View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11916_low_16 (Length: 395)

Name: NF11916_low_16
Description: NF11916
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11916_low_16
NF11916_low_16
[»] chr7 (56 HSPs)
chr7 (36-376)||(22298676-22299016)
chr7 (36-373)||(11834060-11834399)
chr7 (73-373)||(10338435-10338742)
chr7 (36-373)||(20334731-20335078)
chr7 (36-371)||(8568146-8568477)
chr7 (43-373)||(1812628-1812958)
chr7 (178-373)||(7697436-7697630)
chr7 (182-373)||(48642935-48643125)
chr7 (174-373)||(8118018-8118216)
chr7 (36-345)||(27100200-27100510)
chr7 (36-345)||(27177793-27178103)
chr7 (174-353)||(34751159-34751336)
chr7 (217-373)||(35819851-35820007)
chr7 (182-366)||(37375482-37375665)
chr7 (175-373)||(31287515-31287700)
chr7 (269-347)||(16359334-16359412)
chr7 (38-346)||(2734523-2734809)
chr7 (36-135)||(26208885-26208984)
chr7 (36-134)||(31287374-31287472)
chr7 (174-346)||(23729549-23729717)
chr7 (39-135)||(25007648-25007742)
chr7 (175-365)||(30855251-30855440)
chr7 (269-373)||(6879928-6880031)
chr7 (305-373)||(30079452-30079519)
chr7 (36-135)||(7697678-7697782)
chr7 (151-272)||(23675626-23675746)
chr7 (38-135)||(27456714-27456811)
chr7 (36-130)||(35495799-35495893)
chr7 (36-133)||(8117879-8117976)
chr7 (182-310)||(22701082-22701209)
chr7 (297-346)||(43908846-43908895)
chr7 (175-272)||(46147459-46147555)
chr7 (177-301)||(49012268-49012392)
chr7 (227-306)||(33434325-33434405)
chr7 (36-135)||(40849245-40849344)
chr7 (1-35)||(1663593-1663627)
chr7 (1-35)||(6783119-6783153)
chr7 (37-135)||(6879695-6879793)
chr7 (1-35)||(13310414-13310448)
chr7 (1-35)||(23396690-23396724)
chr7 (1-35)||(23821665-23821699)
chr7 (246-346)||(32237839-32237941)
chr7 (1-35)||(33855566-33855600)
chr7 (36-130)||(34751383-34751476)
chr7 (1-35)||(41670914-41670948)
chr7 (174-259)||(23032943-23033026)
chr7 (1-33)||(257258-257290)
chr7 (306-346)||(16535617-16535657)
chr7 (306-346)||(16630005-16630045)
chr7 (306-346)||(21237631-21237671)
chr7 (51-119)||(23675771-23675839)
chr7 (306-346)||(36550652-36550692)
chr7 (1-33)||(40703402-40703434)
chr7 (174-202)||(43202732-43202760)
chr7 (306-346)||(47483807-47483847)
chr7 (306-374)||(47646590-47646657)
[»] chr4 (76 HSPs)
chr4 (37-373)||(8484820-8485163)
chr4 (36-373)||(4642595-4642933)
chr4 (36-373)||(21069203-21069544)
chr4 (175-373)||(23625637-23625834)
chr4 (174-373)||(27743348-27743546)
chr4 (36-346)||(1564659-1564974)
chr4 (36-367)||(23449582-23449914)
chr4 (36-353)||(20986565-20986885)
chr4 (38-371)||(29232898-29233233)
chr4 (216-368)||(15724044-15724197)
chr4 (190-330)||(48653602-48653743)
chr4 (174-368)||(53934801-53934993)
chr4 (36-266)||(41325649-41325881)
chr4 (245-373)||(45464342-45464469)
chr4 (36-135)||(45464542-45464641)
chr4 (225-373)||(23120033-23120182)
chr4 (175-345)||(35014448-35014619)
chr4 (227-373)||(45983531-45983678)
chr4 (92-368)||(6102040-6102316)
chr4 (182-373)||(19753246-19753437)
chr4 (182-373)||(19786369-19786560)
chr4 (36-266)||(28148019-28148250)
chr4 (217-329)||(2940100-2940212)
chr4 (174-346)||(45226549-45226718)
chr4 (174-264)||(4688937-4689026)
chr4 (175-336)||(5122119-5122280)
chr4 (177-342)||(3666809-3666974)
chr4 (221-353)||(45150739-45150871)
chr4 (235-373)||(8312040-8312179)
chr4 (174-243)||(42199068-42199136)
chr4 (1-35)||(12016672-12016706)
chr4 (1-35)||(12016880-12016914)
chr4 (304-346)||(17845077-17845119)
chr4 (36-90)||(23625507-23625561)
chr4 (1-35)||(28245869-28245903)
chr4 (1-35)||(43943754-43943788)
chr4 (174-232)||(49641121-49641178)
chr4 (305-346)||(10778339-10778380)
chr4 (175-291)||(25686199-25686314)
chr4 (1-38)||(28395258-28395295)
chr4 (217-292)||(7784321-7784397)
chr4 (1-36)||(23018551-23018586)
chr4 (1-40)||(27048121-27048160)
chr4 (298-341)||(40494613-40494656)
chr4 (1-36)||(50858093-50858128)
chr4 (303-346)||(54273883-54273926)
chr4 (1-35)||(990628-990662)
chr4 (280-346)||(12916561-12916627)
chr4 (287-373)||(28147931-28148015)
chr4 (1-35)||(29113530-29113564)
chr4 (1-35)||(29669352-29669386)
chr4 (38-135)||(32222912-32223010)
chr4 (1-35)||(36558455-36558489)
chr4 (1-35)||(45427241-45427275)
chr4 (174-272)||(46471675-46471772)
chr4 (1-35)||(50858406-50858440)
chr4 (1-35)||(51470564-51470598)
chr4 (1-35)||(51470725-51470759)
chr4 (1-35)||(52214696-52214730)
chr4 (1-35)||(53740263-53740297)
chr4 (1-35)||(56511378-56511412)
chr4 (1-35)||(56511585-56511619)
chr4 (1-34)||(400373-400406)
chr4 (174-215)||(18536397-18536438)
chr4 (86-135)||(29701020-29701069)
chr4 (36-117)||(41260514-41260595)
chr4 (1-34)||(43972436-43972469)
chr4 (1-34)||(45426926-45426959)
chr4 (35-92)||(48293026-48293083)
chr4 (297-346)||(51907257-51907306)
chr4 (3-35)||(1923185-1923217)
chr4 (298-346)||(3349780-3349828)
chr4 (217-292)||(7764209-7764285)
chr4 (306-346)||(18881897-18881937)
chr4 (174-202)||(48293164-48293192)
chr4 (174-238)||(48602247-48602310)
[»] chr5 (62 HSPs)
chr5 (36-373)||(25495238-25495578)
chr5 (73-327)||(10090423-10090678)
chr5 (174-373)||(36567863-36568061)
chr5 (36-373)||(41455021-41455359)
chr5 (38-373)||(28224458-28224795)
chr5 (175-346)||(34087584-34087748)
chr5 (182-373)||(17131820-17132011)
chr5 (182-346)||(35240564-35240728)
chr5 (38-312)||(33792857-33793120)
chr5 (182-373)||(14652606-14652796)
chr5 (182-373)||(32244116-32244307)
chr5 (215-373)||(6595134-6595293)
chr5 (182-346)||(34881065-34881230)
chr5 (175-373)||(11402746-11402942)
chr5 (269-346)||(31075439-31075516)
chr5 (217-346)||(6894177-6894307)
chr5 (215-373)||(691332-691488)
chr5 (38-135)||(5175229-5175326)
chr5 (36-135)||(22553744-22553843)
chr5 (175-266)||(40331220-40331310)
chr5 (257-346)||(12264051-12264141)
chr5 (174-263)||(40692714-40692802)
chr5 (174-272)||(18432338-18432435)
chr5 (303-346)||(1681297-1681340)
chr5 (1-35)||(48300-48334)
chr5 (35-133)||(4414609-4414707)
chr5 (257-346)||(6367663-6367753)
chr5 (174-232)||(7591216-7591273)
chr5 (35-133)||(38147500-38147598)
chr5 (41-135)||(42920640-42920734)
chr5 (1-35)||(43490452-43490486)
chr5 (293-345)||(733881-733933)
chr5 (306-346)||(6718778-6718818)
chr5 (295-343)||(8150803-8150851)
chr5 (174-266)||(12378819-12378910)
chr5 (251-346)||(32721276-32721372)
chr5 (1-36)||(873684-873719)
chr5 (1-40)||(2716627-2716665)
chr5 (36-135)||(18432476-18432575)
chr5 (84-134)||(2802629-2802679)
chr5 (1-35)||(2908758-2908792)
chr5 (1-35)||(3762987-3763021)
chr5 (1-35)||(12965235-12965269)
chr5 (1-35)||(13413665-13413699)
chr5 (1-35)||(13843778-13843812)
chr5 (275-345)||(19402361-19402431)
chr5 (1-35)||(24994150-24994184)
chr5 (1-35)||(34457177-34457211)
chr5 (1-35)||(34457384-34457418)
chr5 (306-368)||(36760267-36760328)
chr5 (1-35)||(38131845-38131879)
chr5 (1-35)||(40168848-40168882)
chr5 (1-35)||(40169030-40169064)
chr5 (94-135)||(6633690-6633731)
chr5 (269-346)||(20191760-20191837)
chr5 (308-341)||(26007227-26007260)
chr5 (1-29)||(48099-48127)
chr5 (174-242)||(6633582-6633649)
chr5 (1-33)||(24918242-24918274)
chr5 (175-215)||(25715555-25715595)
chr5 (174-202)||(27571795-27571823)
chr5 (1-33)||(28358026-28358058)
[»] chr8 (44 HSPs)
chr8 (77-373)||(11219099-11219401)
chr8 (37-373)||(24681685-24682017)
chr8 (38-373)||(13325448-13325786)
chr8 (50-373)||(12193073-12193397)
chr8 (50-373)||(12437501-12437825)
chr8 (36-373)||(22810785-22811116)
chr8 (174-373)||(4785388-4785586)
chr8 (165-373)||(37162379-37162583)
chr8 (182-373)||(11017159-11017349)
chr8 (186-373)||(33566101-33566275)
chr8 (175-366)||(40436593-40436782)
chr8 (174-369)||(9012572-9012766)
chr8 (182-373)||(36340490-36340681)
chr8 (175-346)||(41346084-41346255)
chr8 (178-373)||(18755065-18755261)
chr8 (36-310)||(1271352-1271619)
chr8 (36-272)||(28441718-28441955)
chr8 (37-131)||(3155622-3155716)
chr8 (275-368)||(30253954-30254046)
chr8 (303-346)||(28073070-28073113)
chr8 (306-373)||(6591384-6591448)
chr8 (306-347)||(7428293-7428334)
chr8 (332-368)||(31497492-31497528)
chr8 (216-337)||(29914373-29914495)
chr8 (96-135)||(30252726-30252765)
chr8 (1-35)||(7621975-7622009)
chr8 (1-35)||(10989023-10989057)
chr8 (1-35)||(10989230-10989264)
chr8 (37-135)||(12073818-12073916)
chr8 (1-35)||(16454624-16454658)
chr8 (1-35)||(18905937-18905971)
chr8 (1-35)||(20760649-20760683)
chr8 (2-32)||(25186491-25186521)
chr8 (1-35)||(30066063-30066097)
chr8 (1-35)||(30176453-30176487)
chr8 (1-35)||(31767061-31767095)
chr8 (1-35)||(32931482-32931516)
chr8 (1-35)||(36997247-36997281)
chr8 (1-35)||(43599392-43599426)
chr8 (1-35)||(43599553-43599587)
chr8 (1-35)||(43984305-43984339)
chr8 (189-266)||(30253501-30253577)
chr8 (270-335)||(32063973-32064038)
chr8 (174-202)||(3129386-3129414)
[»] chr6 (45 HSPs)
chr6 (38-373)||(9686198-9686532)
chr6 (43-369)||(6399975-6400306)
chr6 (38-373)||(7169680-7170017)
chr6 (174-369)||(24644692-24644885)
chr6 (38-353)||(22413970-22414294)
chr6 (174-341)||(31945174-31945341)
chr6 (174-368)||(13092148-13092342)
chr6 (210-366)||(16971516-16971671)
chr6 (45-272)||(29048794-29049022)
chr6 (182-373)||(11417217-11417408)
chr6 (182-366)||(13532020-13532203)
chr6 (174-272)||(892080-892177)
chr6 (287-341)||(8135589-8135643)
chr6 (216-369)||(20500712-20500865)
chr6 (174-272)||(19134841-19134938)
chr6 (38-135)||(24644556-24644651)
chr6 (216-328)||(28610808-28610923)
chr6 (36-129)||(8064880-8064974)
chr6 (36-134)||(13531869-13531967)
chr6 (1-35)||(15101100-15101134)
chr6 (174-264)||(28633200-28633289)
chr6 (269-346)||(12147836-12147913)
chr6 (52-129)||(31945070-31945147)
chr6 (306-346)||(4563046-4563086)
chr6 (4-35)||(18494470-18494501)
chr6 (38-129)||(19134703-19134794)
chr6 (1-40)||(30539501-30539540)
chr6 (1-35)||(1744831-1744865)
chr6 (1-35)||(11313371-11313405)
chr6 (1-35)||(11316924-11316958)
chr6 (1-35)||(12134472-12134506)
chr6 (1-35)||(16876819-16876853)
chr6 (1-35)||(16876999-16877033)
chr6 (89-135)||(16971405-16971451)
chr6 (1-35)||(19712393-19712427)
chr6 (1-35)||(21089152-21089186)
chr6 (1-35)||(24055098-24055132)
chr6 (1-35)||(24558869-24558903)
chr6 (1-35)||(26098423-26098457)
chr6 (1-35)||(28149874-28149908)
chr6 (1-35)||(30526919-30526953)
chr6 (94-135)||(4577478-4577519)
chr6 (1-34)||(12124694-12124727)
chr6 (306-346)||(4577277-4577317)
chr6 (1-37)||(27914313-27914349)
[»] chr3 (72 HSPs)
chr3 (36-353)||(55467239-55467557)
chr3 (165-373)||(2566060-2566267)
chr3 (36-373)||(25918850-25919187)
chr3 (36-336)||(22255894-22256197)
chr3 (36-373)||(26758376-26758715)
chr3 (175-373)||(54122468-54122667)
chr3 (146-373)||(27054226-27054458)
chr3 (43-373)||(45629341-45629671)
chr3 (215-373)||(38651764-38651924)
chr3 (43-361)||(45914805-45915129)
chr3 (174-369)||(4280436-4280633)
chr3 (175-373)||(37045461-37045655)
chr3 (174-361)||(42362954-42363140)
chr3 (36-135)||(8355716-8355814)
chr3 (175-366)||(44651118-44651307)
chr3 (175-353)||(46253188-46253362)
chr3 (269-346)||(55129913-55129990)
chr3 (174-343)||(4668908-4669077)
chr3 (181-366)||(5640471-5640653)
chr3 (215-373)||(4554842-4555001)
chr3 (218-373)||(8557729-8557884)
chr3 (185-366)||(50578746-50578926)
chr3 (254-369)||(48167420-48167533)
chr3 (174-369)||(21562707-21562898)
chr3 (174-346)||(22472801-22472975)
chr3 (306-370)||(25465956-25466019)
chr3 (36-240)||(48168951-48169158)
chr3 (36-135)||(46253042-46253147)
chr3 (50-135)||(38681602-38681687)
chr3 (174-343)||(10481354-10481526)
chr3 (303-346)||(20038561-20038604)
chr3 (216-337)||(21238219-21238342)
chr3 (1-36)||(22339822-22339857)
chr3 (1-36)||(26366812-26366847)
chr3 (174-272)||(2832122-2832219)
chr3 (175-215)||(8355633-8355673)
chr3 (175-310)||(17144471-17144606)
chr3 (279-346)||(25858366-25858434)
chr3 (1-36)||(21832187-21832222)
chr3 (275-346)||(30739466-30739537)
chr3 (36-135)||(42362816-42362915)
chr3 (1-36)||(50203845-50203880)
chr3 (1-36)||(51642416-51642451)
chr3 (1-35)||(4029633-4029667)
chr3 (1-35)||(4256000-4256034)
chr3 (1-35)||(9264075-9264109)
chr3 (1-35)||(9264282-9264316)
chr3 (1-35)||(21750556-21750590)
chr3 (1-35)||(22407430-22407464)
chr3 (1-35)||(22407637-22407671)
chr3 (1-35)||(35011738-35011772)
chr3 (1-35)||(35011945-35011979)
chr3 (182-272)||(36330420-36330509)
chr3 (1-35)||(44573720-44573754)
chr3 (1-35)||(44574017-44574051)
chr3 (1-35)||(48685301-48685335)
chr3 (1-35)||(50057110-50057144)
chr3 (1-35)||(50057240-50057274)
chr3 (1-35)||(50057370-50057404)
chr3 (1-35)||(50692404-50692438)
chr3 (1-35)||(50692607-50692641)
chr3 (1-35)||(51338392-51338426)
chr3 (1-35)||(51642624-51642658)
chr3 (94-135)||(2832040-2832081)
chr3 (1-38)||(16078849-16078886)
chr3 (216-272)||(34635623-34635679)
chr3 (94-135)||(44651349-44651390)
chr3 (293-346)||(51194396-51194449)
chr3 (35-79)||(2565897-2565941)
chr3 (183-227)||(3300351-3300395)
chr3 (1-33)||(4191113-4191145)
chr3 (1-33)||(21832682-21832714)
[»] chr1 (83 HSPs)
chr1 (36-373)||(27507109-27507447)
chr1 (38-373)||(26344647-26344983)
chr1 (38-373)||(6248228-6248557)
chr1 (175-369)||(34914283-34914476)
chr1 (174-373)||(12973716-12973913)
chr1 (36-373)||(52380329-52380668)
chr1 (221-373)||(40095195-40095346)
chr1 (248-373)||(16063003-16063126)
chr1 (175-353)||(36782110-36782287)
chr1 (176-346)||(25507052-25507221)
chr1 (165-366)||(27350794-27350982)
chr1 (174-373)||(8165280-8165477)
chr1 (226-368)||(3935612-3935753)
chr1 (174-310)||(25559756-25559892)
chr1 (36-135)||(6693700-6693799)
chr1 (174-346)||(44055906-44056079)
chr1 (41-131)||(26063814-26063904)
chr1 (182-366)||(32910115-32910292)
chr1 (174-346)||(35375341-35375512)
chr1 (43-135)||(40094770-40094862)
chr1 (175-348)||(25865752-25865911)
chr1 (175-345)||(19051293-19051466)
chr1 (175-286)||(36797797-36797908)
chr1 (252-346)||(16537637-16537732)
chr1 (36-135)||(18310353-18310452)
chr1 (36-135)||(18834158-18834257)
chr1 (245-346)||(9249903-9250005)
chr1 (174-346)||(11536969-11537144)
chr1 (188-344)||(39158059-39158214)
chr1 (38-135)||(3937147-3937243)
chr1 (175-323)||(11073108-11073256)
chr1 (218-354)||(18310107-18310244)
chr1 (235-346)||(23474901-23475013)
chr1 (210-261)||(6694207-6694258)
chr1 (182-343)||(32937811-32937973)
chr1 (229-346)||(9330563-9330681)
chr1 (253-346)||(39167082-39167176)
chr1 (174-286)||(10847264-10847376)
chr1 (227-370)||(41751298-41751438)
chr1 (50-135)||(50471485-50471570)
chr1 (72-135)||(16063197-16063260)
chr1 (307-362)||(51231923-51231977)
chr1 (304-369)||(25532869-25532933)
chr1 (253-348)||(15881955-15882048)
chr1 (1-37)||(21638253-21638289)
chr1 (306-346)||(29923166-29923206)
chr1 (257-344)||(50310789-50310877)
chr1 (174-266)||(50951775-50951866)
chr1 (314-369)||(382218-382272)
chr1 (1-36)||(4022113-4022148)
chr1 (36-135)||(8269032-8269131)
chr1 (38-133)||(9330787-9330882)
chr1 (303-362)||(27770069-27770127)
chr1 (38-129)||(35979874-35979965)
chr1 (181-272)||(35992341-35992431)
chr1 (304-371)||(52828970-52829036)
chr1 (1-35)||(2997045-2997079)
chr1 (1-35)||(9380981-9381015)
chr1 (174-272)||(9961922-9962019)
chr1 (1-35)||(15392185-15392219)
chr1 (175-217)||(16063125-16063167)
chr1 (174-272)||(17989293-17989390)
chr1 (1-35)||(19481381-19481415)
chr1 (1-35)||(20735603-20735637)
chr1 (36-135)||(25559614-25559715)
chr1 (1-35)||(25799265-25799299)
chr1 (1-35)||(29273055-29273089)
chr1 (1-35)||(29273214-29273248)
chr1 (1-35)||(33879767-33879801)
chr1 (1-35)||(33964454-33964488)
chr1 (1-35)||(35926237-35926271)
chr1 (1-35)||(43361541-43361575)
chr1 (2-35)||(9381181-9381214)
chr1 (1-34)||(15392106-15392139)
chr1 (1-42)||(17419868-17419909)
chr1 (38-135)||(25507263-25507360)
chr1 (1-38)||(34076683-34076720)
chr1 (174-242)||(17652024-17652091)
chr1 (1-37)||(19937030-19937066)
chr1 (1-33)||(22892424-22892456)
chr1 (174-202)||(36203186-36203214)
chr1 (294-346)||(39185450-39185502)
chr1 (1-37)||(49828738-49828774)
[»] chr2 (35 HSPs)
chr2 (227-346)||(5862458-5862577)
chr2 (175-373)||(11678145-11678343)
chr2 (175-373)||(11695623-11695821)
chr2 (175-366)||(44085642-44085832)
chr2 (176-366)||(30514681-30514870)
chr2 (175-266)||(11377398-11377488)
chr2 (284-373)||(41461225-41461314)
chr2 (175-272)||(11051146-11051241)
chr2 (36-120)||(12884775-12884859)
chr2 (304-359)||(27962526-27962580)
chr2 (174-272)||(1331242-1331339)
chr2 (38-136)||(12041190-12041288)
chr2 (1-35)||(20998978-20999012)
chr2 (1-35)||(25621274-25621308)
chr2 (1-35)||(34775438-34775472)
chr2 (36-135)||(13194291-13194388)
chr2 (174-357)||(15320327-15320514)
chr2 (306-346)||(30759490-30759530)
chr2 (306-346)||(30761605-30761645)
chr2 (1-36)||(23054407-23054442)
chr2 (1-35)||(883931-883965)
chr2 (1-35)||(21214190-21214224)
chr2 (57-135)||(22014346-22014424)
chr2 (1-35)||(31761213-31761247)
chr2 (1-35)||(32667264-32667298)
chr2 (1-35)||(33985760-33985794)
chr2 (1-35)||(42768323-42768357)
chr2 (1-35)||(43195865-43195899)
chr2 (174-215)||(5862395-5862436)
chr2 (174-266)||(17763002-17763092)
chr2 (2-35)||(29923380-29923413)
chr2 (309-346)||(43452327-43452364)
chr2 (306-346)||(11651030-11651070)
chr2 (306-346)||(28790696-28790736)
chr2 (95-135)||(36075860-36075899)
[»] scaffold0015 (1 HSPs)
scaffold0015 (182-373)||(62561-62752)
[»] scaffold0210 (4 HSPs)
scaffold0210 (182-241)||(20377-20436)
scaffold0210 (182-241)||(28269-28328)
scaffold0210 (73-133)||(20266-20326)
scaffold0210 (73-133)||(28158-28218)
[»] scaffold0989 (1 HSPs)
scaffold0989 (1-35)||(2936-2970)
[»] scaffold0001 (1 HSPs)
scaffold0001 (89-135)||(428032-428078)
[»] scaffold0059 (1 HSPs)
scaffold0059 (290-342)||(17787-17839)


Alignment Details
Target: chr7 (Bit Score: 216; Significance: 1e-118; HSPs: 56)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 36 - 376
Target Start/End: Complemental strand, 22299016 - 22298676
Alignment:
Q  36 caaaccaaaccaatccgcaatataagaaaagcacttattaaatatctatcatctaaatcaatactcataaaaattcaatgaaaactttaataaaatgaca 135  Q
    ||||||||||||||||| |||||||||||| |||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||    
T  22299016 caaaccaaaccaatccgtaatataagaaaaacactaattaaatatctatcatctaaatcaatactcatagaaattcaatgaaaactttaacaaaatgaca 22298917  T
Q  136 annnnnnnncttctgttgttaagtttcttttttgct------agcaaaaatgtatttatgtgctacttgaactcttcgataatgattaaaattttagtct 229  Q
    |         |||| |||||||||||||||||||||      | ||||||| |||||||||| | ||||||||||||||||||||||||| |||||||||    
T  22298916 atttt-----ttctcttgttaagtttcttttttgctttttctatcaaaaatttatttatgtggtccttgaactcttcgataatgattaaa-ttttagtct 22298823  T
Q  230 tttgtatttcttatcaaataggattactttttgtccatgttttattttggtctatgtagttgagaacattgtcggatgaaaataaaattgtaatgttgga 329  Q
    |||||||||||||||||||||||||||||||||| || |||||| ||||||||||||||||| ||||||||| |||||||||||||||||||||||||||    
T  22298822 tttgtatttcttatcaaataggattactttttgttcacgttttaatttggtctatgtagttgggaacattgttggatgaaaataaaattgtaatgttgga 22298723  T
Q  330 taaaatttaaaacattgcttaaaaatatgttgtgttttagctttcct 376  Q
    | |||||||||||||||||| ||||||||||||||||||||||||||    
T  22298722 tgaaatttaaaacattgcttgaaaatatgttgtgttttagctttcct 22298676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 36 - 373
Target Start/End: Original strand, 11834060 - 11834399
Alignment:
Q  36 caaaccaaaccaatccgcaatataagaaaagcacttattaaatatctatcatctaaatcaatactcataaaaattcaatgaaaactttaataaaatgaca 135  Q
    ||||||||||||| ||||||||||||||||  | | ||||||||| ||||||||  | ||||||||||| |||||||||| |||||||||||| ||||||    
T  11834060 caaaccaaaccaaaccgcaatataagaaaaatattaattaaatatatatcatcttgaccaatactcatagaaattcaatggaaactttaataatatgaca 11834159  T
Q  136 annnnnnnncttctgttgttaagtttcttttttg------ctagcaaaaatgtatttatgtgctacttgaactcttcgataatgattaaaattttagtct 229  Q
              |||| ||| |||||||||| ||||      ||| ||||||| ||||||||||||||||||||||||  | ||||||||||||||||||||    
T  11834160 tcttttt---ttctcttgctaagtttcttctttgttttttctatcaaaaatatatttatgtgctacttgaactcttaaagaatgattaaaattttagtct 11834256  T
Q  230 tttgtatttcttatcaaataggattactttttgtccatgttttattttggtctatgtagttgagaacattgtcggatgaaaataaaattgtaatgttgga 329  Q
    |||||||||||||  ||||| ||||||||||||||||  ||||| ||||||||| ||| ||| ||||||||| |||||||||||||| ||||||||||||    
T  11834257 tttgtatttcttacaaaatatgattactttttgtccagattttaatttggtctacgtaattgggaacattgttggatgaaaataaaactgtaatgttgga 11834356  T
Q  330 taaaatttaaaacattgcttaaaaatatgttgtgttttagcttt 373  Q
    ||||||||||||||||| || |||||||||||||||||||||||    
T  11834357 taaaatttaaaacattg-ttgaaaatatgttgtgttttagcttt 11834399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 73 - 373
Target Start/End: Original strand, 10338435 - 10338742
Alignment:
Q  73 ttaaatatctatcatctaaatcaatactcataaaaattcaatgaaaactttaataaaatgacaannnnnnnncttctgttgttaagtttcttttttgct- 171  Q
    |||||||| ||||||||| |||||||||| ||||||||||||| |||||||||||||||||||          |||| |||||||| |||||  |||||     
T  10338435 ttaaatatatatcatctagatcaatactcgtaaaaattcaatggaaactttaataaaatgacatttttttt--ttctcttgttaagattcttcattgctt 10338532  T
Q  172 ---------agcaaaaatgtatttatgtgctacttgaactcttcgataatgattaaaattttagtcttttgtatttcttatcaaataggattactttttg 262  Q
             |  ||||||||||||||||||||||||||||||| || ||| | ||||||||||||||||||||| |||||  ||||| ||||||||||||    
T  10338533 tttctataaaaaaaaaatgtatttatgtgctacttgaactcttagagaataactaaaattttagtcttttgtatctcttacaaaatatgattactttttg 10338632  T
Q  263 tccatgttttattttggtctatgtagttgagaacattgtcggatgaaaataaaattgtaatgttggataaaatttaaaacattgcttaaaaatatgttgt 362  Q
    |||| |||||| ||| ||||| ||||||| ||||||||| ||||| |||||||||| |||| |||||| ||||| ||||||||| ||  |||||||||||    
T  10338633 tccacgttttaattttgtctaagtagttgggaacattgttggatggaaataaaattctaatattggatgaaattgaaaacattg-ttggaaatatgttgt 10338731  T
Q  363 gttttagcttt 373  Q
    ||| |||||||    
T  10338732 gttatagcttt 10338742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 36 - 373
Target Start/End: Complemental strand, 20335078 - 20334731
Alignment:
Q  36 caaaccaaaccaatccgcaatataagaaaagcacttattaaatatctatcatctaaatcaatactcataaaaattcaatgaaaactttaataaaatgaca 135  Q
    ||||||||| ||| || ||||||||||||| |||| ||||||| | ||||| ||| | ||||||||||| |||||||||||||||||||||||| |||||    
T  20335078 caaaccaaatcaaaccacaatataagaaaaacactaattaaatgtatatcacctagaccaatactcatagaaattcaatgaaaactttaataaattgaca 20334979  T
Q  136 annnnnnnncttctgttgttaagtttcttttttgct------agcaaaaatgtatttatgtgctacttgaactcttcgataatgattaaaatt------- 222  Q
              |||| |||||| ||||||||||||||      | |||||||||||||| ||||||| ||||||||  || |||||| ||||             
T  20334978 tatttt----ttctcttgttatgtttcttttttgctttttcgatcaaaaatgtatttacgtgctacatgaactctcggaaaatgataaaaaaaaaaaaaa 20334883  T
Q  223 --ttagtcttttgtatttcttatcaaataggattactttttgtccatgttttattttggtctatgtagttgagaacattgtcggatgaaaataaaattgt 320  Q
      ||||||||||||||||||||  ||||||||||||||||||| || |||||| ||| |||||  || |  |||||||||| |||| |||||||||||||    
T  20334882 aattagtcttttgtatttcttacaaaataggattactttttgtgcacgttttaatttagtctacataatacagaacattgttggataaaaataaaattgt 20334783  T
Q  321 aatgttggataaaatttaaaacattgcttaaaaatatgttgtgttttagcttt 373  Q
    |||||||||| |||||||||||||||| | ||| ||||||| |||||| ||||    
T  20334782 aatgttggatcaaatttaaaacattgc-tgaaattatgttgggttttaacttt 20334731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 36 - 371
Target Start/End: Original strand, 8568146 - 8568477
Alignment:
Q  36 caaaccaaaccaatccgcaatataagaaaagcacttattaaatatctatcatctaaatcaatactcataaaaattcaatgaaaactttaataaaatgaca 135  Q
    ||||||||||||| |||||||||||||||| |||| ||||||||| ||||||| | | |||| |||||| |||||||||| |||||||||||||||||||    
T  8568146 caaaccaaaccaaaccgcaatataagaaaaacactaattaaatatatatcatcaagaccaatgctcatagaaattcaatggaaactttaataaaatgaca 8568245  T
Q  136 annnnnnnncttctgttgttaag--tttcttttttgc--------tagcaaaaatgtatttatgtgctacttgaactcttcgataatgattaaaatttta 225  Q
              |||  ||||||||  |||||| |||||        ||  |||||||||||||||| | ||| ||||| || || |||||||||||||| |    
T  8568246 taatttttttttc--ttgttaagtttttcttctttgctttttctgtaaaaaaaatgtatttatgtacaactagaacttttagagaatgattaaaatttca 8568343  T
Q  226 gtcttttgtatttcttatcaaataggattactttttgtccatgttttattttggtctatgtagttgagaacattgtcggatgaaaataaaattgtaatgt 325  Q
    |||||||||||||||||  ||||| |||||||||||| ||| |||||| |||          |||| |||||||||  |||| |||||||||||||||||    
T  8568344 gtcttttgtatttcttacaaaataagattactttttgcccacgttttaattt----------gttgggaacattgt-tgatggaaataaaattgtaatgt 8568432  T
Q  326 tggataaaatttaaaacattgcttaaaaatatgttgtgttttagct 371  Q
    ||||| |||||||||| |||| || ||||| |||||||||||||||    
T  8568433 tggatgaaatttaaaaaattg-tttaaaatttgttgtgttttagct 8568477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 43 - 373
Target Start/End: Complemental strand, 1812958 - 1812628
Alignment:
Q  43 aaccaatccgcaatataagaaaagcacttattaaatatctatcatctaaatcaatactcataaaaattcaatgaaaactttaataaaatgacaannnnnn 142  Q
    |||||| ||||||||||| |||| |||| ||||||||| ||| ||||| | ||||||||||| |||||||||||||| |||||||||||||||           
T  1812958 aaccaaaccgcaatataaaaaaaacactaattaaatatatattatctagaccaatactcatagaaattcaatgaaaattttaataaaatgacatatttt- 1812860  T
Q  143 nncttctgttgttaagtttcttttttgct------agcaaaaatgtatttatgtgctacttgaactcttcgataatgattaaaattttagtcttttgtat 236  Q
       |||| ||||| |||||||| ||||||      | ||||||  ||||||||  |||||||||||| | || ||||||||||| ||||| ||||  |||    
T  1812859 ---ttctcttgttgagtttcttctttgctttttctatcaaaaagatatttatgcactacttgaactcctagagaatgattaaaactttagcctttcttat 1812763  T
Q  237 ttcttatcaaataggattactttttgtccatgttttattttggtctatgtagttgagaacattgtcggatgaaaataaaattgtaatgttggataaaatt 336  Q
    || |||  ||||||||||| |||||||| |  ||||| |||| |||| || |||| ||||||| |   ||| |||||||||||||||||||||| ||||     
T  1812762 ttattacgaaataggattagtttttgtctacattttaatttgatctacgttgttgggaacattat-tcatggaaataaaattgtaatgttggatgaaatc 1812664  T
Q  337 taaaacattgcttaaaaatatgttgtgttttagcttt 373  Q
    ||||||| || || |||||||||||||||||| ||||    
T  1812663 taaaacactg-ttgaaaatatgttgtgttttaacttt 1812628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 178 - 373
Target Start/End: Complemental strand, 7697630 - 7697436
Alignment:
Q  178 aatgtatttatgtgctacttgaactcttcgataatgattaaaattttagtcttttgtatttcttatcaaataggattactttttgtccatgttttatttt 277  Q
    |||||||||||||| ||||||||||||| |  |||||| |||| |||| ||||||  ||||||||  || | |||||||||||| |||| |||||| |||    
T  7697630 aatgtatttatgtgttacttgaactcttagggaatgataaaaaatttaatctttttaatttcttacaaagttggattactttttttccacgttttaattt 7697531  T
Q  278 ggtctatgtagttgagaacattgtcggatgaaaataaaattgtaatgttggataaaatttaaaacattgcttaaaaatatgttgtgttttagcttt 373  Q
    |||||| ||||||| ||||||| |  | | ||||||||| ||||||||||||| ||||||| |||||||| | |||||||||||||||||| ||||    
T  7697530 ggtctacgtagttgggaacattatttggtcaaaataaaactgtaatgttggatgaaatttataacattgc-tgaaaatatgttgtgttttatcttt 7697436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 182 - 373
Target Start/End: Complemental strand, 48643125 - 48642935
Alignment:
Q  182 tatttatgtgctacttgaactcttcgataatgattaaaattttagtcttttgtatttcttatcaaataggattactttttgtccatg-ttttattttggt 280  Q
    ||||||||||||||||||  | || || |||||| ||||| ||||||||||||||||||||  ||||| |||||| ||||||||||| |||||  |||||    
T  48643125 tatttatgtgctacttgattttttagagaatgat-aaaatcttagtcttttgtatttcttacaaaatatgattacgttttgtccatgtttttaacttggt 48643027  T
Q  281 ctatgtagttgagaacattgtcggatgaaaataaaattgtaatgttggataaaatttaaaacattgcttaaaaatatgttgtgttttagcttt 373  Q
    |||||| ||||  ||||||||   |||||||| |||||||||| || ||| |||||||||||||||| |  ||||||| ||||||| ||||||    
T  48643026 ctatgttgttggaaacattgtaaaatgaaaatgaaattgtaatatttgatgaaatttaaaacattgc-tgtaaatatggtgtgtttaagcttt 48642935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 174 - 373
Target Start/End: Original strand, 8118018 - 8118216
Alignment:
Q  174 caaaaatgtatttatgtgctacttgaactcttcgataatgattaaaattttagtcttttgtatttcttatcaaataggattacttttt-gtccatgtttt 272  Q
    |||||| ||||||||||||||||||| || || ||||||   |||||| ||| ||||||||||||||||  ||||| ||||||||||| || ||||||||    
T  8118018 caaaaacgtatttatgtgctacttgatcttttagataata--taaaatcttaatcttttgtatttcttacaaaatatgattacttttttgttcatgtttt 8118115  T
Q  273 -attttggtctatgtagttgagaacattgtcggatgaaaataaaattgtaatgttggataaaatttaaaacattgcttaaaaatatgttgtgttttagct 371  Q
     |  ||||||||||| ||||  |||||| |   |||||||| ||||||||||| | ||| |||||||||||||||| | |||||||||||||||| ||||    
T  8118116 taacttggtctatgttgttggaaacattataaaatgaaaattaaattgtaatgcttgatgaaatttaaaacattgc-tgaaaatatgttgtgtttcagct 8118214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 36 - 345
Target Start/End: Original strand, 27100200 - 27100510
Alignment:
Q  36 caaaccaaaccaatccgcaatataagaaaagcacttattaaatatctatcatctaaatcaatactcataaaaattcaatgaaaactttaataaaatgaca 135  Q
    ||||||||||||| |||||||||||||||| ||||  |||||||| |||||  || | ||||||| ||| |||||||||||||||||||||||||||||     
T  27100200 caaaccaaaccaaaccgcaatataagaaaaacactctttaaatatatatcacttataccaatacttatataaattcaatgaaaactttaataaaatgac- 27100298  T
Q  136 annnnnnnncttctgttgttaagtttctt------ttttgctagcaaaaatgtatttatgtgctacttgaactcttcgataatgattaaaa-ttttagtc 228  Q
              || | ||||||||||||||      |||| ||  | ||||| ||||||| |||||||||||||||| || ||| |||||||  |||||||    
T  27100299 ----ttttttttttcttgttaagtttcttctttgctttttctttccaaaatatatttatatgctacttgaactcttagaaaat-attaaaacatttagtc 27100393  T
Q  229 ttttgtatttcttatcaaataggattactttttgtccatgttttattttggtctatgtagttgagaacattgtcggatgaaaataaaattgtaatgttgg 328  Q
    ||||||||||||||  |||| |  ||||||||||||  ||||||| ||||| |||  || ||||||||| | |   || | ||||||||  |||||||||    
T  27100394 ttttgtatttcttacaaaattgagttactttttgtctgtgttttaatttggcctacataattgagaacactattatataataataaaataataatgttgg 27100493  T
Q  329 ataaaatttaaaacatt 345  Q
    || ||||||||||||||    
T  27100494 atgaaatttaaaacatt 27100510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 36 - 345
Target Start/End: Complemental strand, 27178103 - 27177793
Alignment:
Q  36 caaaccaaaccaatccgcaatataagaaaagcacttattaaatatctatcatctaaatcaatactcataaaaattcaatgaaaactttaataaaatgaca 135  Q
    ||||||||||||| |||||||||||||||| ||||  |||||||| |||||  || | ||||||| ||| |||||||||||||||||||||||||||||     
T  27178103 caaaccaaaccaaaccgcaatataagaaaaacactctttaaatatatatcacttataccaatacttatataaattcaatgaaaactttaataaaatgac- 27178005  T
Q  136 annnnnnnncttctgttgttaagtttctt------ttttgctagcaaaaatgtatttatgtgctacttgaactcttcgataatgattaaaa-ttttagtc 228  Q
              || | ||||||||||||||      |||| ||  | ||||| ||||||| |||||||||||||||| || ||| |||||||  |||||||    
T  27178004 ----ttttttttttcttgttaagtttcttctttgctttttctttccaaaatatatttatatgctacttgaactcttagaaaat-attaaaacatttagtc 27177910  T
Q  229 ttttgtatttcttatcaaataggattactttttgtccatgttttattttggtctatgtagttgagaacattgtcggatgaaaataaaattgtaatgttgg 328  Q
    ||||||||||||||  |||| |  ||||||||||||  ||||||| ||||| |||  || ||||||||| | |   || | ||||||||  |||||||||    
T  27177909 ttttgtatttcttacaaaattgagttactttttgtctgtgttttaatttggcctacataattgagaacactattatataataataaaataataatgttgg 27177810  T
Q  329 ataaaatttaaaacatt 345  Q
    || ||||||||||||||    
T  27177809 atgaaatttaaaacatt 27177793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 174 - 353
Target Start/End: Complemental strand, 34751336 - 34751159
Alignment:
Q  174 caaaaatgtatttatgtgctacttgaactcttcgataatgattaaaattttagtcttttgtatttcttatcaaataggattactttttgtccatgtttta 273  Q
    |||||||||||||||| | ||||||||||||| |  |||||| |||| || ||| ||||||||| ||||  |||| | ||||||||||||||| |||| |    
T  34751336 caaaaatgtatttatgcgttacttgaactcttggggaatgataaaaaattcagt-ttttgtattccttacgaaattgaattactttttgtccaagtttaa 34751238  T
Q  274 ttttggtctatgtagttgagaacattgtcggatgaaaataaaattgtaatgttggataaaatttaaaacattgcttaaaa 353  Q
     || |||| |  |||||  ||| ||||| ||||||||||||||||||||||||| || ||||||||||||||||| ||||    
T  34751237 gtt-ggtccacatagtttggaatattgttggatgaaaataaaattgtaatgttgtatgaaatttaaaacattgctgaaaa 34751159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 217 - 373
Target Start/End: Original strand, 35819851 - 35820007
Alignment:
Q  217 aaaattttagtcttttgtatttcttatcaaataggattactttttgtccatgttttat-tttggtctatgtagttgagaacattgtcggatgaaaataaa 315  Q
    |||| |||||||||||||| || |||  ||||   ||||||||||||||| |||| |  |||||| || ||||||| | |||||||  ||||||||||||    
T  35819851 aaaaatttagtcttttgtaatttttacaaaatttaattactttttgtccacgtttaaactttggtgtacgtagttgggtacattgtttgatgaaaataaa 35819950  T
Q  316 attgtaatgttggataaaatttaaaacattgcttaaaaatatgttgtgttttagcttt 373  Q
    || |||||||||||| |||||||||||||||| | ||||||| |||||||||| ||||    
T  35819951 atcgtaatgttggatgaaatttaaaacattgc-tgaaaatatattgtgttttatcttt 35820007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 182 - 366
Target Start/End: Complemental strand, 37375665 - 37375482
Alignment:
Q  182 tatttatgtgctacttgaactcttcgataatgattaaaattttagtcttttgtatttcttatcaaataggattactttttgtccatgtttt-attttggt 280  Q
    |||||||| |||||||||| | || || |||||  ||||| ||||||||||| |||||| |  |||||| ||||  ||||||||||||||| |  |||||    
T  37375665 tatttatgcgctacttgaaattttagagaatgag-aaaatcttagtcttttgcatttctaacaaaatagaattatattttgtccatgtttttaacttggt 37375567  T
Q  281 ctatgtagttgagaacattgtcggatgaaaataaaattgtaatgttggataaaatttaaaacattgcttaaaaatatgttgtgttt 366  Q
    |||||| ||||  ||||||||   |||||||| |||||||||| || ||| ||||||||||||||| || ||||||||||||||||    
T  37375566 ctatgttgttggaaacattgtaaaatgaaaatgaaattgtaatatttgatgaaatttaaaacattg-ttgaaaatatgttgtgttt 37375482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 175 - 373
Target Start/End: Original strand, 31287515 - 31287700
Alignment:
Q  175 aaaaatgtatttatgtgctacttgaactcttcgataatgattaaaattttagtcttttgtatttcttatcaaataggattactttttgtccatgttttat 274  Q
    ||||||||||||||||||||||| ||||||| || | |||| |||| | ||||||||||||||||| |  |||||||||||||| ||||  | ||||       
T  31287515 aaaaatgtatttatgtgctactttaactcttagagattgataaaaaatgtagtcttttgtatttctgacaaaataggattacttgttgtgaacgttt--- 31287611  T
Q  275 tttggtctatgtagttgagaacattgtcggatgaaaataaaattgtaatgttggataaaatttaaaacattgcttaaaaatatgttgtgttttagcttt 373  Q
              ||| ||  ||| ||||| ||||||||||| |||||||||||||||||||||||||||| |||| | ||||||||||||| |||| ||||    
T  31287612 ---------cgtaatttggaatattgttggatgaaaatacaattgtaatgttggataaaatttaaaacgttgc-tgaaaatatgttgtggtttaacttt 31287700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 269 - 347
Target Start/End: Complemental strand, 16359412 - 16359334
Alignment:
Q  269 ttttattttggtctatgtagttgagaacattgtcggatgaaaataaaattgtaatgttggataaaatttaaaacattgc 347  Q
    ||||| |||||||||||| | || ||| ||||| |||||||||| ||||| ||||||||||||||||||||||||||||    
T  16359412 ttttaatttggtctatgttgatgggaatattgttggatgaaaatgaaattataatgttggataaaatttaaaacattgc 16359334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 38 - 346
Target Start/End: Complemental strand, 2734809 - 2734523
Alignment:
Q  38 aaccaaaccaatccgcaatataagaaaagcacttattaaatatctatcatctaaatcaatactcataaaaattcaatgaaaactttaataaaatgacaan 137  Q
    ||||||||||| || ||| | |||||||   || ||||||| | | ||||||| | ||||||||||| ||| |||||||| ||||| |||||||||||      
T  2734809 aaccaaaccaaaccacaacacaagaaaaatcctaattaaatctatgtcatctagaccaatactcatagaaactcaatgaatacttttataaaatgacata 2734710  T
Q  138 nnnnnnncttctgttgttaagtttcttttttgctagcaaaaatgtatttatgtgctacttgaactcttcgataatgattaaaattttagtcttttgtatt 237  Q
            |||| |||||||||||||||||       |||||| |||||| |||||| ||||||| || || |||||| ||||| ||||||||||  |||    
T  2734709 ttttt---ttctcttgttaagtttcttttta------aaaaatatatttacgtgctaattgaacttttagagaatgat-aaaatcttagtcttttacatt 2734620  T
Q  238 tcttatcaaataggattactttttgtccatgttttattttggtctatgtagttgagaacattgtcggatgaaaataaaattgtaatgttggataaaattt 337  Q
    |||||   |||| ||||||||||| ||||| ||||| |||||||||||| ||| ||            ||||||||||||||||||||||||| ||||||    
T  2734619 tcttacataataagattactttttatccatattttaatttggtctatgttgtttag------------tgaaaataaaattgtaatgttggatgaaattt 2734532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 36 - 135
Target Start/End: Original strand, 26208885 - 26208984
Alignment:
Q  36 caaaccaaaccaatccgcaatataagaaaagcacttattaaatatctatcatctaaatcaatactcataaaaattcaatgaaaactttaataaaatgaca 135  Q
    ||||| ||||||| ||||||  |||||||| ||||  |||||||| | ||||||||| ||||||||||| ||| |||| ||||||||| |||||||||||    
T  26208885 caaactaaaccaagccgcaacgtaagaaaaacactagttaaatatatgtcatctaaaccaatactcatagaaaatcaacgaaaacttttataaaatgaca 26208984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 36 - 134
Target Start/End: Original strand, 31287374 - 31287472
Alignment:
Q  36 caaaccaaaccaatccgcaatataagaaaagcacttattaaatatctatcatctaaatcaatactcataaaaattcaatgaaaactttaataaaatgac 134  Q
    ||||||||| ||| |||||||||||||||| |||| ||||||||| ||||| ||||| ||||||||||   ||||||||  || | |||||||||||||    
T  31287374 caaaccaaatcaaaccgcaatataagaaaaacactaattaaatatgtatcacctaaaccaatactcattggaattcaatagaatcattaataaaatgac 31287472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 174 - 346
Target Start/End: Complemental strand, 23729717 - 23729549
Alignment:
Q  174 caaaaatgtatttatgtgctacttgaactcttcgataatgattaaaattttagtcttttgtatttcttatcaaataggattactttttgtccatgtttta 273  Q
    |||||||||||| ||  |||||||||| | || |  |||| ||||||| ||||||||||||||||||||  ||||| ||||||||||||| || |||| |    
T  23729717 caaaaatgtattcatacgctacttgaatttttagtaaatg-ttaaaatcttagtcttttgtatttcttacaaaatatgattactttttgttcacgtttaa 23729619  T
Q  274 ttttggtctatgtagttgagaacattgtcggatgaaaataaaattgtaatgttggataaaatttaaaacattg 346  Q
     ||||||| ||||||||  ||| ||| |   |  ||||| |||||||||| |||||| |||||||||||||||    
T  23729618 atttggtccatgtagtttggaa-attttttaa--aaaatgaaattgtaatattggatgaaatttaaaacattg 23729549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 39 - 135
Target Start/End: Complemental strand, 25007742 - 25007648
Alignment:
Q  39 accaaaccaatccgcaatataagaaaagcacttattaaatatctatcatctaaatcaatactcataaaaattcaatgaaaactttaataaaatgaca 135  Q
    |||||||||| | |||||||||||||| || | |||||||||  ||||||||   ||||||||||| ||||| |||||||| |||||||||||||||    
T  25007742 accaaaccaaactgcaatataagaaaaacattaattaaatat--atcatctaggccaatactcatagaaattaaatgaaaattttaataaaatgaca 25007648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 175 - 365
Target Start/End: Complemental strand, 30855440 - 30855251
Alignment:
Q  175 aaaaatgtatttatgtgctacttgaactcttcgataatgattaaaattttagtcttttgtatttcttatcaaataggattactttttgtc--catgtttt 272  Q
    ||||| ||||||||||| |||| ||||| || || |||||| ||||| ||| | ||||| |||||| |  ||||| ||||| ||||||||  ||| ||||    
T  30855440 aaaaacgtatttatgtgttactcgaacttttagagaatgat-aaaatcttaatgttttgcatttctcacaaaatatgattattttttgtctgcat-tttt 30855343  T
Q  273 attttggtctatgtagttgagaacattgtcggatgaaaataaaattgtaatgttggataaaatttaaaacattgcttaaaaatatgttgtgtt 365  Q
    | |||||||||||| ||||  ||||||||   || ||| | ||||| ||||||| ||| |||||||||||||||| | |||||||||||||||    
T  30855342 aatttggtctatgttgttggaaacattgtaaaataaaatttaaattctaatgtttgatcaaatttaaaacattgc-tgaaaatatgttgtgtt 30855251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 269 - 373
Target Start/End: Original strand, 6879928 - 6880031
Alignment:
Q  269 ttttattttggtctatgtagttgagaacattgtcggatgaaaataaaattgtaatgttggataaaatttaaaacattgcttaaaaatatgttgtgtttta 368  Q
    ||||| |||||| ||| | |||| ||| |||||  |||||||||  |||| ||||||||||| ||||||||||||||| || ||||||||||||||||||    
T  6879928 ttttaatttggtttattttgttgggaatattgttagatgaaaatttaattttaatgttggatgaaatttaaaacattg-ttgaaaatatgttgtgtttta 6880026  T
Q  369 gcttt 373  Q
     ||||    
T  6880027 acttt 6880031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 305 - 373
Target Start/End: Original strand, 30079452 - 30079519
Alignment:
Q  305 atgaaaataaaattgtaatgttggataaaatttaaaacattgcttaaaaatatgttgtgttttagcttt 373  Q
    |||||||| |||||||||| || |||||||||||||||||||| | ||||||| |||||||||||||||    
T  30079452 atgaaaatgaaattgtaatatttgataaaatttaaaacattgc-tgaaaatatattgtgttttagcttt 30079519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 36 - 135
Target Start/End: Complemental strand, 7697782 - 7697678
Alignment:
Q  36 caaaccaaaccaatccgcaatataagaaaagcactta-ttaaatatctatcatctaaat----caatactcataaaaattcaatgaaaactttaataaaa 130  Q
    ||||||||||||| || ||||||||||||| |||||| |||||||| |||||  || ||    ||||||||||| ||| |||||||||||||||||||||    
T  7697782 caaaccaaaccaaaccacaatataagaaaaacacttaattaaatatatatcacatacatagaccaatactcatagaaactcaatgaaaactttaataaaa 7697683  T
Q  131 tgaca 135  Q
     ||||    
T  7697682 agaca 7697678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 151 - 272
Target Start/End: Complemental strand, 23675746 - 23675626
Alignment:
Q  151 ttgttaagtttcttttttgctagcaaaaatgtatttatgtgctacttgaactcttcgataatgattaaaattttagtcttttgtatttcttatcaaatag 250  Q
    ||||||||||| ||||||  |  ||||||||||||||| ||||| ||||||| || || ||||| |||||| ||| ||||||  |||| |||   |||||    
T  23675746 ttgttaagttttttttttcttttcaaaaatgtatttatatgctatttgaacttttagagaatga-taaaatcttaatcttttacatttattacataatag 23675648  T
Q  251 gattactttttgtccatgtttt 272  Q
    |||||||||||||||| |||||    
T  23675647 gattactttttgtccacgtttt 23675626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 38 - 135
Target Start/End: Complemental strand, 27456811 - 27456714
Alignment:
Q  38 aaccaaaccaatccgcaatataagaaaagcacttattaaatatctatcatctaaatcaatactcataaaaattcaatgaaaactttaataaaatgaca 135  Q
    ||||||||||| |||||| ||||||||| |||| ||||||| | | ||  ||| | ||||||||||| ||| ||||||||||||||  ||||||||||    
T  27456811 aaccaaaccaaaccgcaacataagaaaaacactaattaaatctatgtctcctagaccaatactcatagaaactcaatgaaaacttttgtaaaatgaca 27456714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 36 - 130
Target Start/End: Complemental strand, 35495893 - 35495799
Alignment:
Q  36 caaaccaaaccaatccgcaatataagaaaagcacttattaaatatctatcatctaaatcaatactcataaaaattcaatgaaaactttaataaaa 130  Q
    ||||||||||||| |||||||||||||||| |||| |||||| || | ||| ||| |||||||||  || ||  |||||| ||||||| ||||||    
T  35495893 caaaccaaaccaaaccgcaatataagaaaaacactaattaaacatatgtcacctagatcaatacttttagaatctcaatggaaacttttataaaa 35495799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 36 - 133
Target Start/End: Original strand, 8117879 - 8117976
Alignment:
Q  36 caaaccaaaccaatccgcaatataagaaaagcacttattaaatatctatcatctaaatcaatactcataaaaattcaatgaaaactttaataaaatga 133  Q
    ||||||||| ||| |||||| ||||||||| |  | |||||| || ||||| ||||| ||||||||||| ||| |||||| ||||| | |||||||||    
T  8117879 caaaccaaatcaaaccgcaacataagaaaaacgttaattaaaaatgtatcacctaaaccaatactcatataaactcaatggaaactcttataaaatga 8117976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 182 - 310
Target Start/End: Original strand, 22701082 - 22701209
Alignment:
Q  182 tatttatgtgctacttgaactcttcgataatgattaaaattttagtcttttgtatttcttatcaaataggattactttttgtccatgttttat-tttggt 280  Q
    ||||||| |||||||| |||| || || ||| || ||||| ||| ||||||| ||||||||  ||||| ||||||||||||| || ||||| | ||||||    
T  22701082 tatttatctgctacttaaacttttagagaataat-aaaatcttattcttttgcatttcttaa-aaatatgattactttttgtgcacgttttttatttggt 22701179  T
Q  281 ctatgtagttgagaacattgtcggatgaaa 310  Q
    |||||||||||| || | ||| ||||||||    
T  22701180 ctatgtagttgaaaaaaatgttggatgaaa 22701209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 297 - 346
Target Start/End: Complemental strand, 43908895 - 43908846
Alignment:
Q  297 attgtcggatgaaaataaaattgtaatgttggataaaatttaaaacattg 346  Q
    ||||| |||||||||||||||||||||||| ||| |||||| ||||||||    
T  43908895 attgttggatgaaaataaaattgtaatgtttgatcaaatttgaaacattg 43908846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 175 - 272
Target Start/End: Complemental strand, 46147555 - 46147459
Alignment:
Q  175 aaaaatgtatttatgtgctacttgaactcttcgataatgattaaaattttagtcttttgtatttcttatcaaataggattactttttgtccatgtttt 272  Q
    |||||| |||||||||||| |||||||| || || ||| || ||||| ||||||||||  ||||||||   ||||| ||||||||||||||| |||||    
T  46147555 aaaaatatatttatgtgctgcttgaacttttagacaataat-aaaatcttagtcttttacatttcttacataatagaattactttttgtccacgtttt 46147459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 177 - 301
Target Start/End: Complemental strand, 49012392 - 49012268
Alignment:
Q  177 aaatgtatttatgtgctacttgaactcttcgataatgattaaaattttagtcttttgtatttcttatcaaataggattactttttgtccatg-ttttatt 275  Q
    |||| ||||||||| ||| ||||||| ||| | |||||| ||||| ||  ||||||| ||||||||  |||||| ||||||||||||||| | ||||| |    
T  49012392 aaatatatttatgttctatttgaacttttcaagaatgat-aaaatcttgttcttttgcatttcttacaaaatagaattactttttgtccacgtttttaat 49012294  T
Q  276 ttggtctatgtagttgagaacattgt 301  Q
    || ||| |||||||||  ||||||||    
T  49012293 ttagtccatgtagttggaaacattgt 49012268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 227 - 306
Target Start/End: Complemental strand, 33434405 - 33434325
Alignment:
Q  227 tcttttgtatttcttatcaaataggattactttttgtccatgtttt-attttggtctatgtagttgagaacattgtcggat 306  Q
    ||||||| |||| |||  |||||| |||| ||||||| |||||||| | |||||||||||||||||| |||||||| ||||    
T  33434405 tcttttgcatttgttacaaaatagaattattttttgtgcatgtttttaatttggtctatgtagttgaaaacattgttggat 33434325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 36 - 135
Target Start/End: Complemental strand, 40849344 - 40849245
Alignment:
Q  36 caaaccaaaccaatccgcaatataagaaaagcacttattaaatatctatcatctaaatcaatactcataaaaattcaatgaaaactttaataaaatgaca 135  Q
    ||||||||||||| |||||| ||||||| | | || ||||||| | | ||||| | | ||||||||||| ||| |||||| ||||||| |||||| ||||    
T  40849344 caaaccaaaccaaaccgcaacataagaacaactctaattaaatctatgtcatcgagaccaatactcatagaaactcaatggaaacttttataaaacgaca 40849245  T

