View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11916_low_22 (Length: 311)
Name: NF11916_low_22
Description: NF11916
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11916_low_22 |
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Alignment Details
Target: chr8 (Bit Score: 254; Significance: 1e-141; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 1 - 299
Target Start/End: Original strand, 35204594 - 35204898
Alignment:
| Q |
1 |
ttcttgttggcaatccctcctttgatgcaaccaccaagcctcttgtatctttcaacaaattaaactt------ttataagcttaaaccaccaatatggtt |
94 |
Q |
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| T |
35204594 |
ttcttgttggcaatccctcctttgatgcaaccaccaagcctcttgtatctttcaacaaattaaacttgctttcttataagcttaaaccaccaatatggtt |
35204693 |
T |
|
| Q |
95 |
ttcccacaagaagagaaagagagtttagtatatgatttgagagtatcctcagttgggccaggtcatgccaccgggtcggatgtttttcacaatccgaacg |
194 |
Q |
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| T |
35204694 |
ttcccacaagaagagaaagagagcttagtgtatgatttgagagtatcctcagttgggccaggtcatgccaccgggtcggatgtttttcattatccgaacg |
35204793 |
T |
|
| Q |
195 |
gtttggacctggccatgaaacttcactaccttaaagtcgtttacttctttgactccgaggctgcacaaggcctaacaattaagaaaataaaagaatcatt |
294 |
Q |
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||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
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| T |
35204794 |
gtttggatctgaccatgaaacttcactaccttaaagtcgtttacttctttgactccgaggctgcacaaggcctaacaattaagaaaataaaagagtcatt |
35204893 |
T |
|
| Q |
295 |
gttca |
299 |
Q |
| |
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||||| |
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|
| T |
35204894 |
gttca |
35204898 |
T |
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