View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11922_high_11 (Length: 317)

Name: NF11922_high_11
Description: NF11922
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11922_high_11
NF11922_high_11
[»] chr7 (32 HSPs)
chr7 (1-303)||(29784364-29784664)
chr7 (1-103)||(18443178-18443280)
chr7 (13-103)||(884684-884775)
chr7 (13-103)||(1244013-1244104)
chr7 (13-103)||(28898457-28898548)
chr7 (13-103)||(41298246-41298337)
chr7 (6-103)||(1244433-1244530)
chr7 (6-103)||(18443599-18443696)
chr7 (6-103)||(28898031-28898128)
chr7 (6-103)||(41298666-41298763)
chr7 (1-103)||(33847868-33847970)
chr7 (6-103)||(29783937-29784034)
chr7 (13-103)||(22954048-22954138)
chr7 (6-103)||(33848287-33848384)
chr7 (27-103)||(28838527-28838604)
chr7 (27-103)||(20544321-20544398)
chr7 (15-103)||(30939563-30939652)
chr7 (17-64)||(17075618-17075665)
chr7 (24-62)||(10466659-10466697)
chr7 (26-103)||(20544148-20544226)
chr7 (7-64)||(22948869-22948926)
chr7 (15-64)||(27310089-27310138)
chr7 (7-64)||(27311039-27311096)
chr7 (7-64)||(42750109-42750166)
chr7 (17-64)||(17075261-17075308)
chr7 (17-64)||(32092270-32092317)
chr7 (7-58)||(32092520-32092571)
chr7 (17-62)||(11974708-11974753)
chr7 (7-64)||(20543953-20544010)
chr7 (7-52)||(28838406-28838451)
chr7 (17-62)||(28852737-28852782)
chr7 (7-64)||(44803623-44803680)
[»] chr6 (28 HSPs)
chr6 (1-103)||(6162247-6162349)
chr6 (1-103)||(20824166-20824268)
chr6 (13-103)||(33106931-33107022)
chr6 (1-103)||(14257149-14257251)
chr6 (6-103)||(14257568-14257665)
chr6 (1-103)||(15147720-15147822)
chr6 (6-103)||(6162678-6162775)
chr6 (6-103)||(33107351-33107448)
chr6 (6-103)||(34984535-34984631)
chr6 (1-103)||(20228220-20228322)
chr6 (1-103)||(22122204-22122306)
chr6 (15-103)||(20824594-20824682)
chr6 (8-103)||(15148141-15148236)
chr6 (8-103)||(20522148-20522243)
chr6 (26-103)||(14712832-14712910)
chr6 (7-103)||(7645973-7646070)
chr6 (7-64)||(20521227-20521284)
chr6 (17-64)||(8710341-8710388)
chr6 (7-103)||(20227059-20227155)
chr6 (7-103)||(22121043-22121139)
chr6 (17-64)||(211483-211530)
chr6 (25-64)||(4510230-4510269)
chr6 (17-64)||(5974053-5974100)
chr6 (17-64)||(17157588-17157635)
chr6 (17-64)||(19595650-19595697)
chr6 (7-53)||(1869504-1869550)
chr6 (30-103)||(17157787-17157861)
chr6 (26-62)||(8709604-8709640)
[»] chr4 (61 HSPs)
chr4 (1-103)||(28505211-28505313)
chr4 (1-103)||(21235030-21235132)
chr4 (1-103)||(28957727-28957829)
chr4 (1-103)||(38026092-38026194)
chr4 (6-103)||(12922644-12922741)
chr4 (13-103)||(1317062-1317153)
chr4 (13-103)||(30545715-30545806)
chr4 (13-103)||(46263063-46263154)
chr4 (1-103)||(2669423-2669525)
chr4 (13-100)||(12923070-12923158)
chr4 (13-103)||(43979559-43979650)
chr4 (1-103)||(31228295-31228397)
