cacactttctct 499  Q
     |||||||||||    
T  41915832 tacactttctct 41915843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 397 - 499
Target Start/End: Original strand, 21234401 - 21234503
Alignment:
Q  397 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 496  Q
    ||||||||||| ||||||||  ||||||| ||||||| | ||||||| |||||||||||| ||||||||   || ||| | || ||||||||||| ||||    
T  21234401 gagttatgatacatagacatccttaggtgacaatacaccctttgacactcacacaaaaatttgacacgtagccacatgtaccccgcacaagcacattttc 21234500  T
Q  497 tct 499  Q
    |||    
T  21234501 tct 21234503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 397 - 499
Target Start/End: Complemental strand, 32564526 - 32564424
Alignment:
Q  397 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 496  Q
    ||||||||||| ||| ||||| ||||||||||||||| |  ||||||  ||||||||||||||||| |||   ||||||| || ||||||  ||||||||    
T  32564526 gagttatgatacataaacattcttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggctatatggaccccgcacaaatacactttc 32564427  T
Q  497 tct 499  Q
    |||    
T  32564426 tct 32564424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 397 - 499
Target Start/End: Original strand, 35137533 - 35137635
Alignment:
Q  397 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 496  Q
    |||| ||||||||||||||   ||||||||||||||| | |||||||  ||||||||||||| ||||||  |||  |||| || |||||| |||||||||    
T  35137533 gagtaatgataaatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaaacacactttc 35137632  T
Q  497 tct 499  Q
    |||    
T  35137633 tct 35137635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 397 - 491
Target Start/End: Complemental strand, 46374902 - 46374808
Alignment:
Q  397 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcaca 491  Q
    ||||||||||| ||||||||  ||||||||||| ||| | ||| |||  |||||||||||||||||||||  || ||||| || |||||||||||    
T  46374902 gagttatgatacatagacatccttaggtggcaacacaccctttaacacccacacaaaaatctgacacgtggccacatggaccccgcacaagcaca 46374808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 402 - 499
Target Start/End: Complemental strand, 32951588 - 32951491
Alignment:
Q  402 atgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttctct 499  Q
    |||||| ||||||| | |||| || ||||||||| ||| |||| ||||||||||||| ||||||  |||  |||| || |||||||||||||||||||    
T  32951588 atgatacatagacactcttagatgacaatacatcctttaacatccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcacactttctct 32951491  T

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Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 395 - 499
Target Start/End: Complemental strand, 8080485 - 8080381
Alignment:
Q  395 aagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactt 494  Q
    |||||| |||||| |||||||   ||||||||||||||| | |||||||   ||| |||||||||||||||  |||  |||| || ||||||||||||||    
T  8080485 aagagtaatgatacatagacacccttaggtggcaatacaccctttgacacctacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 8080386  T
Q  495 tctct 499  Q
    |||||    
T  8080385 tctct 8080381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 395 - 499
Target Start/End: Original strand, 36208171 - 36208275
Alignment:
Q  395 aagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactt 494  Q
    ||||||||||||| |||||||   |||||||| |||||||   ||||||  |||||||||| |||||| ||| |||  |||| |||||||||||||| ||    
T  36208171 aagagttatgatacatagacacccttaggtggtaatacattcattgacacccacacaaaaagctgacatgtggtcacgtggaccctgcacaagcacattt 36208270  T
Q  495 tctct 499  Q
    |||||    
T  36208271 tctct 36208275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 396 - 499
Target Start/End: Original strand, 26296643 - 26296746
Alignment:
Q  396 agagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacacttt 495  Q
    |||||||||||| ||||||||  ||||||| ||||| | | ||| |||| |||| |||||||||| |||||  |||||||| || |||||||| || |||    
T  26296643 agagttatgatacatagacatccttaggtgacaatataccctttaacatccacataaaaatctgatacgtggccatatggaccccgcacaagcgcatttt 26296742  T
Q  496 ctct 499  Q
    ||||    
T  26296743 ctct 26296746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 388 - 499
Target Start/End: Original strand, 38837208 - 38837319
Alignment:
Q  388 tttttaaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaag 487  Q
    |||| |||||||| |||||| |||||||   ||||||||||||||| | ||  |||   |||||||||||||||||||  |||  |||| || |||||||    
T  38837208 ttttcaaaagagtaatgatacatagacacccttaggtggcaatacacccttgtacacctacacaaaaatctgacacgtagtcacgtggaccccgcacaag 38837307  T
Q  488 cacactttctct 499  Q
    ||||||||||||    
T  38837308 cacactttctct 38837319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 392 - 499