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Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 1663627 - 1663593
Alignment:
Q  1 ttttgtaaggatgagttaggcccccaatttcaaca 35  Q
    |||||||||||||||||||||||| ||||||||||    
T  1663627 ttttgtaaggatgagttaggccccaaatttcaaca 1663593  T

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Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 6783119 - 6783153
Alignment:
Q  1 ttttgtaaggatgagttaggcccccaatttcaaca 35  Q
    |||||||||||||||||||||||| ||||||||||    
T  6783119 ttttgtaaggatgagttaggccccaaatttcaaca 6783153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 37 - 135
Target Start/End: Original strand, 6879695 - 6879793
Alignment:
Q  37 aaaccaaaccaatccgcaatataagaaaagcacttattaaatatctatcatctaaatcaatactcataaaaattcaatgaaaactttaataaaatgaca 135  Q
    |||||||||||| |  |||  ||||||||  ||| |||||| || ||||| ||| |  |||||||||| ||  ||||||||||||||||||||||||||    
T  6879695 aaaccaaaccaaactacaacttaagaaaaatactaattaaacatatatcacctagactaatactcatagaagctcaatgaaaactttaataaaatgaca 6879793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 13310448 - 13310414
Alignment:
Q  1 ttttgtaaggatgagttaggcccccaatttcaaca 35  Q
    |||||||||||||||||||||||| ||||||||||    
T  13310448 ttttgtaaggatgagttaggccccaaatttcaaca 13310414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 23396690 - 23396724
Alignment:
Q  1 ttttgtaaggatgagttaggcccccaatttcaaca 35  Q
    |||||||||||||||||||||||| ||||||||||    
T  23396690 ttttgtaaggatgagttaggccccaaatttcaaca 23396724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 23821699 - 23821665
Alignment:
Q  1 ttttgtaaggatgagttaggcccccaatttcaaca 35  Q
    |||||||||||||||||||||||| ||||||||||    
T  23821699 ttttgtaaggatgagttaggccccaaatttcaaca 23821665  T

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Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 246 - 346
Target Start/End: Complemental strand, 32237941 - 32237839
Alignment:
Q  246 aataggattactttttgtccatgtttt-attttggtctatgtagttgagaacattgtcggatgaaaataaaattgtaatgttggataaaa-tttaaaaca 343  Q
    |||| |||||| ||||||||| ||||| | ||||||||||||  ||   |||||||| |||||||||| |||||||| | || ||||||| |||||||||    
T  32237941 aatatgattacattttgtccacgtttttaatttggtctatgttattagaaacattgttggatgaaaatgaaattgtattattagataaaaatttaaaaca 32237842  T
Q  344 ttg 346  Q
    |||    
T  32237841 ttg 32237839  T

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Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 33855566 - 33855600
Alignment:
Q  1 ttttgtaaggatgagttaggcccccaatttcaaca 35  Q
    |||||||||||||||||||||||| ||||||||||    
T  33855566 ttttgtaaggatgagttaggccccaaatttcaaca 33855600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 36 - 130
Target Start/End: Complemental strand, 34751476 - 34751383
Alignment:
Q  36 caaaccaaaccaatccgcaatataagaaaagcacttattaaatatctatcatctaaatcaatactcataaaaattcaatgaaaactttaataaaa 130  Q
    ||||||||| ||| |||||||||  ||||| |||| ||||||||| ||||| | | | ||||||| | ||||| |||||| ||||||||||||||    
T  34751476 caaaccaaatcaaaccgcaatattcgaaaaacactaattaaatatatatcacc-agaccaatacttaaaaaaactcaatggaaactttaataaaa 34751383  T

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Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 41670914 - 41670948
Alignment:
Q  1 ttttgtaaggatgagttaggcccccaatttcaaca 35  Q
    |||||||||||||||||||||||| ||||||||||    
T  41670914 ttttgtaaggatgagttaggccccaaatttcaaca 41670948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 174 - 259
Target Start/End: Complemental strand, 23033026 - 23032943
Alignment:
Q  174 caaaaatgtatttatgtgctacttgaactcttcgataatgattaaaattttagtcttttgtatttcttatcaaataggattacttt 259  Q
    ||||||| ||||||||||||||||||||| || || ||||| |||||| ||| |||||| |||||||||   ||||| ||||||||    
T  23033026 caaaaatatatttatgtgctacttgaact-ttagagaatga-taaaatcttaatcttttatatttcttacataatagaattacttt 23032943  T