chr4 (1-103)||(40841464-40841566)
chr4 (1-103)||(55347563-55347665)
chr4 (6-103)||(789897-789994)
chr4 (6-103)||(2669009-2669106)
chr4 (6-103)||(43979979-43980076)
chr4 (13-103)||(790323-790414)
chr4 (1-103)||(12108274-12108376)
chr4 (6-103)||(21235451-21235547)
chr4 (6-103)||(30546136-30546233)
chr4 (6-103)||(38025678-38025775)
chr4 (6-103)||(46262637-46262734)
chr4 (15-103)||(28957313-28957401)
chr4 (15-103)||(31227881-31227969)
chr4 (6-103)||(40841883-40841980)
chr4 (5-103)||(47053763-47053862)
chr4 (6-103)||(54142327-54142425)
chr4 (6-103)||(1317482-1317579)
chr4 (5-103)||(47058496-47058595)
chr4 (6-64)||(54167536-54167594)
chr4 (7-103)||(49426343-49426440)
chr4 (7-103)||(54143492-54143589)
chr4 (17-98)||(55347970-55348051)
chr4 (17-103)||(12107708-12107794)
chr4 (17-103)||(17288374-17288461)
chr4 (30-103)||(1791389-1791463)
chr4 (26-103)||(10580042-10580120)
chr4 (23-103)||(26168167-26168248)
chr4 (30-103)||(35166708-35166782)
chr4 (7-64)||(3296935-3296992)
chr4 (7-64)||(29691567-29691624)
chr4 (7-62)||(17287531-17287586)
chr4 (9-60)||(28505634-28505685)
chr4 (7-62)||(49424498-49424553)
chr4 (7-64)||(3296585-3296642)
chr4 (7-64)||(51906810-51906867)
chr4 (26-62)||(29691749-29691785)
chr4 (17-64)||(30953002-30953049)
chr4 (17-64)||(34129301-34129348)
chr4 (30-64)||(3296759-3296793)
chr4 (28-62)||(5545023-5545057)
chr4 (26-103)||(7118003-7118080)
chr4 (7-64)||(30608287-30608344)
chr4 (7-64)||(30608624-30608681)
chr4 (7-64)||(38759746-38759803)
chr4 (7-64)||(48553938-48553995)
chr4 (7-64)||(51906462-51906519)
chr4 (28-64)||(7118176-7118212)
chr4 (7-51)||(35166857-35166901)
chr4 (16-64)||(54168823-54168871)
[»] chr8 (34 HSPs)
chr8 (1-103)||(29917523-29917625)
chr8 (6-103)||(29917107-29917204)
chr8 (13-102)||(12734601-12734691)
chr8 (8-103)||(24845965-24846060)
chr8 (6-103)||(12734175-12734272)
chr8 (7-103)||(36155273-36155370)
chr8 (5-54)||(4624412-4624461)
chr8 (16-103)||(4624535-4624623)
chr8 (17-72)||(22601532-22601587)
chr8 (7-64)||(6297853-6297910)
chr8 (7-103)||(44148579-44148676)
chr8 (17-64)||(6298036-6298083)
chr8 (6-64)||(20682750-20682808)
chr8 (6-103)||(20682914-20683012)
chr8 (26-103)||(21005959-21006037)
chr8 (17-62)||(36156359-36156404)
chr8 (16-64)||(16682573-16682621)
chr8 (17-64)||(9800344-9800391)
chr8 (17-64)||(12489528-12489574)
chr8 (26-103)||(10047653-10047731)
chr8 (26-103)||(44024400-44024478)
chr8 (27-103)||(11089133-11089210)
chr8 (7-64)||(26720363-26720420)
chr8 (17-64)||(6297504-6297551)
chr8 (17-64)||(13315244-13315291)
chr8 (17-64)||(16662210-16662257)
chr8 (17-64)||(17914239-17914286)
chr8 (7-62)||(21006113-21006168)
chr8 (23-62)||(45369129-45369168)
chr8 (18-64)||(9800081-9800127)
chr8 (7-64)||(26997860-26997917)
chr8 (16-53)||(34614070-34614106)