Target Start/End: Complemental strand, 40846218 - 40846111
Alignment:
Q  392 taaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcaca 491  Q
    |||| ||||||||||| ||| ||||  ||||||||||||||| |  ||||||| ||||||||||||| ||| ||  | ||||||| || ||||||  |||    
T  40846218 taaaggagttatgatacataaacatccttaggtggcaatacaccccttgacatccacacaaaaatctaacatgtagttatatggaccccgcacaaataca 40846119  T
Q  492 ctttctct 499  Q
    ||||||||    
T  40846118 ctttctct 40846111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 396 - 499
Target Start/End: Complemental strand, 46033902 - 46033799
Alignment:
Q  396 agagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacacttt 495  Q
    |||||||||||| ||||| ||| ||||||||||||||| | ||| |||  |||| |||||||||||||||| ||| ||| |  | ||||||||| | |||    
T  46033902 agagttatgatacatagatattcttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatgaactccgcacaagcatatttt 46033803  T
Q  496 ctct 499  Q
    ||||    
T  46033802 ctct 46033799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 397 - 499
Target Start/End: Complemental strand, 4999614 - 4999512
Alignment:
Q  397 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 496  Q
    |||| |||||| |||||||   |||| |||||||||| |||||||||  ||||||||||||||| ||||  |||  |||| || |||||| |||||||||    
T  4999614 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgatacgtagtcacgtggaccccgcacaaacacactttc 4999515  T
Q  497 tct 499  Q
    |||    
T  4999514 tct 4999512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 397 - 499
Target Start/End: Original strand, 38267040 - 38267142
Alignment:
Q  397 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 496  Q
    |||| |||||| |||||||   ||| ||| ||||||| | |||||||  ||||||||||||||||||||  |||  |||| || ||||||||||||||||    
T  38267040 gagtaatgatacatagacacccttatgtgacaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 38267139  T
Q  497 tct 499  Q
    |||    
T  38267140 tct 38267142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 393 - 466
Target Start/End: Original strand, 18207176 - 18207249
Alignment:
Q  393 aaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtg 466  Q
    ||||||||||||||| |||||||   ||||||||||||||| || ||||||  || |||||||||| |||||||    
T  18207176 aaaagagttatgatacatagacaaccttaggtggcaatacacctcttgacacccatacaaaaatctaacacgtg 18207249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 427 - 499
Target Start/End: Complemental strand, 16374894 - 16374822
Alignment:
Q  427 caatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttctct 499  Q
    |||||||||  ||||||| ||||||||||||||||||||| |||  ||||||   ||||||||||| ||||||    
T  16374894 caatacatcccttgacatccacacaaaaatctgacacgtggtcacgtggatctcacacaagcacacattctct 16374822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 393 - 473
Target Start/End: Original strand, 45223038 - 45223118
Alignment:
Q  393 aaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatat 473  Q
    |||||||| |||||| ||| ||||  ||||||||||||||||  ||  ||||  ||||||||||||||||||| |||||||    
T  45223038 aaaagagtaatgatatatatacatccttaggtggcaatacattcttgaacatctacacaaaaatctgacacgtaatcatat 45223118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 397 - 499
Target Start/End: Original strand, 41423682 - 41423784
Alignment:
Q  397 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 496  Q
    ||||||||||| ||||||||  |||| ||| |||||| || |||||| | |||||||||||||||| ||| |||  | ||||| | ||||||| | ||||    
T  41423682 gagttatgatacatagacatcattagatggtaatacacctcttgacacttacacaaaaatctgacatgtggtcacgtagatcccgtacaagcatattttc 41423781  T
Q  497 tct 499  Q
    |||    
T  41423782 tct 41423784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 54; Significance: 8e-22; HSPs: 27)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 396 - 497
Target Start/End: Original strand, 37038478 - 37038579
Alignment:
Q  396 agagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacacttt 495  Q
    ||||| |||||| |||||||| |||||||||||||||| | |||||||  ||||||||||||||||||||  |||  ||||||| |||||||||||||||    
T  37038478 agagtaatgatacatagacatctttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacacttt 37038577  T
Q  496 ct 497  Q
    ||    
T  37038578 ct 37038579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 396 - 499
Target Start/End: Original strand, 32032724 - 32032826
Alignment:
Q  396 agagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacacttt 495  Q
    |||||||||||| ||| |||   ||||||||||||||||| || ||||| ||||||||||||||||| |||  ||||||||||||||||||| |||||||    
T  32032724 agagttatgatacataaacacccttaggtggcaatacatcctt-gacatccacacaaaaatctgacatgtggccatatggatcctgcacaagtacacttt 32032822  T