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Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 257290 - 257258
Alignment:
Q  1 ttttgtaaggatgagttaggcccccaatttcaa 33  Q
    |||||||||||||||||||||||| ||||||||    
T  257290 ttttgtaaggatgagttaggccccaaatttcaa 257258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 306 - 346
Target Start/End: Original strand, 16535617 - 16535657
Alignment:
Q  306 tgaaaataaaattgtaatgttggataaaatttaaaacattg 346  Q
    ||||||| |||||||||| |||||| |||||||||||||||    
T  16535617 tgaaaatgaaattgtaattttggatgaaatttaaaacattg 16535657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 306 - 346
Target Start/End: Complemental strand, 16630045 - 16630005
Alignment:
Q  306 tgaaaataaaattgtaatgttggataaaatttaaaacattg 346  Q
    ||||||| |||||||||| |||||| |||||||||||||||    
T  16630045 tgaaaatgaaattgtaattttggatgaaatttaaaacattg 16630005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 306 - 346
Target Start/End: Original strand, 21237631 - 21237671
Alignment:
Q  306 tgaaaataaaattgtaatgttggataaaatttaaaacattg 346  Q
    ||||||| ||||||||||||||||| ||||| |||||||||    
T  21237631 tgaaaattaaattgtaatgttggatgaaattaaaaacattg 21237671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 51 - 119
Target Start/End: Complemental strand, 23675839 - 23675771
Alignment:
Q  51 cgcaatataagaaaagcacttattaaatatctatcatctaaatcaatactcataaaaattcaatgaaaa 119  Q
    ||||||||||||||| |||| ||||||| | | ||| |||||  |||||||||| ||| ||||||||||    
T  23675839 cgcaatataagaaaaacactaattaaatttatgtcacctaaactaatactcatagaaactcaatgaaaa 23675771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 306 - 346
Target Start/End: Complemental strand, 36550692 - 36550652
Alignment:
Q  306 tgaaaataaaattgtaatgttggataaaatttaaaacattg 346  Q
    ||||||||||||||||||||| ||| |||||| ||||||||    
T  36550692 tgaaaataaaattgtaatgttagatgaaattttaaacattg 36550652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 40703434 - 40703402
Alignment:
Q  1 ttttgtaaggatgagttaggcccccaatttcaa 33  Q
    |||||||||||||||||||||||| ||||||||    
T  40703434 ttttgtaaggatgagttaggccccaaatttcaa 40703402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 174 - 202
Target Start/End: Complemental strand, 43202760 - 43202732
Alignment:
Q  174 caaaaatgtatttatgtgctacttgaact 202  Q
    |||||||||||||||||||||||||||||    
T  43202760 caaaaatgtatttatgtgctacttgaact 43202732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 306 - 346
Target Start/End: Complemental strand, 47483847 - 47483807
Alignment:
Q  306 tgaaaataaaattgtaatgttggataaaatttaaaacattg 346  Q
    ||||||||||||| ||||||||||| |||||||||| ||||    
T  47483847 tgaaaataaaattttaatgttggatgaaatttaaaatattg 47483807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 306 - 374
Target Start/End: Original strand, 47646590 - 47646657
Alignment:
Q  306 tgaaaataaaattgtaatgttggataaaatttaaaacattgcttaaaaatatgttgtgttttagctttc 374  Q
    ||||||||||||| |||||||||   |||||||||||||||| || | |||||||||||| || |||||    
T  47646590 tgaaaataaaattttaatgttggtcgaaatttaaaacattgc-tagatatatgttgtgttgtaactttc 47646657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 150; Significance: 3e-79; HSPs: 76)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 37 - 373
Target Start/End: Complemental strand, 8485163 - 8484820
Alignment:
Q  37 aaaccaaaccaatccgcaatataagaaaagcacttattaaatatctatcatctaaatcaatactcataaaaattcaatgaaaactttaataaaatgacaa 136  Q
    |||||||||||| |||||||||||||||| |||| || |||||| |||| |||| | ||||||||||| |||||||||| |||||||||||||||||||     
T  8485163 aaaccaaaccaaaccgcaatataagaaaaacactaatcaaatatatatcctctagaccaatactcatagaaattcaatgtaaactttaataaaatgacat 8485064  T
Q  137 nnnnnnnnctt-ctgttgttaagtttcttttttgct------agcaaaaatgtatttatgtgctacttgaactcttcgataatgattaaaattttagtct 229  Q
             || || |||||||||||||| ||||||      | ||| ||||||||||| |||||||||||||||| || ||||||||||||||||||||    
T  8485063 tgttttttttttctcttgttaagtttcttctttgctttttctatcaataatgtatttatatgctacttgaactcttagagaatgattaaaattttagtct 8484964  T
Q  230 tttgtatttcttatcaaataggattactttttgtccatgttttattttggtctatgtagttgagaacattgtcggatgaaaataaaattgtaatgttgga 329  Q
    |||| ||||||||| ||||| ||||||||||||||||||||||| ||||||||| ||| ||||||| ||||| ||||| |||||||||||||||||||||    
T  8484963 tttgcatttcttataaaatatgattactttttgtccatgttttaatttggtctacgtatttgagaatattgttggatggaaataaaattgtaatgttgga 8484864  T
Q  330 taaaatttaaaacattgcttaaaaatatg-ttgtgttttagcttt 373  Q
    ||||| |||||||||||| | |||||||| |||||||||| ||||    
T  8484863 taaaagttaaaacattgc-tgaaaatatgtttgtgttttaacttt 8484820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 36 - 373
Target Start/End: Complemental strand, 4642933 - 4642595
Alignment:
Q  36 caaaccaaaccaatccgcaatataagaaaagcacttattaaatatctatcatctaaatcaatactcataaaaattcaatgaaaactttaataaaatgaca 135  Q
    |||||||| |||| |||||||||| |||||  ||| ||||||||| || ||| || | ||||||||||| |||| ||||| |||||||||||||| ||      
T  4642933 caaaccaatccaaaccgcaatatatgaaaaatactaattaaatatataccatttagaccaatactcatagaaatacaatggaaactttaataaaaaga-- 4642836  T
Q  136 annnnnnnncttctgttgttaagtttcttttttgct------agcaaaaatgtatttatgtgctacttgaactcttcgataatgattaaaattttagtct 229  Q
              |||| |||||||||||||| ||||||      | |||||||||||||||||||||| |||| |||| || ||||||||||||||| ||||    
T  4642835 -tttttttttttctcttgttaagtttcttctttgctttttctatcaaaaatgtatttatgtgctacatgaattcttagagaatgattaaaatttttgtct 4642737  T
Q  230 tttgtatttcttatcaaataggattactttttgtccatgttttattttggtctatgtagttgagaacattgtcggatgaaaataaaattgtaatgttgga 329  Q
    | |||||||||||| |||||||||||||||||||||| |||||| ||||||||| || |||| |||| ||||   |||||||||||||| ||||||||||    
T  4642736 tctgtatttcttataaaataggattactttttgtccacgttttaatttggtctacgttgttgggaactttgttttatgaaaataaaattataatgttgga 4642637  T
Q  330 taaaatttaaaacattgcttaaaaatatgttgtgttttagcttt 373  Q
    | |||||||||||| ||| |||||||||||||| ||||||||||    
T  4642636 tgaaatttaaaacactgc-taaaaatatgttgt-ttttagcttt 4642595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 36 - 373
Target Start/End: Complemental strand, 21069544 - 21069203
Alignment:
Q  36 caaaccaaaccaatccgcaatataagaaaagcacttattaaatatctatcatctaaatcaatactcataaaaattcaatgaaaactttaataaaatgaca 135  Q
    ||||||||||||| |||| ||||||||||| |||| ||||||||| | |||  || | |||||||| || ||| | ||||||||||||||||||||||||    
T  21069544 caaaccaaaccaaaccgcgatataagaaaaacactaattaaatatatgtcacttacaccaatactcgtataaacttaatgaaaactttaataaaatgaca 21069445  T
Q  136 annnnnnnncttctgttgttaagtttcttttttgctag------caaaaatgtatttatgtgctacttgaactcttcgataatgattaaaattttagtct 229  Q
              |||| |||||||||||||| ||||||        ||||||||||||||||| |||||||||||||| || |||||| |||| ||||||||    
T  21069444 tatgtttt--ttctcttgttaagtttcttctttgctttttgtttcaaaaatgtatttatgtactacttgaactcttagagaatgataaaaaatttagtct 21069347  T
Q  230 tttgtatttcttatcaaataggattactttttgtccatgttttattttggtctatgtagttgagaacattgtcggatgaaaataaaattgtaatgttgga 329  Q
    |||| ||||||||   |||| ||||||||||||||||  ||||| ||||||||| ||||||| | ||| ||| |||||||||||||||||||||||||||    
T  21069346 tttgcatttcttacataatatgattactttttgtccacattttaatttggtctacgtagttggggacactgttggatgaaaataaaattgtaatgttgga 21069247  T
Q  330 taaaattt-aaaacattgcttaaaaatatgttgtgttttagcttt 373  Q
    | |||||| ||||||||| || ||||||||| |||||||||||||    
T  21069246 ttaaatttaaaaacattg-ttgaaaatatgtagtgttttagcttt 21069203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 175 - 373
Target Start/End: Original strand, 23625637 - 23625834
Alignment:
Q  175 aaaaatgtatttatgtgctacttgaactcttcgataatgattaaaattttagtcttttgtatttcttatcaaataggattactttttgtccatgttttat 274  Q
    |||||||||||||| ||||||||||||||||  || ||||||| | |||||||||| |||||||||||| |||||| ||||||||||||||| ||||||     
T  23625637 aaaaatgtatttatctgctacttgaactcttaaatgatgattacatttttagtcttatgtatttcttataaaatagaattactttttgtccacgttttaa 23625736  T
Q  275 tttggtctatgtagttgagaacattgtcggatgaaaataaaattgtaatgttggataaaatttaaaacattgcttaaaaatatgttgtgttttagcttt 373  Q
    ||||||||| |||  || ||||||||| |||||||||||||||| ||||||||||| ||||||||||||||| || |||||||||||||||||| ||||    
T  23625737 tttggtctacgtatgtgtgaacattgttggatgaaaataaaattataatgttggattaaatttaaaacattg-ttgaaaatatgttgtgttttaacttt 23625834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 174 - 373
Target Start/End: Complemental strand, 27743546 - 27743348
Alignment:
Q  174 caaaaatgtatttatgtgctacttgaactcttcgataatgattaaaattttagtcttttgtatttcttatcaaataggattactttttgtccatgtttta 273  Q
    ||||||||||||||||| |||||||||||||| || |||||||||||||||| ||||||||||||||||  |||||||||||||||||||||  ||||      
T  27743546 caaaaatgtatttatgtactacttgaactcttagagaatgattaaaattttaatcttttgtatttcttacaaaataggattactttttgtccgcgtttat 27743447  T
Q  274 ttttggtctatgtagttgagaacattgtcggatgaaaataaaattgtaatgttggataaaatttaaaacattgcttaaaaatatgttgtgttttagcttt 373  Q
     ||| |||||  |||||| ||||||||| || ||||||||||||||||||||||||| |||||| |||||||| || |||||||| | ||||||||||||    
T  27743446 atttagtctacctagttgggaacattgttggctgaaaataaaattgtaatgttggatgaaattttaaacattg-ttgaaaatatgctttgttttagcttt 27743348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 36 - 346
Target Start/End: Original strand, 1564659 - 1564974
Alignment:
Q  36 caaaccaaaccaatccgcaatataagaaaagcacttattaaatatctatcatctaaatcaatactcataaaaattcaatgaaaactttaataaaatgaca 135  Q
    ||||||||||||| | |||||||||||||| || | ||||||||| ||||||||| | ||||||||||| |||||||| |||||||||||||||||||||    
T  1564659 caaaccaaaccaaactgcaatataagaaaaacaataattaaatatatatcatctagaccaatactcatataaattcaa-gaaaactttaataaaatgaca 1564757  T
Q  136 annnnnnnncttctgttgttaagtttcttttttgct------agcaaaaatgtatttatgtgctacttgaactcttcgataatgattaaaattttagtct 229  Q
             ||| |   ||| | |||||| |||| |      | |||||||||||||||||||||||| || |||   | |||||||||||||||| |||    
T  1564758 tttttttctcttgttaagtttaatttcttctttgttttttatatcaaaaatgtatttatgtgctacttaaaatctcaaagaatgattaaaattttactct 1564857  T
Q  230 tttgtatttcttatcaaataggattactttttgtccatgttttattttggtctatgtagttgagaacattgtcggatgaaaataaaattgtaatgttgga 329  Q
    |||||||||||||  ||||||||||| ||||||||||  ||||| ||||||||   |||||| ||||||||| | ||| |||||||||||||||||| ||    
T  1564858 tttgtatttcttacaaaataggattattttttgtccacattttaatttggtctgcatagttgggaacattgttgaatggaaataaaattgtaatgttaga 1564957  T
Q  330 taaaatttaaaacattg 346  Q
    | |||||||||||||||    
T  1564958 tgaaatttaaaacattg 1564974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 36 - 367
Target Start/End: Original strand, 23449582 - 23449914
Alignment:
Q  36 caaaccaaaccaatccgcaatataagaaaagcacttattaaatatctatcatctaaatcaatactcataaaaattcaatgaaaactttaataaaatgaca 135  Q
    ||||||||| |||  ||||||||||||||| || | ||||||||  ||||||||| | ||||||||||  | ||||||||||| |||||||||||||| |    
T  23449582 caaaccaaatcaaatcgcaatataagaaaaacattaattaaatacatatcatctagaccaatactcattgagattcaatgaaa-ctttaataaaatgaaa 23449680  T
Q  136 annnnnnnncttctgttgttaagtttcttttttg------ctagcaaaaatgtatttatgtgctacttgaactcttcgataatgattaaaattttagtct 229  Q
              || |  ||||||||||||| ||||      ||| |||||||||||||||||||||||||||||||| || ||| |||||||||||||| |    
T  23449681 tattatt---ttgttatgttaagtttcttctttgttttatctatcaaaaatgtatttatgtgctacttgaactcttagaaaattattaaaattttagttt 23449777  T
Q  230 tttgtatttcttatcaaataggattactttttgtccatgttttattttggtctatgtagttgagaacattgtcggatgaaaataaaattgtaatgttgga 329  Q
    |||| |||| |||  ||||||||||| |||||||||| |||||| |||| |||| ||||||| ||||||||   |||  |||||||||| ||||||| ||    
T  23449778 tttgaattttttacaaaataggattattttttgtccacgttttaatttgttctacgtagttgggaacattggtagatagaaataaaattataatgtttga 23449877  T
Q  330 taaaatttaaaacattgcttaaaaatatgttgtgtttt 367  Q
    | ||||||||||||||| ||||||||||||| ||||||    
T  23449878 tgaaatttaaaacattg-ttaaaaatatgttctgtttt 23449914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 36 - 353
Target Start/End: Complemental strand, 20986885 - 20986565
Alignment:
Q  36 caaaccaaaccaatccgcaatataagaaaagcacttattaaatatctatcatctaaatcaatactcataaaaattcaatgaaaactttaataaaatgaca 135  Q
    ||||||||||||| |||||||||||||||| |||| ||||||||| |||||  |  | ||||||||||| ||| |||||  |||||||||||||||||||    
T  20986885 caaaccaaaccaaaccgcaatataagaaaaacactaattaaatatatatcacttggaccaatactcatataaactcaatagaaactttaataaaatgaca 20986786  T
Q  136 annnnnnnncttctgttgttaagtttctt------ttttgctagcaaaaatgtatttatgtgctacttgaactcttcgataatgattaaaattttagtct 229  Q
              |||| ||||||||||||||      |||| ||  ||||||| |||||||||  ||||||||||||| || ||| |  ||  |||||||||    
T  20986785 tatttt----ttctcttgttaagtttcttctttcctttttctttcaaaaatttatttatgtattacttgaactcttagagaataacaaattttttagtct 20986690  T
Q  230 tttgtatttcttatcaaatag-gattactttttgtccatgttttattttggtctatgtagttgagaacattgtcggatgaaaataaaattgtaatgttgg 328  Q
    |||||||||||||  ||| |  |||||||||||||||  |||| | ||||||||| ||||||| |||||| || ||||| |||||||||| |||||||||    
T  20986689 tttgtatttcttacaaaaaaatgattactttttgtccgcgtttaaatttggtctacgtagttgggaacatcgttggatggaaataaaattataatgttgg 20986590  T
Q  329 ataaaatttaaaacattgcttaaaa 353  Q
    || ||||||||||||||||| ||||    
T  20986589 atgaaatttaaaacattgctgaaaa 20986565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 38 - 371
Target Start/End: Complemental strand, 29233233 - 29232898
Alignment:
Q  38 aaccaaaccaatccgcaatataagaaaagcacttattaaatatctatcatctaaatcaatactcataaaaattcaatgaaaactttaataaaatgacaan 137  Q
    |||||||| || || ||||||||||||| |||| ||||||||| ||| |  |  ||||||||||||| ||| ||||||||||||||||||||||||||      
T  29233233 aaccaaacaaaaccccaatataagaaaaacactaattaaatatatattacatggatcaatactcatagaaactcaatgaaaactttaataaaatgacata 29233134  T
Q  138 nnnnnnncttctgttgttaagtttcttttttg------ctagcaaaaatgtatttatgtgctacttgaactcttcgataatgattaaaat--tttagtct 229  Q
            |||  |||||||||||||| ||||      ||  |  ||||||||||||||  | ||| ||||||| || |||||| ||||   | ||||||    
T  29233133 tttt----ttcctttgttaagtttcttctttgatttttctttcctaaatgtatttatgtagtgcttaaactcttagagaatgataaaaaaaatatagtct 29233038  T
Q  230 tttgtatttcttatcaaataggattactttttgtccatgttttattttggtctatgtagttgagaacattgtcggatgaaaataaaattgtaatgttgga 329  Q
    ||| |||||||||  ||||| |||||||||||||||   ||| | ||||||||| |||||||  |||||||| |||||||||||||||||||||||||||    
T  29233037 tttatatttcttagaaaataagattactttttgtccgc-tttaaatttggtctacgtagttggaaacattgttggatgaaaataaaattgtaatgttgga 29232939  T
Q  330 taaaatttaaaacattgcttaaaaatatgttgtgttttagct 371  Q
    | ||||||||||||||| || |||||||||||| ||||||||    
T  29232938 tgaaatttaaaacattg-ttgaaaatatgttgttttttagct 29232898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 216 - 368
Target Start/End: Complemental strand, 15724197 - 15724044
Alignment:
Q  216 taaaattttagtcttttgtatttcttatcaaataggattactttttgtccatgtttt-attttggtctatgtagttgagaacattgtcggatgaaaataa 314  Q
    |||||| ||||||||||| ||||||||  |||||||||||| ||||||||||||||| |  ||||||||||| ||||  ||||||||   ||||||||||    
T  15724197 taaaatcttagtcttttgcatttcttaaaaaataggattacattttgtccatgtttttaacttggtctatgttgttggaaacattgtaaaatgaaaataa 15724098  T
Q  315 aattgtaatgttggataaaatttaaaacattgcttaaaaatatgttgtgtttta 368  Q
    ||||||||| || ||| ||||||||||||||||| |||||||||||||||||||    
T  15724097 aattgtaatatttgatgaaatttaaaacattgctgaaaaatatgttgtgtttta 15724044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 190 - 330
Target Start/End: Original strand, 48653602 - 48653743
Alignment:
Q  190 tgctacttgaactcttcgataatgattaaaattttagtcttttgtatttcttatcaaataggattac-tttttgtccatg-ttttattttggtctatgta 287  Q
    ||||||||||| ||||  |||||||| ||||| |||||||||||||||||| |  ||||| |||||| |||||||||| | ||||| |||||||||||||    
T  48653602 tgctacttgaattcttacataatgataaaaatcttagtcttttgtatttctaacaaaataagattacttttttgtccacgtttttaatttggtctatgta 48653701  T
Q  288 gttgagaacattgtcggatgaaaataaaattgtaatgttggat 330  Q
    ||||| |||||||| ||||||||||||||||||||||||||||    
T  48653702 gttga-aacattgttggatgaaaataaaattgtaatgttggat 48653743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 174 - 368
Target Start/End: Complemental strand, 53934993 - 53934801
Alignment:
Q  174 caaaaatgtatttatgtgctacttgaactcttcgataatgattaaaattttagtcttttgtatttcttatcaaataggattactttttgtccatgtttta 273  Q
    ||||||||||||||||| ||||||||||| || ||| ||||| ||||| ||| |||||||  | |||||| ||||| ||||||||||| ||||  ||||     
T  53934993 caaaaatgtatttatgtactacttgaacttttagatgatgat-aaaatcttaatcttttgcctatcttataaaatatgattactttttatccacattttt 53934895  T
Q  274 ttttggtctatgtagttgagaacattgtcggatgaaaataaaattgtaatgttggataaaatttaaaacattgcttaaaaatatgttgtgtttta 368  Q
     ||||||||||||||||||||| ||||| |||||| ||| |||||||   ||| ||| |||||||||||||||  | |||||||||||| |||||    
T  53934894 atttggtctatgtagttgagaatattgttggatgataatgaaattgttccgttagatgaaatttaaaacattg-gtcaaaatatgttgtatttta 53934801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 36 - 266
Target Start/End: Complemental strand, 41325881 - 41325649
Alignment:
Q  36 caaaccaaaccaatccgcaatataagaaaagcacttattaaatatctatcatctaaatcaatactcataaaaattcaatgaaaactttaataaaatgaca 135  Q
    ||||||||||||| |||||||||||||||| |||| |||| |||| |||||  |  | ||||||||  | ||| |||||| |||||||||||||||||||    
T  41325881 caaaccaaaccaaaccgcaatataagaaaaacactaattagatatatatcactttgaccaatactcgaataaactcaatggaaactttaataaaatgaca 41325782  T
Q  136 annnnnnnncttctgttgttaagtttcttttttg------ctagcaaaaatgtatttatgtgctacttgaactcttcgataatgattaaaattttagtct 229  Q
              |||| |||||||||||||| ||||      ||  ||||||||||||||||| |||||||||||||| || |||||| ||||||  |||||    
T  41325781 tatttt----ttcttttgttaagtttcttctttgttttttctttcaaaaatgtatttatgtactacttgaactcttagagaatgataaaaattcgagtct 41325686  T
Q  230 tttgtatttcttatcaaataggattactttttgtcca 266  Q
    ||||||||| |||| ||||| ||||||||||||||||    
T  41325685 tttgtattttttataaaataagattactttttgtcca 41325649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 245 - 373
Target Start/End: Complemental strand, 45464469 - 45464342
Alignment:
Q  245 aaataggattactttttgtccatgttttattttggtctatgtagttgagaacattgtcggatgaaaataaaattgtaatgttggataaaatttaaaacat 344  Q
    |||||||||||||||||||| |||||||| ||||||||| || |||| ||||||| |   ||| ||||||||||| |||||| ||| |||||||||||||    
T  45464469 aaataggattactttttgtctatgttttaatttggtctacgtggttgggaacattttgttatggaaataaaattgcaatgtttgatgaaatttaaaacat 45464370  T
Q  345 tgcttaaaaatatgttgtgttttagcttt 373  Q
    ||| |||||||||||| ||||||||||||    
T  45464369 tgc-taaaaatatgttatgttttagcttt 45464342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 36 - 135
Target Start/End: Complemental strand, 45464641 - 45464542
Alignment:
Q  36 caaaccaaaccaatccgcaatataagaaaagcacttattaaatatctatcatctaaatcaatactcataaaaattcaatgaaaactttaataaaatgaca 135  Q
    ||||||||| ||| ||||||||||||||||  ||| ||||||||| ||| ||||||| ||||||||||| ||||||||||||||||||||||||||||||    
T  45464641 caaaccaaatcaaaccgcaatataagaaaaatactgattaaatatatataatctaaaccaatactcatagaaattcaatgaaaactttaataaaatgaca 45464542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 225 - 373
Target Start/End: Original strand, 23120033 - 23120182
Alignment:
Q  225 agtcttttgtatttcttatcaaataggattactttttgtccatgtttt-attttggtctatgtagttgagaacattgtcggatgaaaataaaattgtaat 323  Q
    ||||||||| ||||| ||  |||||| ||||| ||||||||||||||| |  ||||||||||| ||||  ||||||||   |||||||||||||||||||    
T  23120033 agtcttttgcatttcatagaaaatagaattacgttttgtccatgtttttaacttggtctatgttgttggaaacattgtaaaatgaaaataaaattgtaat 23120132  T
Q  324 gttggataaaatttaaaacattgcttaaaaatatgttgtgttttagcttt 373  Q
     || ||| || |||||||||||||| ||||||||||||||||||| ||||    
T  23120133 atttgatgaagtttaaaacattgctgaaaaatatgttgtgttttaacttt 23120182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 175 - 345
Target Start/End: Complemental strand, 35014619 - 35014448
Alignment:
Q  175 aaaaatgtatttatgtgctacttgaactcttcgataatgattaaaattttagtctttt-gtatttcttatcaaataggattactttttgtccatgtttt- 272  Q
    ||||||||||||||||||||||| ||||  | || |||||| ||||||||||| |||| | ||||||||  ||||| ||||| |||||||||| |||||     
T  35014619 aaaaatgtatttatgtgctacttaaacttctagagaatgat-aaaattttagtttttttgcatttcttacaaaataagattattttttgtccacgttttt 35014521  T
Q  273 attttggtctatgtagttgagaacattgtcggatgaaaataaaattgtaatgttggataaaatttaaaacatt 345  Q
    |  ||| | |||||||||| ||||||| | |||| ||||||||||||||||||| ||| ||||||||||||||    
T  35014520 aacttgatttatgtagttgcgaacattattggataaaaataaaattgtaatgttcgatgaaatttaaaacatt 35014448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 227 - 373
Target Start/End: Complemental strand, 45983678 - 45983531
Alignment:
Q  227 tcttttgtatttcttatcaaataggattactttttgtccatgtttt-attttggtctatgtagttgagaacattgtcggatgaaaataaaattgtaatgt 325  Q
    ||||||| ||||||||  |||||||||||  ||||||||||||||| |  ||||||||||| ||||  ||||||||   |||||||||||||| |||| |    
T  45983678 tcttttgcatttcttagaaaataggattatgttttgtccatgtttttaacttggtctatgttgttggaaacattgtaaaatgaaaataaaattttaatat 45983579  T
Q  326 tggataaaatttaaaacattgcttaaaaatatgttgtgttttagcttt 373  Q
    | ||| |||||||||| |||||| ||||||||||||||||||| ||||    
T  45983578 ttgatgaaatttaaaatattgctgaaaaatatgttgtgttttaacttt 45983531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 92 - 368
Target Start/End: Complemental strand, 6102316 - 6102040
Alignment:
Q  92 atcaatactcataaaaattcaatgaaaactttaataaaatgacaannnnnnnncttctgttgttaagtttcttttttgct------agcaaaaatgtatt 185  Q
    |||||||||||||||||||||||||||||||| |||||||||||          ||||  ||||||||||||| || |||      |  ||||| |||||    
T  6102316 atcaatactcataaaaattcaatgaaaacttttataaaatgacattttt-----ttctcgtgttaagtttcttcttcgctttttatattaaaaaagtatt 6102222  T
Q  186 tatgtgctacttgaactcttcgataatgattaaaattttagtcttttgtatttcttatcaaataggattactttttgtccatgttttat-tttggtctat 284  Q
    ||| ||||||| ||||| ||  | |||| ||||||| ||||| ||||| ||||| ||  |||||||||||||| |||||||  |||| | ||| ||||||    
T  6102221 tatttgctactggaacttttaaagaatg-ttaaaatcttagttttttgcatttcatacaaaataggattacttattgtccacattttttatttagtctat 6102123  T
Q  285 gtagttgagaacattgtcggatgaaaataaaattgtaatgttggataaaatttaaaacattgcttaaaaatatgttgtgtttta 368  Q
    || |||| ||| ||||| ||||   ||| ||||||||||||||||| ||||||||||||| | || ||||||||||||||||||    
T  6102122 gtggttgggaatattgttggatattaatgaaattgtaatgttggatgaaatttaaaacatcg-ttgaaaatatgttgtgtttta 6102040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 182 - 373
Target Start/End: Original strand, 19753246 - 19753437
Alignment:
Q  182 tatttatgtgctacttgaactcttcgataatgattaaaattttagtcttttgtatttcttatcaaataggattactttttgtccatgttttat-tttggt 280  Q
    ||||| |||| || ||||||||||  | |||||| |||| |||||||||||||  || |||  ||||   ||||||||||||||| |||| |  ||||||    
T  19753246 tatttttgtggtatttgaactcttaaagaatgataaaaaatttagtcttttgtgatttttacaaaatttaattactttttgtccacgtttaaactttggt 19753345  T
Q  281 ctatgtagttgagaacattgtcggatgaaaataaaattgtaatgttggataaaatttaaaacattgcttaaaaatatgttgtgttttagcttt 373  Q
     || ||||||| | |||||||  |||||||||||||| |||||||||||| |||||||||||||||| | ||||||| |||||||||| ||||    
T  19753346 gtacgtagttgggtacattgtttgatgaaaataaaatcgtaatgttggatgaaatttaaaacattgc-tgaaaatatattgtgttttatcttt 19753437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 182 - 373
Target Start/End: Complemental strand, 19786560 - 19786369
Alignment:
Q  182 tatttatgtgctacttgaactcttcgataatgattaaaattttagtcttttgtatttcttatcaaataggattactttttgtccatgttttat-tttggt 280  Q
    ||||| |||| || ||||||||||  | |||||| |||| |||||||||||||  || |||  ||||   ||||||||||||||| |||| |  ||||||    
T  19786560 tatttttgtggtatttgaactcttaaagaatgataaaaaatttagtcttttgtgatttttacaaaatttaattactttttgtccacgtttaaactttggt 19786461  T
Q  281 ctatgtagttgagaacattgtcggatgaaaataaaattgtaatgttggataaaatttaaaacattgcttaaaaatatgttgtgttttagcttt 373  Q
     || ||||||| | |||||||  |||||||||||||| |||||||||||| |||||||||||||||| | ||||||| |||||||||| ||||    
T  19786460 gtacgtagttgggtacattgtttgatgaaaataaaatcgtaatgttggatgaaatttaaaacattgc-tgaaaatatattgtgttttatcttt 19786369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 36 - 266
Target Start/End: Complemental strand, 28148250 - 28148019
Alignment:
Q  36 caaaccaaaccaatccgcaatataagaaaagcacttattaaatatctatcatctaaatcaatactcataaaaattcaatgaaaactttaataaaatgaca 135  Q
    ||||||||| ||| | |||||||||||||| |||| ||||||||  || |||||| | ||||||||||| ||||||||||  |||||||||||  ||| |    
T  28148250 caaaccaaatcaaactgcaatataagaaaaacactaattaaatacataccatctagaccaatactcatataaattcaatgtgaactttaataa--tgaaa 28148153  T
Q  136 annnnnnnncttctgttgttaagtttcttttttgct------agcaaaaatgtatttatgtgctacttgaactcttcgataatgattaaaattttagtct 229  Q
              ||||  ||||||||||||| ||||||      | ||||||||||||||||||||||||| |||||  || ||| ||||||||||||||||    
T  28148152 tattatt---ttctcctgttaagtttcttctttgctttttctatcaaaaatgtatttatgtgctacttgcactctcagagaattattaaaattttagtct 28148056  T
Q  230 tttgtatttcttatcaaataggattactttttgtcca 266  Q
    |||| ||||||||  ||||| ||||||||||| ||||    
T  28148055 tttgaatttcttacaaaatatgattactttttatcca 28148019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 217 - 329
Target Start/End: Complemental strand, 2940212 - 2940100
Alignment:
Q  217 aaaattttagtcttttgtatttcttatcaaataggattactttttgtccatgttttattttggtctatgtagttgagaacattgtcggatgaaaataaaa 316  Q
    |||| |||||||||||||||||||||  || | ||||||||| |||||||| ||||| ||  ||||| ||||||| ||||||||| ||||||||||||||    
T  2940212 aaaaatttagtcttttgtatttcttaaaaatttggattacttcttgtccatattttaattccgtctacgtagttgggaacattgttggatgaaaataaaa 2940113  T
Q  317 ttgtaatgttgga 329  Q
    |  ||||||||||    
T  2940112 tcttaatgttgga 2940100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 174 - 346
Target Start/End: Complemental strand, 45226718 - 45226549
Alignment:
Q  174 caaaaatgtatttatgtgctacttgaactcttcgataatgattaaaattttagtcttttgtatttcttatcaaataggattactttttgtccatgtttt- 272  Q
    |||||||||||||| |||||| ||||||  || || |||||| ||||| |||  |||||| ||||||||  |||||  |||||||||||| || |||||     
T  45226718 caaaaatgtatttacgtgctatttgaacctttagagaatgat-aaaatcttatccttttgcatttcttacaaaataaaattactttttgttcacgttttt 45226620  T
Q  273 attttggtctatgtagttgagaacattgtcggatgaaaataaaattgtaatgttggataaaatttaaaacattg 346  Q
    | ||||   |||||| |||| |||||||| | |||||||| ||||||||||||| ||| |||||||||||||||    
T  45226619 aatttg---tatgtaattgaaaacattgttgtatgaaaatgaaattgtaatgtttgatgaaatttaaaacattg 45226549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 174 - 264
Target Start/End: Complemental strand, 4689026 - 4688937
Alignment:
Q  174 caaaaatgtatttatgtgctacttgaactcttcgataatgattaaaattttagtcttttgtatttcttatcaaataggattactttttgtc 264  Q
    |||||||||||||| |||||||||||||| ||  |||||||| ||||||||| ||||||| |||||||||  |||| ||||||||||||||    
T  4689026 caaaaatgtatttaggtgctacttgaactttttaataatgat-aaaattttaatcttttgcatttcttatagaatatgattactttttgtc 4688937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 175 - 336
Target Start/End: Original strand, 5122119 - 5122280
Alignment:
Q  175 aaaaatgtatttatgtgctacttgaactcttcgataatgattaaaattttagtcttttgtatttcttatcaaataggattactttttgtccatg-tttta 273  Q
    ||||| |||||||||||||||||||||| ||  ||||||| |||||  ||||||||||| || | |||  |||||| ||||||||||||||| | |||||    
T  5122119 aaaaacgtatttatgtgctacttgaacttttatataatga-taaaaccttagtcttttgcatcttttacaaaatagaattactttttgtccacgttttta 5122217  T
Q  274 ttttggtctatgtagttgagaacattgtcggatgaaaataaaattgtaatgttggataaaatt 336  Q
     |||||| ||| | ||||  ||||| || | |||||||| ||||||||||||| ||| |||||    
T  5122218 atttggtttatattgttggaaacatcgtagaatgaaaatgaaattgtaatgtttgatgaaatt 5122280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 177 - 342
Target Start/End: Original strand, 3666809 - 3666974
Alignment:
Q  177 aaatgtatttatgtgctacttgaactcttcgataatgattaaaattttagtcttttgtatttcttatcaaataggattactttttgtccatgtttt-att 275  Q
    ||||||||||||||  |||||||||| ||  | |||||| ||||| ||||| ||||| | |||| ||  |||| ||||||||||||||||  |||| | |    
T  3666809 aaatgtatttatgtattacttgaacttttaaagaatgat-aaaatcttagtgttttgcacttctcatagaatatgattactttttgtccacctttttaat 3666907  T
Q  276 ttggtctatgtagttgagaacattgtcggatgaaaataaaattgtaatgttggataaaatttaaaac 342  Q
    ||||||||||| ||| ||||| ||||  ||||||||| ||||| ||||||||| | ||||| |||||    
T  3666908 ttggtctatgttgttaagaactttgtttgatgaaaatgaaattataatgttgggtgaaattcaaaac 3666974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 221 - 353
Target Start/End: Original strand, 45150739 - 45150871
Alignment:
Q  221 ttttagtcttttgtatttcttatcaaataggattactttttgtccatgttttattttggtctatgtagttgagaacattgtcggatgaaaataaaattgt 320  Q
    ||||||||||||||| || |||  ||||   ||||||||||||||| |||| | | | || || ||| ||| | || ||||  |||||||||||||| ||    
T  45150739 ttttagtcttttgtaatttttacaaaatttaattactttttgtccacgtttaaatctagtgtacgtaattgggtacgttgttcgatgaaaataaaatcgt 45150838  T
Q  321 aatgttggataaaatttaaaacattgcttaaaa 353  Q
    |||||||||| ||||||||||||||||| ||||    
T  45150839 aatgttggatgaaatttaaaacattgctgaaaa 45150871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 235 - 373
Target Start/End: Complemental strand, 8312179 - 8312040
Alignment:
Q  235 atttcttatcaaataggattactttttgtcc--atgttttattttggtctatgtagttgagaacattgtcggatgaaaataaaattgtaatgttggataa 332  Q
    |||||||| | |||| |||||| |||||||   || ||| |||| ||||||||| ||||  |||||||  || ||||||| |||||| ||| | |||| |    
T  8312179 atttcttaccgaatatgattaccttttgtctttatctttaatttgggtctatgttgttgtaaacattgctggttgaaaatgaaattgaaatatgggatga 8312080  T
Q  333 aatttaaaacattgcttaaaaatatgttgtgttttagcttt 373  Q
    ||||||||||||||| | ||||| |||||||||||||||||    
T  8312079 aatttaaaacattgc-tgaaaatttgttgtgttttagcttt 8312040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 174 - 243
Target Start/End: Complemental strand, 42199136 - 42199068
Alignment:
Q  174 caaaaatgtatttatgtgctacttgaactcttcgataatgattaaaattttagtcttttgtatttcttat 243  Q
    |||| |||||||||||||||||||||||| || || ||| | |||||||||||||||||| |||||||||    
T  42199136 caaacatgtatttatgtgctacttgaacttttagagaat-aataaaattttagtcttttgcatttcttat 42199068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 12016706 - 12016672
Alignment:
Q  1 ttttgtaaggatgagttaggcccccaatttcaaca 35  Q
    |||||||||||||||||||||||||||||||||||    
T  12016706 ttttgtaaggatgagttaggcccccaatttcaaca 12016672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 12016914 - 12016880
Alignment:
Q  1 ttttgtaaggatgagttaggcccccaatttcaaca 35  Q
    |||||||||||||||||||||||||||||||||||    
T  12016914 ttttgtaaggatgagttaggcccccaatttcaaca 12016880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 304 - 346
Target Start/End: Complemental strand, 17845119 - 17845077
Alignment:
Q  304 gatgaaaataaaattgtaatgttggataaaatttaaaacattg 346  Q
    ||||||||||||||||||||||||||| |||||||||| ||||    
T  17845119 gatgaaaataaaattgtaatgttggatgaaatttaaaatattg 17845077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 36 - 90
Target Start/End: Original strand, 23625507 - 23625561
Alignment:
Q  36 caaaccaaaccaatccgcaatataagaaaagcacttattaaatatctatcatcta 90  Q
    ||||||||||||| |||||||||||||||| |||| ||||||||| |||| ||||    
T  23625507 caaaccaaaccaaaccgcaatataagaaaaacactaattaaatatatatcgtcta 23625561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 28245869 - 28245903
Alignment:
Q  1 ttttgtaaggatgagttaggcccccaatttcaaca 35  Q
    |||||||||||||||||||||||||||||||||||    
T  28245869 ttttgtaaggatgagttaggcccccaatttcaaca 28245903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 43943754 - 43943788
Alignment:
Q  1 ttttgtaaggatgagttaggcccccaatttcaaca 35  Q
    |||||||||||||||||||||||||||||||||||    
T  43943754 ttttgtaaggatgagttaggcccccaatttcaaca 43943788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 174 - 232
Target Start/End: Complemental strand, 49641178 - 49641121
Alignment:
Q  174 caaaaatgtatttatgtgctacttgaactcttcgataatgattaaaattttagtctttt 232  Q
    |||||||||||||||||| |||||||||| || |||||||| |||||| ||||||||||    
T  49641178 caaaaatgtatttatgtgttacttgaacttttagataatga-taaaatcttagtctttt 49641121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 305 - 346
Target Start/End: Original strand, 10778339 - 10778380
Alignment:
Q  305 atgaaaataaaattgtaatgttggataaaatttaaaacattg 346  Q
    |||||||||||||||||||||||||| |||||| ||||||||    
T  10778339 atgaaaataaaattgtaatgttggatcaaatttgaaacattg 10778380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 175 - 291
Target Start/End: Original strand, 25686199 - 25686314
Alignment:
Q  175 aaaaatgtatttatgtgctacttgaactcttcgataatgattaaaattttagtcttttgtatttcttatcaaataggattactttttgtccatgttttat 274  Q
    ||||||||||||| |||||||||||||| ||  | |||||| ||||||||||||||||  |||| |||| |||||| |||| |||||  ||| ||||| |    
T  25686199 aaaaatgtattta-gtgctacttgaacttttaaagaatgat-aaaattttagtcttttacatttgttataaaatagaattaattttttgccacgtttttt 25686296  T
Q  275 -tttggtctatgtagttg 291  Q
     |||||||||||| ||||    
T  25686297 atttggtctatgttgttg 25686314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 28395258 - 28395295
Alignment:
Q  1 ttttgtaaggatgagttaggcccccaatttcaacacaa 38  Q
    |||||||||||||||||||||||| |||||||||||||    
T  28395258 ttttgtaaggatgagttaggccccaaatttcaacacaa 28395295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 217 - 292
Target Start/End: Original strand, 7784321 - 7784397
Alignment:
Q  217 aaaattttagtcttttgtatttcttatcaaataggattactttttgtccatg-ttttattttggtctatgtagttga 292  Q
    ||||| ||||||| ||  ||||||||  ||||| |||||||||||||||||| ||||| |||||||||||| |||||    
T  7784321 aaaatcttagtctattacatttcttacaaaatatgattactttttgtccatgtttttaatttggtctatgttgttga 7784397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 23018551 - 23018586
Alignment:
Q  1 ttttgtaaggatgagttaggcccccaatttcaacac 36  Q
    |||||||||||||||||||||||| |||||||||||    
T  23018551 ttttgtaaggatgagttaggccccaaatttcaacac 23018586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 27048160 - 27048121
Alignment:
Q  1 ttttgtaaggatgagttaggcccccaatttcaacacaaac 40  Q
    |||||||||||||||||||||||| |||||||||| ||||    
T  27048160 ttttgtaaggatgagttaggccccaaatttcaacagaaac 27048121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 298 - 341
Target Start/End: Complemental strand, 40494656 - 40494613
Alignment:
Q  298 ttgtcggatgaaaataaaattgtaatgttggataaaatttaaaa 341  Q
    |||| |||||||||||||||||| ||||||||| ||||||||||    
T  40494656 ttgttggatgaaaataaaattgtgatgttggatgaaatttaaaa 40494613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 50858093 - 50858128
Alignment:
Q  1 ttttgtaaggatgagttaggcccccaatttcaacac 36  Q
    |||||||||||||||||||||||| |||||||||||    
T  50858093 ttttgtaaggatgagttaggccccaaatttcaacac 50858128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 303 - 346
Target Start/End: Original strand, 54273883 - 54273926
Alignment:
Q  303 ggatgaaaataaaattgtaatgttggataaaatttaaaacattg 346  Q
    |||||||| ||||||||||||||||||| |||||| ||||||||    
T  54273883 ggatgaaagtaaaattgtaatgttggattaaatttgaaacattg 54273926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 990628 - 990662
Alignment:
Q  1 ttttgtaaggatgagttaggcccccaatttcaaca 35  Q
    |||||||||||||||||||||||| ||||||||||    
T  990628 ttttgtaaggatgagttaggccccaaatttcaaca 990662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 280 - 346
Target Start/End: Complemental strand, 12916627 - 12916561
Alignment:
Q  280 tctatgtagttgagaacattgtcggatgaaaataaaattgtaatgttggataaaatttaaaacattg 346  Q
    ||||||| |||| || ||||||  ||||||||| ||||||| ||||| ||| |||||||||||||||    
T  12916627 tctatgttgttgggagcattgttagatgaaaatgaaattgtgatgtttgatgaaatttaaaacattg 12916561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 287 - 373
Target Start/End: Complemental strand, 28148015 - 28147931
Alignment:
Q  287 agttgagaacattgtcggatgaaaataaaattgtaatgttggataaaatttaaaacattgcttaaaaatatgttgtgttttagcttt 373  Q
    |||| ||||||||||  |||  || |||||||||||||||| || ||||||||||||||| || || || |||||||||||||||||    
T  28148015 agtttagaacattgttagatagaattaaaattgtaatgttgtatgaaatttaaaacattg-ttgaagat-tgttgtgttttagcttt 28147931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 29113530 - 29113564
Alignment:
Q  1 ttttgtaaggatgagttaggcccccaatttcaaca 35  Q
    |||||||||||||||||||||||| ||||||||||    
T  29113530 ttttgtaaggatgagttaggccccaaatttcaaca 29113564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 29669386 - 29669352
Alignment:
Q  1 ttttgtaaggatgagttaggcccccaatttcaaca 35  Q
    |||||||||||||||||||||||| ||||||||||    
T  29669386 ttttgtaaggatgagttaggccccaaatttcaaca 29669352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 38 - 135
Target Start/End: Original strand, 32222912 - 32223010
Alignment:
Q  38 aaccaaaccaatccgcaatataagaaaagcacttattaaa-tatctatcatctaaatcaatactcataaaaattcaatgaaaactttaataaaatgaca 135  Q
    ||||||||||| |||||| |||| |||| |||| |||||| ||| | ||| ||| | ||||| ||||| ||| |||||| ||||||| |||||||||||    
T  32222912 aaccaaaccaaaccgcaacataataaaaacactaattaaaatatatgtcacctataccaatattcatataaactcaatgtaaacttttataaaatgaca 32223010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 36558489 - 36558455
Alignment:
Q  1 ttttgtaaggatgagttaggcccccaatttcaaca 35  Q
    |||||||||||||||||||||||| ||||||||||    
T  36558489 ttttgtaaggatgagttaggccccaaatttcaaca 36558455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 45427275 - 45427241
Alignment:
Q  1 ttttgtaaggatgagttaggcccccaatttcaaca 35  Q
    |||||||||||||||||||||||| ||||||||||    
T  45427275 ttttgtaaggatgagttaggccccaaatttcaaca 45427241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 174 - 272
Target Start/End: Complemental strand, 46471772 - 46471675
Alignment:
Q  174 caaaaatgtatttatgtgctacttgaactcttcgataatgattaaaattttagtcttttgtatttcttatcaaataggattactttttgtccatgtttt 272  Q
    |||||||||||||||||| ||||| |||| || || ||||| |||||| ||| |||||| | |||||||   ||||| |||||||| |||||| |||||    
T  46471772 caaaaatgtatttatgtgatacttcaacttttagagaatga-taaaatcttaatcttttatgtttcttacataatagaattactttgtgtccacgtttt 46471675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 50858406 - 50858440
Alignment:
Q  1 ttttgtaaggatgagttaggcccccaatttcaaca 35  Q
    |||||||||||||||||||||||| ||||||||||    
T  50858406 ttttgtaaggatgagttaggccccaaatttcaaca 50858440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 51470564 - 51470598
Alignment:
Q  1 ttttgtaaggatgagttaggcccccaatttcaaca 35  Q
    |||||||||||||||||||||||| ||||||||||    
T  51470564 ttttgtaaggatgagttaggccccaaatttcaaca 51470598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 51470725 - 51470759
Alignment:
Q  1 ttttgtaaggatgagttaggcccccaatttcaaca 35  Q
    |||||||||||||||||||||||| ||||||||||    
T  51470725 ttttgtaaggatgagttaggccccaaatttcaaca 51470759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 52214696 - 52214730
Alignment:
Q  1 ttttgtaaggatgagttaggcccccaatttcaaca 35  Q
    |||||||||||||||||||||||| ||||||||||    
T  52214696 ttttgtaaggatgagttaggccccaaatttcaaca 52214730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 53740263 - 53740297
Alignment:
Q  1 ttttgtaaggatgagttaggcccccaatttcaaca 35  Q
    |||||||||||||||||||||||| ||||||||||    
T  53740263 ttttgtaaggatgagttaggccccaaatttcaaca 53740297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 56511378 - 56511412
Alignment:
Q  1 ttttgtaaggatgagttaggcccccaatttcaaca 35  Q
    |||||||||||||||||||||||| ||||||||||    
T  56511378 ttttgtaaggatgagttaggccccaaatttcaaca 56511412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 56511585 - 56511619
Alignment:
Q  1 ttttgtaaggatgagttaggcccccaatttcaaca 35  Q
    |||||||||||||||||||||||| ||||||||||    
T  56511585 ttttgtaaggatgagttaggccccaaatttcaaca 56511619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 400406 - 400373
Alignment:
Q  1 ttttgtaaggatgagttaggcccccaatttcaac 34  Q
    |||||||||||||||||||||||| |||||||||    
T  400406 ttttgtaaggatgagttaggccccaaatttcaac 400373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 174 - 215
Target Start/End: Original strand, 18536397 - 18536438
Alignment:
Q  174 caaaaatgtatttatgtgctacttgaactcttcgataatgat 215  Q
    ||||||||||||||||||||||||||||| || || ||||||    
T  18536397 caaaaatgtatttatgtgctacttgaacttttagagaatgat 18536438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 86 - 135
Target Start/End: Complemental strand, 29701069 - 29701020
Alignment:
Q  86 atctaaatcaatactcataaaaattcaatgaaaactttaataaaatgaca 135  Q
    ||||||| ||||||||||| ||  |||||||||||||| |||||||||||    
T  29701069 atctaaaccaatactcatagaagctcaatgaaaacttttataaaatgaca 29701020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 117
Target Start/End: Complemental strand, 41260595 - 41260514
Alignment:
Q  36 caaaccaaaccaatccgcaatataagaaaagcacttattaaatatctatcatctaaatcaatactcataaaaattcaatgaa 117  Q
    ||||||||||||| | |||| ||||||||| |||| ||||||  | | ||||||||| ||||||||||| ||| || |||||    
T  41260595 caaaccaaaccaaactgcaacataagaaaaacactaattaaacttatgtcatctaaaccaatactcatagaaactccatgaa 41260514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 43972436 - 43972469
Alignment:
Q  1 ttttgtaaggatgagttaggcccccaatttcaac 34  Q
    |||||||||||||||||||||||| |||||||||    
T  43972436 ttttgtaaggatgagttaggccccaaatttcaac 43972469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 45426959 - 45426926
Alignment:
Q  1 ttttgtaaggatgagttaggcccccaatttcaac 34  Q
    |||||||||||||||||||||||| |||||||||    
T  45426959 ttttgtaaggatgagttaggccccaaatttcaac 45426926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 92
Target Start/End: Original strand, 48293026 - 48293083
Alignment:
Q  35 acaaaccaaaccaatccgcaatataagaaaagcacttattaaatatctatcatctaaa 92  Q
    |||||||||||||| |||||| ||||||||| |||| ||||||| | | |||||||||    
T  48293026 acaaaccaaaccaaaccgcaagataagaaaaacactaattaaatctatgtcatctaaa 48293083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 297 - 346
Target Start/End: Complemental strand, 51907306 - 51907257
Alignment:
Q  297 attgtcggatgaaaataaaattgtaatgttggataaaatttaaaacattg 346  Q
    ||||| || ||||||||||||||||| ||||||| |||| ||||||||||    
T  51907306 attgttgggtgaaaataaaattgtaaagttggatgaaatataaaacattg 51907257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 35
Target Start/End: Complemental strand, 1923217 - 1923185
Alignment:
Q  3 ttgtaaggatgagttaggcccccaatttcaaca 35  Q
    |||||||||||||||||||||| ||||||||||    
T  1923217 ttgtaaggatgagttaggccccaaatttcaaca 1923185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 298 - 346
Target Start/End: Original strand, 3349780 - 3349828
Alignment:
Q  298 ttgtcggatgaaaataaaattgtaatgttggataaaatttaaaacattg 346  Q
    |||| |||||||||| || |||||| ||||||| |||||||||||||||    
T  3349780 ttgttggatgaaaatgaatttgtaaagttggatcaaatttaaaacattg 3349828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 217 - 292
Target Start/End: Original strand, 7764209 - 7764285
Alignment:
Q  217 aaaattttagtcttttgtatttcttatcaaataggattactttttgtccatg-ttttattttggtctatgtagttga 292  Q
    ||||| ||||||||||  ||||||||| ||||| |||||||||||| ||| | ||||| ||||||||| || |||||    
T  7764209 aaaatcttagtcttttacatttcttataaaatatgattactttttgaccacgtttttaatttggtctaagttgttga 7764285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 306 - 346
Target Start/End: Original strand, 18881897 - 18881937
Alignment:
Q  306 tgaaaataaaattgtaatgttggataaaatttaaaacattg 346  Q
    ||||||||||||| ||||||||||| |||||||||| ||||    
T  18881897 tgaaaataaaattataatgttggatgaaatttaaaatattg 18881937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 174 - 202
Target Start/End: Original strand, 48293164 - 48293192
Alignment:
Q  174 caaaaatgtatttatgtgctacttgaact 202  Q
    |||||||||||||||||||||||||||||    
T  48293164 caaaaatgtatttatgtgctacttgaact 48293192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 174 - 238
Target Start/End: Original strand, 48602247 - 48602310
Alignment:
Q  174 caaaaatgtatttatgtgctacttgaactcttcgataatgattaaaattttagtcttttgtattt 238  Q
    ||||||| | ||||||||||||||||||| || |||||||| |||||| ||||| ||||| ||||    
T  48602247 caaaaatatgtttatgtgctacttgaacttttagataatga-taaaatcttagttttttgcattt 48602310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 145; Significance: 3e-76; HSPs: 62)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 36 - 373
Target Start/End: Complemental strand, 25495578 - 25495238
Alignment:
Q  36 caaaccaaaccaatccgcaatataagaaaagcacttattaaatatctatcatctaaatcaatactcataaaaattcaatgaaaactttaataaaatgaca 135  Q
    |||||||||| || ||||||||||||||||  ||| ||||||||| ||||||||| | ||||||||||| || ||||||| |||||||||||||||||||    
T  25495578 caaaccaaactaaaccgcaatataagaaaaaaactaattaaatatgtatcatctagaccaatactcatataagttcaatggaaactttaataaaatgaca 25495479  T
Q  136 annnnnnnncttctgttgttaagtttctt------ttttgctagcaaaaatgtatttatgtgctacttgaactcttcgataatgattaaaattttagtct 229  Q
              |||| ||||||||||||||      |||| ||| ||| ||| |||||||||||||||||||||||| || ||||||||||||||||||||    
T  25495478 tttttttt--ttctcttgttaagtttcttctaagctttttctatcaataatatatttatgtgctacttgaactcttagagaatgattaaaattttagtct 25495381  T
Q  230 tttgtatttcttatcaaataggattactttttgtccatgttttattttggtctatgtagttgagaacattgtcggatgaaaataaaattgtaatgttgga 329  Q
    |||||||||||||  ||||| |||||||||||||||| |||||| ||||||||| ||||||  ||||||||| |||||||||||||||| ||||||| ||    
T  25495380 tttgtatttcttacaaaataagattactttttgtccacgttttaatttggtctacgtagttcggaacattgttggatgaaaataaaattataatgtttga 25495281  T
Q  330 taaaatttaaaacattgcttaaaaatatgttgtgttttagcttt 373  Q
    | | ||||||||||||| || |||||||||||||||||| ||||    
T  25495280 tgatatttaaaacattg-ttgaaaatatgttgtgttttaccttt 25495238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 73 - 327
Target Start/End: Complemental strand, 10090678 - 10090423
Alignment:
Q  73 ttaaatatctatcatctaaatcaatactcataaaaattcaatgaaaactttaataaaatgacaannnnnnnncttctgttgttaagtttcttttttgct- 171  Q
    |||||||| ||||||||| | ||||||||| | |||||||| |||||||||||||||||||||          |||| ||||| |||||||| ||||||     
T  10090678 ttaaatatatatcatctagaccaatactcagagaaattcaaagaaaactttaataaaatgacatctttt----ttctcttgttgagtttcttctttgctt 10090583  T
Q  172 -----agcaaaaatgtatttatgtgctacttgaactcttcgataatgattaaaattttagtcttttgtatttcttatcaaataggattactttttgtcca 266  Q
         |  ||||||||||||||||||||||| ||||||| || ||||||| || ||||||||||||||||||||||  ||||||||||||||||||||||    
T  10090582 tttctataaaaaatgtatttatgtgctacttaaactcttagagaatgatttaa-ttttagtcttttgtatttcttacaaaataggattactttttgtcca 10090484  T
Q  267 tgttttattttggtctatgtagttgagaacattgtcggatgaaaataaaattgtaatgttg 327  Q
      ||||| ||||||||| ||||||| ||||||| | |||||||||||||||||||||||||    
T  10090483 aattttaatttggtctacgtagttgggaacattattggatgaaaataaaattgtaatgttg 10090423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 174 - 373
Target Start/End: Complemental strand, 36568061 - 36567863
Alignment:
Q  174 caaaaatgtatttatgtgctacttgaactcttcgataatgattaaaattttagtcttttgtatttcttatcaaataggattactttttgtccatgtttta 273  Q
    ||||||||||||||||| |||||||||||||| || |||||| |||  |||||||||||||||||||||  ||||| |||||||||| |||   |||| |    
T  36568061 caaaaatgtatttatgtactacttgaactcttagagaatgataaaatatttagtcttttgtatttcttacaaaatatgattacttttggtctgcgtttaa 36567962  T
Q  274 ttttggtctatgtagttgagaacattgtcggatgaaaataaaattgtaatgttggataaaatttaaaacattgcttaaaaatatgttgtgttttagcttt 373  Q
     ||||||||| ||||||| ||||||||| |||||||||||||||||||||  || || ||||||| || ||||| | |||||||||||||||||||||||    
T  36567961 atttggtctacgtagttgggaacattgttggatgaaaataaaattgtaataatgtatgaaatttagaaaattgc-tgaaaatatgttgtgttttagcttt 36567863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 36 - 373
Target Start/End: Complemental strand, 41455359 - 41455021
Alignment:
Q  36 caaaccaaaccaatccgcaatataagaaaagcacttattaaatatctatcatctaaatcaatactcataaaaattcaatgaaaactttaataaaatgaca 135  Q
    ||||||||| | | |||||||||||||||| |||| ||||||||| |||||  |  | ||||||||||| ||| |||||| |||||||||||||||||||    
T  41455359 caaaccaaatcgaaccgcaatataagaaaaacactaattaaatatatatcacttggaccaatactcatagaaactcaatggaaactttaataaaatgaca 41455260  T
Q  136 annnnnnnncttctgttgttaagtttctt------ttttgctagcaaaaatgtatttatgtgctacttgaactcttcgataatgattaaaattttagtct 229  Q
              |||| ||||||| ||| ||      |||| ||  |||||||||| ||||||  |||||||||||||  | | |||| |||| ||||||||    
T  41455259 tatttt----ttctcttgttaacttttttctgtactttttctttcaaaaatgtacttatgtattacttgaactcttataaagtgataaaaaatttagtct 41455164  T
Q  230 tttgtatttcttatcaaataggattactttttgtccatgttttattttggtctatgtagttgagaacattgtcggatgaaaataaaattgtaatgttgga 329  Q
    ||  |||||||||  ||||| |||||||||||||||  |||| | |||||||||  |||||   |||||||| ||||||||||||||||| |||||||||    
T  41455163 ttcatatttcttacaaaatatgattactttttgtccgcgtttaaatttggtctacatagtttgaaacattgttggatgaaaataaaattgaaatgttgga 41455064  T
Q  330 taaaatttaaaacattgcttaaaaatatgttgtgttttagcttt 373  Q
    | |||||||||||||||  | |||||||||||||||||||||||    
T  41455063 tgaaatttaaaacattg-atgaaaatatgttgtgttttagcttt 41455021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 38 - 373
Target Start/End: Original strand, 28224458 - 28224795
Alignment:
Q  38 aaccaaaccaatccgcaatataagaaaagcacttattaaatatctatcatctaaatcaatactcataaaaattcaatg-aaaactttaataaaatgacaa 136  Q
    ||||||||||| | |||||||||||||| |||| ||||||||| ||||||||| ||||||| ||||| |||||||||  |||| |||||||||||||||     
T  28224458 aaccaaaccaaactgcaatataagaaaaccactaattaaatatatatcatctagatcaataatcatagaaattcaattcaaaattttaataaaatgacat 28224557  T
Q  137 nnnnnnnncttctgttgttaagtttcttttttgct------agcaaaaatgtatttatgtgctacttgaactcttcgataatgattaaaattttagtctt 230  Q
             |||| |||||||||||||| ||||||      | ||| |  || |||||||||||| |||| |||  || |||||||||||||||||||||    
T  28224558 attttt---ttcttttgttaagtttcttctttgctttttctaccaataccgtttttatgtgctacctgaattcta-gagaatgattaaaattttagtctt 28224653  T
Q  231 ttgtatttcttatcaaataggattactttttgtccatgttttattttggtctatgtagttgagaacattgtcggatgaaaataaaattgtaatgttggat 330  Q
    ||||||||||||  |||||    |||| ||||||||  ||||| ||||||||| ||||||   |||| |||  || ||||||||||||||||||||||||    
T  28224654 ttgtatttcttacaaaataaatctactatttgtccacattttaatttggtctacgtagttcgaaacactgttcgacgaaaataaaattgtaatgttggat 28224753  T
Q  331 aaaatttaaaacattgcttaaaaatatgttgtgttttagcttt 373  Q
     |||| |||||||||| || ||||||| |||| |||| |||||    
T  28224754 gaaatgtaaaacattg-ttgaaaatatattgtatttttgcttt 28224795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 175 - 346
Target Start/End: Complemental strand, 34087748 - 34087584
Alignment:
Q  175 aaaaatgtatttatgtgctacttgaactcttcgataatgattaaaattttagtcttttgtatttcttatcaaataggattactttttgtccatgttttat 274  Q
    |||||||| | ||||||||||||||||||||       ||| |||| || |||||||||||||||||   ||||| ||||||||||||| |||||||||     
T  34087748 aaaaatgtgtctatgtgctacttgaactctt-------gataaaaaattcagtcttttgtatttctttcaaaatatgattactttttgtgcatgttttaa 34087656  T
Q  275 tttggtctatgtagttgagaacattgtcggatgaaaataaaattgtaatgttggataaaatttaaaacattg 346  Q
    ||||||||| |||||| ||||||||||  | |||||||| | |||||||||||||| |||||||||| ||||    
T  34087655 tttggtctacgtagttcagaacattgttcggtgaaaatacagttgtaatgttggatgaaatttaaaatattg 34087584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 182 - 373
Target Start/End: Original strand, 17131820 - 17132011
Alignment:
Q  182 tatttatgtgctacttgaactcttcgataatgattaaaattttagtcttttgtatttcttatcaaataggattactttttgtccatgttttat-tttggt 280  Q
    ||||| |||| || ||||||||||  | |||||| |||| |||||||||||||| || |||  ||||   ||||||||||||||| |||| |  ||||||    
T  17131820 tatttttgtggtatttgaactcttaaagaatgataaaaaatttagtcttttgtaatttttacaaaatttaattactttttgtccacgtttaaactttggt 17131919  T
Q  281 ctatgtagttgagaacattgtcggatgaaaataaaattgtaatgttggataaaatttaaaacattgcttaaaaatatgttgtgttttagcttt 373  Q
     |||||||||| | |||||||  |||||||||||||| |||||||||||| |||||||||||||||| | ||||||| |||||||||| ||||    
T  17131920 gtatgtagttgggtacattgtttgatgaaaataaaatcgtaatgttggatgaaatttaaaacattgc-tgaaaatatattgtgttttatcttt 17132011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 182 - 346
Target Start/End: Original strand, 35240564 - 35240728
Alignment:
Q  182 tatttatgtgctacttgaactcttcgataatgattaaaattttagtcttttgtatttcttatcaaataggattactttttgtccatgttttattttggtc 281  Q
    ||||| |||| |||||||||||||  | |||||| |||| |||||||||||||| || |||  ||||   |||||||||||||||||||| | ||||||     
T  35240564 tatttttgtggtacttgaactcttaaagaatgataaaaaatttagtcttttgtaatttttacaaaatttaattactttttgtccatgtttaaatttggtg 35240663  T
Q  282 tatgtagttgagaacattgtcggatgaaaataaaattgtaatgttggataaaatttaaaacattg 346  Q
    || ||||||  | ||||||| ||||||||||||||| |||||||| ||| |||||||||||||||    
T  35240664 tacgtagttaggtacattgttggatgaaaataaaatcgtaatgtttgatgaaatttaaaacattg 35240728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 38 - 312
Target Start/End: Complemental strand, 33793120 - 33792857
Alignment:
Q  38 aaccaaaccaatccgcaatataagaaaagcacttattaaatatctatcatctaaatcaatactcataaaaattcaatgaaaactttaataaaatgacaan 137  Q
    ||||||||||| | |||||||||||||| |||| ||||||||| ||| || || |  ||| || ||| |||||||||||||| |||||||||||||||      
T  33793120 aaccaaaccaaactgcaatataagaaaaacactaattaaatatatattatttagactaatgcttatagaaattcaatgaaaattttaataaaatgacatt 33793021  T
Q  138 nnnnnnncttctgttgttaagtttcttttttgctagcaaaaatgtatttatgtgctacttgaactcttcgataatgattaaaattttagtcttttgtatt 237  Q
           |||||         || ||||||  ||| |||||||||||||||||| |||||| ||||||    ||| |||||||||||| |||||| ||||    
T  33793020 tttttttcttct---------ttgcttttt--ctatcaaaaatgtatttatgtgttacttggactcttaacgaataattaaaattttaatcttttttatt 33792932  T
Q  238 tcttatcaaataggattactttttgtccatgttttattttggtctatgtagttgagaacattgtcggatgaaaat 312  Q
    |||||  ||||| |||| ||||||||||| |||||| ||| ||||| ||||||||||||||||| ||||| ||||    
T  33792931 tcttacaaaatatgattgctttttgtccacgttttaatttagtctacgtagttgagaacattgttggatggaaat 33792857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 182 - 373
Target Start/End: Complemental strand, 14652796 - 14652606
Alignment:
Q  182 tatttatgtgctacttgaactcttcgataatgattaaaattttagtcttttgtatttcttatcaaataggattactttttgtccatgtttt-attttggt 280  Q
    ||||| |||| |||||||| | || || |||||| ||||| ||| ||||||| ||||||||  |||||||||||| | ||||||||||||| |  |||||    
T  14652796 tatttttgtgttacttgaaattttagagaatgat-aaaatcttaatcttttgaatttcttacaaaataggattacatattgtccatgtttttaagttggt 14652698  T
Q  281 ctatgtagttgagaacattgtcggatgaaaataaaattgtaatgttggataaaatttaaaacattgcttaaaaatatgttgtgttttagcttt 373  Q
    |||||| |||   ||||||||   ||||||||||||||||||| || ||| |||||||||||||||| | |||||||||||||||| ||||||    
T  14652697 ctatgttgttcgaaacattgtaaaatgaaaataaaattgtaatatttgatgaaatttaaaacattgc-tgaaaatatgttgtgtttaagcttt 14652606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 182 - 373
Target Start/End: Original strand, 32244116 - 32244307
Alignment:
Q  182 tatttatgtgctacttgaactcttcgataatgattaaaattttagtcttttgtatttcttatcaaataggattactttttgtccatgttttat-tttggt 280  Q
    ||||| |||| || ||||||||||  | |||||| |||| |||||||||||||| || |||  ||||   ||||||||||||||| |||| |  ||||||    
T  32244116 tatttttgtggtatttgaactcttaaagaatgataaaaaatttagtcttttgtaatttttacaaaatttaattactttttgtccacgtttaaactttggt 32244215  T
Q  281 ctatgtagttgagaacattgtcggatgaaaataaaattgtaatgttggataaaatttaaaacattgcttaaaaatatgttgtgttttagcttt 373  Q
     || ||||||| | |||||||  |||||||||||||| |||||||||||| |||||||||||||| | | ||||||| |||||||||| ||||    
T  32244216 gtacgtagttgggtacattgtttgatgaaaataaaatcgtaatgttggatgaaatttaaaacatt-cctgaaaatatattgtgttttatcttt 32244307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 215 - 373
Target Start/End: Complemental strand, 6595293 - 6595134
Alignment:
Q  215 ttaaaattttagtcttttgtatttcttatcaaataggattactttttgtccatgtttt-attttggtctatgtagttgagaacattgtcggatgaaaata 313  Q
    |||||||  |||||||||| ||||||||  |||||||||||| |||| || ||||||| |  |||||||| || ||||  ||||||||   |||||||||    
T  6595293 ttaaaatcctagtcttttgcatttcttagaaaataggattacgttttttcgatgtttttaccttggtctacgttgttggaaacattgtaaaatgaaaata 6595194  T
Q  314 aaattgtaatgttggataaaatttaaaacattgcttaaaaatatgttgtgttttagcttt 373  Q
    |||||||||| ||  || |||||||||||||| || ||||||||||||||||||| ||||    
T  6595193 aaattgtaatatttaatgaaatttaaaacattactgaaaaatatgttgtgttttaacttt 6595134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 182 - 346
Target Start/End: Original strand, 34881065 - 34881230
Alignment:
Q  182 tatttatgtgctacttgaactcttcgataatgattaaaattttagtcttttgtatttcttatcaaataggattactttttgtccatgtttt-attttggt 280  Q
    ||||||||||| ||||||| | || || |||||| ||||| ||||| ||||| ||||||||  ||||| ||||||||||||||||  |||| | |||| |    
T  34881065 tatttatgtgccacttgaatttttagagaatgat-aaaatcttagttttttgcatttcttacaaaatacgattactttttgtccacatttttaatttgtt 34881163  T
Q  281 ctatgta-gttgagaacattgtcggatgaaaataaaattgtaatgttggataaaatttaaaacattg 346  Q
     |||||  |||| |||||| || |||||||||||||||| ||||||||||| |||||||||||||||    
T  34881164 atatgtttgttgggaacatcgttggatgaaaataaaattttaatgttggatgaaatttaaaacattg 34881230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 175 - 373
Target Start/End: Complemental strand, 11402942 - 11402746
Alignment:
Q  175 aaaaatgtatttatgtgctacttgaactcttcgataatgattaaaattttagtcttttgtatttcttatcaaataggattactttttgtccatgtttt-a 273  Q
    ||||| ||||| | |||||||||||| | || || |||||| ||||| ||||||||||   |||||||  ||||| |||||  ||||||||||||||| |    
T  11402942 aaaaacgtattcacgtgctacttgaaatttttgagaatgat-aaaatcttagtcttttacttttcttacaaaatatgattatgttttgtccatgttttta 11402844  T
Q  274 ttttggtctatgtagttgagaacattgtcggatgaaaataaaattgtaatgttggataaaatttaaaacattgcttaaaaatatgttgtgttttagcttt 373  Q
      ||||||||||| |||| |||||||||   |||||||| |||||||||| || |||  ||||||||||||||| | |||||||||||||||| ||||||    
T  11402843 acttggtctatgttgttg-gaacattgtaaaatgaaaatgaaattgtaatatttgatggaatttaaaacattgc-tgaaaatatgttgtgtttcagcttt 11402746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 269 - 346
Target Start/End: Original strand, 31075439 - 31075516
Alignment:
Q  269 ttttattttggtctatgtagttgagaacattgtcggatgaaaataaaattgtaatgttggataaaatttaaaacattg 346  Q
    ||||| |||||||||||| |||| |||||||||  |||||||||||||||||||| |||||| |||||||||||||||    
T  31075439 ttttaatttggtctatgttgttgggaacattgttagatgaaaataaaattgtaatattggatgaaatttaaaacattg 31075516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 217 - 346
Target Start/End: Original strand, 6894177 - 6894307
Alignment:
Q  217 aaaattttagtcttttgtatttcttatcaaataggattactttttgtccatgttttat-tttggtctatgtagttgagaacattgtcggatgaaaataaa 315  Q
    ||||| ||| |||||||||||||  |  ||||| ||||| ||| | |||| ||||| | |||| |||||||||||| ||||||||   ||| ||||||||    
T  6894177 aaaatcttactcttttgtatttccgacaaaataagattattttatatccacgttttttatttgatctatgtagttgcgaacattggtagataaaaataaa 6894276  T
Q  316 attgtaatgttggataaaatttaaaacattg 346  Q
    ||||||||||||||| |||||||||||||||    
T  6894277 attgtaatgttggatgaaatttaaaacattg 6894307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 215 - 373
Target Start/End: Original strand, 691332 - 691488
Alignment:
Q  215 ttaaaattttagtcttttgtatttcttatcaaataggattactttttgtccatgtttt-attttggtctatgtagttgagaacattgtcggatgaaaata 313  Q
    ||||||| ||||| ||||| ||||||||  |||||||||| | ||||||||||||||| |  |||||||||||   ||  || | |||   || ||||||    
T  691332 ttaaaatcttagtattttgcatttcttaaaaaataggattgcgttttgtccatgtttttaacttggtctatgt---tggaaataatgtaaaataaaaata 691428  T
Q  314 aaattgtaatgttggataaaatttaaaacattgcttaaaaatatgttgtgttttagcttt 373  Q
    |||||||||| || ||| ||||| ||||||||||| ||||||||||||||||||| ||||    
T  691429 aaattgtaatttttgatgaaattcaaaacattgctgaaaaatatgttgtgttttaacttt 691488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 38 - 135
Target Start/End: Original strand, 5175229 - 5175326
Alignment:
Q  38 aaccaaaccaatccgcaatataagaaaagcacttattaaatatctatcatctaaatcaatactcataaaaattcaatgaaaactttaataaaatgaca 135  Q
    ||||||||||| ||||||||||| |||| |||| ||||||||| ||| || || |  ||| || |||||||||||||||||| |||||||||||||||    
T  5175229 aaccaaaccaaaccgcaatataaaaaaaacactgattaaatatatattatatagactaatgcttataaaaattcaatgaaaattttaataaaatgaca 5175326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 36 - 135
Target Start/End: Complemental strand, 22553843 - 22553744
Alignment:
Q  36 caaaccaaaccaatccgcaatataagaaaagcacttattaaatatctatcatctaaatcaatactcataaaaattcaatgaaaactttaataaaatgaca 135  Q
    ||||||||||||| |||||| ||||||||| |||| |||||| || | ||| ||| ||||||||||||| ||| ||||| |||||||  |||||||||||    
T  22553843 caaaccaaaccaaaccgcaacataagaaaaacactaattaaacatatctcacctagatcaatactcatagaaactcaattaaaacttctataaaatgaca 22553744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 175 - 266
Target Start/End: Original strand, 40331220 - 40331310
Alignment:
Q  175 aaaaatgtatttatgtgctacttgaactcttcgataatgattaaaattttagtcttttgtatttcttatcaaataggattactttttgtcca 266  Q
    |||||||||||||||||||||||||||| || || ||||| |||||| ||||||||||| ||||||||  ||||| ||||| ||||| ||||    
T  40331220 aaaaatgtatttatgtgctacttgaacttttagagaatga-taaaatcttagtcttttgcatttcttaaaaaataagattattttttatcca 40331310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 257 - 346
Target Start/End: Complemental strand, 12264141 - 12264051
Alignment:
Q  257 tttttgtccatgtt-ttattttggtctatgtagttgagaacattgtcggatgaaaataaaattgtaatgttggataaaatttaaaacattg 346  Q
    |||| ||||||||| ||| |||||| ||||| | |||||||||||| |||||||||| |||||||||| |||||| |||||| ||||||||    
T  12264141 ttttggtccatgttcttaatttggtatatgttgatgagaacattgttggatgaaaatgaaattgtaattttggatgaaatttgaaacattg 12264051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 174 - 263
Target Start/End: Complemental strand, 40692802 - 40692714
Alignment:
Q  174 caaaaatgtatttatgtgctacttgaactcttcgataatgattaaaattttagtcttttgtatttcttatcaaataggattactttttgt 263  Q
    |||||||||||| || ||||||||||||| || |  |||| ||||||| ||||||||||||||||||||  ||||| |||||||||||||    
T  40692802 caaaaatgtattcatatgctacttgaacttttagtgaatg-ttaaaatcttagtcttttgtatttcttacaaaatatgattactttttgt 40692714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 174 - 272
Target Start/End: Complemental strand, 18432435 - 18432338
Alignment:
Q  174 caaaaatgtatttatgtgctacttgaactcttcgataatgattaaaattttagtcttttgtatttcttatcaaataggattactttttgtccatgtttt 272  Q
    ||||||| || |||||||||||||||||| || || |||||| ||| | |||||||||| |||||||||   ||||| |||||||||||||||| ||||    
T  18432435 caaaaatatagttatgtgctacttgaacttttagagaatgat-aaagtcttagtcttttatatttcttacataatagaattactttttgtccatttttt 18432338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 303 - 346
Target Start/End: Complemental strand, 1681340 - 1681297
Alignment:
Q  303 ggatgaaaataaaattgtaatgttggataaaatttaaaacattg 346  Q
    |||||||||||||||||||||||||||| |||||||||| ||||    
T  1681340 ggatgaaaataaaattgtaatgttggatcaaatttaaaatattg 1681297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 48334 - 48300
Alignment:
Q  1 ttttgtaaggatgagttaggcccccaatttcaaca 35  Q
    |||||||||||||||||||||||||||||||||||    
T  48334 ttttgtaaggatgagttaggcccccaatttcaaca 48300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 133
Target Start/End: Complemental strand, 4414707 - 4414609
Alignment:
Q  35 acaaaccaaaccaatccgcaatataagaaaagcacttattaaatatctatcatctaaatcaatactcataaaaattcaatgaaaactttaataaaatga 133  Q
    |||||||||||||| |  ||| ||||||||| || | |||||| || | |||| |||| ||||||| ||| ||| |||||||||||||| |||||||||    
T  4414707 acaaaccaaaccaaactacaacataagaaaaacattaattaaacatatgtcatataaaccaatacttatagaaactcaatgaaaacttttataaaatga 4414609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 257 - 346
Target Start/End: Original strand, 6367663 - 6367753
Alignment:
Q  257 tttttgtccatgtttt-attttggtctatgtagttgagaacattgtcggatgaaaataaaattgtaatgttggataaaatttaaaacattg 346  Q
    |||| ||||||||||| | |||| ||||||| | ||  |||||||| ||||||| |||||||||||||||| |||  ||||||||||||||    
T  6367663 ttttagtccatgtttttaatttgttctatgttgatggaaacattgttggatgaacataaaattgtaatgttagatcgaatttaaaacattg 6367753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 174 - 232
Target Start/End: Original strand, 7591216 - 7591273
Alignment:
Q  174 caaaaatgtatttatgtgctacttgaactcttcgataatgattaaaattttagtctttt 232  Q
    ||||||||| ||||||||||||||||||| || |||||||| |||||| ||||||||||    
T  7591216 caaaaatgtctttatgtgctacttgaacttttagataatga-taaaatcttagtctttt 7591273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 133
Target Start/End: Complemental strand, 38147598 - 38147500
Alignment:
Q  35 acaaaccaaaccaatccgcaatataagaaaagcacttattaaatatctatcatctaaatcaatactcataaaaattcaatgaaaactttaataaaatga 133  Q
    |||||||||||||| || ||| ||||||||| |||| |||||| || | |||  || | ||||| ||||| ||| |||||||||||||| |||||||||    
T  38147598 acaaaccaaaccaaaccccaacataagaaaaacactaattaaacatgtgtcacatagaccaatattcatagaaactcaatgaaaacttttataaaatga 38147500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 41 - 135
Target Start/End: Original strand, 42920640 - 42920734
Alignment:
Q  41 caaaccaatccgcaatataagaaaagcacttattaaatatctatcatctaaatcaatactcataaaaattcaatgaaaactttaataaaatgaca 135  Q
    |||||||| | |||| ||||||||| |  | ||||||||| | ||||||| |||| |||||||| ||| ||||| |||||||| |||||||||||    
T  42920640 caaaccaaactgcaacataagaaaaactttaattaaatatatgtcatctagatcactactcatagaaactcaattaaaacttttataaaatgaca 42920734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 43490486 - 43490452
Alignment:
Q  1 ttttgtaaggatgagttaggcccccaatttcaaca 35  Q
    |||||||||||||||||||||||||||||||||||    
T  43490486 ttttgtaaggatgagttaggcccccaatttcaaca 43490452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 293 - 345
Target Start/End: Original strand, 733881 - 733933
Alignment:
Q  293 gaacattgtcggatgaaaataaaattgtaatgttggataaaatttaaaacatt 345  Q
    ||||||||  ||||||||||||||||||| |||||||| |||||| |||||||    
T  733881 gaacattgctggatgaaaataaaattgtactgttggatcaaatttgaaacatt 733933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 306 - 346
Target Start/End: Complemental strand, 6718818 - 6718778
Alignment:
Q  306 tgaaaataaaattgtaatgttggataaaatttaaaacattg 346  Q
    ||||||||||||||||||||||||| |||||||||| ||||    
T  6718818 tgaaaataaaattgtaatgttggatgaaatttaaaatattg 6718778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 295 - 343
Target Start/End: Complemental strand, 8150851 - 8150803
Alignment:
Q  295 acattgtcggatgaaaataaaattgtaatgttggataaaatttaaaaca 343  Q
    ||||||| ||||||||||||||| |||||||||||| |||||| |||||    
T  8150851 acattgttggatgaaaataaaatcgtaatgttggatcaaatttgaaaca 8150803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 174 - 266
Target Start/End: Original strand, 12378819 - 12378910
Alignment:
Q  174 caaaaatgtatttatgtgctacttgaactcttcgataatgattaaaattttagtcttttgtatttcttatcaaataggattactttttgtcca 266  Q
    |||||||||||||||||||||||| |||| ||  | ||||| |||||| ||||| ||||  ||||||||  |||||| |||| ||||||||||    
T  12378819 caaaaatgtatttatgtgctacttaaacttttaaagaatga-taaaatcttagtattttacatttcttacaaaatagaattaatttttgtcca 12378910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 346
Target Start/End: Original strand, 32721276 - 32721372
Alignment:
Q  251 gattactttttgtccatgtttt-attttggtctatgtagttgagaacattgtcggatgaaaataaaattgtaatgttggataaaatttaaaacattg 346  Q
    |||||| ||||||||| ||||| | |||  |||||||||||  ||| |||||  ||| |||||||||||||||| || ||| |||||||||||||||    
