View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11919_high_5 (Length: 288)
Name: NF11919_high_5
Description: NF11919
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11919_high_5 |
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Alignment Details
Target: chr8 (Bit Score: 258; Significance: 1e-144; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 258; E-Value: 1e-144
Query Start/End: Original strand, 13 - 270
Target Start/End: Original strand, 45403767 - 45404024
Alignment:
| Q |
13 |
agatgaagcaaattgagggaaaaagaaaaggaaagggagtttcatttattgccttgatggagtttcatcaatggtctccaatgctggtctccaagatctc |
112 |
Q |
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| T |
45403767 |
agatgaagcaaattgagggaaaaagaaaaggaaagggagtttcatttattgccttgatggagtttcatcaatggtctccaatgctggtctccaagatctc |
45403866 |
T |
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| Q |
113 |
tgcttggagtaccttttaacaggttcagcctcccttagcatctcataattatcagattctaatactattttctttgcctccgaagggaacatgcagaact |
212 |
Q |
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| T |
45403867 |
tgcttggagtaccttttaacaggttcagcctcccttagcatctcataattatcagattctaatactattttctttgcctccgaagggaacatgcagaact |
45403966 |
T |
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| Q |
213 |
cactgaaaacaggaaatatctttcccaaattgttgaaactggcatgcttggtggccct |
270 |
Q |
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| T |
45403967 |
cactgaaaacaggaaatatctttcccaaattgttgaaactggcatgcttggtggccct |
45404024 |
T |
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