View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11917_high_6 (Length: 426)

Name: NF11917_high_6
Description: NF11917
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11917_high_6
NF11917_high_6
[»] chr3 (7 HSPs)
chr3 (84-337)||(11761666-11761918)
chr3 (14-149)||(52610370-52610505)
chr3 (171-302)||(52609822-52609953)
chr3 (205-328)||(3794862-3794984)
chr3 (178-258)||(52609915-52609995)
chr3 (198-280)||(50720301-50720382)
chr3 (198-280)||(50792466-50792547)
[»] chr5 (3 HSPs)
chr5 (14-149)||(11236170-11236305)
chr5 (198-337)||(11235553-11235692)
chr5 (178-258)||(11235717-11235797)
[»] chr6 (2 HSPs)
chr6 (161-337)||(34960335-34960514)
chr6 (24-91)||(34960017-34960084)
[»] chr8 (11 HSPs)
chr8 (51-149)||(23473152-23473250)
chr8 (72-149)||(34905888-34905965)
chr8 (84-149)||(23482682-23482747)
chr8 (178-258)||(23483122-23483202)
chr8 (14-65)||(23482633-23482684)
chr8 (171-270)||(23473785-23473885)
chr8 (198-263)||(23483231-23483296)
chr8 (180-245)||(34906323-34906388)
chr8 (198-258)||(23473763-23473823)
chr8 (210-270)||(34906385-34906445)
chr8 (255-337)||(34906565-34906647)
[»] chr4 (2 HSPs)
chr4 (220-338)||(43389918-43390035)
chr4 (220-338)||(14196538-14196654)
[»] chr7 (1 HSPs)
chr7 (76-141)||(38645580-38645645)
[»] chr2 (1 HSPs)
chr2 (160-280)||(23883302-23883423)


Alignment Details
Target: chr3 (Bit Score: 185; Significance: 1e-100; HSPs: 7)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 84 - 337
Target Start/End: Original strand, 11761666 - 11761918
Alignment:
Q  84 tccggcacggtggtcgccaacaaagttgctccgattgcaaaataaacatagaggttttgttgctgaaatttaaatgggaggggaataaaatttgattatt 183  Q
    |||||||||||||| ||  |||||||||||||||||||||||||||||||||||||| |||| ||||||| |||||||||||||||||||||||||||||    
T  11761666 tccggcacggtggttgctgacaaagttgctccgattgcaaaataaacatagaggttt-gttgttgaaattgaaatgggaggggaataaaatttgattatt 11761764  T
Q  184 ttgacataaaagaaaaagtgaaattggagggagataaaatttaattattttggcataagaggaaaagggaaattgagtaatatgattatgccaaaaacaa 283  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||| |||| |||||||||||||||||||    
T  11761765 ttgacataaaagaaaaagtgaaattggagggagataaaatttgattatgttggcataagaggaaaagggaaattgtgtaacatgattatgccaaaaacaa 11761864  T
Q  284 tatttaaagtgaaattaagnnnnnnnagttaatattcaattcattgaatttatt 337  Q
    |||||||||||||||||||       |||||||||||||||||||| |||||||    
T  11761865 tatttaaagtgaaattaagtttttttagttaatattcaattcattgcatttatt 11761918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 14 - 149
Target Start/End: Complemental strand, 52610505 - 52610370
Alignment:
Q  14 aaactcaccaagaaggagaaaaatggagtaaatggccgtcaaccacttttccagcgcagcagaggtgaactccggcacggtggtcgccaacaaagttgct 113  Q
    ||||||| || ||||||||||||||||||||||||||||||||||||||||| |||| | |||||||||||||||||| |||| |||| |||||||||||    
T  52610505 aaactcatcacgaaggagaaaaatggagtaaatggccgtcaaccacttttccggcgcggtagaggtgaactccggcacagtggccgccgacaaagttgct 52610406  T
Q  114 ccgattgcaaaataaacatagaggttttgttgctga 149  Q
    ||||||||||||||||||||| ||||||||||||||    
T  52610405 ccgattgcaaaataaacataggggttttgttgctga 52610370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 171 - 302
Target Start/End: Complemental strand, 52609953 - 52609822
Alignment:
Q  171 aaatttgattattttgacataaaagaaaaagtgaaattggagggagataaaatttaattattttggcataagaggaaaagggaaattgagtaatatgatt 270  Q
    |||||| ||||||||||||||| ||   |||||||||||||||||||| |||||| |||||||||||| || || |||||| ||||||||||||||||||    
T  52609953 aaatttcattattttgacataagaggggaagtgaaattggagggagatgaaatttgattattttggcacaaaagaaaaaggaaaattgagtaatatgatt 52609854  T
Q  271 atgccaaaaacaatatttaaagtgaaattaag 302  Q
     | |||||||||||| ||||| ||||||||||    
T  52609853 ctaccaaaaacaataattaaaatgaaattaag 52609822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 205 - 328
Target Start/End: Original strand, 3794862 - 3794984
Alignment:
Q  205 aattggagggagataaaatttaattattttggcataagaggaaaagggaaattgagtaatatgattatgccaaaaacaatatttaaagtgaaattaagnn 304  Q
    ||||||||||| || |||||| ||||| || |||||||||| |||| |||||||||||||||||||  | |||||| || | ||||||||||||||||      
T  3794862 aattggagggatatgaaatttgattatcttagcataagagggaaagtgaaattgagtaatatgatt-cggcaaaaaaaaaaattaaagtgaaattaagtt 3794960  T
Q  305 nnnnnagttaatattcaattcatt 328  Q
         |||| ||||||||||||||    
T  3794961 tttttagttgatattcaattcatt 3794984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 178 - 258
Target Start/End: Complemental strand, 52609995 - 52609915
Alignment:
Q  178 attattttgacataaaagaaaaagtgaaattggagggagataaaatttaattattttggcataagaggaaaagggaaattg 258  Q
    ||||||||| ||||| ||  ||||| ||||||||||||||| |||||| ||||||||| |||||||||  ||| |||||||    
T  52609995 attattttggcataagagggaaagtcaaattggagggagatgaaatttcattattttgacataagaggggaagtgaaattg 52609915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 198 - 280
Target Start/End: Original strand, 50720301 - 50720382
Alignment:
Q  198 aaagtgaaattggagggagataaaatttaattattttggcataagaggaaaagggaaattgagtaatatgattatgccaaaaa 280  Q
    ||||||||||  |||||| || |||||| ||||||||||||||| | | |||| | ||||||||| ||||||| |||||||||    
T  50720301 aaagtgaaatgtgagggatatgaaatttgattattttggcataaaaaggaaagtg-aattgagtattatgattctgccaaaaa 50720382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 198 - 280
Target Start/End: Complemental strand, 50792547 - 50792466
Alignment:
Q  198 aaagtgaaattggagggagataaaatttaattattttggcataagaggaaaagggaaattgagtaatatgattatgccaaaaa 280  Q
    ||||||||||  |||||| || |||||| ||||||||||||||| | | |||| | ||||||||| ||||||| |||||||||    
T  50792547 aaagtgaaatgtgagggatatgaaatttgattattttggcataaaaaggaaagtg-aattgagtattatgattctgccaaaaa 50792466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 108; Significance: 4e-54; HSPs: 3)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 14 - 149
Target Start/End: Complemental strand, 11236305 - 11236170
Alignment:
Q  14 aaactcaccaagaaggagaaaaatggagtaaatggccgtcaaccacttttccagcgcagcagaggtgaactccggcacggtggtcgccaacaaagttgct 113  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||| |||||||||||    
T  11236305 aaactcaacaagaaggagaaaaatggagtaaatggccgtcaaccacttttccggcgcggcagaggtgaactccggcacggtggtcgccgacaaagttgct 11236206  T
Q  114 ccgattgcaaaataaacatagaggttttgttgctga 149  Q
     | |||||||||||||||||| ||||||||||||||    
T  11236205 actattgcaaaataaacataggggttttgttgctga 11236170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 198 - 337
Target Start/End: Complemental strand, 11235692 - 11235553
Alignment:
Q  198 aaagtgaaattggagggagataaaatttaattattttggcataagaggaaaagggaaattgagtaatatgattatgccaaaaacaatatttaaagtgaaa 297  Q
    |||| |||||||||||||||| |||||| |||||||| ||| |||||||||||| |||||||||| |||||||  ||||| || |||| |||||||||||    
T  11235692 aaagagaaattggagggagatgaaatttgattattttcgcacaagaggaaaaggaaaattgagtagtatgattccgccaacaaaaataattaaagtgaaa 11235593  T
Q  298 ttaagnnnnnnnagttaatattcaattcattgaatttatt 337  Q
    |||||       |||||||||| ||||||||  |||||||    
T  11235592 ttaagtttttttagttaatattaaattcattacatttatt 11235553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 178 - 258
Target Start/End: Complemental strand, 11235797 - 11235717
Alignment:
Q  178 attattttgacataaaagaaaaagtgaaattggagggagataaaatttaattattttggcataagaggaaaagggaaattg 258  Q
    |||||||||  |||| || |||||| ||||||||||||||| |||||| ||||||| || |||||||| |||| |||||||    
T  11235797 attattttggtataagaggaaaagtaaaattggagggagatgaaatttgattatttcggtataagagggaaagtgaaattg 11235717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 77; Significance: 1e-35; HSPs: 2)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 161 - 337
Target Start/End: Original strand, 34960335 - 34960514
Alignment:
Q  161 gaggggaataaaatttgattattttgacataaaagaaaaagtgaaattggagggagataaaatttaattattttggcataagaggaaaagggaaattg-- 258  Q