T  32721276 gattacattttgtccaagtttttaatttaatctatgtagttacgaatattgttagataaaaataaaattgtaatatttgatgaaatttaaaacattg 32721372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 873719 - 873684
Alignment:
Q  1 ttttgtaaggatgagttaggcccccaatttcaacac 36  Q
    |||||||||||||||||||||||| |||||||||||    
T  873719 ttttgtaaggatgagttaggccccaaatttcaacac 873684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 2716627 - 2716665
Alignment:
Q  1 ttttgtaaggatgagttaggcccccaatttcaacacaaac 40  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  2716627 ttttgtaaggatgagttagg-ccccaatttcaacacaaac 2716665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 36 - 135
Target Start/End: Complemental strand, 18432575 - 18432476
Alignment:
Q  36 caaaccaaaccaatccgcaatataagaaaagcacttattaaatatctatcatctaaatcaatactcataaaaattcaatgaaaactttaataaaatgaca 135  Q
    |||| |||||||| |||||| |||| |||| || | ||||| | | | ||| ||| | ||||||||||| ||| |||||||||||||| |||||||||||    
T  18432575 caaatcaaaccaaaccgcaacataaaaaaaacattaattaagtctatgtcacctataccaatactcatagaaaatcaatgaaaacttttataaaatgaca 18432476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 134
Target Start/End: Original strand, 2802629 - 2802679
Alignment:
Q  84 tcatctaaatcaatactcataaaaattcaatgaaaactttaataaaatgac 134  Q
    ||||||| | ||||||||||||||| |||| ||||||||| ||||||||||    
T  2802629 tcatctagaccaatactcataaaaactcaacgaaaactttgataaaatgac 2802679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 2908792 - 2908758
Alignment:
Q  1 ttttgtaaggatgagttaggcccccaatttcaaca 35  Q
    |||||||||||||||||||||||| ||||||||||    
T  2908792 ttttgtaaggatgagttaggccccaaatttcaaca 2908758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 3762987 - 3763021
Alignment:
Q  1 ttttgtaaggatgagttaggcccccaatttcaaca 35  Q
    |||||||||||||||||||||||| ||||||||||    
T  3762987 ttttgtaaggatgagttaggccccaaatttcaaca 3763021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 12965269 - 12965235
Alignment:
Q  1 ttttgtaaggatgagttaggcccccaatttcaaca 35  Q
    |||||||||||||||||||||||| ||||||||||    
T  12965269 ttttgtaaggatgagttaggccccaaatttcaaca 12965235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 13413665 - 13413699
Alignment:
Q  1 ttttgtaaggatgagttaggcccccaatttcaaca 35  Q
    |||||||||||||||||||||||| ||||||||||    
T  13413665 ttttgtaaggatgagttaggccccaaatttcaaca 13413699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 13843778 - 13843812
Alignment:
Q  1 ttttgtaaggatgagttaggcccccaatttcaaca 35  Q
    |||||||||||||||||||||||| ||||||||||    
T  13843778 ttttgtaaggatgagttaggccccaaatttcaaca 13843812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 275 - 345
Target Start/End: Complemental strand, 19402431 - 19402361
Alignment:
Q  275 tttggtctatgtagttgagaacattgtcggatgaaaataaaattgtaatgttggataaaatttaaaacatt 345  Q
    |||||||||||| | ||| | |||||| ||||||||||||||||  |||||| |||||||| | |||||||    
T  19402431 tttggtctatgttgatgataccattgttggatgaaaataaaattagaatgttcgataaaatctgaaacatt 19402361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 24994150 - 24994184
Alignment:
Q  1 ttttgtaaggatgagttaggcccccaatttcaaca 35  Q
    |||||||||||||||||||||||| ||||||||||    
T  24994150 ttttgtaaggatgagttaggccccaaatttcaaca 24994184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 34457177 - 34457211
Alignment:
Q  1 ttttgtaaggatgagttaggcccccaatttcaaca 35  Q
    |||||||||||||||||||||||| ||||||||||    
T  34457177 ttttgtaaggatgagttaggccccaaatttcaaca 34457211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 34457384 - 34457418
Alignment:
Q  1 ttttgtaaggatgagttaggcccccaatttcaaca 35  Q
    |||||||||||||||||||||||| ||||||||||    
T  34457384 ttttgtaaggatgagttaggccccaaatttcaaca 34457418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 306 - 368
Target Start/End: Complemental strand, 36760328 - 36760267
Alignment:
Q  306 tgaaaataaaattgtaatgttggataaaatttaaaacattgcttaaaaatatgttgtgtttta 368  Q
    |||||||||||||||||||||| || ||||| ||||  ||| || ||||||||||||||||||    
T  36760328 tgaaaataaaattgtaatgttgaatgaaattaaaaattttg-ttgaaaatatgttgtgtttta 36760267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 38131845 - 38131879
Alignment:
Q  1 ttttgtaaggatgagttaggcccccaatttcaaca 35  Q
    |||||||||||||||||||||||| ||||||||||    
T  38131845 ttttgtaaggatgagttaggccccaaatttcaaca 38131879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 40168882 - 40168848
Alignment:
Q  1 ttttgtaaggatgagttaggcccccaatttcaaca 35  Q
    |||||||||||||||||||||||| ||||||||||    
T  40168882 ttttgtaaggatgagttaggccccaaatttcaaca 40168848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 40169064 - 40169030
Alignment:
Q  1 ttttgtaaggatgagttaggcccccaatttcaaca 35  Q
    |||||||||||||||||||||||| ||||||||||    
T  40169064 ttttgtaaggatgagttaggccccaaatttcaaca 40169030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 94 - 135
Target Start/End: Complemental strand, 6633731 - 6633690
Alignment:
Q  94 caatactcataaaaattcaatgaaaactttaataaaatgaca 135  Q
    ||||||||||| ||| |||||||||||||| |||||||||||    
T  6633731 caatactcatagaaactcaatgaaaacttttataaaatgaca 6633690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 269 - 346
Target Start/End: Original strand, 20191760 - 20191837
Alignment:
Q  269 ttttattttggtctatgtagttgagaacattgtcggatgaaaataaaattgtaatgttggataaaatttaaaacattg 346  Q
    ||||| |||||| ||||| ||| |||| || ||  ||||||||| ||||| ||||||| ||| |||||||||||||||    
T  20191760 ttttaatttggtttatgttgttcagaatatggttagatgaaaatgaaattttaatgttcgatgaaatttaaaacattg 20191837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 308 - 341
Target Start/End: Original strand, 26007227 - 26007260
Alignment:
Q  308 aaaataaaattgtaatgttggataaaatttaaaa 341  Q
    |||||||||||||||||| |||||||||||||||    
T  26007227 aaaataaaattgtaatgtaggataaaatttaaaa 26007260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 29
Target Start/End: Complemental strand, 48127 - 48099
Alignment:
Q  1 ttttgtaaggatgagttaggcccccaatt 29  Q
    |||||||||||||||||||||||||||||    
T  48127 ttttgtaaggatgagttaggcccccaatt 48099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 174 - 242
Target Start/End: Complemental strand, 6633649 - 6633582
Alignment:
Q  174 caaaaatgtatttatgtgctacttgaactcttcgataatgattaaaattttagtcttttgtatttctta 242  Q
    |||||||||||| ||||||||||||||||  | || ||||| |||||| ||| |||||| |||||||||    
T  6633649 caaaaatgtattgatgtgctacttgaacttgtagagaatga-taaaatcttaatcttttatatttctta 6633582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 24918242 - 24918274
Alignment:
Q  1 ttttgtaaggatgagttaggcccccaatttcaa 33  Q
    |||||||||||||||||||||||| ||||||||    
T  24918242 ttttgtaaggatgagttaggccccaaatttcaa 24918274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 175 - 215
Target Start/End: Complemental strand, 25715595 - 25715555
Alignment:
Q  175 aaaaatgtatttatgtgctacttgaactcttcgataatgat 215  Q
    |||||||||||||||||||||||||||| || || ||||||    
T  25715595 aaaaatgtatttatgtgctacttgaacttttagagaatgat 25715555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 174 - 202
Target Start/End: Original strand, 27571795 - 27571823
Alignment:
Q  174 caaaaatgtatttatgtgctacttgaact 202  Q
    |||||||||||||||||||||||||||||    
T  27571795 caaaaatgtatttatgtgctacttgaact 27571823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 28358058 - 28358026
Alignment:
Q  1 ttttgtaaggatgagttaggcccccaatttcaa 33  Q
    |||||||||||||||||||||||| ||||||||    
T  28358058 ttttgtaaggatgagttaggccccaaatttcaa 28358026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 133; Significance: 5e-69; HSPs: 44)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 77 - 373
Target Start/End: Complemental strand, 11219401 - 11219099
Alignment:
Q  77 atatctatcatctaaatcaatactcataaaaattcaatgaaaactttaataaaatgacaannnnnnnncttctgttgttaagtttctt------ttttgc 170  Q
    |||| ||||||||| |||||||||| || ||||||||||||||||||||||||||||||          |||| ||||||||||||||      |||| |    
T  11219401 atatatatcatctagatcaatactcttataaattcaatgaaaactttaataaaatgacatattttt---ttcttttgttaagtttcttcttggttttttc 11219305  T
Q  171 tagcaaaaatgtatttatgtgctacttgaactcttcgataatgattaaaattttagtcttttgtatttcttatcaaataggattactttttgtccatgtt 270  Q
    || |||||||||||||||||| ||||||||||||| || ||||||||||||||||||||| |||||||||||  |||||||||||||||||||| | |||    
T  11219304 tatcaaaaatgtatttatgtgttacttgaactcttagagaatgattaaaattttagtcttgtgtatttcttacaaaataggattactttttgtctacgtt 11219205  T
Q  271 ttattttggtctatgtagttgagaacattgtcggatg---aaaataaaattgtaatgttggataaaatttaaaacattgcttaaaaatatgttgtgtttt 367  Q
    ||| ||||||||  ||||||||||||||||| | |||   | ||||||||| ||||||||||| ||||||||||||||||| |||||||||||| |||||    
T  11219204 ttaatttggtctgcgtagttgagaacattgttgtatggaaataataaaattttaatgttggatgaaatttaaaacattgctgaaaaatatgttgcgtttt 11219105  T
Q  368 agcttt 373  Q
    ||||||    
T  11219104 agcttt 11219099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 37 - 373
Target Start/End: Original strand, 24681685 - 24682017
Alignment:
Q  37 aaaccaaaccaatccgcaatataagaaaagcacttattaaatatctatcatctaaatcaatactcataaaaattcaatgaaaactttaataaaatgacaa 136  Q
    |||||||| ||| || ||||||||||||| |||| ||||||||| ||||||||| ||||||| | ||||||| |||||| |||||||||||||||||||     
T  24681685 aaaccaaaacaaaccacaatataagaaaaacactaattaaatatatatcatctagatcaataattataaaaactcaatggaaactttaataaaatgacat 24681784  T
Q  137 nnnnnnnncttctgttgttaagtttcttttttg------ctagcaaaaatgtatttatgtgctacttgaactcttcgataatgattaaaattttagtctt 230  Q
             |||| |||||||||||||| ||||      ||| |||||||||||||||||||||||||||||||| || |||||||||||||||||||||    
T  24681785 attttt---ttctcttgttaagtttcttctttgttttttctatcaaaaatgtatttatgtgctacttgaactcttagagaatgattaaaattttagtctt 24681881  T
Q  231 ttgtatttcttatcaaataggattactttttgtccatgttttattttggtctatgtagttgagaacattgtcggatgaaaataaaattgtaatgttggat 330  Q
    || |||||||||  |||||||| ||||||||||||| |||||| |||||||||       | || |||||| ||||||||| | |||| |||||||||||    
T  24681882 ttatatttcttacaaaataggagtactttttgtccacgttttaatttggtcta------cgggagcattgttggatgaaaaaagaattataatgttggat 24681975  T
Q  331 aaaatttaaaacattgcttaaaaatatgttgtgttttagcttt 373  Q
     ||||||||||||||  ||  ||||||||||||||||| ||||    
T  24681976 gaaatttaaaacatt-tttgtaaatatgttgtgttttaccttt 24682017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 38 - 373
Target Start/End: Complemental strand, 13325786 - 13325448
Alignment:
Q  38 aaccaaaccaatccgcaatataagaaaagcacttattaaatatctatcat--ctaaatcaatactcataaaaattcaatgaaaactttaataaaatgaca 135  Q
    ||||||||||| |||||||||||||||| || | ||||||||| ||| ||  ||| | ||||||||||| |||||||||| | | |||||||||||||||    
T  13325786 aaccaaaccaaaccgcaatataagaaaaacaataattaaatatatattatatctagaccaatactcatagaaattcaatggagattttaataaaatgaca 13325687  T
Q  136 annnnnnnncttctg-ttgttaagtttcttttttgct------agcaaaaatgtatttatgtgctacttgaactcttcgataatgattaaaattttagtc 228  Q
    |         ||||  || ||||||||||| ||||||      | ||||||| ||| |||||||||||||||||||| || |||||||||||||||||||    
T  13325686 atttt-----ttctcctttttaagtttcttctttgctcttcctatcaaaaatatatatatgtgctacttgaactcttagagaatgattaaaattttagtc 13325592  T
Q  229 ttttgtatttcttatcaaataggattactttttgtccatgttttattttggtctatgtagttgagaacattgtcggatgaaaataaaattgtaatgttgg 328  Q
    ||||| ||||||||  ||||| ||||||||||||| || |||||| |||||||||  ||||||||||||||||  |||| ||||||||||||||||||||    
T  13325591 ttttgcatttcttacaaaatatgattactttttgttcacgttttaatttggtctacttagttgagaacattgttagatggaaataaaattgtaatgttgg 13325492  T
Q  329 ataaaatttaaaacattgcttaaaaatatgttgtgttttagcttt 373  Q
    || ||||||||||||| || | |||||||||||| ||||| ||||    
T  13325491 atgaaatttaaaacatcgc-tgaaaatatgttgtattttaacttt 13325448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 50 - 373
Target Start/End: Original strand, 12193073 - 12193397
Alignment:
Q  50 ccgcaatataagaaaagcacttattaaatatctatcatctaaatcaatactcataaaaattcaatgaaaactttaataaaatgacaannnnnnnncttct 149  Q
    |||||||||||||| | || | ||||||||| ||||| ||| | ||||||||||| |||||||||| |||||||||||||||||||          || |    
T  12193073 ccgcaatataagaagaacattaattaaatatatatcacctagaccaatactcatagaaattcaatggaaactttaataaaatgacatttt------tttt 12193166  T
Q  150 gttgttaagtttcttttttgct------agcaaaaatgtatttatgtgctacttgaactcttcgataatgatta--aaattttagtcttttgtatttctt 241  Q
     ||||||||||| || ||||||      | |||||||||||||||||||||||||||||||   | |||||| |  ||| ||||||||||||||||||||    
T  12193167 cttgttaagttttttctttgctttttctatcaaaaatgtatttatgtgctacttgaactctcaaagaatgataagaaaaatttagtcttttgtatttctt 12193266  T
Q  242 atcaaataggattactttttgtccatgttttattttggtctatgtagttgagaacattgtcggatgaaaataaaattgtaatgttggataaaatttaaaa 341  Q
    |  ||||| ||||||||||| | || |||||| ||||||||| || ||| ||||||||||  |||||||||| ||| |||||||||||||||||||||||    
T  12193267 acaaaatatgattactttttatgcacgttttaatttggtctacgttgtttagaacattgttcgatgaaaatataatggtaatgttggataaaatttaaaa 12193366  T
Q  342 cattgcttaaaaatatgttgtgttttagcttt 373  Q
    |||||| | |||||||||||||||||||||||    
T  12193367 cattgc-tgaaaatatgttgtgttttagcttt 12193397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 50 - 373
Target Start/End: Original strand, 12437501 - 12437825
Alignment:
Q  50 ccgcaatataagaaaagcacttattaaatatctatcatctaaatcaatactcataaaaattcaatgaaaactttaataaaatgacaannnnnnnncttct 149  Q
    |||||||||||||| | || | ||||||||| ||||| ||| | ||||||||||| |||||||||| |||||||||||||||||||          || |    
T  12437501 ccgcaatataagaagaacattaattaaatatatatcacctagaccaatactcatagaaattcaatggaaactttaataaaatgacatttt------tttt 12437594  T
Q  150 gttgttaagtttcttttttgct------agcaaaaatgtatttatgtgctacttgaactcttcgataatgatta--aaattttagtcttttgtatttctt 241  Q
     ||||||||||| || ||||||      | |||||||||||||||||||||||||||||||   | |||||| |  ||| ||||||||||||||||||||    
T  12437595 cttgttaagttttttctttgctttttctatcaaaaatgtatttatgtgctacttgaactctcaaagaatgataagaaaaatttagtcttttgtatttctt 12437694  T
Q  242 atcaaataggattactttttgtccatgttttattttggtctatgtagttgagaacattgtcggatgaaaataaaattgtaatgttggataaaatttaaaa 341  Q
    |  ||||| ||||||||||| | || |||||| ||||||||| || ||| ||||||||||  |||||||||| ||| |||||||||||||||||||||||    
T  12437695 acaaaatatgattactttttatgcacgttttaatttggtctacgttgtttagaacattgttcgatgaaaatataatggtaatgttggataaaatttaaaa 12437794  T
Q  342 cattgcttaaaaatatgttgtgttttagcttt 373  Q
    |||||| | |||||||||||||||||||||||    
T  12437795 cattgc-tgaaaatatgttgtgttttagcttt 12437825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 36 - 373
Target Start/End: Original strand, 22810785 - 22811116
Alignment:
Q  36 caaaccaaaccaatccgcaatataagaaaagcacttattaaatatctatcatctaaatcaatactcataaaaattcaatgaaaactttaataaaatgaca 135  Q
    ||||||||| ||| || ||||||||||||| |||| ||||||||| ||||||||| | ||||||||||| ||| |||| | ||| |||||||||||||||    
T  22810785 caaaccaaatcaaaccacaatataagaaaaacactaattaaatatatatcatctagaccaatactcatagaaactcaacggaaattttaataaaatgaca 22810884  T
Q  136 annnnnnnncttctgttgttaagtttcttttttgct------agcaaaaatgtatttatgtgctacttgaactcttcgataatgattaaaattttagtct 229  Q
             ||||  || |||||||| ||| |||||      | ||||||||||||||||||||||||||||||||  | |||||||||||||||| |||    
T  22810885 -ttttttttcttcactttttaagtttatttcttgctttttctatcaaaaatgtatttatgtgctacttgaactcttatagaatgattaaaattttaatct 22810983  T
Q  230 tttgtatttcttatcaaataggattactttttgtccatgttttattttggtctatgtagttgagaacattgtcggatgaaaataaaattgtaatgttgga 329  Q
    |||||||||||||  |||||  | ||||||||||||| |||||| ||||||||| ||||||| ||||||||| ||||| ||||||||||||        |    
T  22810984 tttgtatttcttacaaaata-aaatactttttgtccacgttttaatttggtctacgtagttgtgaacattgttggatggaaataaaattgt--------a 22811074  T
Q  330 taaaatttaaaacattgcttaaaaatatgttgtgttttagcttt 373  Q
    | |||||||||| |||||  ||||||||||||||||||||||||    
T  22811075 tgaaatttaaaatattgc--aaaaatatgttgtgttttagcttt 22811116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 174 - 373
Target Start/End: Complemental strand, 4785586 - 4785388
Alignment:
Q  174 caaaaatgtatttatgtgctacttgaactcttcgataatgattaaaattttagtcttttgtatttcttatcaaataggattactttttgtccatgtttta 273  Q
    ||||||||||||||||| |||||||||||||| ||||||||| |||| |||||||||||||||||||||  || | ||||||||||||||||| ||||||    
T  4785586 caaaaatgtatttatgttctacttgaactcttagataatgataaaaaatttagtcttttgtatttcttacaaagttggattactttttgtccacgtttta 4785487  T
Q  274 ttttggtctatgtagttgagaacattgtcggatg-aaaataaaattgtaatgttggataaaatttaaaacattgcttaaaaatatgttgtgttttagctt 372  Q
     ||| ||||| ||||||| ||| |||||  |||| |||||||||||||||||||| || |||||||||  ||||| ||||||||| |||||||||| |||    
T  4785486 atttagtctacgtagttgggaatattgt-tgatgaaaaataaaattgtaatgttgaatgaaatttaaagtattgc-taaaaatatattgtgttttaactt 4785389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 165 - 373
Target Start/End: Original strand, 37162379 - 37162583
Alignment:
Q  165 ttttgctagcaaaaatgtatttatgtgctacttgaactcttcgataatgattaaaattttagtcttttgtatttcttatcaaataggattactttttgtc 264  Q
    |||| ||| |||||||||||||||||| ||||||||||||| || ||||||||||||||||||||||||||||| |||  ||||| ||||||||||||||    
T  37162379 tttttctatcaaaaatgtatttatgtgttacttgaactcttagagaatgattaaaattttagtcttttgtattt-ttacaaaataagattactttttgtc 37162477  T
Q  265 catgttttattttggtctatgtagttgagaacattgtcggatgaaaataaaattgtaatgttggataaaatttaaaacattgcttaaaaatatgttgtgt 364  Q
    || |||||| |||| | || |||  |||||||||||| ||||| |||||||||| |||||||   | |||||||||||||||| | ||||||| ||||||    
T  37162478 cacgttttaatttgatatacgta--tgagaacattgttggatggaaataaaattataatgtttagtgaaatttaaaacattgc-tgaaaatatattgtgt 37162574  T
Q  365 tttagcttt 373  Q
    |||| ||||    
T  37162575 tttaacttt 37162583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 182 - 373
Target Start/End: Complemental strand, 11017349 - 11017159
Alignment:
Q  182 tatttatgtgctacttgaactcttcgataatgattaaaattttagtcttttgtatttcttatcaaataggattactttttgtccatgttttattttggtc 281  Q
    ||||| |||| |||||||||||||  | |||||| |||| |||||||||||||| || |||  ||||   ||||||||||||||| |||| | | ||||     
T  11017349 tatttttgtggtacttgaactcttaaagaatgataaaaaatttagtcttttgtaatttttacaaaatttaattactttttgtccacgtttaaatctggtg 11017250  T
Q  282 tatgtagttgagaacattgtcggatgaaaataaaattgtaatgttggataaaatttaaaacattgcttaaaaatatgttgtgttttagcttt 373  Q
    || ||||||| | |||||||  ||||||||||||||  ||||||||||| |||||||||||||||| | |||||||||||||||||| ||||    
T  11017249 tacgtagttgggtacattgttcgatgaaaataaaatcataatgttggatgaaatttaaaacattgc-tgaaaatatgttgtgttttatcttt 11017159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 186 - 373
Target Start/End: Complemental strand, 33566275 - 33566101
Alignment:
Q  186 tatgtgctacttgaactcttcgataatgattaaaattttagtcttttgtatttcttatcaaataggattactttttgtccatgttttattttggtctatg 285  Q
    |||||||||||||||||||| || ||||||  |||||||||||||||||||||||||  || | | ||||||||||||||| |||||| ||||| ||       
T  33566275 tatgtgctacttgaactctttgagaatgatataaattttagtcttttgtatttcttacaaagttgaattactttttgtccacgttttaatttgggct--- 33566179  T
Q  286 tagttgagaacattgtcggatgaaaataaaattgtaatgttggataaaatttaaaacattgcttaaaaatatgttgtgttttagcttt 373  Q
             |||| || |||||||||||||||| ||||||||||| |||||||||||||| | | |||||||||||||||||||||||    
T  33566178 ---------acatagttggatgaaaataaaattataatgttggatgaaatttaaaacattac-tgaaaatatgttgtgttttagcttt 33566101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 175 - 366
Target Start/End: Complemental strand, 40436782 - 40436593
Alignment:
Q  175 aaaaatgtatttatgtgctacttgaactcttcgataatgattaaaattttagtcttttgtatttcttatcaaataggattactttttgtccatgtttt-a 273  Q
    ||||| |||||||||||||| || || | || || |||||| ||||| ||||||||||  ||||||||| ||||| |||||| ||||||||||||||| |    
T  40436782 aaaaacgtatttatgtgctatttaaaattttagagaatgat-aaaatcttagtctttttcatttcttataaaatatgattacattttgtccatgttttta 40436684  T
Q  274 ttttggtctatgtagttgagaacattgtcggatgaaaataaaattgtaatgttggataaaatttaaaacattgcttaaaaatatgttgtgttt 366  Q
      ||||||||||| ||||| ||||||||   |||||||| |||||||||| || ||| |||||||||||||||||   |||||||||||||||    
T  40436683 acttggtctatgttgttgaaaacattgtaaaatgaaaatgaaattgtaatatttgatgaaatttaaaacattgct--gaaatatgttgtgttt 40436593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 174 - 369
Target Start/End: Original strand, 9012572 - 9012766
Alignment:
Q  174 caaaaatgtatttatgtgctacttgaactcttcgataatgattaaaattttagtcttttgtatttcttatcaaataggattactttttgtccatgtttt- 272  Q
    |||| ||||||||||||||||||| |||| || || |||||| ||||| ||||  ||||| ||||||||  ||||| |||||||||||||| | |||||     
T  9012572 caaagatgtatttatgtgctacttaaacttttagagaatgat-aaaatcttagctttttgcatttcttacaaaataagattactttttgtcaacgttttt 9012670  T
Q  273 attttggtctatgtagttgagaacattgtcggatgaaaataaaattgtaatgttggataaaatttaaaacattgcttaaaaatatgttgtgttttag 369  Q
    | || | | ||||||||||  |||||||| |||| ||||||||||||||||||| ||| ||||||||||||||  || ||||||| |||||||||||    
T  9012671 aattagatatatgtagttgccaacattgttggataaaaataaaattgtaatgttcgatgaaatttaaaacatt-attgaaaatattttgtgttttag 9012766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 182 - 373
Target Start/End: Original strand, 36340490 - 36340681
Alignment:
Q  182 tatttatgtgctacttgaactcttcgataatgattaaaattttagtcttttgtatttcttatcaaataggattactttttgtccatgttttat-tttggt 280  Q
    ||||| |||| || ||||||||||  | |||||| |||| |||||||||||||| || |||  ||||   ||||||||||||||| |||| |  ||||||    
T  36340490 tatttttgtggtatttgaactcttaaagaatgataaaaaatttagtcttttgtaatttttacaaaatttaattactttttgtccacgtttaaactttggt 36340589  T
Q  281 ctatgtagttgagaacattgtcggatgaaaataaaattgtaatgttggataaaatttaaaacattgcttaaaaatatgttgtgttttagcttt 373  Q
     || ||||||| | |||||||  |||||||||||||| |||||||||||| |||||||||||||||| | ||||||| |||||||||| ||||    
T  36340590 gtacgtagttgggtacattgtttgatgaaaataaaatcgtaatgttggatgaaatttaaaacattgc-tgaaaatatattgtgttttatcttt 36340681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 175 - 346
Target Start/End: Complemental strand, 41346255 - 41346084
Alignment:
Q  175 aaaaatgtatttatgtgctacttgaactcttcgataatgattaaaattttagtcttttgtatttcttatcaaataggattactttttgtccatgtt-tta 273  Q
    ||||||||||||||||| |||||||| | || |||| |||| ||||| | | |||||||||||||||   ||||| ||||||||||||||||  || |||    
T  41346255 aaaaatgtatttatgtgttacttgaatttttagatagtgat-aaaatctcaatcttttgtatttctttcaaaataagattactttttgtccacattatta 41346157  T
Q  274 ttttggtctatgtagttgagaacattgtcggatgaaaataaaattgtaatgttggataaaatttaaaacattg 346  Q
    ||||| | |||||||  | |||| |||| | |||||||| |||||||||||||||||||||||| ||||||||    
T  41346156 ttttgttatatgtagcagggaacgttgttgaatgaaaatgaaattgtaatgttggataaaattttaaacattg 41346084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 178 - 373
Target Start/End: Original strand, 18755065 - 18755261
Alignment:
Q  178 aatgtatttatgtgctacttgaactcttcgataatgattaaaattttagtcttttgta-tttcttatcaaataggattactttttgtc---catgtttta 273  Q
    ||||||||||||| |||||||||| ||| || |||||| ||||| ||||||| ||||| ||| |||  ||||| ||||||||||||||   ||| |||||    
T  18755065 aatgtatttatgttctacttgaacacttagagaatgatgaaaatcttagtctattgtatttttttagaaaatatgattactttttgtctaacat-tttta 18755163  T
Q  274 ttttggtctatgtagttgagaacattgtcggatgaaaataaaattgtaatgttggataaaatttaaaacattgcttaaaaatatgttgtgttttagcttt 373  Q
     | |||| |||||||||| ||| |||||  ||| ||||| ||||||||||||| ||| |||||||||| |||  || |||||||||||||||||| ||||    
T  18755164 atatggtttatgtagttg-gaatattgttagataaaaatgaaattgtaatgtttgatgaaatttaaaatatt-tttgaaaatatgttgtgttttaacttt 18755261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 36 - 310
Target Start/End: Complemental strand, 1271619 - 1271352
Alignment:
Q  36 caaaccaaaccaatccgcaatataagaaaagcacttattaaatatctatcatctaaatcaatactcataaaaattcaatgaaaactttaataaaatgaca 135  Q
    ||||||||||||| |||||||||||||||| |||| |||||||||  ||||  || | ||||||||||| ||| |||||| ||||||||||||||||| |    
T  1271619 caaaccaaaccaaaccgcaatataagaaaaacactaattaaatatacatcacttagaccaatactcatagaaactcaatggaaactttaataaaatgata 1271520  T
Q  136 annnnnnnncttctgttgttaagtttctt------ttttgctagcaaaaatgtatttatgtgctacttgaactcttcgataatgattaaaattttagtct 229  Q
              |||| ||||||||||||||      |||| ||   ||| |||||||||||| ||||||||        | ||||| ||||| | ||||||    
T  1271519 ----tattttttctcttgttaagtttcttctttgcttttactttaaaacatgtatttatgtactacttga--------agaatga-taaaaatctagtct 1271433  T
Q  230 tttgtatttcttatcaaataggattactttttgtccatgttttattttggtctatgtagttgagaacattgtcggatgaaa 310  Q
    |||||||||||||  ||||| |||||||||||||||  |||| | ||||||||| | ||||||||||||||| ||||||||    
T  1271432 tttgtatttcttacaaaatatgattactttttgtccgcgtttaaatttggtctacgcagttgagaacattgttggatgaaa 1271352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 36 - 272
Target Start/End: Complemental strand, 28441955 - 28441718
Alignment:
Q  36 caaaccaaaccaatccg-caatataagaaaagcacttattaaatatctatcatctaaatcaatactcataaaaattcaatgaaaactttaataaaatgac 134  Q
    ||||||||||||| ||| |||||||||||||  | | || |||||| ||| |  || ||||||||||||||||| |||||||||||||| ||||||||||    
T  28441955 caaaccaaaccaaaccggcaatataagaaaaa-attaatcaaatatatataacatagatcaatactcataaaaactcaatgaaaacttttataaaatgac 28441857  T
Q  135 aannnnnnnncttctgttgttaagtttcttttttgctag------caaaaatgtatttatgtgctacttgaactcttcgataatgattaaaattttagtc 228  Q
    |          |||| |||||||||||||| |||| |        ||||||||  ||||||||||||||||||| || ||||||||| ||||||||||||    
T  28441856 atattct----ttcttttgttaagtttcttctttgttttttatttcaaaaatggttttatgtgctacttgaacttttagataatgat-aaaattttagtc 28441762  T
Q  229 ttttgtatttcttatcaaataggattactttttgtccatgtttt 272  Q
    ||||| ||||||||  ||||| ||||||||||| |||| |||||    
T  28441761 ttttgcatttcttaaaaaatacgattactttttttccacgtttt 28441718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 37 - 131
Target Start/End: Original strand, 3155622 - 3155716
Alignment:
Q  37 aaaccaaaccaatccgcaatataagaaaagcacttattaaatatctatcatctaaatcaatactcataaaaattcaatgaaaactttaataaaat 131  Q
    |||||||||||| |||||| |||| |||| |||| ||||||||| ||| |  || || |||||||||| ||| |||||||||||||| |||||||    
T  3155622 aaaccaaaccaaaccgcaacataaaaaaaacactaattaaatatatataacatagataaatactcatagaaactcaatgaaaacttttataaaat 3155716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 275 - 368
Target Start/End: Original strand, 30253954 - 30254046
Alignment:
Q  275 tttggtctatgtagttgagaacattgtcggatgaaaataaaattgtaatgttggataaaatttaaaacattgcttaaaaatatgttgtgtttta 368  Q
    |||| |||| |||| || ||||||||| ||||| ||| ||| |||||| ||||||| ||||||||||||||| || |||||| |||||||||||    
T  30253954 tttgatctacgtagctgggaacattgttggatggaaaaaaatttgtaaagttggatgaaatttaaaacattg-ttgaaaataggttgtgtttta 30254046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 303 - 346
Target Start/End: Original strand, 28073070 - 28073113
Alignment:
Q  303 ggatgaaaataaaattgtaatgttggataaaatttaaaacattg 346  Q
    |||||||||||||||||||| ||||||| |||||||||||||||    
T  28073070 ggatgaaaataaaattgtaacgttggatcaaatttaaaacattg 28073113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 306 - 373
Target Start/End: Complemental strand, 6591448 - 6591384
Alignment:
Q  306 tgaaaataaaattgtaatgttggataaaatttaaaacattgcttaaaaatatgttgtgttttagcttt 373  Q
    ||||||||||||||||||||||||| ||||| |||| |||| | |||   ||||||||||||||||||    
T  6591448 tgaaaataaaattgtaatgttggatgaaattaaaaatattgttgaaa---atgttgtgttttagcttt 6591384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 306 - 347
Target Start/End: Original strand, 7428293 - 7428334
Alignment:
Q  306 tgaaaataaaattgtaatgttggataaaatttaaaacattgc 347  Q
    ||||||||||||||||||||| ||| ||||||||||||||||    
T  7428293 tgaaaataaaattgtaatgttagatgaaatttaaaacattgc 7428334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 332 - 368
Target Start/End: Original strand, 31497492 - 31497528
Alignment:
Q  332 aaatttaaaacattgcttaaaaatatgttgtgtttta 368  Q
    ||||||||||||||||| |||||||||||||||||||    
T  31497492 aaatttaaaacattgctgaaaaatatgttgtgtttta 31497528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 216 - 337
Target Start/End: Original strand, 29914373 - 29914495
Alignment:
Q  216 taaaattttagtcttttgtatttcttatcaaataggattactttttg-tccatg-ttttattttggtctatgtagttgagaacattgtcggatgaaaata 313  Q
    ||||||||||||| ||||||||||||| |||| |  |||  |||||| |||||| ||||| |||||| ||||| | ||  |||||||  ||||| |||||    
T  29914373 taaaattttagtcatttgtatttcttaccaaagataattgttttttgatccatgtttttaatttggtatatgttgatggaaacattgatggatg-aaata 29914471  T
Q  314 aaattgtaatgttggataaaattt 337  Q
    ||||||||||||| ||| ||||||    
T  29914472 aaattgtaatgttagatcaaattt 29914495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 96 - 135
Target Start/End: Original strand, 30252726 - 30252765
Alignment:
Q  96 atactcataaaaattcaatgaaaactttaataaaatgaca 135  Q
    ||||||||| || |||||||||||||||||||||||||||    
T  30252726 atactcatataatttcaatgaaaactttaataaaatgaca 30252765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 7621975 - 7622009
Alignment:
Q  1 ttttgtaaggatgagttaggcccccaatttcaaca 35  Q
    |||||||||||||||||||||||| ||||||||||    
T  7621975 ttttgtaaggatgagttaggccccaaatttcaaca 7622009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 10989057 - 10989023
Alignment:
Q  1 ttttgtaaggatgagttaggcccccaatttcaaca 35  Q
    |||||||||||||||||||||||| ||||||||||    
T  10989057 ttttgtaaggatgagttaggccccaaatttcaaca 10989023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 10989264 - 10989230
Alignment:
Q  1 ttttgtaaggatgagttaggcccccaatttcaaca 35  Q
    |||||||||||||||||||||||| ||||||||||    
T  10989264 ttttgtaaggatgagttaggccccaaatttcaaca 10989230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 37 - 135
Target Start/End: Original strand, 12073818 - 12073916
Alignment:
Q  37 aaaccaaaccaatccgcaatataagaaaagcacttattaaatatctatcatctaaatcaatactcataaaaattcaatgaaaactttaataaaatgaca 135  Q
    |||||||||||||   ||| |||| ||||  || |||||||||| | ||| ||| | ||||||||||||||| | |||||||||||| | |||||||||    
T  12073818 aaaccaaaccaattaacaacataataaaaaaacatattaaatatttgtcacctagaccaatactcataaaaacttaatgaaaacttttacaaaatgaca 12073916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 16454658 - 16454624
Alignment:
Q  1 ttttgtaaggatgagttaggcccccaatttcaaca 35  Q
    |||||||||||||||||||||||| ||||||||||    
T  16454658 ttttgtaaggatgagttaggccccaaatttcaaca 16454624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 18905937 - 18905971
Alignment:
Q  1 ttttgtaaggatgagttaggcccccaatttcaaca 35  Q
    |||||||||||||||||||||||| ||||||||||    
T  18905937 ttttgtaaggatgagttaggccccaaatttcaaca 18905971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 20760683 - 20760649
Alignment:
Q  1 ttttgtaaggatgagttaggcccccaatttcaaca 35  Q
    |||||||||||||||||||||||| ||||||||||    
T  20760683 ttttgtaaggatgagttaggccccaaatttcaaca 20760649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 32
Target Start/End: Original strand, 25186491 - 25186521
Alignment:
Q  2 tttgtaaggatgagttaggcccccaatttca 32  Q
    |||||||||||||||||||||||||||||||    
T  25186491 tttgtaaggatgagttaggcccccaatttca 25186521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 30066063 - 30066097
Alignment:
Q  1 ttttgtaaggatgagttaggcccccaatttcaaca 35  Q
    |||||||||||||||||||||||| ||||||||||    
T  30066063 ttttgtaaggatgagttaggccccaaatttcaaca 30066097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 30176487 - 30176453
Alignment:
Q  1 ttttgtaaggatgagttaggcccccaatttcaaca 35  Q
    |||||||||||||||||||||||| ||||||||||    
T  30176487 ttttgtaaggatgagttaggccccgaatttcaaca 30176453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 31767061 - 31767095
Alignment:
Q  1 ttttgtaaggatgagttaggcccccaatttcaaca 35  Q
    |||||||||||||||||||||||| ||||||||||    
T  31767061 ttttgtaaggatgagttaggccccaaatttcaaca 31767095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 32931482 - 32931516
Alignment:
Q  1 ttttgtaaggatgagttaggcccccaatttcaaca 35  Q
    |||||||||||||||||||||||| ||||||||||    
T  32931482 ttttgtaaggatgagttaggccccaaatttcaaca 32931516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 36997247 - 36997281
Alignment:
Q  1 ttttgtaaggatgagttaggcccccaatttcaaca 35  Q
    |||||||||||||||||||||||| ||||||||||    
T  36997247 ttttgtaaggatgagttaggccccaaatttcaaca 36997281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 43599392 - 43599426
Alignment:
Q  1 ttttgtaaggatgagttaggcccccaatttcaaca 35  Q
    |||||||||||||||||||||||| ||||||||||    
T  43599392 ttttgtaaggatgagttaggccccaaatttcaaca 43599426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 43599553 - 43599587
Alignment:
Q  1 ttttgtaaggatgagttaggcccccaatttcaaca 35  Q
    |||||||||||||||||||||||| ||||||||||    
T  43599553 ttttgtaaggatgagttaggccccaaatttcaaca 43599587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 43984339 - 43984305
Alignment:
Q  1 ttttgtaaggatgagttaggcccccaatttcaaca 35  Q
    |||||||||||||||||||||||| ||||||||||    
T  43984339 ttttgtaaggatgagttaggccccaaatttcaaca 43984305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 266
Target Start/End: Original strand, 30253501 - 30253577
Alignment:
Q  189 gtgctacttgaactcttcgataatgattaaaattttagtcttttgtatttcttatcaaataggattactttttgtcca 266  Q
    |||||| ||||| |||| || ||| ||||||| |||||||||| | |||||| |  ||||||||||||||||||||||    
T  30253501 gtgctaattgaattcttagagaataattaaaactttagtcttt-gaatttctaacaaaataggattactttttgtcca 30253577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 270 - 335
Target Start/End: Original strand, 32063973 - 32064038
Alignment:
Q  270 tttattttggtctatgtagttgagaacattgtcggatgaaaataaaattgtaatgttggataaaat 335  Q
    |||| |||||||||||| || ||| || ||||  ||||||||| |||||||| |||||||||||||    
T  32063973 tttaatttggtctatgttgtagaggacgttgttagatgaaaatgaaattgtagtgttggataaaat 32064038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 174 - 202
Target Start/End: Original strand, 3129386 - 3129414
Alignment:
Q  174 caaaaatgtatttatgtgctacttgaact 202  Q
    |||||||||||||||||||||||||||||    
T  3129386 caaaaatgtatttatgtgctacttgaact 3129414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 131; Significance: 7e-68; HSPs: 45)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 38 - 373
Target Start/End: Complemental strand, 9686532 - 9686198
Alignment:
Q  38 aaccaaaccaatccgcaatataagaaaagcacttattaaatatctatcatctaaatcaatactcataaaaattcaatgaaaactttaataaaatgacaan 137  Q
    ||||||||||| | ||||| |||||||| |||| ||||||||| ||||||||| ||||||||||||| |||||||||||||||||||||||||| | |      
T  9686532 aaccaaaccaaactgcaatgtaagaaaaacactaattaaatatatatcatctagatcaatactcatagaaattcaatgaaaactttaataaaataaaata 9686433  T
Q  138 nnnnnnncttctgttgttaagtttcttttttgct-------agcaaaaatgtatttatgtgctacttgaactcttcgataatgattaaaattttagtctt 230  Q
            |||| |||||||||||||| ||||||       |  ||||||||||||||||||||||||||||||| || |||||||||||||||||||||    
T  9686432 tttt----ttctcttgttaagtttcttctttgcttttctataaaaaaaatgtatttatgtgctacttgaactcttagagaatgattaaaattttagtctt 9686337  T
Q  231 ttgtatttcttatcaaataggattactttttgtccatgttttattttggtctatgtagttgagaacattgtcggatgaaaataaaattgtaatgttggat 330  Q
    |  |||||||||| ||||| || ||| ||||||||| |||||| ||||||||| || |||  ||||||||| |||||||||||||||||||||||   ||    
T  9686336 taatatttcttattaaataagaatacattttgtccaagttttaatttggtctacgttgttaggaacattgttggatgaaaataaaattgtaatgt---at 9686240  T
Q  331 aaaatttaaaacattgcttaaaaatatgttgtgttttagcttt 373  Q
     ||||||||||||||| || |||||| ||||||||||||||||    
T  9686239 gaaatttaaaacattg-ttgaaaataagttgtgttttagcttt 9686198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 43 - 369
Target Start/End: Complemental strand, 6400306 - 6399975
Alignment:
Q  43 aaccaatccgcaatataaga-aaagcacttattaaatatctatcatctaaatcaatactcataaaaattcaatgaaaactttaataaaatgacaannnnn 141  Q
    |||||| || |||||||||  ||| |||| ||||||||| ||||||||| | ||||||||||| |||||||||| |||||||||||||||||||          
T  6400306 aaccaaacctcaatataagctaaaacactaattaaatatatatcatctagaccaatactcatataaattcaatggaaactttaataaaatgaca---tac 6400210  T
Q  142 nnncttctgttgttaagtttcttttttgct------agcaaaaatgtatttatgtgct---acttgaactcttcgataatgattaaaattttagtctttt 232  Q
       ||||  |||||||||||||| ||||||      | |||||||||||||| |||||   |||||||||||| || ||| |||||||||||||||||||    
T  6400209 ttgcttcacttgttaagtttcttctttgctttttctatcaaaaatgtatttaggtgctgctacttgaactcttagagaataattaaaattttagtctttt 6400110  T
Q  233 gtatttcttatcaaataggattactttttgtccatgttttattttggtctatgtagttgagaacattgtcggatgaaaataaaattgtaatgttggataa 332  Q
    ||||||||||  ||||| |||||||||||||||| |||||| ||||||||| ||||||| |||||||||  ||||||||| || |||||||||||||| |    
T  6400109 gtatttcttacaaaataagattactttttgtccacgttttaatttggtctacgtagttg-gaacattgttagatgaaaattaagttgtaatgttggatga 6400011  T
Q  333 aatttaaaacattgcttaaaaatatgttgtgttttag 369  Q
    ||||||||||||| | |||||||||||||||||||||    
T  6400010 aatttaaaacattac-taaaaatatgttgtgttttag 6399975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 38 - 373
Target Start/End: Original strand, 7169680 - 7170017
Alignment:
Q  38 aaccaaaccaatccgcaatataagaaaagcacttattaaatatctatcatctaaatcaatactcataaaaattcaatgaaaactttaataaaatgacaan 137  Q
    |||| |||||| | |||||||||||||| |||| ||||||||| |||||| || | ||||||||||| ||||||||||||||||||||||||||||||      
T  7169680 aaccgaaccaaactgcaatataagaaaaacactaattaaatatatatcatatagaccaatactcatagaaattcaatgaaaactttaataaaatgacata 7169779  T
Q  138 nnnnnnncttctgttgttaagtttcttttttgct--------agcaaaaatgtatttatgtgctacttgaactcttcgataatgattaaaattttagtct 229  Q
            |||| | |||||||||||| ||||||        |  |||||||||||||||||||||||||| ||   || ||||||||||  ||||||||    
T  7169780 tattt---ttctctcgttaagtttcttctttgctttttctataaaaaaaatgtatttatgtgctacttgaagtcgcagagaatgattaaa--tttagtct 7169874  T
Q  230 tttgtatttcttatcaaataggattactttttgtccatgttttattttggtctatgtagttgagaacattgtcggatgaaaataaaattgtaatgttgga 329  Q
    |||||||||||||  ||||| ||||| |||||||||| |||||| ||| |||||   ||||| ||||||||| ||||| |||||||||||||||||||||    
T  7169875 tttgtatttcttacaaaatatgattattttttgtccacgttttaatttagtctaataagttgggaacattgttggatggaaataaaattgtaatgttgga 7169974  T
Q  330 taaaatttaaaacattgcttaaaaatatgttgtgttttagcttt 373  Q
    | |||||||||||||||| |||||||||||||||||||| ||||    
T  7169975 tgaaatttaaaacattgc-taaaaatatgttgtgttttaacttt 7170017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 174 - 369
Target Start/End: Original strand, 24644692 - 24644885
Alignment:
Q  174 caaaaatgtatttatgtgctacttgaactcttcgataatgattaaaattttagtcttttgtatttcttatcaaataggattactttttgtccatgtttta 273  Q
    ||||||||||||||||| ||||||| |||||| || |||||| |||| ||||||| ||||||||| |||  ||||| |||||||||| |||| ||||| |    
T  24644692 caaaaatgtatttatgtactacttgcactcttagagaatgatcaaaaatttagtcatttgtattttttacaaaatatgattactttt-gtccgtgtttaa 24644790  T
Q  274 ttttggtctatgtagttgagaacattgtcggatgaaaataaaattgtaatgttggataaaatttaaaacattgcttaaaaatatgttgtgttttag 369  Q
     ||||||||| ||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||| || |||||||||||||||||||    
T  24644791 atttggtctacgtagttgagaacattgttggatgaaaataaaattgtaatgttggatgaaatttaaaacattg-ttgaaaatatgttgtgttttag 24644885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 38 - 353
Target Start/End: Complemental strand, 22414294 - 22413970
Alignment:
Q  38 aaccaaaccaatccgcaatataagaaaagcacttatt-aaatatctatcatctaaatcaatactcataaaaattcaatgaaaactttaataaaatgacaa 136  Q
    |||| |||||| |||||||||||||||| |||| ||  |||||| ||||||||| | ||||||||| | |||||||||| |||||||||||||||||||     
T  22414294 aaccgaaccaaaccgcaatataagaaaaacactaatccaaatatatatcatctagaccaatactcacataaattcaatggaaactttaataaaatgacat 22414195  T
Q  137 nnnnnnnncttctgttgttaagtttcttttttgct------agcaaaaatgtatttatgtgctacttgaactcttcgataatgattaaaattttagt--- 227  Q
             |||| |||||||||||||| ||||||      | ||||||| ||||||||||||||||||||| || || |||||| ||| || | |        
T  22414194 attttt---ttctcttgttaagtttcttctttgctttatctatcaaaaatctatttatgtgctacttgaacttttagagaatgataaaagttgttgggat 22414098  T
Q  228 --cttttgtatttcttatcaaataggattactttttgtccatgttttattttggtctatgtagttgagaacattgtcggatgaaaataaaattgtaatgt 325  Q
      |||||||||||||||  ||||  |||||||||||||||| |||||| | ||||||||||||||| ||||||||| |||||| ||| ||||||||||||    
T  22414097 tacttttgtatttcttacaaaatgagattactttttgtccacgttttaatctggtctatgtagttgggaacattgttggatgagaatgaaattgtaatgt 22413998  T
Q  326 tggataaaatttaaaacattgcttaaaa 353  Q
    ||||| ||||||||||||||||| ||||    
T  22413997 tggatgaaatttaaaacattgctgaaaa 22413970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 174 - 341
Target Start/End: Original strand, 31945174 - 31945341
Alignment:
Q  174 caaaaatgtatttatgtgctacttgaactcttcgataatgattaaaattttagtcttttgtatttcttatcaaataggattactttttgtccatgtttta 273  Q
    ||||||||||||||||||||| |||||||||| || ||| ||  |||||||||||||||||||||||||  || |  ||||| |||||||||| ||||||    
T  31945174 caaaaatgtatttatgtgctatttgaactcttagagaattatacaaattttagtcttttgtatttcttacaaagtttgattaatttttgtccacgtttta 31945273  T
Q  274 ttttggtctatgtagttgagaacattgtcggatgaaaataaaattgtaatgttggataaaatttaaaa 341  Q
     ||||||||| ||||||||||||||||| | |||||||||||||||||||| ||||| ||| ||||||    
T  31945274 atttggtctacgtagttgagaacattgttgtatgaaaataaaattgtaatgatggatgaaaattaaaa 31945341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 174 - 368
Target Start/End: Complemental strand, 13092342 - 13092148
Alignment:
Q  174 caaaaatgtatttatgtgctacttgaactcttcgataatgattaaaattttagtcttttgtatttcttatcaaataggattactttttgtccatgtttta 273  Q
    ||||||||||||| ||| |||||| ||||||| || |||||| ||  ||||||||||||| || |||||  ||||||||||||||||| |||  |||| |    
T  13092342 caaaaatgtatttttgtactacttaaactcttagagaatgataaattttttagtcttttgcatatcttacaaaataggattactttttctccgcgtttaa 13092243  T
Q  274 ttttggtctatgtagttgagaacattgtcggatgaaaataaaattgtaatgttggataaaatttaaaacattgcttaaaaatat-gttgtgtttta 368  Q
     ||| ||||| || |||| ||||| ||| ||||||||||| |||||||||||| ||| |||||||||||||||| ||||||||| |||||||||||    
T  13092242 attttgtctacgtcgttgggaacactgttggatgaaaatataattgtaatgttcgatgaaatttaaaacattgc-taaaaatatggttgtgtttta 13092148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 210 - 366
Target Start/End: Original strand, 16971516 - 16971671
Alignment:
Q  210 aatgattaaaattttagtcttttgtatttcttatcaaataggattactttttgtccatgttttattttggtctatgtagttgagaacattgtcggatgaa 309  Q
    |||||| |||| |||| |||| | ||||| |||| |||||||||||||||||||||  |||| | ||| ||||| |||||||  ||||| || || ||||    
T  16971516 aatgataaaaaatttattcttctatattttttataaaataggattactttttgtccgcgtttaaattttgtctacgtagttggaaacatcgttgggtgaa 16971615  T
Q  310 aataaaattgtaatgttggataaaatttaaaacattgcttaaaaatatgttgtgttt 366  Q
    |||||||||||| |||||||||||||||||||||||| || ||||||||||||||||    
T  16971616 aataaaattgtattgttggataaaatttaaaacattg-ttgaaaatatgttgtgttt 16971671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 45 - 272
Target Start/End: Complemental strand, 29049022 - 29048794
Alignment:
Q  45 ccaatccgcaatataagaaaagcacttattaaatatctatcatctaaatcaatactcataaaaattcaatgaaaactttaataaaatgacaannnnnnnn 144  Q
    |||| |||||||||| ||||| || | ||||||||| |||||| || | ||||||||||||||| ||||||||||||||||||||||||||             
T  29049022 ccaaaccgcaatataggaaaaacattaattaaatatatatcatttagaccaatactcataaaaactcaatgaaaactttaataaaatgaca-----tttt 29048928  T
Q  145 cttctgttgttaagtttcttttttgc------tagcaaaaatgtatttatgtgctacttgaactcttcgataatgattaaaattttagtcttttgtattt 238  Q
     ||||  ||||||||||||| |||||      |  ||||||||||||||||||||||||||||||||  | |||||| |||   ||||||||||||||||    
T  29048927 tttctcatgttaagtttcttctttgctttttgtttcaaaaatgtatttatgtgctacttgaactctttaagaatgataaaataattagtcttttgtattt 29048828  T
Q  239 cttatcaaataggattactttttgtccatgtttt 272  Q
    ||||  || || ||||||||||||| || |||||    
T  29048827 cttacaaagtaagattactttttgttcacgtttt 29048794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 182 - 373
Target Start/End: Complemental strand, 11417408 - 11417217
Alignment:
Q  182 tatttatgtgctacttgaactcttcgataatgattaaaat-tttagtcttttgtatttcttatcaaataggattactttttgtccatgttttattttggt 280  Q
    ||||| |||| |||||||||||||  | |||||| ||||  |||||||||||||| || |||  ||||   |||||||||| || | |||| | | ||||    
T  11417408 tatttttgtggtacttgaactcttaaagaatgataaaaaaatttagtcttttgtaatttttacaaaatttaattactttttttctacgtttaaatctggt 11417309  T
Q  281 ctatgtagttgagaacattgtcggatgaaaataaaattgtaatgttggataaaatttaaaacattgcttaaaaatatgttgtgttttagcttt 373  Q
     || ||||||| | |||||||  |||||||||||||| |||||||||||| |||||||||||||||| | |||||||||||||||||| ||||    
T  11417308 gtacgtagttgggtacattgttcgatgaaaataaaatcgtaatgttggatgaaatttaaaacattgc-tgaaaatatgttgtgttttatcttt 11417217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 182 - 366
Target Start/End: Original strand, 13532020 - 13532203
Alignment:
Q  182 tatttatgtgctacttgaactcttcgataatgattaaaattttagtcttttgtatttcttatcaaataggattactttttgtccatg-ttttattttggt 280  Q
    ||||||||||||||||||| | ||  | |||||| ||||| ||| ||||||| ||||||||  ||||||||||||  |||||||||| |||||  |||||    
T  13532020 tatttatgtgctacttgaaattttatagaatgat-aaaatcttaatcttttgcatttcttacaaaataggattacgatttgtccatgattttaacttggt 13532118  T
Q  281 ctatgtagttgagaacattgtcggatgaaaataaaattgtaatgttggataaaatttaaaacattgcttaaaaatatgttgtgttt 366  Q
    |||| | ||||  ||||||||   |||||||| |||||||||| || ||| |||||||||||||||| | ||||| ||||||||||    
T  13532119 ctattttgttggaaacattgtaaaatgaaaatgaaattgtaatatttgatgaaatttaaaacattgc-tgaaaatttgttgtgttt 13532203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 174 - 272
Target Start/End: Original strand, 892080 - 892177
Alignment:
Q  174 caaaaatgtatttatgtgctacttgaactcttcgataatgattaaaattttagtcttttgtatttcttatcaaataggattactttttgtccatgtttt 272  Q
    ||||||||||||||||||||||||||||| || || ||||| |||||| ||| |||||| |||||||||   ||||| ||||||||  |||||||||||    
T  892080 caaaaatgtatttatgtgctacttgaacttttagagaatga-taaaatcttaatcttttatatttcttacataatagaattactttgcgtccatgtttt 892177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 287 - 341
Target Start/End: Complemental strand, 8135643 - 8135589
Alignment:
Q  287 agttgagaacattgtcggatgaaaataaaattgtaatgttggataaaatttaaaa 341  Q
    ||||||||||||||| |||||||||||||||||||||||||| | ||||||||||    
T  8135643 agttgagaacattgttggatgaaaataaaattgtaatgttgggtgaaatttaaaa 8135589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 216 - 369
Target Start/End: Complemental strand, 20500865 - 20500712
Alignment:
Q  216 taaaattttagtcttttgtatttcttatcaaataggattactttttgtccatgtttt-attttggtctatgtagttgagaacattgtcggatgaaaataa 314  Q
    |||||| ||| ||||||| ||||||||  |||||   |||| ||||||||||||||| |  ||||||||||| |||   ||||||||   |||||||| |    
T  20500865 taaaatcttaatcttttgcatttcttacaaaataaacttacgttttgtccatgtttttaacttggtctatgttgttagaaacattgtaaaatgaaaatga 20500766  T
Q  315 aattgtaatgttggataaaatttaaaacattgcttaaaaatatgttgtgttttag 369  Q
    ||||||||| || ||| |||||| ||||||||| | |||||||||||||||||||    
T  20500765 aattgtaatatttgatgaaatttgaaacattgc-tgaaaatatgttgtgttttag 20500712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 174 - 272
Target Start/End: Original strand, 19134841 - 19134938
Alignment:
Q  174 caaaaatgtatttatgtgctacttgaactcttcgataatgattaaaattttagtcttttgtatttcttatcaaataggattactttttgtccatgtttt 272  Q
    ||||||||||||||||||||||||||||| || || ||| | |||||| ||||||||||  ||||||||   ||||  ||||||||||||| |||||||    
T  19134841 caaaaatgtatttatgtgctacttgaacttttagagaat-aataaaatcttagtcttttacatttcttacataataccattactttttgtctatgtttt 19134938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 38 - 135
Target Start/End: Original strand, 24644556 - 24644651
Alignment:
Q  38 aaccaaaccaatccgcaatataagaaaagcacttattaaatatctatcatctaaatcaatactcataaaaattcaatgaaaactttaataaaatgaca 135  Q
    |||||||||||  ||||||||||||||| |||| |||| ||||  ||||| |  | ||||||||||| ||  ||||||||||||||||||||||||||    
T  24644556 aaccaaaccaagtcgcaatataagaaaaacactaattatatat--atcatttggaccaatactcatagaacctcaatgaaaactttaataaaatgaca 24644651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 216 - 328
Target Start/End: Complemental strand, 28610923 - 28610808
Alignment:
Q  216 taaaattttagtcttttgtatttcttatcaaataggattactttttg-tccatgtttt-attttggtctatgtagttgagaacattgtcggatgaaaata 313  Q
    |||||| ||||  |||||||||||||||| || || |||  |||||| ||||| |||| | |||||||||||| | || ||||||||| |||||||||||    
T  28610923 taaaatcttagcattttgtatttcttatcgaagagaattgttttttggtccatatttttaatttggtctatgttgatgggaacattgttggatgaaaata 28610824  T
Q  314 aaa-ttgtaatgttgg 328  Q
    ||| ||||||||||||    
T  28610823 aaatttgtaatgttgg 28610808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 36 - 129
Target Start/End: Complemental strand, 8064974 - 8064880
Alignment:
Q  36 caaaccaaaccaatccgcaatataagaaaag-cacttattaaatatctatcatctaaatcaatactcataaaaattcaatgaaaactttaataaa 129  Q
    ||||| ||| ||| |||||| |||||||||  |||| ||||||||| | |||||||  |||||||||||| ||| |||||||||||||| |||||    
T  8064974 caaactaaatcaaaccgcaacataagaaaaaacactaattaaatatatgtcatctatgtcaatactcatagaaactcaatgaaaacttttataaa 8064880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 36 - 134
Target Start/End: Original strand, 13531869 - 13531967
Alignment:
Q  36 caaaccaaaccaatccgcaatataagaaaagcacttattaaatatctatcatctaaatcaatactcataaaaattcaatgaaaactttaataaaatgac 134  Q
    ||||||||||||| |||||| |||||||||    | |||||| || | ||| ||| | ||||||||||| |||||||||| ||||||| ||||||||||    
T  13531869 caaaccaaaccaaaccgcaacataagaaaaatgttaattaaacatatctcacctagaccaatactcatagaaattcaatggaaacttttataaaatgac 13531967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 15101134 - 15101100
Alignment:
Q  1 ttttgtaaggatgagttaggcccccaatttcaaca 35  Q
    |||||||||||||||||||||||||||||||||||    
T  15101134 ttttgtaaggatgagttaggcccccaatttcaaca 15101100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 174 - 264
Target Start/End: Complemental strand, 28633289 - 28633200
Alignment:
Q  174 caaaaatgtatttatgtgctacttgaactcttcgataatgattaaaattttagtcttttgtatttcttatcaaataggattactttttgtc 264  Q
    |||||||||||||||||| ||||| |||| || || ||||| |||||| |||||||||| ||||| |||   ||||| |||||||||||||    
T  28633289 caaaaatgtatttatgtgttacttaaacttttagaaaatga-taaaatcttagtcttttatattttttacataatagaattactttttgtc 28633200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 269 - 346
Target Start/End: Original strand, 12147836 - 12147913
Alignment:
Q  269 ttttattttggtctatgtagttgagaacattgtcggatgaaaataaaattgtaatgttggataaaatttaaaacattg 346  Q
    ||||| |||||||| |||   ||||||||||||  |||||||||||||| ||||| |||||| |||||| ||||||||    
T  12147836 ttttagtttggtctttgtttatgagaacattgttagatgaaaataaaatagtaattttggatcaaatttgaaacattg 12147913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 52 - 129
Target Start/End: Original strand, 31945070 - 31945147
Alignment:
Q  52 gcaatataagaaaagcacttattaaatatctatcatctaaatcaatactcataaaaattcaatgaaaactttaataaa 129  Q
    |||||||||||||| |||| ||||||||| ||||| |||||  |||| ||||| ||| |||| | |||||||||||||    
T  31945070 gcaatataagaaaaacactaattaaatatatatcacctaaactaatattcatagaaagtcaaaggaaactttaataaa 31945147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 306 - 346
Target Start/End: Complemental strand, 4563086 - 4563046
Alignment:
Q  306 tgaaaataaaattgtaatgttggataaaatttaaaacattg 346  Q
    ||||||||||||||||||||||||| ||||| |||||||||    
T  4563086 tgaaaataaaattgtaatgttggatgaaattgaaaacattg 4563046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 4 - 35
Target Start/End: Complemental strand, 18494501 - 18494470
Alignment:
Q  4 tgtaaggatgagttaggcccccaatttcaaca 35  Q
    ||||||||||||||||||||||||||||||||    
T  18494501 tgtaaggatgagttaggcccccaatttcaaca 18494470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 38 - 129
Target Start/End: Original strand, 19134703 - 19134794
Alignment:
Q  38 aaccaaaccaatccgcaatataagaaaagcacttattaaatatctatcatctaaatcaatactcataaaaattcaatgaaaactttaataaa 129  Q
    ||||||||||| |||||| ||||||||| |||| ||||||| | | ||| ||| || |||||||||| ||| | |||| ||||||| |||||    
T  19134703 aaccaaaccaaaccgcaacataagaaaaacactaattaaatctatgtcacctagataaatactcatagaaacttaatggaaacttttataaa 19134794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 30539501 - 30539540
Alignment:
Q  1 ttttgtaaggatgagttaggcccccaatttcaacacaaac 40  Q
    ||||||||||||| |||||||||| |||||||||||||||    
T  30539501 ttttgtaaggatgggttaggccccaaatttcaacacaaac 30539540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 1744865 - 1744831
Alignment:
Q  1 ttttgtaaggatgagttaggcccccaatttcaaca 35  Q
    |||||||||||||||||||||||| ||||||||||    
T  1744865 ttttgtaaggatgagttaggccccaaatttcaaca 1744831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 11313405 - 11313371
Alignment:
Q  1 ttttgtaaggatgagttaggcccccaatttcaaca 35  Q
    |||||||||||||||||||||||| ||||||||||    
T  11313405 ttttgtaaggatgagttaggccccaaatttcaaca 11313371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 11316924 - 11316958
Alignment:
Q  1 ttttgtaaggatgagttaggcccccaatttcaaca 35  Q
    |||||||||| ||||||||||||||||||||||||    
T  11316924 ttttgtaaggttgagttaggcccccaatttcaaca 11316958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 12134506 - 12134472
Alignment:
Q  1 ttttgtaaggatgagttaggcccccaatttcaaca 35  Q
    |||||||||||||||||||||||| ||||||||||    
T  12134506 ttttgtaaggatgagttaggccccaaatttcaaca 12134472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 16876853 - 16876819
Alignment:
Q  1 ttttgtaaggatgagttaggcccccaatttcaaca 35  Q
    |||||||||||||||||||||||| ||||||||||    
T  16876853 ttttgtaaggatgagttaggccccaaatttcaaca 16876819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 16877033 - 16876999
Alignment:
Q  1 ttttgtaaggatgagttaggcccccaatttcaaca 35  Q
    |||||||||||||||||||||||| ||||||||||    
T  16877033 ttttgtaaggatgagttaggccccaaatttcaaca 16876999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 89 - 135
Target Start/End: Original strand, 16971405 - 16971451
Alignment:
Q  89 taaatcaatactcataaaaattcaatgaaaactttaataaaatgaca 135  Q
    |||||||||||||||| |||  ||||| |||||||||||||||||||    
T  16971405 taaatcaatactcatagaaacacaatggaaactttaataaaatgaca 16971451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 19712427 - 19712393
Alignment:
Q  1 ttttgtaaggatgagttaggcccccaatttcaaca 35  Q
    |||||||||||||||||||||||| ||||||||||    
T  19712427 ttttgtaaggatgagttaggccccaaatttcaaca 19712393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 21089186 - 21089152
Alignment:
Q  1 ttttgtaaggatgagttaggcccccaatttcaaca 35  Q
    |||||||||||||||||||||||| ||||||||||    
T  21089186 ttttgtaaggatgagttaggccccaaatttcaaca 21089152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 24055132 - 24055098
Alignment:
Q  1 ttttgtaaggatgagttaggcccccaatttcaaca 35  Q
    |||||||||||||||||||||||| ||||||||||    
T  24055132 ttttgtaaggatgagttaggccccaaatttcaaca 24055098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 24558869 - 24558903
Alignment:
Q  1 ttttgtaaggatgagttaggcccccaatttcaaca 35  Q
    |||||||||||||||||||||||| ||||||||||    
T  24558869 ttttgtaaggatgagttaggccccaaatttcaaca 24558903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 26098423 - 26098457
Alignment:
Q  1 ttttgtaaggatgagttaggcccccaatttcaaca 35  Q
    |||||||||||||||||||||||| ||||||||||    
T  26098423 ttttgtaaggatgagttaggccccaaatttcaaca 26098457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 28149874 - 28149908
Alignment:
Q  1 ttttgtaaggatgagttaggcccccaatttcaaca 35  Q
    |||||||||||||||||||||||| ||||||||||    
T  28149874 ttttgtaaggatgagttaggccccaaatttcaaca 28149908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 30526919 - 30526953
Alignment:
Q  1 ttttgtaaggatgagttaggcccccaatttcaaca 35  Q
    |||||||||| ||||||||||||||||||||||||    
T  30526919 ttttgtaaggttgagttaggcccccaatttcaaca 30526953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 94 - 135
Target Start/End: Complemental strand, 4577519 - 4577478
Alignment:
Q  94 caatactcataaaaattcaatgaaaactttaataaaatgaca 135  Q
    ||||||||||| |||||||||||||||||| |||||| ||||    
T  4577519 caatactcatagaaattcaatgaaaacttttataaaacgaca 4577478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 12124727 - 12124694
Alignment:
Q  1 ttttgtaaggatgagttaggcccccaatttcaac 34  Q
    |||||||||||||||||||||||| |||||||||    
T  12124727 ttttgtaaggatgagttaggccccaaatttcaac 12124694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 306 - 346
Target Start/End: Complemental strand, 4577317 - 4577277
Alignment:
Q  306 tgaaaataaaattgtaatgttggataaaatttaaaacattg 346  Q
    ||||||||||||||| ||||||||| ||||| |||||||||    
T  4577317 tgaaaataaaattgtcatgttggatgaaattgaaaacattg 4577277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 27914349 - 27914313
Alignment:
Q  1 ttttgtaaggatgagttaggcccccaatttcaacaca 37  Q
    |||||||||||||||||||||||| |||||| |||||    
T  27914349 ttttgtaaggatgagttaggccccaaatttctacaca 27914313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 122; Significance: 2e-62; HSPs: 72)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 36 - 353
Target Start/End: Original strand, 55467239 - 55467557
Alignment:
Q  36 caaaccaaaccaatccgcaatataagaaaagcacttattaaatatctatcatctaaatcaatactcataaaaattcaatgaaaactttaataaaatgaca 135  Q
    ||||||||||||| || ||||||||||||| |||| | ||||||| |||||  | || ||||||||||| ||| ||||||||||||||||||||||||||    
T  55467239 caaaccaaaccaaacctcaatataagaaaaacactaactaaatatatatcacttgaaccaatactcatagaaactcaatgaaaactttaataaaatgaca 55467338  T
Q  136 annnnnnnncttctgttgttaagtttctt----ttttgctagcaaaaatgtatttatgtgctacttgaactcttcgataatgattaaaatt-ttagtctt 230  Q
              |||| ||||||||||||||    |||| ||  ||||||||||||||||| |||||||||||||| || |||||| ||||   ||||||||    
T  55467339 tgtttt----ttcttttgttaagtttcttctgttttttctttcaaaaatgtatttatgtactacttgaactcttagagaatgataaaaaaaattagtctt 55467434  T
Q  231 ttgtatttcttatcaaataggattactttttgtccatgttttattttggtctatgtagttgagaacattgtcggatgaaaataaaattgtaatgttggat 330  Q
    ||||||||||||  ||||| |||||||||||||||  |||| | ||||||||| ||||||| ||||||||| |||||||||||||||||| |||||||||    
T  55467435 ttgtatttcttacaaaatatgattactttttgtccgcgtttaaatttggtctacgtagttgcgaacattgttggatgaaaataaaattgttatgttggat 55467534  T
Q  331 aaaatttaaaacattgcttaaaa 353  Q
     ||||||||||||||||| ||||    
T  55467535 gaaatttaaaacattgctgaaaa 55467557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 165 - 373
Target Start/End: Original strand, 2566060 - 2566267
Alignment:
Q  165 ttttgctagcaaaaatgtatttatgtgctacttgaactcttcgataatgattaaaattttagtcttttgtatttcttatcaaataggattactttttgtc 264  Q
    |||| ||| ||||||| |||| |||| |||||||||||||| || ||||||||| ||||||||||||||||||||||   |||||||||||||||||| |    
T  2566060 tttttctatcaaaaatatattaatgttctacttgaactcttagagaatgattaatattttagtcttttgtatttctttcaaaataggattactttttgcc 2566159  T
Q  265 catgttttattttggtctatgtagttgagaacattgtcggatgaaaataaaattgtaatgttggataaaatttaaaacattgcttaaaaatatgttgtgt 364  Q
    ||||||||| |||||||||  |||||  ||||||||| |||||||||||||||||||||||| ||| |||||||||||| || || ||||||||||||||    
T  2566160 catgttttaatttggtctacatagtttggaacattgttggatgaaaataaaattgtaatgttagatgaaatttaaaaca-tggttgaaaatatgttgtgt 2566258  T
Q  365 tttagcttt 373  Q
    |||||||||    
T  2566259 tttagcttt 2566267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 36 - 373
Target Start/End: Original strand, 25918850 - 25919187
Alignment:
Q  36 caaaccaaaccaatccgcaatataagaaaagcacttattaaatatctatcatctaaatcaatactcataaaaattcaatgaaaactttaataaaatgaca 135  Q
    |||||||||||||  ||||||||||||||| |||  ||||||||| || || ||  | ||||||| ||| ||| |||||| |||||||||||||||||||    
T  25918850 caaaccaaaccaaaacgcaatataagaaaaacacggattaaatatataccacctcgaccaatacttatagaaactcaatggaaactttaataaaatgaca 25918949  T
Q  136 annnnnnnncttctgttgttaagtttcttttttgctag------caaaaatgtatttatgtgctacttgaactcttcgataatgattaaaattttagtct 229  Q
    |         || | ||||||||||| || |||| |        |||||||||||||||||||||||||||||||| || |||||| |||||||||||||    
T  25918950 aattt-----ttatcttgttaagttttttctttgttttttgtttcaaaaatgtatttatgtgctacttgaactcttagagaatgataaaaattttagtct 25919044  T
Q  230 tttgtatttcttatcaaataggattactttttgtccatgttttattttggtctatgtagttgagaacattgtcggatgaaaataaaattgtaatgttgga 329  Q
    ||||||||| |||  || |  ||||||||||||||||  ||||| ||||||||  ||||||||||||||||| ||||||||||||||||| ||||||||     
T  25919045 tttgtatttattacaaagtttgattactttttgtccacattttaatttggtctgcgtagttgagaacattgttggatgaaaataaaattgaaatgttggg 25919144  T
Q  330 taaaatttaaaacattgcttaaaaatatgttgtgttttagcttt 373  Q
    | ||||||||||||||   | |||||||||||||||||||||||    
T  25919145 tgaaatttaaaacatt-agtgaaaatatgttgtgttttagcttt 25919187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 36 - 336
Target Start/End: Original strand, 22255894 - 22256197
Alignment:
Q  36 caaaccaaaccaatccgcaatataagaaaagcacttattaaatatctatcatctaaatcaatactcataaaaattcaatgaaaactttaataaaatgaca 135  Q
    ||||||||||||| |||| ||||||||||| |||| ||||||||| |||||  || | ||||||||||| |||||||||| ||||||||||||||||  |    
T  22255894 caaaccaaaccaaaccgcgatataagaaaaacactaattaaatatatatcacgtagaccaatactcatataaattcaatggaaactttaataaaatgtta 22255993  T
Q  136 annnnnnnncttctgttgttaagtttctt-------ttttgctagcaaaaatgtatttatgtgctacttgaactcttcgataatgattaaaattttagtc 228  Q
              |||| ||||||||||||||       |||| ||| ||||||||||||||| |||||||||||||||| || |||||||||| ||||||||    
T  22255994 tatttt----ttctcttgttaagtttcttcgttgttttttcctatcaaaaatgtatttatatgctacttgaactcttagagaatgattaaatttttagtc 22256089  T
Q  229 ttttgtatttcttatcaaataggattactttttgtccatgttttattttggtctatgtagttgagaacattgtcggatgaaaataaaattgtaatgttgg 328  Q
    ||||||||||||||  | |||| ||| ||||||| ||| |||||| ||||||||| || |||  | ||||||  ||||||||||||||||||||||||||    
T  22256090 ttttgtatttcttacaagatagaatttctttttgcccacgttttaatttggtctacgttgttagggacattgctggatgaaaataaaattgtaatgttgg 22256189  T
Q  329 ataaaatt 336  Q
    || |||||    
T  22256190 atgaaatt 22256197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 36 - 373
Target Start/End: Complemental strand, 26758715 - 26758376
Alignment:
Q  36 caaaccaaaccaatccgcaatataagaaaagcacttattaaatatctatcatctaaatcaatactcataaaaattcaatgaaaactttaataaaatgaca 135  Q
    ||||||||||||| |||||||||||||||| |||| || |||||| |||||  | || |||||| |||| ||| ||||||||||||||||| ||||||||    
T  26758715 caaaccaaaccaaaccgcaatataagaaaaacactaataaaatatatatcacttgaaccaatacccatagaaactcaatgaaaactttaatcaaatgaca 26758616  T
Q  136 annnnnnnncttctgttgttaagtttcttttttgctagc-------aaaaatgtatttatgtgctacttgaactcttcgataatgattaaaattttagtc 228  Q
              |||| |||||||||||||| ||| ||          ||||||||||| |||| ||||||||||||||  | |||||| | ||||||||||    
T  26758615 tatttt----ttctcttgttaagtttcttatttactttttctttaaaaaaatgtattaatgtactacttgaactcttacagaatgataacaattttagtc 26758520  T
Q  229 ttttgtatttcttatcaaataggattactttttgtccatgttttattttggtctatgtagttgagaacattgtcggatgaaaataaaattgtaatgttgg 328  Q
    |||||||||| ||| |||||| ||||||||||| |||  |||| | ||| |||||  |||||| ||||||||| ||||||||||||||||||||| |||     
T  26758519 ttttgtatttattaccaaatatgattactttttatccgcgtttaaatttagtctacatagttgggaacattgttggatgaaaataaaattgtaattttga 26758420  T
Q  329 ataaaatttaaaacattgcttaaaaatatgttgtgttttagcttt 373  Q
     | |||||||||||||||| | |||||||||||||||||||||||    
T  26758419 gtgaaatttaaaacattgc-tgaaaatatgttgtgttttagcttt 26758376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 175 - 373
Target Start/End: Complemental strand, 54122667 - 54122468
Alignment:
Q  175 aaaaatgtatttatgtgctacttgaactcttcgataatgattaaaattttagtcttttgtatttcttatcaaataggattactttttgtccatgttttat 274  Q
    ||||||||||||||||||||||||||||||| || |||||| |||| |||||||||||||||||||||     | ||||||||||||||||| ||||||     
T  54122667 aaaaatgtatttatgtgctacttgaactcttagagaatgataaaaaatttagtcttttgtatttcttactgggttggattactttttgtccaagttttaa 54122568  T
Q  275 tttggtctatgtagttgagaacattgtcggatgaaaataaaa--ttgtaatgttggataaaatttaaaacattgcttaaaaatatgttgtgttttagctt 372  Q
    |||||| || ||||||||||||||||| ||||||||||||||  ||||||| || ||| ||||||||||||||  ||||||||||||| || |||| |||    
T  54122567 tttggtatacgtagttgagaacattgttggatgaaaataaaattttgtaatatttgatgaaatttaaaacatt-attaaaaatatgttatggtttaactt 54122469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 146 - 373
Target Start/End: Complemental strand, 27054458 - 27054226
Alignment:
Q  146 ttctgttgttaagtttcttttttg------ctagcaaaaatgtatttatgtgctacttgaactcttcgataatgattaaaattttagtcttttgtatttc 239  Q
    ||||||||||||||||||| ||||      ||| |||||||||||||||||||||||||||||||| |  |||||||||| ||||| |||||||||||||    
T  27054458 ttctgttgttaagtttcttctttgttttttctatcaaaaatgtatttatgtgctacttgaactcttagtgaatgattaaa-ttttactcttttgtatttc 27054360  T
Q  240 ttatcaaataggattactttttgtccatgttttattttggtctatgtagttgagaacattgtcggatg-aaaataaaattgtaatgttggataaaattta 338  Q
    |||  ||||| ||||||||||||||||| ||||| |||||| ||| |||||| ||| ||||| ||||| |||||||||||| |||  ||||| | |||||    
T  27054359 ttacaaaatatgattactttttgtccatattttaatttggtttatatagttgggaatattgttggatgcaaaataaaattgcaattatggatgagattta 27054260  T
Q  339 aaacattgcttaaaaatatgttgtgttttagcttt 373  Q
    ||| |||||   |||||||||||||||||| ||||    
T  27054259 aaaaattgc-agaaaatatgttgtgttttaacttt 27054226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 43 - 373
Target Start/End: Complemental strand, 45629671 - 45629341
Alignment:
Q  43 aaccaatccgcaatataagaaaagcacttattaaatatctatcatctaaatcaatactcataaaaattcaatgaaaactttaataaaatgacaannnnnn 142  Q
    |||||| || ||||||||||||| |||| ||||||||| |||||  |  | ||||||||||| || ||||| | |||||||||||||||||||           
T  45629671 aaccaaaccacaatataagaaaaacactaattaaatatatatcacttggaccaatactcatagaatttcaacggaaactttaataaaatgacatatttt- 45629573  T
Q  143 nncttctgttgttaagtttcttttttg------ctagcaaaaatgtatttatgtgctacttgaactcttcgataatgattaaaattttagtcttttgtat 236  Q
       || | |||||||||||||| ||||      ||  ||||||| ||||||||| ||||||||| | ||  | |||||| || |||||||||||||||||    
T  45629572 ---ttattttgttaagtttcttctttgttttttctttcaaaaatctatttatgtactacttgaatttttaaagaatgataaatattttagtcttttgtat 45629476  T
Q  237 ttcttatcaaataggattactttttgtccatgttttattttggtctatgtagttgagaacattgtcggatgaaaataaaattgtaatgttggataaaatt 336  Q
    |||||| |||| |||||| |||||||||| | ||| | |||| ||||  ||||||| |||||||| ||||||||||||||||||||||||| || |||||    
T  45629475 ttctta-caaaaaggattgctttttgtccgtatttaagtttgatctacatagttgaaaacattgttggatgaaaataaaattgtaatgttgtatgaaatt 45629377  T
Q  337 taaaacattgcttaaaaatatgttgtgttttagcttt 373  Q
    ||||| ||||| | |||||||||| ||||||| ||||    
T  45629376 taaaatattgc-tgaaaatatgttatgttttaccttt 45629341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 215 - 373
Target Start/End: Original strand, 38651764 - 38651924
Alignment:
Q  215 ttaaaattttagtcttttgtatttcttatcaaataggattactttttgtccatgtt-ttattttggtctatgtagttgagaacattgtcggatgaaaata 313  Q
    ||||||| ||||||||||||||||||||  |||||||||||| ||||||||||||| |||  ||||||||||| ||||  ||||||||   || ||||||    
T  38651764 ttaaaatcttagtcttttgtatttcttagaaaataggattacattttgtccatgttgttaacttggtctatgttgttggaaacattgtaaaataaaaata 38651863  T
Q  314 aaattgtaatgttggataaaatttaaaacattgct-taaaaatatgttgtgttttagcttt 373  Q
    |||||||||| || ||| |||||||||||||||||  ||||||||||||||||||| ||||    
T  38651864 aaattgtaatatttgatgaaatttaaaacattgctagaaaaatatgttgtgttttaacttt 38651924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 43 - 361
Target Start/End: Original strand, 45914805 - 45915129
Alignment:
Q  43 aaccaatccgcaatataagaaaagcacttattaaatatctatcatctaaatcaatactcataaaaattcaatgaaaactttaataaaatgacaannnnnn 142  Q
    |||||| ||||||||||||||||  ||| ||||||||| |||||| |  | ||||||||| | |   ||||||||||||||||||||||||||           
T  45914805 aaccaaaccgcaatataagaaaaatactaattaaatatatatcatttggaccaatactcaaagaggctcaatgaaaactttaataaaatgacatattttt 45914904  T
Q  143 nncttctgttgttaagtttcttttttg------ctagcaaaaatgtatttatgtgctacttgaactcttcgataatgattaaaatt---ttagtcttttg 233  Q
       |||| |||||||||||||| ||||      ||   |||||||||||||||| |||||| |||||||  | |||||| ||||     ||||||||||     
T  45914905 t--ttctcttgttaagtttcttgtttgttttttcttttaaaaatgtatttatgtactacttaaactcttaaagaatgataaaaaaaaaattagtcttttt 45915002  T
Q  234 tatttcttatcaaataggattactttttgtccatgttttattttggtctatgtagttgagaacattgtcggatgaaaataaaattgtaatgttggataaa 333  Q
    |||||||||  ||||| ||||||||||| |    |||| | ||||||||| ||||||||||||| |||  ||||||||||||||||||||||||||| ||    
T  45915003 tatttcttaaaaaatatgattactttttattttcgtttaaatttggtctacgtagttgagaacactgtttgatgaaaataaaattgtaatgttggatgaa 45915102  T
Q  334 atttaaaacattgcttaaaaatatgttg 361  Q
    ||||||||||||| || |||||||||||    
T  45915103 atttaaaacattg-ttgaaaatatgttg 45915129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 174 - 369
Target Start/End: Complemental strand, 4280633 - 4280436
Alignment:
Q  174 caaaaatgtatttatgtgctacttgaactcttcgataatgattaaaattttagtcttttgtatttcttatcaaataggattactttttgtccatgtttta 273  Q
    |||||||||| ||| ||| |||||| ||| || || |||||| ||||| ||||||| ||| |||| |||  ||||| ||||| |||||||||||||||||    
T  4280633 caaaaatgtacttacgtgttacttgcacttttagaaaatgat-aaaatcttagtctgttgcatttattacaaaatatgattattttttgtccatgtttta 4280535  T
Q  274 t-tttggtctatgtagttgagaaca---ttgtcggatgaaaataaaattgtaatgttggataaaatttaaaacattgcttaaaaatatgttgtgttttag 369  Q
      |||||||||||||||||  ||||   |||||  |||| ||| ||||||||||||||||| |||||||||||||||| | ||||||||| |||||||||    
T  4280534 aatttggtctatgtagttggaaacaatattgtccaatgataatgaaattgtaatgttggatgaaatttaaaacattgc-tgaaaatatgtagtgttttag 4280436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 175 - 373
Target Start/End: Complemental strand, 37045655 - 37045461
Alignment:
Q  175 aaaaatgtatttatgtgctacttgaactcttcgataatgattaaaattttagtcttttgtatttcttatcaaataggattactttttgtccatgtttt-a 273  Q
    ||||||||||||||||||||||| |||| || || |||||  || || | ||||||||| ||||||||  ||||| |||||||||||||||  ||||| |    
T  37045655 aaaaatgtatttatgtgctactt-aacttttagagaatgag-aacatctcagtcttttgcatttcttacaaaataagattactttttgtccgcgttttta 37045558  T
Q  274 ttttggtctatgtagttgagaacattgtcggatgaaaataaaattgtaatgttggataaaatttaaaacattgcttaaaaatatgttgtgttttagcttt 373  Q
     |||||| ||||| ||||  ||||||||   |||||||| ||||||||||||| ||| ||||||||||||||| || ||||||| |||||||| ||||||    
T  37045557 atttggtttatgttgttggaaacattgta--atgaaaatgaaattgtaatgtttgatgaaatttaaaacattg-ttgaaaatatattgtgtttcagcttt 37045461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 174 - 361
Target Start/End: Original strand, 42362954 - 42363140
Alignment:
Q  174 caaaaatgtatttatgtgctacttgaactcttcgataatgattaaaattttagtcttttgtatttcttatcaaataggattactttttgtccatg-tttt 272  Q
    |||||| ||||||||||||| |||| ||| || || |||||| ||||| ||||| ||||| ||||||||  ||||| |||||||||||||||| | ||||    
T  42362954 caaaaacgtatttatgtgctgcttgtacttttagagaatgat-aaaatcttagtattttgcatttcttacaaaatatgattactttttgtccacgttttt 42363052  T
Q  273 attttggtctatgtagttgagaacattgtcggatgaaaataaaattgtaatgttggataaaatttaaaacattgcttaaaaatatgttg 361  Q
    |  ||||||||||| ||||  | ||||||   |||||||| ||||||||||||| ||| ||||| ||||||||||  ||||||||||||    
T  42363053 aacttggtctatgtcgttggaatcattgtaaaatgaaaattaaattgtaatgtttgatgaaattgaaaacattgc-gaaaaatatgttg 42363140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 36 - 135
Target Start/End: Complemental strand, 8355814 - 8355716
Alignment:
Q  36 caaaccaaaccaatccgcaatataagaaaagcacttattaaatatctatcatctaaatcaatactcataaaaattcaatgaaaactttaataaaatgaca 135  Q
    ||||||||||||| |||||||||||| ||| |||| |||||||||  |||||||| | ||||||||||| ||||| ||||||||||||||||||||||||    
T  8355814 caaaccaaaccaaaccgcaatataagtaaa-cactaattaaatatacatcatctagaccaatactcatagaaatttaatgaaaactttaataaaatgaca 8355716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 175 - 366
Target Start/End: Complemental strand, 44651307 - 44651118
Alignment:
Q  175 aaaaatgtatttatgtgctacttgaactcttcgataatgattaaaattttagtcttttgtatttcttatcaaataggattactttttgtccatgttttat 274  Q
    ||||| |||||||||||||||||||| | || || |||||  ||||| ||||||||||| ||||||||  ||||| |||||| |||||||||| ||||      
T  44651307 aaaaacgtatttatgtgctacttgaaattttagagaatgaa-aaaatcttagtcttttgcatttcttacaaaataagattacgttttgtccatattttta 44651209  T
Q  275 tttggtctatgtagttgagaacattgtcggatgaaaataaaattgtaatgttggataaaatttaaaacattgcttaaaaatatgttgtgttt 366  Q
     ||||| ||||| ||||| ||||||||   | |||||| |||| ||||| || ||| |||||||||||||||| | |||||||| |||||||    
T  44651208 cttggtatatgttgttgaaaacattgtaaaacgaaaatgaaatcgtaatatttgatgaaatttaaaacattgc-tgaaaatatgctgtgttt 44651118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 175 - 353
Target Start/End: Original strand, 46253188 - 46253362
Alignment:
Q  175 aaaaatgtatttatgtgctacttgaactcttcgataatgattaaaattttagtcttttgtatttcttatcaaataggattactttttgtccatgttttat 274  Q
    ||||||||||||||||  ||||||||||||| || |||||| |||| ||||| |||    ||||||||| ||||||||||| | ||| || |||||| |     
T  46253188 aaaaatgtatttatgtagtacttgaactcttagagaatgataaaaaatttagcctt----atttcttataaaataggattaatatttttctatgtttaaa 46253283  T
Q  275 tttggtctatgtagttgagaacattgtcggatgaaaataaaattgtaatgttggataaaatttaaaacattgcttaaaa 353  Q
     | | ||||| ||||||  |||| ||| |||||||||||||||| ||| |||  |||||||||||||||||||| ||||    
T  46253284 ctcgctctatttagttggaaacaatgttggatgaaaataaaattataacgttttataaaatttaaaacattgctgaaaa 46253362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 269 - 346
Target Start/End: Complemental strand, 55129990 - 55129913
Alignment:
Q  269 ttttattttggtctatgtagttgagaacattgtcggatgaaaataaaattgtaatgttggataaaatttaaaacattg 346  Q
    ||||| |||| |||||||||||| ||||||||| |||| |||||||||||||||||||||||||| ||||||||||||    
T  55129990 ttttaatttgatctatgtagttgcgaacattgttggataaaaataaaattgtaatgttggataaattttaaaacattg 55129913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 174 - 343
Target Start/End: Complemental strand, 4669077 - 4668908
Alignment:
Q  174 caaaaatgtatttatgtgctacttgaactcttcgataatgattaaaattttagtcttttgtatttcttatcaaataggattactttttgtccatgtttt- 272  Q
    ||||||||||||||||||||||||||||| || || ||||| |||||| ||||| ||||  |||||| |   |||| |||||||||||| ||| |||||     
T  4669077 caaaaatgtatttatgtgctacttgaacttttagagaatga-taaaatattagtattttacatttctaacgtaataagattactttttgcccacgtttta 4668979  T
Q  273 attttggtctatgtagttgagaacattgtcggatgaaaataaaattgtaatgttggataaaatttaaaaca 343  Q
    |  ||||| ||||| ||||  ||||||||   || ||||| ||||||||||||||||||||||| ||||||    
T  4668978 aaattggtttatgtcgttggaaacattgttaaataaaaatgaaattgtaatgttggataaaattgaaaaca 4668908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 181 - 366
Target Start/End: Original strand, 5640471 - 5640653
Alignment:
Q  181 gtatttatgtgctacttgaactcttcgataatgattaaaattttagtcttttgtatttcttatcaaataggattactttttgtccatgtt-ttattttgg 279  Q
    ||||||| |||||||||||| | || || |||||| ||||| ||||||||||| ||||||||  |||||||||||| ||||||||||||| |||  ||||    
T  5640471 gtatttacgtgctacttgaaattttagagaatgat-aaaatcttagtcttttgcatttcttacaaaataggattacattttgtccatgttattaacttgg 5640569  T
Q  280 tctatgtagttgagaacattgtcggatgaaaataaaattgtaatgttggataaaatttaaaacattgcttaaaaatatgttgtgttt 366  Q
    | ||| | |||| |||||||||   ||| |||| |||||||||| || ||| ||||||||||||||| || |||||||| |||||||    
T  5640570 tatatattgttg-gaacattgtaaaatg-aaatgaaattgtaatatttgatgaaatttaaaacattg-ttgaaaatatggtgtgttt 5640653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 215 - 373
Target Start/End: Complemental strand, 4555001 - 4554842
Alignment:
Q  215 ttaaaattttagtcttttgtatttcttatcaaataggattac-tttttgtccatgtttt-attttggtctatgtagttgagaacattgtcggatgaaaat 312  Q
    ||||||| ||||||||||| ||||||||  ||||| |||||| ||||| |||||||||| |  |||||||||||  |||  || |||||   ||||||||    
T  4555001 ttaaaatcttagtcttttgcatttcttagaaaataagattacgtttttttccatgtttttaacttggtctatgtctttggaaatattgtaaaatgaaaat 4554902  T
Q  313 aaaattgtaatgttggataaaatttaaaacattgcttaaaaatatgttgtgttttagcttt 373  Q
    ||| ||||||| || ||| |||| |||||||||||| ||||||||||||||||||| ||||    
T  4554901 aaa-ttgtaatatttgatgaaatgtaaaacattgctgaaaaatatgttgtgttttaacttt 4554842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 218 - 373
Target Start/End: Original strand, 8557729 - 8557884
Alignment:
Q  218 aaattttagtcttttgtatttcttatcaaataggattactttttgtccatgtttt-attttggtctatgtagttgagaacattgtcggatgaaaataaaa 316  Q
    |||| ||||||||||| ||||||||  |||||||||||  |||||| |||||||| |  ||||| ||||| ||||  ||||||||   |||||||| |||    
T  8557729 aaatcttagtcttttgcatttcttactaaataggattatgttttgtgcatgtttttaacttggtttatgtggttggaaacattgtaaaatgaaaatgaaa 8557828  T
Q  317 ttgtaatgttggataaaatttaaaacattgcttaaaaatatgttgtgttttagcttt 373  Q
    ||||||| || ||| ||||||||||||||||   |||||||||||||||| ||||||    
T  8557829 ttgtaatatttgatgaaatttaaaacattgc-agaaaatatgttgtgtttaagcttt 8557884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 185 - 366
Target Start/End: Original strand, 50578746 - 50578926
Alignment:
Q  185 ttatgtgctacttgaactcttcgataatgattaaaattttagtcttttgtatttcttatcaaataggattactttttgtccatgttttattttg--gtct 282  Q
    |||||||| ||||||| | || || |||||| ||||| ||||||||||| ||||||||  |||||||||||| ||||||||||||||| || ||  ||||    
T  50578746 ttatgtgccacttgaaattttagagaatgat-aaaatcttagtcttttgcatttcttacaaaataggattacgttttgtccatgtttt-ttatgcagtct 50578843  T
Q  283 atgtagttgagaacattgtcggatgaaaataaaattgtaatgttggataaaatttaaaacattgcttaaaaatatgttgtgttt 366  Q
    || | || || ||||||||   |||||||  |||||||||| || ||| |||||||||||||||| | |||||| |||||||||    
T  50578844 atattgtcgaaaacattgtaaaatgaaaacgaaattgtaatatttgatgaaatttaaaacattgc-tgaaaataagttgtgttt 50578926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 254 - 369
Target Start/End: Complemental strand, 48167533 - 48167420
Alignment:
Q  254 tactttttgtccatgttttattttggtctatgtagttgagaacattgtcggatgaaaataaaattgtaatgttggataaaatttaaaacattgcttaaaa 353  Q
    ||||||||||||  |||| | ||||||||| ||| |||  |||||||| | ||||| |||||||||||||||||||| ||||||| || |||| ||||||    
T  48167533 tactttttgtccgcgtttaaatttggtctacgtaattggtaacattgttgaatgaacataaaattgtaatgttggatgaaatttataa-attg-ttaaaa 48167436  T
Q  354 atatgttgtgttttag 369  Q
    ||||||||||||||||    
T  48167435 atatgttgtgttttag 48167420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 174 - 369
Target Start/End: Complemental strand, 21562898 - 21562707
Alignment:
Q  174 caaaaatgtatttatgtgctacttgaactcttcgataatgattaaaattttagtcttttgtatttcttatcaaataggattactttttgtccatgtttta 273  Q
    ||||||||||||||||| |||||||||||  |  | |||||| ||||| ||| || |||| |||||| || ||||| ||||||||||||||||  ||||     
T  21562898 caaaaatgtatttatgtactacttgaact--taaagaatgat-aaaatcttattcatttgcatttctaataaaatatgattactttttgtccacattttt 21562802  T
Q  274 t-tttggtctatgtagttgagaacattgtcggatgaaaataaaattgtaatgttggataaaatttaaaacattgcttaaaaatatgttgtgttttag 369  Q
    | |||||||||||||||||| |||||||| || ||| ||| ||||||| |  ||||||  ||||||||| ||||    |||||||||||||||||||    
T  21562801 tatttggtctatgtagttgaaaacattgttgggtgataattaaattgtgacattggat-gaatttaaaagattg-gcgaaaatatgttgtgttttag 21562707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 174 - 346
Target Start/End: Original strand, 22472801 - 22472975
Alignment:
Q  174 caaaaatgtatttatgtgctacttgaactcttcgataatgattaaaattttagtcttttgtatttcttatcaaataggattactttttgtc--catgttt 271  Q
    ||||||||||||||||| ||||||||||| || || ||||| |||||| ||||| ||||| ||||||||   |||| |||||||||||| |  ||  |||    
T  22472801 caaaaatgtatttatgttctacttgaacttttagaaaatga-taaaatcttagtattttgcatttcttacataatatgattactttttgcccacacattt 22472899  T
Q  272 ta-ttttggtctatgtagttgagaacattgtcggatgaaaataaaattgtaatgttggataaaatttaaaacattg 346  Q
    || |||| || || || ||   |||||||||  ||||||| |||||||||||||||||   |||||||||||||||    
T  22472900 tattttttgtttacgttgtcaggaacattgttagatgaaagtaaaattgtaatgttggtcgaaatttaaaacattg 22472975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 306 - 370
Target Start/End: Complemental strand, 25466019 - 25465956
Alignment:
Q  306 tgaaaataaaattgtaatgttggataaaatttaaaacattgcttaaaaatatgttgtgttttagc 370  Q
    ||||||| ||||||||||||| ||| ||||||||||||||| || ||||||||||||||||||||    
T  25466019 tgaaaatgaaattgtaatgtttgatgaaatttaaaacattg-ttgaaaatatgttgtgttttagc 25465956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 36 - 240
Target Start/End: Complemental strand, 48169158 - 48168951
Alignment:
Q  36 caaaccaaaccaatccgcaatataagaaaagcacttattaaatatctatcatctaaatcaatactcataaaaattcaatgaaaactttaataaaatgaca 135  Q
    ||||||||||||| | ||||||||||||||  ||| || |||||| |||||  || | ||||||||| | ||| | ||||||||||||||||||||||||    
T  48169158 caaaccaaaccaaacagcaatataagaaaaatactaataaaatatatatcacttagaccaatactcaaagaaacttaatgaaaactttaataaaatgaca 48169059  T
Q  136 annnnnnnncttctgttgttaagtttcttttttgcta------gcaaaaatgtatttatgtgctacttgaactcttcgataatgat-taaaattttagtc 228  Q
              ||||  || |||||||||| |||||||       ||||||||||||||||| |||||||||||||| || ||||||  |||| | |||||    
T  48169058 ----tattttttcttctgctaagtttcttctttgctatttctttcaaaaatgtatttatgtactacttgaactcttagagaatgataaaaaaatgtagtc 48168963  T
Q  229 ttttgtatttct 240  Q
    ||||||||||||    
T  48168962 ttttgtatttct 48168951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 36 - 135
Target Start/End: Original strand, 46253042 - 46253147
Alignment:
Q  36 caaaccaaaccaatccgcaatataagaaaagcacttattaaatatctat------catctaaatcaatactcataaaaattcaatgaaaactttaataaa 129  Q
    ||||||||||||| |||||||||||||||| |||| ||||||||| |||      ||  |  | ||||||||||| ||| ||||||||||||||||||||    
T  46253042 caaaccaaaccaaaccgcaatataagaaaaacactaattaaatatatatatatatcacttggaccaatactcatagaaactcaatgaaaactttaataaa 46253141  T
Q  130 atgaca 135  Q
    ||||||    
T  46253142 atgaca 46253147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 50 - 135
Target Start/End: Complemental strand, 38681687 - 38681602
Alignment:
Q  50 ccgcaatataagaaaagcacttattaaatatctatcatctaaatcaatactcataaaaattcaatgaaaactttaataaaatgaca 135  Q
    |||||| ||||||||| |||| ||||||| | |  |||||| |  ||||||| ||||||||||||||||||||| |||||||||||    
T  38681687 ccgcaacataagaaaaacactaattaaatctatgccatctagactaatactcgtaaaaattcaatgaaaacttttataaaatgaca 38681602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 174 - 343
Target Start/End: Original strand, 10481354 - 10481526
Alignment:
Q  174 caaaaatgtatttatgtgctacttgaactcttcgataatgattaaaattttagtcttttgta---tttcttatcaaataggattactttttgtccatgtt 270  Q
    |||||||||||||||||||||||| |||| || || |||||| ||||| |||||  | | ||   |||||||   |||||||| ||||| || |||  ||    
T  10481354 caaaaatgtatttatgtgctactttaacttttagaaaatgat-aaaatcttagtaatatttaacatttcttacggaataggataactttatgcccacctt 10481452  T
Q  271 tt-attttggtctatgtagttgagaacattgtcggatgaaaataaaattgtaatgttggataaaatttaaaaca 343  Q
    || | |||||| ||||| |||   ||||||||  ||||||||| |||||||||||||||||| |||||||||||    
T  10481453 tttaatttggtttatgttgttagaaacattgttagatgaaaatgaaattgtaatgttggatagaatttaaaaca 10481526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 303 - 346
Target Start/End: Complemental strand, 20038604 - 20038561
Alignment:
Q  303 ggatgaaaataaaattgtaatgttggataaaatttaaaacattg 346  Q
    |||||||||||||||||||||||||||| |||||| ||||||||    
T  20038604 ggatgaaaataaaattgtaatgttggatcaaatttgaaacattg 20038561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 216 - 337
Target Start/End: Complemental strand, 21238342 - 21238219
Alignment:
Q  216 taaaattttagtcttttgtatttcttatcaaataggattactttttg-tccatgtttt-attttggtctatgtagttgagaacattgtcggatgaaaata 313  Q
    ||||||||||||| |||| |||||||| |||| || |||  |||||| |||||||||| | |||||| ||||| | ||  |||||||  |||||||| ||    
T  21238342 taaaattttagtcatttgcatttcttaccaaagagaattgttttttgatccatgtttttaatttggtatatgttgatggaaacattgatggatgaaacta 21238243  T
Q  314 aaattgtaatgttggataaaattt 337  Q
    ||||||||||||| ||| ||||||    
T  21238242 aaattgtaatgttagatcaaattt 21238219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 22339822 - 22339857
Alignment:
Q  1 ttttgtaaggatgagttaggcccccaatttcaacac 36  Q
    ||||||||||||||||||||||||||||||||||||    
T  22339822 ttttgtaaggatgagttaggcccccaatttcaacac 22339857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 26366812 - 26366847
Alignment:
Q  1 ttttgtaaggatgagttaggcccccaatttcaacac 36  Q
    ||||||||||||||||||||||||||||||||||||    
T  26366812 ttttgtaaggatgagttaggcccccaatttcaacac 26366847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 174 - 272
Target Start/End: Original strand, 2832122 - 2832219
Alignment:
Q  174 caaaaatgtatttatgtgctacttgaactcttcgataatgattaaaattttagtcttttgtatttcttatcaaataggattactttttgtccatgtttt 272  Q
    ||||||| ||||||||||||||||||||| ||||| ||||| |||||| ||  |||||| ||||| ||||  ||| | |||||||| |||||| |||||    
T  2832122 caaaaatatatttatgtgctacttgaacttttcgagaatga-taaaatattgatcttttatatttattatgtaattgaattactttgtgtccaagtttt 2832219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 175 - 215
Target Start/End: Complemental strand, 8355673 - 8355633
Alignment:
Q  175 aaaaatgtatttatgtgctacttgaactcttcgataatgat 215  Q
    ||||||||||||||||||||||||||||||| || ||||||    
T  8355673 aaaaatgtatttatgtgctacttgaactcttagagaatgat 8355633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 175 - 310
Target Start/End: Original strand, 17144471 - 17144606
Alignment:
Q  175 aaaaatgtatttatgtgctacttgaactcttcgataatgattaaaattttagtcttttgtatttcttatcaaataggattactttttgtccatg-tttta 273  Q
    |||||||||||||| ||||| ||||||| ||  ||| | || ||||| ||||||||||| ||||||||| ||||||  ||  |||||||||| | ||||     
T  17144471 aaaaatgtatttatatgctatttgaacttttaaatatttat-aaaatcttagtcttttgcatttcttataaaatagatttcatttttgtccacgtttttc 17144569  T
Q  274 ttttggtctatgtagttgagaacattgtcggatgaaa 310  Q
     |||| ||||||||||||  |||||||| | ||||||    
T  17144570 atttgctctatgtagttggaaacattgttgaatgaaa 17144606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 279 - 346
Target Start/End: Complemental strand, 25858434 - 25858366
Alignment:
Q  279 gtctatgtagtt-gagaacattgtcggatgaaaataaaattgtaatgttggataaaatttaaaacattg 346  Q
    |||||||| ||| ||||||||||| | |||||||| ||||||||||||||||  |||||| ||||||||    
T  25858434 gtctatgttgttcgagaacattgttgaatgaaaatgaaattgtaatgttggaagaaatttgaaacattg 25858366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 21832222 - 21832187
Alignment:
Q  1 ttttgtaaggatgagttaggcccccaatttcaacac 36  Q
    |||||||||||||||||||||||| |||||||||||    
T  21832222 ttttgtaaggatgagttaggccccaaatttcaacac 21832187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 275 - 346
Target Start/End: Original strand, 30739466 - 30739537
Alignment:
Q  275 tttggtctatgtagttgagaacattgtcggatgaaaataaaattgtaatgttggataaaatttaaaacattg 346  Q
    |||||||||||| | ||  |||||||| |||||||||| ||||||||||||  ||| |||||| ||||||||    
T  30739466 tttggtctatgttgatggaaacattgttggatgaaaatgaaattgtaatgtcagatcaaatttcaaacattg 30739537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 36 - 135
Target Start/End: Original strand, 42362816 - 42362915
Alignment:
Q  36 caaaccaaaccaatccgcaatataagaaaagcacttattaaatatctatcatctaaatcaatactcataaaaattcaatgaaaactttaataaaatgaca 135  Q
    ||||||||||||| |||||| |||||| ||  | |||||||| || | ||| ||| | |||||||| || ||| |||||| ||||||| |||||||||||    
T  42362816 caaaccaaaccaaaccgcaacataagacaaatatttattaaacatatttcacctagaccaatactcttataaactcaatggaaacttttataaaatgaca 42362915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 50203880 - 50203845
Alignment:
Q  1 ttttgtaaggatgagttaggcccccaatttcaacac 36  Q
    |||||||||||||||||||||||| |||||||||||    
T  50203880 ttttgtaaggatgagttaggccccaaatttcaacac 50203845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 51642451 - 51642416
Alignment:
Q  1 ttttgtaaggatgagttaggcccccaatttcaacac 36  Q
    |||||||||||||||||||||||| |||||||||||    
T  51642451 ttttgtaaggatgagttaggccccaaatttcaacac 51642416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 4029667 - 4029633
Alignment:
Q  1 ttttgtaaggatgagttaggcccccaatttcaaca 35  Q
    |||||||||||||||||||||||| ||||||||||    
T  4029667 ttttgtaaggatgagttaggccccaaatttcaaca 4029633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 4256000 - 4256034
Alignment:
Q  1 ttttgtaaggatgagttaggcccccaatttcaaca 35  Q
    |||||||||||||||||||||||| ||||||||||    
T  4256000 ttttgtaaggatgagttaggccccaaatttcaaca 4256034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 9264109 - 9264075
Alignment:
Q  1 ttttgtaaggatgagttaggcccccaatttcaaca 35  Q
    |||||||||||||||||||||||| ||||||||||    
T  9264109 ttttgtaaggatgagttaggccccaaatttcaaca 9264075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 9264316 - 9264282
Alignment:
Q  1 ttttgtaaggatgagttaggcccccaatttcaaca 35  Q
    |||||||||||||||||||||||| ||||||||||    
T  9264316 ttttgtaaggatgagttaggccccaaatttcaaca 9264282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 21750556 - 21750590
Alignment:
Q  1 ttttgtaaggatgagttaggcccccaatttcaaca 35  Q
    |||||||||||||||||||||||| ||||||||||    
T  21750556 ttttgtaaggatgagttaggccccaaatttcaaca 21750590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 22407464 - 22407430
Alignment:
Q  1 ttttgtaaggatgagttaggcccccaatttcaaca 35  Q
    |||||||||||||||||||||||| ||||||||||    
T  22407464 ttttgtaaggatgagttaggccccaaatttcaaca 22407430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 22407671 - 22407637
Alignment:
Q  1 ttttgtaaggatgagttaggcccccaatttcaaca 35  Q
    |||||||||||||||||||||||| ||||||||||    
T  22407671 ttttgtaaggatgagttaggccccaaatttcaaca 22407637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 35011738 - 35011772
Alignment:
Q  1 ttttgtaaggatgagttaggcccccaatttcaaca 35  Q
    |||||||||||||||||||||||| ||||||||||    
T  35011738 ttttgtaaggatgagttaggccccaaatttcaaca 35011772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 35011945 - 35011979
Alignment:
Q  1 ttttgtaaggatgagttaggcccccaatttcaaca 35  Q
    |||||||||||||||||||||||| ||||||||||    
T  35011945 ttttgtaaggatgagttaggccccaaatttcaaca 35011979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 182 - 272
Target Start/End: Original strand, 36330420 - 36330509
Alignment:
Q  182 tatttatgtgctacttgaactcttcgataatgattaaaattttagtcttttgtatttcttatcaaataggattactttttgtccatgtttt 272  Q
    |||||| |||||||||||| | || || |||||| | ||| ||||||||||  ||||||||   ||||| |||||||||||||||||||||    
T  36330420 tatttacgtgctacttgaatttttagagaatgat-acaatcttagtctttttcatttcttacataatagaattactttttgtccatgtttt 36330509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 44573720 - 44573754
Alignment:
Q  1 ttttgtaaggatgagttaggcccccaatttcaaca 35  Q
    |||||||||||||||||||||||| ||||||||||    
T  44573720 ttttgtaaggatgagttaggccccaaatttcaaca 44573754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 44574017 - 44574051
Alignment:
Q  1 ttttgtaaggatgagttaggcccccaatttcaaca 35  Q
    |||||||||||||||||||||||| ||||||||||    
T  44574017 ttttgtaaggatgagttaggccccaaatttcaaca 44574051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 48685335 - 48685301
Alignment:
Q  1 ttttgtaaggatgagttaggcccccaatttcaaca 35  Q
    |||||||||||||||||||||||| ||||||||||    
T  48685335 ttttgtaaggatgagttaggccccaaatttcaaca 48685301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 50057110 - 50057144
Alignment:
Q  1 ttttgtaaggatgagttaggcccccaatttcaaca 35  Q
    |||||||||||||||||||||||| ||||||||||    
T  50057110 ttttgtaaggatgagttaggccccaaatttcaaca 50057144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 50057240 - 50057274
Alignment:
Q  1 ttttgtaaggatgagttaggcccccaatttcaaca 35  Q
    |||||||||||||||||||||||| ||||||||||    
T  50057240 ttttgtaaggatgagttaggccccaaatttcaaca 50057274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 50057370 - 50057404
Alignment:
Q  1 ttttgtaaggatgagttaggcccccaatttcaaca 35  Q
    |||||||||||||||||||||||| ||||||||||    
T  50057370 ttttgtaaggatgagttaggccccaaatttcaaca 50057404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 50692404 - 50692438
Alignment:
Q  1 ttttgtaaggatgagttaggcccccaatttcaaca 35  Q
    |||||||||||||||||||||||| ||||||||||    
T  50692404 ttttgtaaggatgagttaggccccaaatttcaaca 50692438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 50692607 - 50692641
Alignment:
Q  1 ttttgtaaggatgagttaggcccccaatttcaaca 35  Q
    |||||||||||||||||||||||| ||||||||||    
T  50692607 ttttgtaaggatgagttaggccccaaatttcaaca 50692641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 51338426 - 51338392
Alignment:
Q  1 ttttgtaaggatgagttaggcccccaatttcaaca 35  Q
    |||||||||||||||||||||||| ||||||||||    
T  51338426 ttttgtaaggatgagttaggccccaaatttcaaca 51338392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 51642658 - 51642624
Alignment:
Q  1 ttttgtaaggatgagttaggcccccaatttcaaca 35  Q
    |||||||||||||||||||||||| ||||||||||    
T  51642658 ttttgtaaggatgagttaggccccaaatttcaaca 51642624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 94 - 135
Target Start/End: Original strand, 2832040 - 2832081
Alignment:
Q  94 caatactcataaaaattcaatgaaaactttaataaaatgaca 135  Q
    ||||||||||||||| |||||| ||||||| |||||||||||    
T  2832040 caatactcataaaaactcaatgtaaacttttataaaatgaca 2832081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 16078886 - 16078849
Alignment:
Q  1 ttttgtaaggatgagttaggcccccaatttcaacacaa 38  Q
    |||| ||||| |||||||||||||||||||||||||||    
T  16078886 ttttttaaggttgagttaggcccccaatttcaacacaa 16078849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 216 - 272
Target Start/End: Original strand, 34635623 - 34635679
Alignment:
Q  216 taaaattttagtcttttgtatttcttatcaaataggattacttttt-gtccatgtttt 272  Q
    |||||| ||||||||||| |||||||||| |||||| ||||||||| |||||||||||    
T  34635623 taaaatattagtcttttgcatttcttatcgaatagg-ttactttttggtccatgtttt 34635679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 94 - 135
Target Start/End: Complemental strand, 44651390 - 44651349
Alignment:
Q  94 caatactcataaaaattcaatgaaaactttaataaaatgaca 135  Q
    ||||||||||| |||||||||| ||||||| |||||||||||    
T  44651390 caatactcatagaaattcaatggaaacttttataaaatgaca 44651349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 293 - 346
Target Start/End: Complemental strand, 51194449 - 51194396
Alignment:
Q  293 gaacattgtcggatgaaaataaaattgtaatgttggataaaatttaaaacattg 346  Q
    ||||||||| |||| ||||||||||||||||||| | | |||||| ||||||||    
T  51194449 gaacattgttggataaaaataaaattgtaatgtttgttcaaatttgaaacattg 51194396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 35 - 79
Target Start/End: Original strand, 2565897 - 2565941
Alignment:
Q  35 acaaaccaaaccaatccgcaatataagaaaagcacttattaaata 79  Q
    |||||||||||||| |||||||||||||||| | || ||||||||    
T  2565897 acaaaccaaaccaaaccgcaatataagaaaaactctaattaaata 2565941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 183 - 227
Target Start/End: Original strand, 3300351 - 3300395
Alignment:
Q  183 atttatgtgctacttgaactcttcgataatgattaaaattttagt 227  Q
    ||||||||||||||||||||||| || |||||| |||| ||||||    
T  3300351 atttatgtgctacttgaactcttagagaatgataaaaaatttagt 3300395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 4191145 - 4191113
Alignment:
Q  1 ttttgtaaggatgagttaggcccccaatttcaa 33  Q
    |||||||||||||||||||||||| ||||||||    
T  4191145 ttttgtaaggatgagttaggccccaaatttcaa 4191113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 21832714 - 21832682
Alignment:
Q  1 ttttgtaaggatgagttaggcccccaatttcaa 33  Q
    |||||||||||||||||||||||| ||||||||    
T  21832714 ttttgtaaggatgagttaggccccaaatttcaa 21832682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 121; Significance: 7e-62; HSPs: 83)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 36 - 373
Target Start/End: Original strand, 27507109 - 27507447
Alignment:
Q  36 caaaccaaaccaatccgcaatataagaaaagcacttattaaatatctatcatctaaatcaatactcataaaaattcaatgaaaactttaataaaatgaca 135  Q
    ||||||||||||| |||||||||||||||| |||| ||||||||| ||||||||| ||| ||||||||| |||||||||  |||||||| ||||||||||    
T  27507109 caaaccaaaccaaaccgcaatataagaaaaacactaattaaatatatatcatctagatcgatactcatagaaattcaattgaaactttagtaaaatgaca 27507208  T
Q  136 annnnnnnncttctgttgttaagtttcttttttgct------agcaaaaatgtatttatgtgctacttgaactcttcgataatgattaaaattttagtct 229  Q
              |||| ||||||||| |||| ||||||      | |||||||||||||||| | ||||| ||||||| |  |||||||||||||||||||     
T  27507209 tttttt----ttctcttgttaagtctcttctttgctttttctatcaaaaatgtatttatgcgttacttaaactcttagggaatgattaaaattttagtcc 27507304  T
Q  230 tttgtatttcttatcaaataggattactttttgtccatgttttattttggtctatgtagttgagaacattgtcggatgaaaataaaattgtaatgttgga 329  Q
    ||||||||| |||  ||||||||||||||||| |||| |||||| ||||||||  ||||||  ||||||| | ||||| |||||||||||||||||| ||    
T  27507305 tttgtattttttacaaaataggattactttttatccacgttttaatttggtcttcgtagttaggaacatttttggatggaaataaaattgtaatgtttga 27507404  T
Q  330 taaaatttaaaacattgcttaaaaatatgttgtgttttagcttt 373  Q
    ||||||||||| |||||| ||||||||||  |||||||| ||||    
T  27507405 taaaatttaaagcattgc-taaaaatatgccgtgttttaccttt 27507447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 38 - 373
Target Start/End: Original strand, 26344647 - 26344983
Alignment:
Q  38 aaccaaaccaatccgcaatataagaaaagcacttattaaatatctatcatctaaatcaatactcataaaaattcaatgaaaactttaataaaatgacaan 137  Q
    |||| |||||| |||||||||||||||  |||| ||| ||||| |||| | |  | ||||||||||| ||| | ||||| ||||||||||||||||||      
T  26344647 aaccgaaccaaaccgcaatataagaaatacactaattgaatatatatcgtttggaccaatactcatagaaactaaatgagaactttaataaaatgacata 26344746  T
Q  138 nnnnnnncttctgttgttaagtttcttttttgctag------caaaaatgtatttatgtgctacttgaactcttcgataatgattaaaattttagtcttt 231  Q
            |||| |||||||||||||| ||||||        |||||||||||| |||| |||| ||||||||| || |||||| ||||  |||||||||    
T  26344747 tttt----ttctcttgttaagtttcttctttgctttttctttcaaaaatgtattcatgtactacctgaactcttagagaatgataaaaaaattagtcttt 26344842  T
Q  232 tgtatttcttatcaaataggattactttttgtccatgttttattttggtctatgtagttgagaacattgtcggatgaaaataaaattgtaatgttggata 331  Q
    |||||||||||  |||||||||||||||||||||| |||| | |||||| || ||||||| ||||||| | ||||||||||||||||||||||||||||     
T  26344843 tgtatttcttacaaaataggattactttttgtccacgtttaaatttggtatacgtagttgggaacattattggatgaaaataaaattgtaatgttggatg 26344942  T
Q  332 aaatttaaaacattgcttaaaaatatgttgtgttttagcttt 373  Q
    |||||||||||||||| | |||||||||||||||||| ||||    
T  26344943 aaatttaaaacattgc-tgaaaatatgttgtgttttaacttt 26344983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 38 - 373
Target Start/End: Complemental strand, 6248557 - 6248228
Alignment:
Q  38 aaccaaaccaatccgcaatataagaaaagcacttattaaatatctatcatctaaatcaatactcataaaaattcaatgaaaactttaataaaatgacaan 137  Q
    ||||||||||| |||||||||||||||| |||| ||||||||| |||||  || | ||||||||||| |||||||||| |||||||||||||||||||      
T  6248557 aaccaaaccaaaccgcaatataagaaaaacactaattaaatatatatcacttagaccaatactcatagaaattcaatggaaactttaataaaatgacata 6248458  T
Q  138 nnnnnnncttctgttgttaagtttcttttttgct------agcaaaaatgtatttatgtgctacttgaactcttcgataatgattaaaattttagtcttt 231  Q
            | || |||||||||||||| ||||||      | ||||||||||||||||||||| ||||||| || || || ||| |||| ||||||||||    
T  6248457 tttt----tcctcttgttaagtttcttctttgctttttctatcaaaaatgtatttatgtgctaattgaacttttagagaaagataaaaaatttagtcttt 6248362  T
Q  232 tgtatttcttatcaaataggattactttttgtccatgttttattttggtctatgtagttgagaacattgtcggatgaaaataaaattgtaatgttggata 331  Q
    | |||||||||  ||||| |||||||||||||        ||  |||||||| |||||| ||||||||||  |||||||||||||||||||||||||||     
T  6248361 tctatttcttacaaaatatgattactttttgtg-------taccttggtctacgtagttcagaacattgtttgatgaaaataaaattgtaatgttggatt 6248269  T
Q  332 aaatttaaaacattgcttaaaaatatgttgtgttttagcttt 373  Q
    |||||||||||||||| | ||||||| |||||||||||||||    
T  6248268 aaatttaaaacattgc-tgaaaatatattgtgttttagcttt 6248228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 175 - 369
Target Start/End: Complemental strand, 34914476 - 34914283
Alignment:
Q  175 aaaaatgtatttatgtgctacttgaactcttcgataatgattaaaattttagtcttttgtatttcttatcaaataggattactttttgtccatgttttat 274  Q
    ||||||||||||||||||||||||||||||| || ||| || |||| ||||||||||| |||||||||  || | |||||||||||| |||| | ||||     
T  34914476 aaaaatgtatttatgtgctacttgaactcttagagaataataaaaaatttagtcttttatatttcttacaaagttggattactttttatccacggtttaa 34914377  T
Q  275 tttggtctatgtagttgagaacattgtcggatgaaaataaaattgtaatgttggataaaatttaaaacattgcttaaaaatatgttgtgttttag 369  Q
    ||||||||||||||||| ||||||||| |||||||||||||||||||| ||  ||| |||||||||||||||| | |||||||||||||||||||    
T  34914376 tttggtctatgtagttgggaacattgttggatgaaaataaaattgtaaggtcagatgaaatttaaaacattgc-tgaaaatatgttgtgttttag 34914283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 174 - 373
Target Start/End: Complemental strand, 12973913 - 12973716
Alignment:
Q  174 caaaaatgtatttatgtgctacttgaactcttcgataatgattaaaattttagtcttttgtatttcttatcaaataggattactttttgtccatgtttta 273  Q
    |||||||| |||||||| ||||||||||  || ||||||||| |||| |||||||||||||||||| ||| ||||| |||||||||||||||  |||| |    
T  12973913 caaaaatgcatttatgtactacttgaacatttagataatgataaaaaatttagtcttttgtatttcctat-aaatatgattactttttgtccgcgtttaa 12973815  T
Q  274 ttttggtctatgtagttgagaacattgtcggatgaaaataaaattgtaatgttggataaaatttaaaacattgcttaaaaatatgttgtgttttagcttt 373  Q
     ||||||||| || |||| ||||||||| | |||||||||||||||||||||||||| |||||||||||||||| ||||||||||||| |||||| ||||    
T  12973814 atttggtctacgttgttgggaacattgttgaatgaaaataaaattgtaatgttggatgaaatttaaaacattgc-taaaaatatgttgcgttttaacttt 12973716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 36 - 373
Target Start/End: Original strand, 52380329 - 52380668
Alignment:
Q  36 caaaccaaaccaatccgcaatataagaaaagcacttattaaatatctat--catctaaatcaatactcataaaaattcaatgaaaactttaataaaatga 133  Q
    |||||||||| || || ||||||||||||| |||| ||||||||| |||  || ||| | ||||||| ||| ||||||||| ||||||||||||||||||    
T  52380329 caaaccaaactaaaccccaatataagaaaaacactaattaaatatatatatcacctagaccaatacttatagaaattcaataaaaactttaataaaatga 52380428  T
Q  134 caannnnnnnncttctgttgttaagtttcttttttg------ctagcaaaaatgtatttatgtgctacttgaactcttcgataatgattaaaattttagt 227  Q
    ||          |||| |||||||||||||| ||||      ||| ||||||||||||||||||||| |||||||||| || ||| || ||| |||||||    
T  52380429 catatttt----ttctcttgttaagtttcttctttgttttttctatcaaaaatgtatttatgtgctatttgaactcttagagaatcataaaacttttagt 52380524  T
Q  228 cttttgtatttcttatcaaataggattactttttgtccatgttttattttggtctatgtagttgagaacattgtcggatgaaaataaaattgtaatgttg 327  Q
    |||||||||||||||  || || ||||||||||||| |  |||||| ||||||||| || |||  || |||||| ||||||| |||||||||||||||||    
T  52380525 cttttgtatttcttacaaactatgattactttttgtgcgcgttttaatttggtctacgttgttcggatcattgttggatgaagataaaattgtaatgttg 52380624  T
Q  328 gataaaatttaaaacattgcttaaaaatatgttgtgttttagcttt 373  Q
    ||| |||||||||| |||||   |||||||||| ||||||||||||    
T  52380625 gatgaaatttaaaa-attgc-ggaaaatatgttttgttttagcttt 52380668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 221 - 373
Target Start/End: Original strand, 40095195 - 40095346
Alignment:
Q  221 ttttagtcttttgtatttcttatcaaataggattactttttgtccatgttttattttggtctatgtagttgagaacattgtcggatgaaaataaaattgt 320  Q
    ||||||||||||||||||||||  |||||| ||||| ||||||||  |||| |  |||||||| ||||||| ||||||||| ||||||||||||||||||    
T  40095195 ttttagtcttttgtatttcttacaaaatagaattacattttgtccgcgtttaaagttggtctacgtagttgggaacattgttggatgaaaataaaattgt 40095294  T
Q  321 aatgttggataaaatttaaaacattgcttaaaaatatgttgtgttttagcttt 373  Q
    ||||||| || ||||||||||||||| || ||||||||||| |||||||||||    
T  40095295 aatgttgaatgaaatttaaaacattg-ttgaaaatatgttgcgttttagcttt 40095346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 248 - 373
Target Start/End: Complemental strand, 16063126 - 16063003
Alignment:
Q  248 taggattactttttgtccatgttttattttggtctatgtagttgagaacattgtcggatgaaaataaaattgtaatgttggataaaatttaaaacattgc 347  Q
    ||||||||||||||||||| |||||| ||||||||| ||||||||||||||||| ||||| |||||| ||||||||||||||| |||| |||||||||||    
T  16063126 taggattactttttgtccacgttttaatttggtctacgtagttgagaacattgttggatggaaataatattgtaatgttggatgaaatgtaaaacattgc 16063027  T
Q  348 ttaaaaatatgttgtgttttagcttt 373  Q
    |  ||||||||| |||||||||||||    
T  16063026 t--aaaatatgtcgtgttttagcttt 16063003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 175 - 353
Target Start/End: Original strand, 36782110 - 36782287
Alignment:
Q  175 aaaaatgtatttatgtgctacttgaactcttcgataatgattaaaattttagtcttttgtatttcttatcaaataggattactttttgtccatgttttat 274  Q
    ||||||||||||||||  ||||||||||||| || |||||| | || ||||||||||| |||||||||  || ||||||||||||| |||   |||| |     
T  36782110 aaaaatgtatttatgtattacttgaactcttagagaatgataacaaatttagtcttttatatttcttacaaagtaggattacttttcgtctgcgtttaaa 36782209  T
Q  275 tttggtctatgtagttgagaacattgtcggatgaaaataaaattgtaatgttggataaaatttaaaacattgcttaaaa 353  Q
    ||||||||||||||||| ||||||||| | || ||||||||||||||||||||||| |||||| |||||||||| ||||    
T  36782210 tttggtctatgtagttgggaacattgttgaataaaaataaaattgtaatgttggatgaaattt-aaacattgctgaaaa 36782287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 176 - 346
Target Start/End: Complemental strand, 25507221 - 25507052
Alignment:
Q  176 aaaatgtatttatgtgctacttgaactcttcgataatgattaaaattttagtcttttgtatttcttatcaaataggattactttttgtccatgttttatt 275  Q
    ||||| ||||||||||||||||||||| || ||  ||||| ||||| ||| ||||||| ||||||||  ||||| ||||||||||| ||||  ||||  |    
T  25507221 aaaatatatttatgtgctacttgaacttttagacgatgat-aaaatattaatcttttgcatttcttacaaaatatgattactttttatccactttttcat 25507123  T
Q  276 ttggtctatgtagttgagaacattgtcggatgaaaataaaattgtaatgttggataaaatttaaaacattg 346  Q
    || || ||||| ||| ||||| |||| ||||||||||||||||||||||||||||||||||||||||||||    
T  25507122 ttagtttatgttgtttagaactttgttggatgaaaataaaattgtaatgttggataaaatttaaaacattg 25507052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 165 - 366
Target Start/End: Complemental strand, 27350982 - 27350794
Alignment:
Q  165 ttttgctagcaaaaatgtatttatgtgctacttgaactcttcgataatgattaaaattttagtcttttgtatttcttatcaaataggattactttttgtc 264  Q
    |||| ||| |||||||||||||||||||||||||||||||| || |||||||||  ||||||||||           |  ||||||| ||||||||||||    
T  27350982 tttttctatcaaaaatgtatttatgtgctacttgaactcttagagaatgattaac-ttttagtctt-----------acaaaatagggttactttttgtc 27350895  T
Q  265 catgttttattttggtctatgtagttgagaacattgtcggatgaaaataaaattgtaatgttggataaaatttaaaacattgcttaaaaatatgttgtgt 364  Q
    || |||||| |||| |||| |||||||| || ||||| |||||||||||||||||||||||||||| |||||||||||| | | | ||||||||||||||    
T  27350894 caagttttaatttgctctacgtagttgaaaatattgttggatgaaaataaaattgtaatgttggatgaaatttaaaacagtac-tgaaaatatgttgtgt 27350796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 174 - 373
Target Start/End: Original strand, 8165280 - 8165477
Alignment:
Q  174 caaaaatgtatttatgtgctacttgaactcttcgataatgattaaaattttagtcttttgtatttcttatcaaataggattactttttgtccatg-tttt 272  Q
    |||||| ||||||||||||||||||||||||| |||||||| |||||| ||||||||||  ||||||||  ||||| || |||||||| |||| | ||||    
T  8165280 caaaaacgtatttatgtgctacttgaactcttagataatga-taaaatcttagtctttt-catttcttaaaaaatatgaatactttttttccaggttttt 8165377  T
Q  273 attttggtctatgtagttgagaacattgtcggatgaaaataaaattgtaatgttggataaaatttaaaacattgcttaaaaatatgttgtgttttagctt 372  Q
    |  ||||||||||| ||||  ||||||||   |||||||| ||||||||||||| ||| |||||||||||||| |  ||||||| ||||||||| |||||    
T  8165378 aacttggtctatgttgttggaaacattgtaaaatgaaaattaaattgtaatgtttgatgaaatttaaaacattac-gaaaaataggttgtgtttcagctt 8165476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 226 - 368
Target Start/End: Complemental strand, 3935753 - 3935612
Alignment:
Q  226 gtcttttgtatttcttatcaaataggattactttttgtccatgttttattttggtctatgtagttgagaacattgtcggatgaaaataaaattgtaatgt 325  Q
    |||||||||||||||||  ||||| ||||| |||||||||| |||||| |||||  ||  || |||| |||||||| ||||| |||||||||||||||||    
T  3935753 gtcttttgtatttcttacaaaataagattattttttgtccaagttttaatttggcatacataattgataacattgttggatggaaataaaattgtaatgt 3935654  T
Q  326 tggataaaatttaaaacattgcttaaaaatatgttgtgtttta 368  Q
    ||||| |||||||||||||||  | | ||||||||||||||||    
T  3935653 tggatgaaatttaaaacattg-atgagaatatgttgtgtttta 3935612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 174 - 310
Target Start/End: Original strand, 25559756 - 25559892
Alignment:
Q  174 caaaaatgtatttatgtgctacttgaactcttcgataatgattaaaattttagtcttttgtatttcttatcaaataggattactttttgtccatgtttta 273  Q
    ||||||||||||||| | |||||||||||||| |  |||||| ||||   | |||||||||||||||||  || | ||||||||||||||||| ||||||    
T  25559756 caaaaatgtatttatctactacttgaactcttagcgaatgataaaaaaaattgtcttttgtatttcttacaaagttggattactttttgtccacgtttta 25559855  T
Q  274 ttttggtctatgtagttgagaacattgtcggatgaaa 310  Q
     ||||||||| | ||||||||||||||| ||||||||    
T  25559856 atttggtctacgaagttgagaacattgttggatgaaa 25559892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 36 - 135
Target Start/End: Original strand, 6693700 - 6693799
Alignment:
Q  36 caaaccaaaccaatccgcaatataagaaaagcacttattaaatatctatcatctaaatcaatactcataaaaattcaatgaaaactttaataaaatgaca 135  Q
    ||||||||||||| |||||||||||||||| |||| ||||||||| |||||  |  | ||||||||||| ||| ||||||||||||||||||||||||||    
T  6693700 caaaccaaaccaaaccgcaatataagaaaaacactaattaaatatatatcacttggaccaatactcatagaaactcaatgaaaactttaataaaatgaca 6693799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 174 - 346
Target Start/End: Complemental strand, 44056079 - 44055906
Alignment:
Q  174 caaaaatgtatttatgtgctacttgaactcttcgataatgattaaaattttagtcttttgtatttcttatcaaataggattactttttgtccatg-tttt 272  Q
    ||||||||||||||||||||||||||||| || || ||||| |||||||| ||||||||| |||| |||  ||||| ||||||||||| |||| | ||||    
T  44056079 caaaaatgtatttatgtgctacttgaacttttagaaaatga-taaaatttaagtcttttgcatttattagaaaataagattactttttttccacgttttt 44055981  T
Q  273 attttggtctatgtagttgagaacattgtcggatgaaaataaaattgtaatg-ttggataaaatttaaaacattg 346  Q
    |  || |||||||| ||||  ||||||||   |||||||| |||||||| || ||| | ||||||||||||||||    
T  44055980 aacttagtctatgttgttggaaacattgtaaaatgaaaattaaattgtattgtttgaagaaaatttaaaacattg 44055906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 41 - 131
Target Start/End: Original strand, 26063814 - 26063904
Alignment:
Q  41 caaaccaatccgcaatataagaaaagcacttattaaatatctatcatctaaatcaatactcataaaaattcaatgaaaactttaataaaat 131  Q
    |||||||| |||||||||||||||| || | ||||||||| ||||| ||| | ||||||||||| ||| ||||||||||||||||||||||    
T  26063814 caaaccaaaccgcaatataagaaaaacattaattaaatatatatcacctagagcaatactcatagaaactcaatgaaaactttaataaaat 26063904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 182 - 366
Target Start/End: Original strand, 32910115 - 32910292
Alignment:
Q  182 tatttatgtgctacttgaactcttcgataatgattaaaattttagtcttttgtatttcttatcaaataggattactttttgtccatg-ttttattttggt 280  Q
    ||||||||||||||||||| | || || |||||  ||||| ||||||||||| ||||||||  |||||||||||  ||||||||||| |||||  |||||    
T  32910115 tatttatgtgctacttgaaattttagagaatgag-aaaatcttagtcttttgcatttcttacaaaataggattatgttttgtccatgtttttaacttggt 32910213  T
Q  281 ctatgtagttgagaacattgtcggatgaaaataaaattgtaatgttggataaaatttaaaacattgcttaaaaatatgttgtgttt 366  Q
    |||||| ||||  ||||||||      ||||| |||||||||| ||  || ||||||||||||||| || ||||||||||||||||    
T  32910214 ctatgttgttggaaacattgt------aaaatgaaattgtaatatttaatgaaatttaaaacattg-ttgaaaatatgttgtgttt 32910292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 174 - 346
Target Start/End: Complemental strand, 35375512 - 35375341
Alignment:
Q  174 caaaaatgtatttatgtgctacttgaactcttcgataatgattaaaattttagtcttttgtatttcttatcaaataggattactttttgtccatgtttt- 272  Q
    ||||| |||||| || ||||||||||||| || |  |||| ||||||| |||| |||||||||||||||| ||||| ||||||||||||| || |||||     
T  35375512 caaaagtgtattcatatgctacttgaacttttagtgaatg-ttaaaatattagacttttgtatttcttataaaatatgattactttttgttcacgtttta 35375414  T
Q  273 attttggtctatgtagttgagaacattgtcggatgaaaataaaattgtaatgttggataaaatttaaaacattg 346  Q
    | ||| |||| |||||||| |||  || |    ||||||| |||||||||||||||||||||| ||||||||||    
T  35375413 aattttgtctttgtagttgggaa-ttttttatttgaaaatgaaattgtaatgttggataaaatctaaaacattg 35375341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 43 - 135
Target Start/End: Original strand, 40094770 - 40094862
Alignment:
Q  43 aaccaatccgcaatataagaaaagcacttattaaatatctatcatctaaatcaatactcataaaaattcaatgaaaactttaataaaatgaca 135  Q
    |||||| || ||||||||||||| |||| ||||||||| |||||  | || ||||||||||| ||| ||||||||||||||||||||||||||    
T  40094770 aaccaaaccacaatataagaaaaacactaattaaatatatatcacttgaaccaatactcatagaaactcaatgaaaactttaataaaatgaca 40094862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 175 - 348
Target Start/End: Original strand, 25865752 - 25865911
Alignment:
Q  175 aaaaatgtatttatgtgctacttgaactcttcgataatgattaaaattttagtcttttgtatttcttatcaaataggattactttttgtccat-gtttta 273  Q
    |||||||||||||||||||||||||| | || || |||||| ||||||||||||||||  ||||| ||  ||||||||||||| |||||||||  |||||    
T  25865752 aaaaatgtatttatgtgctacttgaaatgttagagaatgat-aaaattttagtctttttcatttcataaaaaataggattactctttgtccatattttta 25865850  T
Q  274 ttttggtctatgtagttgagaacattgtcggatgaaaataaaattgtaatgttggataaaatttaaaacattgct 348  Q
     ||||||||              ||||| |||||||||||||||| ||||||| ||| |||||||||||||||||    
T  25865851 atttggtct--------------attgttggatgaaaataaaattttaatgttagatgaaatttaaaacattgct 25865911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 175 - 345
Target Start/End: Complemental strand, 19051466 - 19051293
Alignment:
Q  175 aaaaatgtatttatgtgctacttgaactcttcgataatgattaaaattttagtctttt-gtatttcttatcaaataggattactttttgtccatgttt-- 271  Q
    |||||||||||| ||||||||||||| | |  || |||||| ||| | ||||| |||| | ||||||||   |||| ||||||||||||||||  |||      
T  19051466 aaaaatgtatttctgtgctacttgaattttcagagaatgatgaaa-tcttagtttttttgcatttcttacataataagattactttttgtccacctttat 19051368  T
Q  272 -tattttggtctatgtagttgagaacattgtcggatgaaaataaaattgtaatgttggataaaatttaaaacatt 345  Q
     || |||| || ||||||||| || |||||| |||| ||||||||||||||||||| ||| ||||||||||||||    
T  19051367 ataatttgatcaatgtagttgcgagcattgttggataaaaataaaattgtaatgttagatgaaatttaaaacatt 19051293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 175 - 286
Target Start/End: Original strand, 36797797 - 36797908
Alignment:
Q  175 aaaaatgtatttatgtgctacttgaactcttcgataatgattaaaattttagtcttttgtatttcttatcaaataggattactttttgtccatgtt-tta 273  Q
    |||||| |||||||||||||||| || | || ||||||||| ||| |||||||||||| ||||||||||  |||| |||| ||||||||||| ||| |||    
T  36797797 aaaaatatatttatgtgctacttaaaatttttgataatgat-aaagttttagtcttttatatttcttatagaatatgattgctttttgtccaggttgtta 36797895  T
Q  274 ttttggtctatgt 286  Q
     ||||||||||||    
T  36797896 atttggtctatgt 36797908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 252 - 346
Target Start/End: Original strand, 16537637 - 16537732
Alignment:
Q  252 attactttttgtccatg-ttttattttggtctatgtagttgagaacattgtcggatgaaaataaaattgtaatgttggataaaatttaaaacattg 346  Q
    ||||||||||| ||||| ||||| ||||||||||||| || | ||||||||  ||||||||||||||||||||||  ||||||| |||||| ||||    
T  16537637 attactttttgaccatgcttttaatttggtctatgtatttaaaaacattgttagatgaaaataaaattgtaatgtcagataaaacttaaaatattg 16537732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 36 - 135
Target Start/End: Complemental strand, 18310452 - 18310353
Alignment:
Q  36 caaaccaaaccaatccgcaatataagaaaagcacttattaaatatctatcatctaaatcaatactcataaaaattcaatgaaaactttaataaaatgaca 135  Q
    ||||||||||||| |||||| || |||||  |||| |||||| || | |||| |||| ||||||| ||| |||||||||||||||||| |||||||||||    
T  18310452 caaaccaaaccaaaccgcaacattagaaatacactaattaaacatatgtcatttaaaccaatacttatagaaattcaatgaaaacttttataaaatgaca 18310353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 36 - 135
Target Start/End: Original strand, 18834158 - 18834257
Alignment:
Q  36 caaaccaaaccaatccgcaatataagaaaagcacttattaaatatctatcatctaaatcaatactcataaaaattcaatgaaaactttaataaaatgaca 135  Q
    |||| |||||||| || ||| ||||||||| |||| ||||||||| | ||| ||| | ||||||| ||||||| |||||||||||||| |||||||||||    
T  18834158 caaatcaaaccaaaccacaacataagaaaaacactaattaaatatatgtcacctagaccaatactaataaaaactcaatgaaaacttttataaaatgaca 18834257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 245 - 346
Target Start/End: Original strand, 9249903 - 9250005
Alignment:
Q  245 aaataggattactttttgtccatgttttat-tttggtctatgtagttgagaacattgtcggatgaaaataaaattgtaatgttggataaaatttaaaaca 343  Q
    |||||||||||| ||||||||||||||| | |||||| |||||| ||||||| ||||| |  | ||||| | ||||||||||| ||||||||||||| ||    
T  9249903 aaataggattacattttgtccatgttttttatttggtatatgtatttgagaagattgttgattaaaaatgacattgtaatgtttgataaaatttaaacca 9250002  T
Q  344 ttg 346  Q
    |||    
T  9250003 ttg 9250005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 174 - 346
Target Start/End: Complemental strand, 11537144 - 11536969
Alignment:
Q  174 caaaaatgtatttatgtgctacttgaactcttcgataatgat--taaaattttagtcttttgtatttcttatcaaataggattactttttgtc--catgt 269  Q
    ||||||||||||||  ||||||||||||| ||  | ||||||  |||||| |||   ||||| ||||||||  |||||||||||| ||||||   ||| |    
T  11537144 caaaaatgtatttacatgctacttgaacttttaaaaaatgataataaaatcttaactttttgcatttcttacgaaataggattacattttgttaacat-t 11537046  T
Q  270 tttattttggtctatgtagttgagaacattgtcggatgaaaataaaattgtaatgttggataaaatttaaaacattg 346  Q
    |||| ||||||||  |||||||  |||||||| ||||| |||| |||||||||||||  || |||||||||||||||    
T  11537045 tttaatttggtctgcgtagttgtaaacattgttggatgtaaatgaaattgtaatgttaaatgaaatttaaaacattg 11536969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 188 - 344
Target Start/End: Original strand, 39158059 - 39158214
Alignment:
Q  188 tgtgctacttgaactcttcgataatgattaaaattttagtcttttgtatttcttatcaaataggattactttttgtccatgtttt-attttggtctatgt 286  Q
    |||| |||||| ||| || |||||||  |||||| ||||| ||| | |||||||   ||||||||| ||||||| ||||| |||| | |||||| |||||    
T  39158059 tgtgttacttggacttttagataatg--taaaatcttagtatttagaatttctttcgaaataggataactttttatccatctttttaatttggtttatgt 39158156  T
Q  287 agttgagaacattgtcggatgaaaataaaattgtaatgttggataaaatttaaaacat 344  Q
     |||| |||||||||  ||||||||| |||||||||||||| || | |||||||||||    
T  39158157 tgttgggaacattgttagatgaaaatgaaattgtaatgttgaatgacatttaaaacat 39158214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 38 - 135
Target Start/End: Complemental strand, 3937243 - 3937147
Alignment:
Q  38 aaccaaaccaatccgcaatataagaaaagcacttattaaatatctatcatctaaatcaatactcataaaaattcaatgaaaactttaataaaatgaca 135  Q
    ||||||||||| | ||||||||| |||| |||| ||||||| | |||||| || | ||||||||||| ||||||||| ||||||||||| ||||||||    
T  3937243 aaccaaaccaaactgcaatataaaaaaa-cactaattaaatgtatatcatttataccaatactcatagaaattcaataaaaactttaattaaatgaca 3937147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 175 - 323
Target Start/End: Original strand, 11073108 - 11073256
Alignment:
Q  175 aaaaatgtatttatgtgctacttgaactcttcgataatgattaaaattttagtcttttgtatttcttatcaaataggattactttttgtccatgtttt-a 273  Q
    ||||| ||||||||||||||||| || | || || |||||| || || ||||||||||| ||||||||  |||||||||| | ||||||||||||||| |    
T  11073108 aaaaacgtatttatgtgctacttcaaattttagagaatgat-aacatcttagtcttttgcatttcttacaaaataggatttcgttttgtccatgttttga 11073206  T
Q  274 ttttggtctatgtagttgagaacattgtcggatgaaaataaaattgtaat 323  Q
      ||||||||||| ||||  ||||||||   | |||||| ||||||||||    
T  11073207 acttggtctatgttgttggaaacattgtaaaaagaaaatgaaattgtaat 11073256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 218 - 354
Target Start/End: Complemental strand, 18310244 - 18310107
Alignment:
Q  218 aaattttagtcttttgtatttcttatcaaataggattactttttgtccatgtttt-attttggtctatgtagttgagaacattgtcggatgaaaataaaa 316  Q
    |||| |||||||||| |||||||||  ||||| ||||||||||||| || ||||| | ||||||||||||||||| ||  ||| |  | ||||| | |||    
T  18310244 aaatcttagtcttttatatttcttacaaaatatgattactttttgttcacgttttaaatttggtctatgtagttgggatgattttttgttgaaattgaaa 18310145  T
Q  317 ttgtaatgttggataaaatttaaaacattgcttaaaaa 354  Q
    |||||||| ||||| |||| ||||||||| || |||||    
T  18310144 ttgtaatgctggatgaaatataaaacatttctaaaaaa 18310107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 235 - 346
Target Start/End: Original strand, 23474901 - 23475013
Alignment:
Q  235 atttcttatcaaataggattactttttgtccatgtttt-attttggtctatgtagttgagaacattgtcggatgaaaataaaattgtaatgttggataaa 333  Q
    ||||||||  ||||||||||| |||||||||| ||||| | |||||||||| |||||  ||||||||| | |||||||| ||  | ||||||||||| ||    
T  23474901 atttcttacaaaataggattagtttttgtccacgtttttaatttggtctatatagtttggaacattgttgaatgaaaatgaatctctaatgttggatgaa 23475000  T
Q  334 atttaaaacattg 346  Q
    |||| ||||||||    
T  23475001 atttgaaacattg 23475013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 210 - 261
Target Start/End: Original strand, 6694207 - 6694258
Alignment:
Q  210 aatgattaaaattttagtcttttgtatttcttatcaaataggattacttttt 261  Q
    |||||| ||||||||||||||||||||||||||  |||||||||||||||||    
T  6694207 aatgataaaaattttagtcttttgtatttcttacaaaataggattacttttt 6694258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 182 - 343
Target Start/End: Original strand, 32937811 - 32937973
Alignment:
Q  182 tatttatgtgctacttgaactcttcgataatgattaaaattttagtcttttgtatttcttatcaaataggattactttttgtccatgtt-ttattttggt 280  Q
    ||||||||||||||||||||  || || |||||| |||||||||||| |||  ||||||||   ||||||||||||||| |||||  || ||| ||||||    
T  32937811 tatttatgtgctacttgaacatttagagaatgat-aaaattttagtcctttacatttcttacataataggattacttttcgtccacattcttaatttggt 32937909  T
Q  281 ctat-gtagttgagaacattgtcggatgaaaataaaattgtaatgttggataaaatttaaaaca 343  Q
    || |  || ||   |||||||| |||||||||| ||||| ||||||||||| |||| |||||||    
T  32937910 ctctattattttgaaacattgttggatgaaaatgaaattttaatgttggatgaaatataaaaca 32937973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 229 - 346
Target Start/End: Complemental strand, 9330681 - 9330563
Alignment:
Q  229 ttttgtatttcttatcaaataggattactttttgtccatgtttt-attttggtctatgtagttgagaacattgtcggatgaaaataaaattgtaatgttg 327  Q
    ||||| ||||||||  |||||||||||| ||||| ||||||||| | ||||||  || |  ||| ||| ||||| |||| ||||||||| |||||||||     
T  9330681 ttttggatttcttacaaaataggattacattttgcccatgtttttaatttggtacatctctttgggaagattgttggataaaaataaaagtgtaatgttt 9330582  T
Q  328 gataaaatttaaaacattg 346  Q
    ||| |||||||||||||||    
T  9330581 gatgaaatttaaaacattg 9330563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 253 - 346
Target Start/End: Original strand, 39167082 - 39167176
Alignment:
Q  253 ttactttttgtccatgtttt-attttggtctatgtagttgagaacattgtcggatgaaaataaaattgtaatgttggataaaatttaaaacattg 346  Q
    |||||||| ||||||||||| | |||||| |||||   ||  |||||||  | |||||||||||||||||||||||||| |||||||||||||||    
T  39167082 ttacttttggtccatgtttttaatttggtttatgttaatgtaaacattgatgaatgaaaataaaattgtaatgttggatgaaatttaaaacattg 39167176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 174 - 286
Target Start/End: Original strand, 10847264 - 10847376
Alignment:
Q  174 caaaaatgtatttatgtgctacttgaactcttcgataatgattaaaattttagtcttttgtatttcttatcaaataggattactttttgtcca-tgtttt 272  Q
    |||||||||||||| |||||| ||||||| ||| | |||||| ||||| ||||||||||  ||||||||   ||||| |||||||||||||||   ||||    
T  10847264 caaaaatgtatttacgtgctatttgaacttttcaaaaatgat-aaaatcttagtcttttacatttcttacgtaatagaattactttttgtccacattttt 10847362  T
Q  273 attttggtctatgt 286  Q
    | ||||||||||||    
T  10847363 aatttggtctatgt 10847376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 227 - 370
Target Start/End: Complemental strand, 41751438 - 41751298
Alignment:
Q  227 tcttttgtatttcttatcaaataggattactttttgtccatgttttat--tttggtctatgtagttgagaacattgtcggatgaaaataaaattgtaatg 324  Q
    ||||||| ||||||||  |||||  |||||||||||||||| |||| |  ||||||    || ||||| |||||||| |||||||||| |||||||||||    
T  41751438 tcttttgcatttcttactaaataaaattactttttgtccatattttttgatttggt----gttgttgaaaacattgttggatgaaaatgaaattgtaatg 41751343  T
Q  325 ttggataaaatttaaaacattgcttaaaaatatgttgtgttttagc 370  Q
    |  ||| ||||| | ||||||| || |||||| |||||||||||||    
T  41751342 tcagatgaaattcataacattg-ttgaaaataagttgtgttttagc 41751298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 50 - 135
Target Start/End: Complemental strand, 50471570 - 50471485
Alignment:
Q  50 ccgcaatataagaaaagcacttattaaatatctatcatctaaatcaatactcataaaaattcaatgaaaactttaataaaatgaca 135  Q
    |||||||||||||||| |||  | ||||||| ||||| ||| | ||||||||||| ||| ||||||  ||||||||||||||||||    
T  50471570 ccgcaatataagaaaaacacgaaataaatatatatcacctagaccaatactcatagaaactcaatggtaactttaataaaatgaca 50471485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 72 - 135
Target Start/End: Complemental strand, 16063260 - 16063197
Alignment:
Q  72 attaaatatctatcatctaaatcaatactcataaaaattcaatgaaaactttaataaaatgaca 135  Q
    ||||||||| | | ||||||| ||||||||||| |||||||||  |||||||||||||||||||    
T  16063260 attaaatatatttaatctaaaccaatactcatagaaattcaatcgaaactttaataaaatgaca 16063197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 307 - 362
Target Start/End: Complemental strand, 51231977 - 51231923
Alignment:
Q  307 gaaaataaaattgtaatgttggataaaatttaaaacattgcttaaaaatatgttgt 362  Q
    |||||||||||||||||||||||| ||||||||||| ||| ||||||||| |||||    
T  51231977 gaaaataaaattgtaatgttggatgaaatttaaaacgttg-ttaaaaataagttgt 51231923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 304 - 369
Target Start/End: Complemental strand, 25532933 - 25532869
Alignment:
Q  304 gatgaaaataaaattgtaatgttggataaaatttaaaacattgcttaaaaatatgttgtgttttag 369  Q
    ||||||||| ||||| ||||||| ||| ||||||||||||||| ||  ||||||||||||||||||    
T  25532933 gatgaaaatgaaattttaatgtttgatgaaatttaaaacattg-ttggaaatatgttgtgttttag 25532869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 253 - 348
Target Start/End: Original strand, 15881955 - 15882048
Alignment:
Q  253 ttactttttgtccatgttttattttggtctatgtagttgagaacattgtcggatgaaaataaaattgtaatgttggataaaatttaaaacattgct 348  Q
    |||||||||||||| |||||  | |||||||| |||    ||||||||| |||| ||||| |||||||||| || ||| |||||||||||||||||    
T  15881955 ttactttttgtccacgtttt--tatggtctatctagcatggaacattgttggataaaaatgaaattgtaatatttgatgaaatttaaaacattgct 15882048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 21638289 - 21638253
Alignment:
Q  1 ttttgtaaggatgagttaggcccccaatttcaacaca 37  Q
    |||||||||||||||||||||||| ||||||||||||    
T  21638289 ttttgtaaggatgagttaggccccaaatttcaacaca 21638253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 306 - 346
Target Start/End: Original strand, 29923166 - 29923206
Alignment:
Q  306 tgaaaataaaattgtaatgttggataaaatttaaaacattg 346  Q
    ||||||||||||||||||||||||| ||||| |||||||||    
T  29923166 tgaaaataaaattgtaatgttggattaaattcaaaacattg 29923206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 257 - 344
Target Start/End: Complemental strand, 50310877 - 50310789
Alignment:
Q  257 tttttgtccatgtttt-attttggtctatgtagttgagaacattgtcggatgaaaataaaattgtaatgttggataaaatttaaaacat 344  Q
    |||||||||||||||| | |||||||||||| |    ||||||||| |||| ||| ||||||||||||||| ||| |||||| ||||||    
T  50310877 tttttgtccatgtttttaatttggtctatgttgaatggaacattgttggataaaagtaaaattgtaatgttagatcaaatttgaaacat 50310789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 174 - 266
Target Start/End: Original strand, 50951775 - 50951866
Alignment:
Q  174 caaaaatgtatttatgtgctacttgaactcttcgataatgattaaaattttagtcttttgtatttcttatcaaataggattactttttgtcca 266  Q
    |||||||||| |||||||||||||||| | ||  |||||||| |||| | |||||||||  ||||||||   |||| ||||||||||||||||    
T  50951775 caaaaatgtaattatgtgctacttgaaattttatataatgatgaaaa-tatagtcttttacatttcttacataataagattactttttgtcca 50951866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 314 - 369
Target Start/End: Complemental strand, 382272 - 382218
Alignment:
Q  314 aaattgtaatgttggataaaatttaaaacattgcttaaaaatatgttgtgttttag 369  Q
    ||||||||||||| ||| |||||||||||||||| |||||||| | ||||||||||    
T  382272 aaattgtaatgtttgatgaaatttaaaacattgc-taaaaataagatgtgttttag 382218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 4022148 - 4022113
Alignment:
Q  1 ttttgtaaggatgagttaggcccccaatttcaacac 36  Q
    |||||||||||||||||||||||| |||||||||||    
T  4022148 ttttgtaaggatgagttaggccccaaatttcaacac 4022113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 36 - 135
Target Start/End: Complemental strand, 8269131 - 8269032
Alignment:
Q  36 caaaccaaaccaatccgcaatataagaaaagcacttattaaatatctatcatctaaatcaatactcataaaaattcaatgaaaactttaataaaatgaca 135  Q
    |||||||||  || |||||| | ||||||| || | ||||||||| ||||||||| | ||||| | ||| ||| |||||| ||||||| |||||||||||    
T  8269131 caaaccaaataaaaccgcaacacaagaaaaacattaattaaatatatatcatctagaccaatatttatataaactcaatggaaacttttataaaatgaca 8269032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 38 - 133
Target Start/End: Complemental strand, 9330882 - 9330787
Alignment:
Q  38 aaccaaaccaatccgcaatataagaaaagcacttattaaatatctatcatctaaatcaatactcataaaaattcaatgaaaactttaataaaatga 133  Q
    ||||||| |||  ||||| ||||||||| || | |||||| || | ||| ||| | ||||||||||| ||| |||||||||||||| |||||||||    
T  9330882 aaccaaatcaaatcgcaacataagaaaaacattaattaaacatatgtcacctagaccaatactcatagaaactcaatgaaaacttttataaaatga 9330787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 303 - 362
Target Start/End: Original strand, 27770069 - 27770127
Alignment:
Q  303 ggatgaaaataaaattgtaatgttggataaaatttaaaacattgcttaaaaatatgttgt 362  Q
    |||||||||||||||| ||| ||||||| ||||||||||||||  ||||||||| |||||    
T  27770069 ggatgaaaataaaattttaacgttggatcaaatttaaaacatt-tttaaaaataagttgt 27770127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 38 - 129
Target Start/End: Original strand, 35979874 - 35979965
Alignment:
Q  38 aaccaaaccaatccgcaatataagaaaagcacttattaaatatctatcatctaaatcaatactcataaaaattcaatgaaaactttaataaa 129  Q
    ||||||||||| |||||| ||||||||| |||| ||||||| | | ||| ||| |  |||||||||| ||| |||||| ||||||| |||||    
T  35979874 aaccaaaccaaaccgcaacataagaaaaacactaattaaatctatgtcacctagacaaatactcatagaaactcaatggaaacttttataaa 35979965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 181 - 272
Target Start/End: Original strand, 35992341 - 35992431
Alignment:
Q  181 gtatttatgtgctacttgaactcttcgataatgattaaaattttagtcttttgtatttcttatcaaataggattactttttgtccatgtttt 272  Q
    |||||||||||||||||||||| || || ||| | |||||| ||||||||||  ||||||||   ||||| ||||| ||||||||| |||||    
T  35992341 gtatttatgtgctacttgaacttttagagaat-aataaaatcttagtcttttacatttcttacataatagaattacgttttgtccacgtttt 35992431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 304 - 371
Target Start/End: Complemental strand, 52829036 - 52828970
Alignment:
Q  304 gatgaaaataaaattgtaatgttggataaaatttaaaacattgcttaaaaatatgttgtgttttagct 371  Q
    ||||||||||||||||||||||| ||| |||||||||| |||| |   |||||||||||||| |||||    
T  52829036 gatgaaaataaaattgtaatgttagatgaaatttaaaatattg-tcggaaatatgttgtgttatagct 52828970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 2997079 - 2997045
Alignment:
Q  1 ttttgtaaggatgagttaggcccccaatttcaaca 35  Q
    |||||||||||||||||||||||| ||||||||||    
T  2997079 ttttgtaaggatgagttaggccccaaatttcaaca 2997045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 9380981 - 9381015
Alignment:
Q  1 ttttgtaaggatgagttaggcccccaatttcaaca 35  Q
    |||||||||||||||||||||||| ||||||||||    
T  9380981 ttttgtaaggatgagttaggccccaaatttcaaca 9381015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 174 - 272
Target Start/End: Original strand, 9961922 - 9962019
Alignment:
Q  174 caaaaatgtatttatgtgctacttgaactcttcgataatgattaaaattttagtcttttgtatttcttatcaaataggattactttttgtccatgtttt 272  Q
    ||||| ||||||||||||||||||||||| || || ||||| |||||| ||| | |||| |||||||||   ||||  |||||||| |||||| |||||    
T  9961922 caaaagtgtatttatgtgctacttgaacttttagagaatga-taaaatcttaatattttatatttcttacataataaaattactttgtgtccacgtttt 9962019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 15392185 - 15392219
Alignment:
Q  1 ttttgtaaggatgagttaggcccccaatttcaaca 35  Q
    |||||||||||||||||||||||| ||||||||||    
T  15392185 ttttgtaaggatgagttaggccccaaatttcaaca 15392219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 175 - 217
Target Start/End: Complemental strand, 16063167 - 16063125
Alignment:
Q  175 aaaaatgtatttatgtgctacttgaactcttcgataatgatta 217  Q
    |||||||||||||||| |||||||||||||| || ||||||||    
T  16063167 aaaaatgtatttatgtactacttgaactcttagagaatgatta 16063125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 174 - 272
Target Start/End: Complemental strand, 17989390 - 17989293
Alignment:
Q  174 caaaaatgtatttatgtgctacttgaactcttcgataatgattaaaattttagtcttttgtatttcttatcaaataggattactttttgtccatgtttt 272  Q
    ||||||| ||||||||||||||||||||| ||  | ||||| ||| || ||| |||||| |||||||||   ||||| |||||||| |||||| |||||    
T  17989390 caaaaatatatttatgtgctacttgaacttttatagaatga-taacatcttaatcttttatatttcttacataatagaattactttgtgtccacgtttt 17989293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 19481415 - 19481381
Alignment:
Q  1 ttttgtaaggatgagttaggcccccaatttcaaca 35  Q
    |||||||||||||||||||||||| ||||||||||    
T  19481415 ttttgtaaggatgagttaggccccaaatttcaaca 19481381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 20735603 - 20735637
Alignment:
Q  1 ttttgtaaggatgagttaggcccccaatttcaaca 35  Q
    |||||||||||||||||||||||| ||||||||||    
T  20735603 ttttgtaaggatgagttaggccccaaatttcaaca 20735637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 36 - 135
Target Start/End: Original strand, 25559614 - 25559715
Alignment:
Q  36 caaaccaaaccaatccgcaatataagaaaagcacttattaaatatctatcatctaaatcaatactc--ataaaaattcaatgaaaactttaataaaatga 133  Q
    ||||||||| ||| |||||||||||||||| || | ||||||||| |||||| || | ||||||||  ||| ||| ||||||  || || ||||||||||    
T  25559614 caaaccaaatcaaaccgcaatataagaaaaacaataattaaatatatatcatttataccaatactcgtatagaaactcaatgggaatttgaataaaatga 25559713  T
Q  134 ca 135  Q
    ||    
T  25559714 ca 25559715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 25799265 - 25799299
Alignment:
Q  1 ttttgtaaggatgagttaggcccccaatttcaaca 35  Q
    |||||||||||||||||||||||| ||||||||||    
T  25799265 ttttgtaaggatgagttaggccccaaatttcaaca 25799299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 29273089 - 29273055
Alignment:
Q  1 ttttgtaaggatgagttaggcccccaatttcaaca 35  Q
    |||||||||||||||||||||||| ||||||||||    
T  29273089 ttttgtaaggatgagttaggccccaaatttcaaca 29273055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 29273248 - 29273214
Alignment:
Q  1 ttttgtaaggatgagttaggcccccaatttcaaca 35  Q
    |||||||||||||||||||||||| ||||||||||    
T  29273248 ttttgtaaggatgagttaggccccaaatttcaaca 29273214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 33879801 - 33879767
Alignment:
Q  1 ttttgtaaggatgagttaggcccccaatttcaaca 35  Q
    |||||||||||||||||||||||| ||||||||||    
T  33879801 ttttgtaaggatgagttaggccccaaatttcaaca 33879767  T