Q  496 ctct 499  Q
    ||||    
T  32032823 ctct 32032826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 393 - 499
Target Start/End: Original strand, 5957826 - 5957932
Alignment:
Q  393 aaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacac 492  Q
    |||| ||| |||||| ||||||||| ||||||||||||||| | |||||||  ||||||||||||||||||||  |||  ||||||| |||||| |||||    
T  5957826 aaaaaagtaatgatacatagacattcttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaatcacac 5957925  T
Q  493 tttctct 499  Q
    |||||||    
T  5957926 tttctct 5957932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 397 - 499
Target Start/End: Complemental strand, 43414681 - 43414579
Alignment:
Q  397 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 496  Q
    ||||||||||| ||||||||  |||| |||||| ||| | |||||||  ||||||||||||| ||||||| ||| |||||||| ||||||||||||||||    
T  43414681 gagttatgatacatagacatccttagatggcaacacaccctttgacacccacacaaaaatctaacacgtggtcacatggatcccgcacaagcacactttc 43414582  T
Q  497 tct 499  Q
    |||    
T  43414581 tct 43414579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 419 - 499
Target Start/End: Complemental strand, 40424021 - 40423941
Alignment:
Q  419 ttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttctct 499  Q
    ||||||||||||||| | |||||||| ||||||||||||||||||||  |||| |||| || |||||||||||||||||||    
T  40424021 ttaggtggcaatacaccctttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcacactttctct 40423941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 397 - 499
Target Start/End: Complemental strand, 15048281 - 15048180
Alignment:
Q  397 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 496  Q
    ||||||||||| ||||||||  ||||||||||||||| | |||||||  ||||||||||||||||||||   || ||||| || ||||||||||||||||    
T  15048281 gagttatgatacatagacatccttaggtggcaatacaccctttgacac-cacacaaaaatctgacacgtagccacatggaccccgcacaagcacactttc 15048183  T
Q  497 tct 499  Q
    |||    
T  15048182 tct 15048180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 397 - 499
Target Start/End: Original strand, 15197333 - 15197435
Alignment:
Q  397 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 496  Q
    |||| |||||| ||||||| | ||||||||||||||| | |||||||  ||||||||||||||||||||  |||  |||| || ||||||||||||||||    
T  15197333 gagtaatgatacatagacactcttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 15197432  T
Q  497 tct 499  Q
    |||    
T  15197433 tct 15197435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 399 - 499
Target Start/End: Complemental strand, 10621185 - 10621085
Alignment:
Q  399 gttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttctc 498  Q
    ||||||||| ||||||||  |||||||| |||||| | |||||||  ||||||||||||||||||||   || || ||||| ||||||||||||||||||    
T  10621185 gttatgatacatagacatccttaggtggtaatacaccctttgacacccacacaaaaatctgacacgtagccacatcgatcccgcacaagcacactttctc 10621086  T
Q  499 t 499  Q
    |    
T  10621085 t 10621085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 397 - 499
Target Start/End: Complemental strand, 504221 - 504119
Alignment:
Q  397 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 496  Q
    |||| |||||| |||||||   ||||||||||||||| |||||||||  ||||||||||||||||||||  |||  |||| || |||||||||||| |||    
T  504221 gagtaatgatacatagacacccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacattc 504122  T
Q  497 tct 499  Q
    |||    
T  504121 tct 504119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 397 - 499
Target Start/End: Complemental strand, 1180040 - 1179938
Alignment:
Q  397 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 496  Q
    |||| |||||| |||||||   |||||||| |||||| | |||||||  ||||||||||||||||||||  |||| ||||| | ||||||||||||||||    
T  1180040 gagtaatgatacatagacacccttaggtggtaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggattccgcacaagcacactttc 1179941  T
Q  497 tct 499  Q
    |||    
T  1179940 tct 1179938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 393 - 499
Target Start/End: Complemental strand, 16056505 - 16056399
Alignment:
Q  393 aaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacac 492  Q
    ||||||||||||||| ||| ||||  ||| ||| |||||||||  ||||||  ||||||||||||||||| |||  |||||||| || ||||||| ||||    
T  16056505 aaaagagttatgatacataaacatccttatgtgacaatacatcccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacac 16056406  T
Q  493 tttctct 499  Q
    |||||||    
T  16056405 tttctct 16056399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 393 - 499
Target Start/End: Original strand, 16383373 - 16383479
Alignment:
Q  393 aaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacac 492  Q
    ||||||||||||||| ||| |||   ||||||||||||||| |  ||||||  ||||||||||||||||| |||  |||||||| || ||||||| ||||    
T  16383373 aaaagagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacac 16383472  T
Q  493 tttctct 499  Q
    |||||||    
T  16383473 tttctct 16383479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 419 - 499
Target Start/End: Original strand, 14547944 - 14548024
Alignment:
Q  419 ttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttctct 499  Q
    ||||||||||||||| | |||||||  ||||||||||||||||||||  |||  |||| || |||||||||||||||||||    
T  14547944 ttaggtggcaatacaccatttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 14548024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 395 - 499
Target Start/End: Complemental strand, 15259031 - 15258927
Alignment:
Q  395 aagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactt 494  Q
    ||||||||||||| ||||| | | |||| ||||||||||||  | ||||| |||| |||||||||||| ||| |||  |||| |||||||||||||| ||    
T  15259031 aagagttatgatacatagatactcttagatggcaatacatccctggacatccacataaaaatctgacatgtggtcacgtggaccctgcacaagcacattt 15258932  T
Q  495 tctct 499  Q
    |||||    
T  15258931 tctct 15258927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 395 - 499
Target Start/End: Complemental strand, 24307895 - 24307791
Alignment:
Q  395 aagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactt 494  Q
    ||||||||||||| ||| |||   |||||||||||||||||  ||||||  ||||||||||||||| | |||  |||||||| || ||||||| ||||||    
T  24307895 aagagttatgatacataaacacccttaggtggcaatacatcccttgacacccacacaaaaatctgatatgtggccatatggaccccgcacaagtacactt 24307796  T
Q  495 tctct 499  Q
    |||||    
T  24307795 tctct 24307791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 397 - 499
Target Start/End: Original strand, 12831047 - 12831149
Alignment:
Q  397 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 496  Q
    |||| |||||| |||||||   ||||||| ||||||| | |||||||  ||||||||||||||||||||  |||  |||| || ||||||||||||||||    
T  12831047 gagtaatgatacatagacacccttaggtgacaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 12831146  T
Q  497 tct 499  Q
    |||    
T  12831147 tct 12831149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 397 - 499
Target Start/End: Complemental strand, 23122697 - 23122595
Alignment:
Q  397 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 496  Q
    |||| |||||| |||||||   ||| ||||||||||| |||||||||  ||||||||||||||||||||  |||  |||| || ||| ||||||||||||    
T  23122697 gagtaatgatacatagacacccttaagtggcaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcataagcacactttc 23122598  T
Q  497 tct 499  Q
    |||    
T  23122597 tct 23122595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 397 - 499
Target Start/End: Complemental strand, 34012396 - 34012294
Alignment:
Q  397 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 496  Q
    |||| |||||| |||||||   |||||||| |||||| | |||||||  ||||||||||| ||||||||  |||  ||||||| ||||||||||||||||    
T  34012396 gagtaatgatacatagacacccttaggtggtaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggatcccgcacaagcacactttc 34012297  T
Q  497 tct 499  Q
    |||    
T  34012296 tct 34012294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 395 - 499
Target Start/End: Complemental strand, 4854965 - 4854861
Alignment:
Q  395 aagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactt 494  Q
    |||||| |||||| ||||||||  ||||||||||||||| | ||| |||   ||| |||||||||| | |||  || ||||| |||||||||||||||||    
T  4854965 aagagtaatgatacatagacatccttaggtggcaatacaccctttaacacctacataaaaatctgatatgtggccacatggaccctgcacaagcacactt 4854866  T
Q  495 tctct 499  Q
    |||||    
T  4854865 tctct 4854861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 395 - 499
Target Start/End: Original strand, 34307214 - 34307318
Alignment:
Q  395 aagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactt 494  Q
    ||||||||||||| ||| |||   ||||||||||||||| |  ||||||  ||||||||||||||||| |||  |||||| | || ||||||| ||||||    
T  34307214 aagagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggacatatgaaccccgcacaagtacactt 34307313  T
Q  495 tctct 499  Q
    |||||    
T  34307314 tctct 34307318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 395 - 499
Target Start/End: Original strand, 42221513 - 42221617
Alignment:
Q  395 aagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactt 494  Q
    |||||| |||||| ||| ||||  ||||||| ||||||||   | ||||  |||||||||||||||||||| |||||||||| ||   ||||||||||||    
T  42221513 aagagtaatgatacatatacatccttaggtgacaatacattcctggacacccacacaaaaatctgacacgtaatcatatggaccccatacaagcacactt 42221612  T