    ||||| ||| |||||| ||||||||||||||| ||  |||||||||||| | |||||| |||||| |||||||| ||||||||||||||| |||||||      
T  34960335 gagggaaatgaaatttaattattttgacataagagggaaagtgaaattgaaaggagatgaaatttgattattttagcataagaggaaaagagaaattgag 34960434  T
Q  259 -agtaatatgattatgccaaaaacaatatttaaagtgaaattaagnnnnnnnagttaatattcaattcattgaatttatt 337  Q
     ||||||||||||||||||||||||||| ||||| ||||||||||       ||||||| |||||||||||  |||||||    
T  34960435 tagtaatatgattatgccaaaaacaataattaaaatgaaattaagttcttttagttaatgttcaattcattacatttatt 34960514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 24 - 91
Target Start/End: Original strand, 34960017 - 34960084
Alignment:
Q  24 agaaggagaaaaatggagtaaatggccgtcaaccacttttccagcgcagcagaggtgaactccggcac 91  Q
    ||||||||||| ||| |||||||| | |||||||||||| || |||||| ||||||||||||||||||    
T  34960017 agaaggagaaatatgaagtaaatgactgtcaaccactttcccggcgcagtagaggtgaactccggcac 34960084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 67; Significance: 1e-29; HSPs: 11)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 51 - 149
Target Start/End: Original strand, 23473152 - 23473250
Alignment:
Q  51 gtcaaccacttttccagcgcagcagaggtgaactccggcacggtggtcgccaacaaagttgctccgattgcaaaataaacatagaggttttgttgctga 149  Q
    ||||||||||||||  || | | |||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||| ||||||||||||||||    
T  23473152 gtcaaccacttttctggcacggtagaggtgaactccggcacggtggtcgccgacaaagttgctccaattgcaaaataaacatcgaggttttgttgctga 23473250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 72 - 149
Target Start/End: Original strand, 34905888 - 34905965
Alignment:
Q  72 gcagaggtgaactccggcacggtggtcgccaacaaagttgctccgattgcaaaataaacatagaggttttgttgctga 149  Q
    |||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  34905888 gcagaggtgaactctggcacggtgatcgccaacaaagttgctccgattgcaaaataaacataggggttttgttgctga 34905965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 84 - 149
Target Start/End: Original strand, 23482682 - 23482747
Alignment:
Q  84 tccggcacggtggtcgccaacaaagttgctccgattgcaaaataaacatagaggttttgttgctga 149  Q
    |||||||||||||||||| | ||||||||| | |||||||||||||||||| ||||||||||||||    
T  23482682 tccggcacggtggtcgccgataaagttgctactattgcaaaataaacataggggttttgttgctga 23482747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 178 - 258
Target Start/End: Original strand, 23483122 - 23483202
Alignment:
Q  178 attattttgacataaaagaaaaagtgaaattggagggagataaaatttaattattttggcataagaggaaaagggaaattg 258  Q
    ||||||||| ||||| ||  ||||||||||||||||||||| |||||| |||||||| |||||||||| |||| |||||||    
T  23483122 attattttggcataagagggaaagtgaaattggagggagatgaaatttgattattttagcataagagggaaagtgaaattg 23483202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 14 - 65
Target Start/End: Original strand, 23482633 - 23482684
Alignment:
Q  14 aaactcaccaagaaggagaaaaatggagtaaatggccgtcaaccacttttcc 65  Q
    ||||||||||||||||||||||||||||||||||| ||||||||| ||||||    
T  23482633 aaactcaccaagaaggagaaaaatggagtaaatggtcgtcaaccaattttcc 23482684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 171 - 270
Target Start/End: Original strand, 23473785 - 23473885
Alignment:
Q  171 aaatttgattattttgacataaaagaaaaagtgaaattggagggagataaaatttaatta-ttttggcataagaggaaaagggaaattgagtaatatgat 269  Q
    ||||| |||||||||| ||||| |   ||||||||||||||||||||| | |||| |||| ||||  ||||| |||||||||||||| ||||||||||||    
T  23473785 aaattcgattattttggcataagaaggaaagtgaaattggagggagatgacatttgattatttttatcataaaaggaaaagggaaatggagtaatatgat 23473884  T
Q  270 t 270  Q
    |    
T  23473885 t 23473885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 198 - 263
Target Start/End: Original strand, 23483231 - 23483296
Alignment:
Q  198 aaagtgaaattggagggagataaaatttaattattttggcataagaggaaaagggaaattgagtaa 263  Q
    |||| |||||||||||||||| |||||| |||||||| ||||| || ||||||| |||||||||||    
T  23483231 aaagagaaattggagggagatgaaatttgattatttttgcatatgaagaaaaggaaaattgagtaa 23483296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 180 - 245