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Target: chr1; HSP #70
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 33964454 - 33964488
Alignment:
Q  1 ttttgtaaggatgagttaggcccccaatttcaaca 35  Q
    |||||||||||||||||||||||| ||||||||||    
T  33964454 ttttgtaaggatgagttaggccccaaatttcaaca 33964488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 35926271 - 35926237
Alignment:
Q  1 ttttgtaaggatgagttaggcccccaatttcaaca 35  Q
    |||||||||||||||||||||||| ||||||||||    
T  35926271 ttttgtaaggatgagttaggccccaaatttcaaca 35926237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 43361575 - 43361541
Alignment:
Q  1 ttttgtaaggatgagttaggcccccaatttcaaca 35  Q
    ||||||||||||||||||| |||||||||||||||    
T  43361575 ttttgtaaggatgagttagacccccaatttcaaca 43361541  T

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Target: chr1; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 35
Target Start/End: Original strand, 9381181 - 9381214
Alignment:
Q  2 tttgtaaggatgagttaggcccccaatttcaaca 35  Q
    ||||||||||||||||||||||| ||||||||||    
T  9381181 tttgtaaggatgagttaggccccaaatttcaaca 9381214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 15392106 - 15392139
Alignment:
Q  1 ttttgtaaggatgagttaggcccccaatttcaac 34  Q
    |||||||||||||||||||||||| |||||||||    
T  15392106 ttttgtaaggatgagttaggccccaaatttcaac 15392139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 17419868 - 17419909
Alignment:
Q  1 ttttgtaaggatgagttaggcccccaatttcaacacaaacca 42  Q
    ||||||||||||||||||| |||| |||||||||| ||||||    
T  17419868 ttttgtaaggatgagttagaccccaaatttcaacataaacca 17419909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 38 - 135
Target Start/End: Complemental strand, 25507360 - 25507263
Alignment:
Q  38 aaccaaaccaatccgcaatataagaaaagcacttattaaatatctatcatctaaatcaatactcataaaaattcaatgaaaactttaataaaatgaca 135  Q
    ||||||||||| || ||| |||||||||  ||| ||||||||| | ||   |||  ||||| ||||| ||| |||||||||||||| |||||||||||    
T  25507360 aaccaaaccaaaccacaacataagaaaaaaactaattaaatatatgtctcataatccaatattcatagaaactcaatgaaaacttttataaaatgaca 25507263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 34076683 - 34076720
Alignment:
Q  1 ttttgtaaggatgagttaggcccccaatttcaacacaa 38  Q
    |||| ||||||||||||||||||| |||||||||||||    
T  34076683 ttttataaggatgagttaggccccaaatttcaacacaa 34076720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 174 - 242
Target Start/End: Complemental strand, 17652091 - 17652024
Alignment:
Q  174 caaaaatgtatttatgtgctacttgaactcttcgataatgattaaaattttagtcttttgtatttctta 242  Q
    ||||||||||||| ||||||||||||||| || || ||| | |||||| ||||||||||  ||||||||    
T  17652091 caaaaatgtatttttgtgctacttgaacttttagagaat-aataaaatcttagtcttttacatttctta 17652024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 19937066 - 19937030
Alignment:
Q  1 ttttgtaaggatgagttaggcccccaatttcaacaca 37  Q
    ||||||||||||||||||||| || ||||||||||||    
T  19937066 ttttgtaaggatgagttaggcaccgaatttcaacaca 19937030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 22892456 - 22892424
Alignment:
Q  1 ttttgtaaggatgagttaggcccccaatttcaa 33  Q
    |||||||||||||||||||||||| ||||||||    
T  22892456 ttttgtaaggatgagttaggccccaaatttcaa 22892424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 174 - 202
Target Start/End: Original strand, 36203186 - 36203214
Alignment:
Q  174 caaaaatgtatttatgtgctacttgaact 202  Q
    |||||||||||||||||||||||||||||    
T  36203186 caaaaatgtatttatgtgctacttgaact 36203214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 294 - 346
Target Start/End: Original strand, 39185450 - 39185502
Alignment:
Q  294 aacattgtcggatgaaaataaaattgtaatgttggataaaatttaaaacattg 346  Q
    |||||||| |||||||||  ||| ||| ||||||||| |||||||||||||||    
T  39185450 aacattgttggatgaaaacgaaactgttatgttggatcaaatttaaaacattg 39185502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 49828738 - 49828774
Alignment:
Q  1 ttttgtaaggatgagttaggcccccaatttcaacaca 37  Q
    ||||||||| |||||||||||||| ||||||||||||    
T  49828738 ttttgtaagaatgagttaggccccaaatttcaacaca 49828774  T