Q  495 tctct 499  Q
    |||||    
T  42221613 tctct 42221617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 397 - 499
Target Start/End: Complemental strand, 30479574 - 30479472
Alignment:
Q  397 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 496  Q
    ||||||||||| ||| |||   ||||||||||||||| | |||||||| |||| |||||||||||| |||   ||||||| |  ||||||| ||||||||    
T  30479574 gagttatgatacataaacacccttaggtggcaatacaccctttgacatccacataaaaatctgacatgtggctatatggacctcgcacaagtacactttc 30479475  T
Q  497 tct 499  Q
    |||    
T  30479474 tct 30479472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 394 - 499
Target Start/End: Complemental strand, 10284734 - 10284629
Alignment:
Q  394 aaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacact 493  Q
    |||||||||||||| |||||||   ||| ||| |||||||   |||||||  ||||||||||| ||||||||  |||  |||| || |||||||||||||    
T  10284734 aaagagttatgatacatagacacccttaagtgacaatacactctttgacacccacacaaaaatttgacacgtagtcacgtggaccccgcacaagcacact 10284635  T
Q  494 ttctct 499  Q
    ||||||    
T  10284634 ttctct 10284629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 419 - 499
Target Start/End: Complemental strand, 8841510 - 8841430
Alignment:
Q  419 ttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttctct 499  Q
    |||||||||| |||| | |||||||  ||||||||||||| ||||||  |||  |||| || |||||||||||||||||||    
T  8841510 ttaggtggcagtacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcacactttctct 8841430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 396 - 452
Target Start/End: Original strand, 25838196 - 25838252
Alignment:
Q  396 agagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaa 452  Q
    |||||||||||||||||| ||  |||||||||||||||  ||||||||| |||||||    
T  25838196 agagttatgataaatagatatccttaggtggcaatacactttttgacatccacacaa 25838252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 393 - 460
Target Start/End: Original strand, 24307625 - 24307692
Alignment:
Q  393 aaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctga 460  Q
    ||||||||||||||| ||| |||   |||||||||||||||||  ||||||  |||||||||||||||    
T  24307625 aaaagagttatgatacataaacacccttaggtggcaatacatccattgacacccacacaaaaatctga 24307692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 446 - 499
Target Start/End: Original strand, 9122234 - 9122287
Alignment:
Q  446 cacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttctct 499  Q
    ||||||||||||||||| ||  |||  ||||||| |||||||||||||||||||    
T  9122234 cacacaaaaatctgacatgtagtcacgtggatcccgcacaagcacactttctct 9122287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 388 - 499
Target Start/End: Complemental strand, 10218 - 10107
Alignment:
Q  388 tttttaaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaag 487  Q
    |||| ||||||||||||||| |||||||  |||||||||||||||||| |||||||| |||| |||||||||||||||  |||  |||| |  | |||||    
T  10218 ttttaaaaagagttatgatacatagacacctttaggtggcaatacatcctttgacatccacataaaaatctgacacgtagtcacgtggaccgcgtacaag 10119  T
Q  488 cacactttctct 499  Q
    ||||||||||||    
T  10118 cacactttctct 10107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 51; Significance: 5e-20; HSPs: 25)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 397 - 499
Target Start/End: Original strand, 41236347 - 41236449
Alignment:
Q  397 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 496  Q
    |||| |||||| |||||||   ||||||||||||||| |||||||||| ||||||||||||||||||||  |||  |||| || ||||||||||||||||    
T  41236347 gagtaatgatacatagacacccttaggtggcaatacaccttttgacatccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 41236446  T
Q  497 tct 499  Q
    |||    
T  41236447 tct 41236449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 393 - 499
Target Start/End: Complemental strand, 50052532 - 50052426
Alignment:
Q  393 aaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacac 492  Q
    |||||||| |||||| ||||||||  ||||||||||||||| | |||||||  ||||||||||||||||||||  |||  |||| || ||||||||||||    
T  50052532 aaaagagtaatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacac 50052433  T
Q  493 tttctct 499  Q
    |||||||    
T  50052432 tttctct 50052426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 397 - 497
Target Start/End: Complemental strand, 50526271 - 50526171
Alignment:
Q  397 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 496  Q
    |||| |||||| |||||||| |||||||||||||||| | |||||||  ||||||||||||||||||||| |||  ||||| | |||||||||| |||||    
T  50526271 gagtaatgatacatagacatctttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtggtcacgtggattccgcacaagcacgctttc 50526172  T