Target Start/End: Original strand, 34906323 - 34906388
Alignment:
Q  180 tattttgacataaaagaaaaagtgaaattggagggagataaaatttaattattttggcataagagg 245  Q
    ||||||| ||| | || |||||||||||||||||||||| |||||| ||||||||| |||||||||    
T  34906323 tattttggcatgagaggaaaagtgaaattggagggagatgaaattttattattttgacataagagg 34906388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 198 - 258
Target Start/End: Original strand, 23473763 - 23473823
Alignment:
Q  198 aaagtgaaattggagggagataaaatttaattattttggcataagaggaaaagggaaattg 258  Q
    ||||||||||||||||||||| |||||  ||||||||||||||||| | |||| |||||||    
T  23473763 aaagtgaaattggagggagatgaaattcgattattttggcataagaaggaaagtgaaattg 23473823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 210 - 270
Target Start/End: Original strand, 34906385 - 34906445
Alignment:
Q  210 gagggagataaaatttaattattttggcataagaggaaaagggaaattgagtaatatgatt 270  Q
    |||||| || |||||| |||||||||||| ||||| |||||| ||| ||||||||||||||    
T  34906385 gagggaaatgaaatttgattattttggcaaaagagaaaaaggaaaagtgagtaatatgatt 34906445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 337
Target Start/End: Original strand, 34906565 - 34906647
Alignment:
Q  255 attgagtaatatgattatgccaaaaacaatatttaaagtgaaattaagnnnnnnnagttaatattcaattcattgaatttatt 337  Q
    |||||||||||||||| | |||||||||||| ||||| ||| ||||||       ||||| |||||||||||||  |||||||    
T  34906565 attgagtaatatgattctaccaaaaacaataattaaaatgacattaagtttttttagttagtattcaattcattacatttatt 34906647  T

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Target: chr4 (Bit Score: 50; Significance: 2e-19; HSPs: 2)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 220 - 338
Target Start/End: Original strand, 43389918 - 43390035
Alignment:
Q  220 aaatttaattattttggcataagaggaaaagggaaattgagtaatatgattatgccaaaaacaatatttaaagtgaaattaagnnnnnnnagttaatatt 319  Q
    |||||| |||||||| |||| ||||| |||| ||||||||||||||||||| ||| ||||| |||| ||||||||||||||||       ||||||||||    
T  43389918 aaatttgattattttagcattagagggaaagtgaaattgagtaatatgattctgctaaaaa-aataattaaagtgaaattaagtttttttagttaatatt 43390016  T
Q  320 caattcattgaatttattc 338  Q
    |||||||||  ||||||||    
T  43390017 caattcattacatttattc 43390035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 220 - 338
Target Start/End: Original strand, 14196538 - 14196654
Alignment:
Q  220 aaatttaattattttggcataagaggaaaagggaaattgagtaatatgattatgccaaaaacaatatttaaagtgaaattaagnnnnnnnagttaatatt 319  Q
    |||||| ||||||||  |||||||||  ||| |||||||||||||||||||  || ||||  |||| ||||||||||||||||       ||||||||||    
T  14196538 aaatttgattattttaccataagaggggaagtgaaattgagtaatatgattcagctaaaa--aataattaaagtgaaattaagtttttttagttaatatt 14196635  T
Q  320 caattcattgaatttattc 338  Q
    |||||||||  ||||||||    
T  14196636 caattcattacatttattc 14196654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 76 - 141
Target Start/End: Complemental strand, 38645645 - 38645580
Alignment:
Q  76 aggtgaactccggcacggtggtcgccaacaaagttgctccgattgcaaaataaacatagaggtttt 141  Q
    ||||||| ||||||| |||||||||| |||| |||||||||||||  ||| |||||||||||||||    
T  38645645 aggtgaattccggcaaggtggtcgccgacaatgttgctccgattgtgaaacaaacatagaggtttt 38645580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 160 - 280
Target Start/End: Original strand, 23883302 - 23883423
Alignment:
Q  160 ggaggggaataaaatttgattattttgacataaaagaaaaagtgaaattgga-gggagataaaatttaattattttggcataagaggaaaagggaaattg 258  Q
    |||||| ||| ||||||||||||||||| || | ||  ||||| |||| | | |||| || ||||||||||||||||||||| |||| |||  |||||||    
T  23883302 ggagggaaatgaaatttgattattttgatattagagggaaagtaaaatagaacgggaaatgaaatttaattattttggcataggagggaaaatgaaattg 23883401  T
Q  259 agtaatatgattatgccaaaaa 280  Q
      |||||||||| |||||||||    
T  23883402 gttaatatgattctgccaaaaa 23883423  T

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