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Target: chr2 (Bit Score: 84; Significance: 8e-40; HSPs: 35)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 227 - 346
Target Start/End: Original strand, 5862458 - 5862577
Alignment:
Q  227 tcttttgtatttcttatcaaataggattactttttgtccatgttttattttggtctatgtagttgagaacattgtcggatgaaaataaaattgtaatgtt 326  Q
    ||||||||||||||||  |||| |||||||||||| ||||||||||| |||||||||  |||||||||||||||| ||||||||||||||||||||||||    
T  5862458 tcttttgtatttcttacaaaattggattactttttatccatgttttaatttggtctacttagttgagaacattgttggatgaaaataaaattgtaatgtt 5862557  T
Q  327 ggataaaatttaaaacattg 346  Q
    |||| |||||||||||||||    
T  5862558 ggatgaaatttaaaacattg 5862577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 175 - 373
Target Start/End: Complemental strand, 11678343 - 11678145
Alignment:
Q  175 aaaaatgtatttatg-tgctacttgaactcttcgataatgattaaaattttagtcttttgtatttcttatcaaataggattactttttgtccatgtttta 273  Q
    ||||||||||||| | | |||||||||||||| || ||||||  ||| |||||||||||||||||||||  ||||| |||||||||||||||  |||| |    
T  11678343 aaaaatgtatttacgatactacttgaactcttagagaatgatagaaaatttagtcttttgtatttcttacaaaatatgattactttttgtccgcgtttaa 11678244  T
Q  274 ttttggtctatgtagttgagaacattgtcggatgaaaataaaattgtaatgttggataaaatttaaaacattgcttaaaaatatgttgtgttttagcttt 373  Q
     |||| |||| ||||||| | ||||||| |||||||||||||||||||||| ||||| |||||||||| |||| || |||||||||| | ||||||||||    
T  11678243 atttgctctacgtagttgggtacattgttggatgaaaataaaattgtaatgctggatgaaatttaaaatattg-ttgaaaatatgttcttttttagcttt 11678145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 175 - 373
Target Start/End: Complemental strand, 11695821 - 11695623
Alignment:
Q  175 aaaaatgtatttatg-tgctacttgaactcttcgataatgattaaaattttagtcttttgtatttcttatcaaataggattactttttgtccatgtttta 273  Q
    ||||||||||||| | | |||||||||||||| || ||||||  ||| |||||||||||||||||||||  ||||| |||||||||||||||  |||| |    
T  11695821 aaaaatgtatttacgatactacttgaactcttagagaatgatagaaaatttagtcttttgtatttcttacaaaatatgattactttttgtccgcgtttaa 11695722  T
Q  274 ttttggtctatgtagttgagaacattgtcggatgaaaataaaattgtaatgttggataaaatttaaaacattgcttaaaaatatgttgtgttttagcttt 373  Q
     |||| |||| ||||||| | ||||||| |||||||||||||||||||||| ||||| |||||||||| |||| || |||||||||| | ||||||||||    
T  11695721 atttgctctacgtagttgggtacattgttggatgaaaataaaattgtaatgctggatgaaatttaaaatattg-ttgaaaatatgttcttttttagcttt 11695623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 175 - 366
Target Start/End: Complemental strand, 44085832 - 44085642
Alignment:
Q  175 aaaaatgtatttatgtgctacttgaactcttcgataatgattaaaattttagtcttttgtatttcttatcaaataggattactttttgtccatg-tttta 273  Q
    |||||||||||||||||||||||||| | || || |||||| ||||| | ||||||||||||||||||  |||||||||||| ||||||| ||| |||||    
T  44085832 aaaaatgtatttatgtgctacttgaaattttagagaatgat-aaaatctcagtcttttgtatttcttacaaaataggattacgttttgtctatgctttta 44085734  T
Q  274 ttttggtctatgtagttgagaacattgtcggatgaaaataaaattgtaatgttggataaaatttaaaacattgcttaaaaatatgttgtgttt 366  Q
      ||||||||||| ||||| ||||||||   |||||||| ||||| |||| || ||| |||||||||||||||| | ||||||||||||||||    
T  44085733 aattggtctatgttgttgaaaacattgtaaaatgaaaatgaaattataatatttgatgaaatttaaaacattgc-tgaaaatatgttgtgttt 44085642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 176 - 366
Target Start/End: Original strand, 30514681 - 30514870
Alignment:
Q  176 aaaatgtatttatgtgctacttgaactcttcgataatgattaaaattttagtcttttgtatttcttatcaaataggattactttttgtccatgtttt-at 274  Q
    |||||||||||||||| |||||||||| || || |||||| ||||| ||| |||||||||||||||    ||||  |||| |||||||||| ||||| |     
T  30514681 aaaatgtatttatgtg-tacttgaacttttagagaatgat-aaaatcttaatcttttgtatttcttgcagaatattattagtttttgtccacgtttttaa 30514778  T
Q  275 tttggtctatgtagttgagaacattgtcggatgaaaataaaattgtaatgttggataaaatttaaaacattgcttaaaaatatgttgtgttt 366  Q
     || |||||||| || |  |||||||| ||||| |||| |||||||||||||| || ||||||||||||||  ||  |||||||||||||||    
T  30514779 gttagtctatgttgtgggaaacattgttggatggaaatgaaattgtaatgttgaatgaaatttaaaacattattttgaaatatgttgtgttt 30514870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 175 - 266
Target Start/End: Original strand, 11377398 - 11377488
Alignment:
Q  175 aaaaatgtatttatgtgctacttgaactcttcgataatgattaaaattttagtcttttgtatttcttatcaaataggattactttttgtcca 266  Q
    |||||||||||||||||||| ||||||| || || |||||| ||||| ||||||||||||||||||||   |||||||||| ||||||||||    
T  11377398 aaaaatgtatttatgtgctatttgaacttttagagaatgat-aaaatcttagtcttttgtatttcttacagaataggattattttttgtcca 11377488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 284 - 373
Target Start/End: Complemental strand, 41461314 - 41461225
Alignment:
Q  284 tgtagttgagaacattgtcggatgaaaataaaattgtaatgttggat-aaaatttaaaacattgcttaaaaatatgttgtgttttagcttt 373  Q
    |||| ||||||||||||  |||||||||||||||||||||||||||| ||||||||||| ||| |   |||||||||||||||||||||||    
T  41461314 tgtatttgagaacattggtggatgaaaataaaattgtaatgttggatgaaaatttaaaatattac-ggaaaatatgttgtgttttagcttt 41461225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 175 - 272
Target Start/End: Original strand, 11051146 - 11051241
Alignment:
Q  175 aaaaatgtatttatgtgctacttgaactcttcgataatgattaaaattttagtcttttgtatttcttatcaaataggattactttttgtccatgtttt 272  Q
    |||||||||||||| ||||||||||||| || || ||||| |||||| | ||| | ||||||||||||   ||||||||||| |||||||||||||||    
T  11051146 aaaaatgtatttatatgctacttgaacttttagagaatga-taaaatatcagtttgttgtatttcttacataataggattac-ttttgtccatgtttt 11051241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 36 - 120
Target Start/End: Complemental strand, 12884859 - 12884775
Alignment:
Q  36 caaaccaaaccaatccgcaatataagaaaagcacttattaaatatctatcatctaaatcaatactcataaaaattcaatgaaaac 120  Q
    ||||||||||||| |||||||||| ||||| |||| ||||||||| ||||| ||| | ||||||| ||| ||| |||||| ||||    
T  12884859 caaaccaaaccaaaccgcaatatatgaaaaacactaattaaatatatatcacctagaccaatacttatagaaactcaatggaaac 12884775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 304 - 359
Target Start/End: Original strand, 27962526 - 27962580
Alignment:
Q  304 gatgaaaataaaattgtaatgttggataaaatttaaaacattgcttaaaaatatgt 359  Q
    ||||||||||||||||||| ||||||| ||||| ||||||||| ||||||||||||    
T  27962526 gatgaaaataaaattgtaacgttggatgaaattaaaaacattg-ttaaaaatatgt 27962580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 174 - 272
Target Start/End: Complemental strand, 1331339 - 1331242
Alignment:
Q  174 caaaaatgtatttatgtgctacttgaactcttcgataatgattaaaattttagtcttttgtatttcttatcaaataggattactttttgtccatgtttt 272  Q
    ||||||| ||||||||||||||||||||| ||  | ||| || ||||| ||||||||||  ||||||||   ||||| ||||||||||||||| |||||    
T  1331339 caaaaatatatttatgtgctacttgaacttttaaagaataat-aaaatcttagtcttttacatttcttacataatagaattactttttgtccacgtttt 1331242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 38 - 136
Target Start/End: Original strand, 12041190 - 12041288
Alignment:
Q  38 aaccaaaccaatccgcaatataagaaaagcacttattaaatatctatcatctaaatcaatactcataaaaattcaatgaaaactttaataaaatgacaa 136  Q
    ||||||||||| |||||| ||||||||| |  | ||||||| | | ||||||| | || |||||||| ||| |||||||||||||| |||||| |||||    
T  12041190 aaccaaaccaaaccgcaacataagaaaaactttaattaaatctatgtcatctagaccattactcatagaaactcaatgaaaacttttataaaacgacaa 12041288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 20999012 - 20998978
Alignment:
Q  1 ttttgtaaggatgagttaggcccccaatttcaaca 35  Q
    |||||||||||||||||||||||||||||||||||    
T  20999012 ttttgtaaggatgagttaggcccccaatttcaaca 20998978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 25621308 - 25621274
Alignment:
Q  1 ttttgtaaggatgagttaggcccccaatttcaaca 35  Q
    |||||||||||||||||||||||||||||||||||    
T  25621308 ttttgtaaggatgagttaggcccccaatttcaaca 25621274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 34775438 - 34775472
Alignment:
Q  1 ttttgtaaggatgagttaggcccccaatttcaaca 35  Q
    |||||||||||||||||||||||||||||||||||    
T  34775438 ttttgtaaggatgagttaggcccccaatttcaaca 34775472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 135
Target Start/End: Complemental strand, 13194388 - 13194291
Alignment:
Q  36 caaaccaaaccaatccgcaatataagaaaagcacttattaaatatctatcatctaaatcaatactcataaaaattcaatgaaaactttaataaaatgaca 135  Q
    ||||||||||||| || ||| ||||||||| |  | |||||||||  |||| ||| | ||||||||||| ||| |||||| ||||||| |||||||||||    
T  13194388 caaaccaaaccaaaccacaacataagaaaaactttaattaaatat--atcacctagaccaatactcatagaaaatcaatggaaacttttataaaatgaca 13194291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 174 - 357
Target Start/End: Original strand, 15320327 - 15320514
Alignment:
Q  174 caaaaatgtatttatgtgctacttgaactcttcgat-aatgattaaaattttagtcttttgtatttcttatcaaataggattactttttgtc----catg 268  Q
    ||||| ||||||||| ||||||||||||| ||   | |||| ||||||| ||||||||||||||||||||  ||||| ||||||||||| |     || |    
T  15320327 caaaagtgtatttatatgctacttgaactttttagtgaatg-ttaaaatcttagtcttttgtatttcttacaaaatatgattacttttttttttttcacg 15320425  T
Q  269 ttttat-tttggtctatgtagttgagaacattgtcggatgaaaataaaattgtaatgttggataaaatttaaaacattgcttaaaaatat 357  Q
    |||||  |||||| ||||||||||  ||  || |    ||||||| ||||||||||||||||| ||||||||||| ||| ||||||||||    
T  15320426 ttttaaatttggtgtatgtagttggaaatttttttaattgaaaatgaaattgtaatgttggatgaaatttaaaacgttg-ttaaaaatat 15320514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 306 - 346
Target Start/End: Original strand, 30759490 - 30759530
Alignment:
Q  306 tgaaaataaaattgtaatgttggataaaatttaaaacattg 346  Q
    ||||||||||||||||||||||||| |||||||||| ||||    
T  30759490 tgaaaataaaattgtaatgttggatgaaatttaaaatattg 30759530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 306 - 346
Target Start/End: Original strand, 30761605 - 30761645
Alignment:
Q  306 tgaaaataaaattgtaatgttggataaaatttaaaacattg 346  Q
    ||||||||||||||||||||||||| |||||||||| ||||    
T  30761605 tgaaaataaaattgtaatgttggatgaaatttaaaatattg 30761645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 23054407 - 23054442
Alignment:
Q  1 ttttgtaaggatgagttaggcccccaatttcaacac 36  Q
    |||||||||||||||||||||||| |||||||||||    
T  23054407 ttttgtaaggatgagttaggccccaaatttcaacac 23054442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 883931 - 883965
Alignment:
Q  1 ttttgtaaggatgagttaggcccccaatttcaaca 35  Q
    |||||||||||||||||||||||||||||| ||||    
T  883931 ttttgtaaggatgagttaggcccccaattttaaca 883965  T