Q  497 t 497  Q
    |    
T  50526171 t 50526171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 395 - 499
Target Start/End: Original strand, 55475189 - 55475293
Alignment:
Q  395 aagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactt 494  Q
    ||||||||||||| ||| ||||  ||||||||||||||| | |||||||  ||||||||||||||||| |||  |||||||| |||||| ||| ||||||    
T  55475189 aagagttatgatacataaacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacatgtggccatatggaccctgcataagtacactt 55475288  T
Q  495 tctct 499  Q
    |||||    
T  55475289 tctct 55475293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 388 - 499
Target Start/End: Complemental strand, 19670825 - 19670714
Alignment:
Q  388 tttttaaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaag 487  Q
    |||| ||||||||||||||| ||| |||   ||||||||||||||| |  |||||| |||||||||||||||||| |||  |||||||| || |||||||    
T  19670825 ttttgaaaagagttatgatacataaacacccttaggtggcaatacaccccttgacactcacacaaaaatctgacatgtggccatatggaccccgcacaag 19670726  T
Q  488 cacactttctct 499  Q
     |||||||||||    
T  19670725 tacactttctct 19670714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 396 - 499
Target Start/End: Original strand, 47986207 - 47986310
Alignment:
Q  396 agagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacacttt 495  Q
    |||||||||||| ||| |||   |||||||||||||||||  ||||||| ||||||||||||||||| |||  |||||||| || ||||||| |||||||    
T  47986207 agagttatgatacataaacacccttaggtggcaatacatcccttgacatccacacaaaaatctgacatgtggccatatggaccccgcacaagtacacttt 47986306  T
Q  496 ctct 499  Q
    ||||    
T  47986307 ctct 47986310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 429 - 499
Target Start/End: Complemental strand, 56300233 - 56300163
Alignment:
Q  429 atacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttctct 499  Q
    ||||||| |||||||| ||||||||||||||||| ||| ||||||| ||||||||||| ||||||||||||    
T  56300233 atacatcatttgacatccacacaaaaatctgacatgtggtcatatgaatcctgcacaaacacactttctct 56300163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 395 - 495
Target Start/End: Complemental strand, 29548061 - 29547961
Alignment:
Q  395 aagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactt 494  Q
    ||||||||||||| ||| ||||  |||||||||||||||||  ||||||  ||||||||||||||||| |||  ||||||||||| ||| ||| ||||||    
T  29548061 aagagttatgatacataaacatccttaggtggcaatacatcccttgacacccacacaaaaatctgacatgtggccatatggatcccgcataagtacactt 29547962  T
Q  495 t 495  Q
    |    
T  29547961 t 29547961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 395 - 499
Target Start/End: Original strand, 32766956 - 32767060
Alignment:
Q  395 aagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactt 494  Q
    ||||||||||||| ||| ||| | ||||||||||||||| |  ||||||  || |||||||||||||| |||  |||||||| |||||||||| ||||||    
T  32766956 aagagttatgatacataaacactcttaggtggcaatacaccccttgacacccatacaaaaatctgacatgtggccatatggaccctgcacaagtacactt 32767055  T
Q  495 tctct 499  Q
    |||||    
T  32767056 tctct 32767060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 397 - 499
Target Start/End: Original strand, 6034044 - 6034146
Alignment:
Q  397 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 496  Q
    |||| |||||| |||||||   ||||||||||||||| | |||||||  ||||||||||||||||| ||  |||  ||||||| ||||||||||||||||    
T  6034044 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacatgtagtcacgtggatcccgcacaagcacactttc 6034143  T
Q  497 tct 499  Q
    |||    
T  6034144 tct 6034146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 393 - 499
Target Start/End: Complemental strand, 42044471 - 42044365
Alignment:
Q  393 aaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacac 492  Q
    |||||||| |||||| |||||||   ||||||||||||||||| ||  |||  ||||||||||||||||||||  |||  |||| || ||||||||||||    
T  42044471 aaaagagtaatgatacatagacacccttaggtggcaatacatccttgtacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacac 42044372  T
Q  493 tttctct 499  Q
    |||||||    
T  42044371 tttctct 42044365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 394 - 499
Target Start/End: Original strand, 29239883 - 29239988
Alignment:
Q  394 aaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacact 493  Q
    ||||||| |||||| |||||||   ||||||||||||||| | |||||||| ||||||||||||| ||||||  |||  |||| ||  ||||||||||||    
T  29239883 aaagagtaatgatacatagacacccttaggtggcaatacaccatttgacatccacacaaaaatctaacacgtagtcacgtggaccccacacaagcacact 29239982  T
Q  494 ttctct 499  Q
    ||||||    
T  29239983 ttctct 29239988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 395 - 499
Target Start/End: Complemental strand, 48183151 - 48183047
Alignment:
Q  395 aagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactt 494  Q
    |||||| |||||| |||||||   ||| ||||||||||| | |||||||  ||||||||||||||||||||  |||  |||| || ||||||||||||||    
T  48183151 aagagtaatgatacatagacacccttacgtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 48183052  T
Q  495 tctct 499  Q
    |||||    
T  48183051 tctct 48183047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 397 - 499
Target Start/End: Original strand, 40574779 - 40574881
Alignment:
Q  397 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacg-tgatcatatggatcctgcacaagcacacttt 495  Q
    ||||||||||| ||||||||  |||||||| |||||| | |||||||  ||||||||||||||||||| || | | |||||||| | |||||||||||||    
T  40574779 gagttatgatacatagacatccttaggtggtaatacaccctttgacacccacacaaaaatctgacacgctgct-acatggatcccgaacaagcacacttt 40574877  T
Q  496 ctct 499  Q
    ||||    
T  40574878 ctct 40574881  T

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Target: chr4; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 396 - 499
Target Start/End: Complemental strand, 44536846 - 44536744
Alignment:
Q  396 agagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacacttt 495  Q
    |||||||||||| ||| ||| ||||||||||||||||| | || ||||| ||||||||||||||||| ||| |||||| || ||  || ||| |||||||    
T  44536846 agagttatgatacataaacacttttaggtggcaatacaccctt-gacatccacacaaaaatctgacatgtggtcatatagaccccacataagtacacttt 44536748  T
Q  496 ctct 499  Q
    ||||    
T  44536747 ctct 44536744  T

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Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 396 - 499
Target Start/End: Complemental strand, 50813993 - 50813890
Alignment:
Q  396 agagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacacttt 495  Q
    |||||||||||| ||| ||| | |||||||| |||||| |  ||||||  ||||||||||||||||| ||| ||||||| | || ||||||| |||||||    
T  50813993 agagttatgatacataaacactcttaggtggtaatacaccccttgacacccacacaaaaatctgacatgtggtcatatgaaccccgcacaagtacacttt 50813894  T
Q  496 ctct 499  Q
    ||||    
T  50813893 ctct 50813890  T

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Target: chr4; HSP #17
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 393 - 499
Target Start/End: Complemental strand, 480551 - 480445
Alignment:
Q  393 aaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacac 492  Q
    |||||||| |||||| |||||||   ||||||| ||||||| | |||||||  ||||||||||||||||||||  |||  |||| || | ||||||||||    
T  480551 aaaagagtaatgatacatagacacccttaggtgacaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcacac 480452  T
Q  493 tttctct 499  Q
    |||||||    
T  480451 tttctct 480445  T

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Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 397 - 499
Target Start/End: Complemental strand, 11511562 - 11511460
Alignment:
Q  397 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 496  Q
    |||| |||||| |||||||   ||||||||||||||| | |||||||  |||| |||||||||||||||  |||  |||| || ||||||||||||||||    
T  11511562 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 11511463  T
Q  497 tct 499  Q
    |||    
T  11511462 tct 11511460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 397 - 499
Target Start/End: Original strand, 31910192 - 31910294
Alignment:
Q  397 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 496  Q
    ||||||||||| ||||||||  ||||||| |||||||   |||||||  |||||||||||||||||| |   || ||||| || ||||||||||||||||    
T  31910192 gagttatgatacatagacatccttaggtgacaatacactctttgacacccacacaaaaatctgacacatagccacatggaccccgcacaagcacactttc 31910291  T
Q  497 tct 499  Q
    |||    
T  31910292 tct 31910294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 419 - 499
Target Start/End: Complemental strand, 17983821 - 17983741
Alignment:
Q  419 ttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttctct 499  Q
    ||||||||||||||| |  ||||||  ||||||||||||||||| |||  |||||||| || ||||||| |||||||||||    
T  17983821 ttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttctct 17983741  T

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Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 420 - 499
Target Start/End: Original strand, 29977908 - 29977987
Alignment:
Q  420 taggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttctct 499  Q
    |||||||||||||| |  || |||  ||||||||||||||||||||  ||||||||| ||  ||||||||||||||||||    
T  29977908 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtagtcatatggaccccacacaagcacactttctct 29977987  T

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Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 397 - 499