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Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 21214224 - 21214190
Alignment:
Q  1 ttttgtaaggatgagttaggcccccaatttcaaca 35  Q
    |||||||||||||||||||||||| ||||||||||    
T  21214224 ttttgtaaggatgagttaggccccaaatttcaaca 21214190  T

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Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 57 - 135
Target Start/End: Complemental strand, 22014424 - 22014346
Alignment:
Q  57 ataagaaaagcacttattaaatatctatcatctaaatcaatactcataaaaattcaatgaaaactttaataaaatgaca 135  Q
    ||||||||| || | ||||||| | | ||||||| ||||||||||||| ||  |||||| ||||||| |||||||||||    
T  22014424 ataagaaaaacattaattaaatttatgtcatctagatcaatactcatagaatctcaatggaaacttttataaaatgaca 22014346  T

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Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 31761213 - 31761247
Alignment:
Q  1 ttttgtaaggatgagttaggcccccaatttcaaca 35  Q
    |||||||||||||||||||||||| ||||||||||    
T  31761213 ttttgtaaggatgagttaggccccaaatttcaaca 31761247  T

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Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 32667264 - 32667298
Alignment:
Q  1 ttttgtaaggatgagttaggcccccaatttcaaca 35  Q
    |||||||||||||||||||||||| ||||||||||    
T  32667264 ttttgtaaggatgagttaggccccaaatttcaaca 32667298  T

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Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 33985794 - 33985760
Alignment:
Q  1 ttttgtaaggatgagttaggcccccaatttcaaca 35  Q
    |||||||||||||||||||||||| ||||||||||    
T  33985794 ttttgtaaggatgagttaggccccaaatttcaaca 33985760  T

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Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 42768357 - 42768323
Alignment:
Q  1 ttttgtaaggatgagttaggcccccaatttcaaca 35  Q
    |||||||||||||||||||||||| ||||||||||    
T  42768357 ttttgtaaggatgagttaggccccaaatttcaaca 42768323  T

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Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 43195865 - 43195899
Alignment:
Q  1 ttttgtaaggatgagttaggcccccaatttcaaca 35  Q
    |||||||||||||||||||||||| ||||||||||    
T  43195865 ttttgtaaggatgagttaggccccaaatttcaaca 43195899  T

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Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 174 - 215
Target Start/End: Original strand, 5862395 - 5862436
Alignment:
Q  174 caaaaatgtatttatgtgctacttgaactcttcgataatgat 215  Q
    ||||||||||||||||||||||||||||| || || ||||||    
T  5862395 caaaaatgtatttatgtgctacttgaactattagagaatgat 5862436  T

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Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 174 - 266
Target Start/End: Complemental strand, 17763092 - 17763002
Alignment:
Q  174 caaaaatgtatttatgtgctacttgaactcttcgataatgattaaaattttagtcttttgtatttcttatcaaataggattactttttgtcca 266  Q
    |||||||||| ||| ||||||||||||   ||  | ||||||  |||| ||||||||||  |||||||||  |||||||||||||||||||||    
T  17763092 caaaaatgtacttacgtgctacttgaaaatttatagaatgat--aaatgttagtcttttacatttcttatataataggattactttttgtcca 17763002  T

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Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 35
Target Start/End: Original strand, 29923380 - 29923413
Alignment:
Q  2 tttgtaaggatgagttaggcccccaatttcaaca 35  Q
    ||||||||||||||||||||||| ||||||||||    
T  29923380 tttgtaaggatgagttaggccccaaatttcaaca 29923413  T

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Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 309 - 346
Target Start/End: Complemental strand, 43452364 - 43452327
Alignment:
Q  309 aaataaaattgtaatgttggataaaatttaaaacattg 346  Q
    ||||||||||||| |||||||| |||||||||||||||    
T  43452364 aaataaaattgtattgttggatgaaatttaaaacattg 43452327  T

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Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 306 - 346
Target Start/End: Complemental strand, 11651070 - 11651030
Alignment:
Q  306 tgaaaataaaattgtaatgttggataaaatttaaaacattg 346  Q
    |||||||||||||||||| || ||| |||||||||||||||    
T  11651070 tgaaaataaaattgtaatattagatgaaatttaaaacattg 11651030  T

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Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 306 - 346
Target Start/End: Complemental strand, 28790736 - 28790696
Alignment:
Q  306 tgaaaataaaattgtaatgttggataaaatttaaaacattg 346  Q
    |||||||||||||| |||||||||| |||||||||| ||||    
T  28790736 tgaaaataaaattgcaatgttggatgaaatttaaaatattg 28790696  T

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Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 95 - 135
Target Start/End: Complemental strand, 36075899 - 36075860
Alignment:
Q  95 aatactcataaaaattcaatgaaaactttaataaaatgaca 135  Q
    |||||||||||||||||||||| |||||| |||||||||||    
T  36075899 aatactcataaaaattcaatgataacttt-ataaaatgaca 36075860  T

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Target: scaffold0015 (Bit Score: 61; Significance: 4e-26; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 182 - 373
Target Start/End: Complemental strand, 62752 - 62561
Alignment:
Q  182 tatttatgtgctacttgaactcttcgataatgattaaaattttagtcttttgtatttcttatcaaataggattactttttgtccatgttttat-tttggt 280  Q
    ||||| |||| || ||||||||||  | |||||| |||| |||||||||||||| || |||  ||||   ||||||||||||||| |||| |  ||||||    
T  62752 tatttttgtggtatttgaactcttaaagaatgataaaaaatttagtcttttgtaatttttacaaaatttaattactttttgtccacgtttaaactttggt 62653  T
Q  281 ctatgtagttgagaacattgtcggatgaaaataaaattgtaatgttggataaaatttaaaacattgcttaaaaatatgttgtgttttagcttt 373  Q
     || ||||||| | |||||||  |||||||||||||| |||||||||||| |||||||||||||||| | ||||||| |||||||||| ||||    
T  62652 gtacgtagttgggtacattgtttgatgaaaataaaatcgtaatgttggatgaaatttaaaacattgc-tgaaaatatattgtgttttatcttt 62561  T

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Target: scaffold0210 (Bit Score: 32; Significance: 0.000000009; HSPs: 4)
Name: scaffold0210
Description:

Target: scaffold0210; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 182 - 241
Target Start/End: Original strand, 20377 - 20436
Alignment:
Q  182 tatttatgtgctacttgaactcttcgataatgattaaaattttagtcttttgtatttctt 241  Q
    ||||||||||||| ||||||||||  | ||||||  ||||||||||| ||||||||||||    
T  20377 tatttatgtgctaattgaactcttacagaatgatacaaattttagtcatttgtatttctt 20436  T

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Target: scaffold0210; HSP #2
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 182 - 241
Target Start/End: Original strand, 28269 - 28328
Alignment:
Q  182 tatttatgtgctacttgaactcttcgataatgattaaaattttagtcttttgtatttctt 241  Q
    ||||||||||||| ||||||||||  | ||||||  ||||||||||| ||||||||||||    
T  28269 tatttatgtgctaattgaactcttacagaatgatacaaattttagtcatttgtatttctt 28328  T

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Target: scaffold0210; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 73 - 133
Target Start/End: Original strand, 20266 - 20326
Alignment:
Q  73 ttaaatatctatcatctaaatcaatactcataaaaattcaatgaaaactttaataaaatga 133  Q
    |||||||| ||||||||||| ||||| ||||  ||| |||||| || ||||||||||||||    
T  20266 ttaaatatatatcatctaaaccaatattcatggaaactcaatgtaacctttaataaaatga 20326  T

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Target: scaffold0210; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 73 - 133
Target Start/End: Original strand, 28158 - 28218
Alignment:
Q  73 ttaaatatctatcatctaaatcaatactcataaaaattcaatgaaaactttaataaaatga 133  Q
    |||||||| ||||||||||| ||||| ||||  ||| |||||| || ||||||||||||||    
T  28158 ttaaatatatatcatctaaaccaatattcatggaaactcaatgtaacctttaataaaatga 28218  T

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Target: scaffold0989 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0989
Description:

Target: scaffold0989; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 2970 - 2936
Alignment:
Q  1 ttttgtaaggatgagttaggcccccaatttcaaca 35  Q
    |||||||||||||||||||||||| ||||||||||    
T  2970 ttttgtaaggatgagttaggccccaaatttcaaca 2936  T

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Target: scaffold0001 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 89 - 135
Target Start/End: Complemental strand, 428078 - 428032
Alignment:
Q  89 taaatcaatactcataaaaattcaatgaaaactttaataaaatgaca 135  Q
    |||| |||||||||| |||| |||||||||||||| |||||||||||    
T  428078 taaaccaatactcattaaaactcaatgaaaacttttataaaatgaca 428032  T

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Target: scaffold0059 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 290 - 342
Target Start/End: Original strand, 17787 - 17839
Alignment:
Q  290 tgagaacattgtcggatgaaaataaaattgtaatgttggataaaatttaaaac 342  Q
    |||||||||||| |||||||||| |  |||||||||||||| |||||| ||||    
T  17787 tgagaacattgttggatgaaaatgaggttgtaatgttggattaaatttgaaac 17839  T

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