Target Start/End: Original strand, 3481654 - 3481756
Alignment:
Q  397 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 496  Q
    |||| |||||| |||||||  ||||||||||||||||   |||||||  |||||||||||||||||| |  |||  |||| ||  |||||||||||||||    
T  3481654 gagtaatgatacatagacacctttaggtggcaatacactctttgacacccacacaaaaatctgacacatagtcacgtggaccccacacaagcacactttc 3481753  T
Q  497 tct 499  Q
    |||    
T  3481754 tct 3481756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 397 - 499
Target Start/End: Complemental strand, 8343263 - 8343161
Alignment:
Q  397 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 496  Q
    ||||||||||| ||| ||||  ||||||||||||||||| |||||||   ||| |||||||||||| |||  |||||||| || ||| ||| | ||||||    
T  8343263 gagttatgatacataaacatccttaggtggcaatacatcctttgacacctacataaaaatctgacatgtggccatatggaccccgcataagtatactttc 8343164  T
Q  497 tct 499  Q
    |||    
T  8343163 tct 8343161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 446 - 499
Target Start/End: Original strand, 41823931 - 41823984
Alignment:
Q  446 cacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttctct 499  Q
    ||||||||||||||||||||  ||| ||||| || |||||||||||||||||||    
T  41823931 cacacaaaaatctgacacgtagtcacatggaccccgcacaagcacactttctct 41823984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 397 - 495
Target Start/End: Complemental strand, 54473633 - 54473535
Alignment:
Q  397 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacacttt 495  Q
    |||| |||||| |||||||   ||||||| ||||||| | |||||||  ||||||||||||| ||||||  |||  |||| || |||||||||||||||    
T  54473633 gagtaatgatacatagacacccttaggtgacaatacaccatttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcacacttt 54473535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1268 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold1268
Description:

Target: scaffold1268; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 397 - 499
Target Start/End: Complemental strand, 1029 - 927
Alignment:
Q  397 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 496  Q
    |||| |||||| |||||||| |||||||||||||||| | ||| |||| |||||||||| |||||||||  |||  || |||| ||||||||||||||||    
T  1029 gagtaatgatacatagacatctttaggtggcaatacaccctttaacatccacacaaaaaactgacacgtagtcacgtgaatcccgcacaagcacactttc 930  T
Q  497 tct 499  Q
    |||    
T  929 tct 927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1267 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold1267
Description:

Target: scaffold1267; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 397 - 499
Target Start/End: Complemental strand, 1029 - 927
Alignment:
Q  397 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 496  Q
    |||| |||||| |||||||| |||||||||||||||| | ||| |||| |||||||||| |||||||||  |||  || |||| ||||||||||||||||    
T  1029 gagtaatgatacatagacatctttaggtggcaatacaccctttaacatccacacaaaaaactgacacgtagtcacgtgaatcccgcacaagcacactttc 930  T
Q  497 tct 499  Q
    |||    
T  929 tct 927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0237 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 1)
Name: scaffold0237
Description:

Target: scaffold0237; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 397 - 499
Target Start/End: Original strand, 4029 - 4131
Alignment:
Q  397 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 496  Q
    |||| |||||| |||||||  ||||| |||||||||| ||||| |||  ||||||||||||||||||||  | |  ||||||| ||| ||||||||||||    
T  4029 gagtaatgatacatagacacctttagatggcaatacaccttttaacacccacacaaaaatctgacacgtagttacgtggatcccgcataagcacactttc 4128  T
Q  497 tct 499  Q
    |||    
T  4129 tct 4131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 422 - 499
Target Start/End: Original strand, 152523 - 152600
Alignment:
Q  422 ggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttctct 499  Q
    |||||||||||| |  ||||||  ||||||||||||||||| ||| |||||||||||| ||||||  |||||||||||    
T  152523 ggtggcaatacaccccttgacacccacacaaaaatctgacatgtggtcatatggatcccgcacaaatacactttctct 152600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0316 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 420 - 499
Target Start/End: Original strand, 17077 - 17156
Alignment:
Q  420 taggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttctct 499  Q
    ||||| ||||||||||  | ||||| ||||||||||||||||| ||| ||| ||||| || ||||||||||| |||||||    
T  17077 taggttgcaatacatccctcgacatccacacaaaaatctgacatgtggtcacatggaccccgcacaagcacattttctct 17156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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