chr8 (18-62)||(4694434-4694478)
chr8 (26-54)||(6297687-6297715)
[»] chr5 (42 HSPs)
chr5 (1-103)||(3191800-3191902)
chr5 (1-103)||(5747177-5747279)
chr5 (1-103)||(6543417-6543519)
chr5 (1-103)||(21949402-21949504)
chr5 (1-103)||(39402630-39402732)
chr5 (6-103)||(3192221-3192318)
chr5 (6-103)||(39402214-39402311)
chr5 (1-103)||(28641577-28641679)
chr5 (1-103)||(31162423-31162525)
chr5 (13-103)||(3878774-3878865)
chr5 (5-103)||(119947-120046)
chr5 (15-103)||(31092997-31093086)
chr5 (6-103)||(31093417-31093514)
chr5 (15-103)||(31162851-31162939)
chr5 (15-103)||(28641163-28641251)
chr5 (5-103)||(718213-718312)
chr5 (5-103)||(19352301-19352400)
chr5 (6-103)||(3879194-3879291)
chr5 (15-103)||(5746763-5746851)
chr5 (7-103)||(14625124-14625220)
chr5 (15-103)||(21949830-21949918)
chr5 (5-103)||(119012-119111)
chr5 (7-103)||(19353060-19353157)
chr5 (5-62)||(19353227-19353284)
chr5 (15-103)||(6543845-6543932)
chr5 (17-103)||(4187837-4187924)
chr5 (18-64)||(119226-119272)
chr5 (7-64)||(119775-119832)
chr5 (7-103)||(4186756-4186853)
chr5 (15-64)||(19352513-19352562)
chr5 (16-62)||(14626089-14626135)
chr5 (7-64)||(87252-87309)
chr5 (7-64)||(8648056-8648113)
chr5 (7-103)||(18999368-18999465)
chr5 (26-62)||(3406695-3406731)
chr5 (17-103)||(18999641-18999728)
chr5 (27-69)||(18340661-18340703)
chr5 (7-64)||(31588337-31588394)
chr5 (16-64)||(30351704-30351752)
chr5 (26-60)||(8647360-8647394)
chr5 (7-64)||(30415475-30415531)
chr5 (7-64)||(37813417-37813474)
[»] chr2 (55 HSPs)
chr2 (1-103)||(39096942-39097044)
chr2 (1-103)||(1804648-1804750)
chr2 (1-103)||(6476089-6476191)
chr2 (1-103)||(11451172-11451274)
chr2 (1-103)||(27377651-27377753)
chr2 (6-103)||(39096526-39096623)
chr2 (13-103)||(3854068-3854159)
chr2 (13-103)||(12089696-12089787)
chr2 (12-103)||(26525464-26525555)
chr2 (6-103)||(3854488-3854585)
chr2 (6-103)||(12090116-12090213)
chr2 (15-103)||(1804234-1804322)
chr2 (15-103)||(6476517-6476605)
chr2 (1-103)||(34038237-34038339)
chr2 (6-103)||(26525885-26525982)
chr2 (5-103)||(10708025-10708124)
chr2 (13-103)||(22701518-22701605)
chr2 (6-103)||(34037811-34037908)
chr2 (7-103)||(39947077-39947174)
chr2 (15-103)||(11450758-11450846)
chr2 (15-103)||(27378079-27378167)
chr2 (5-103)||(39945844-39945943)
chr2 (7-64)||(10709517-10709574)
chr2 (5-103)||(44929985-44930084)
chr2 (9-103)||(44934676-44934771)
chr2 (17-103)||(23222864-23222951)
chr2 (5-98)||(18105723-18105817)
chr2 (7-64)||(2191259-2191316)
chr2 (5-62)||(10710991-10711048)
chr2 (7-64)||(18107416-18107473)
chr2 (7-103)||(23221836-23221933)
chr2 (5-103)||(38110397-38110492)
chr2 (26-103)||(32861050-32861128)
chr2 (7-64)||(2517455-2517512)
chr2 (7-64)||(10710821-10710878)
chr2 (17-64)||(21216965-21217012)
chr2 (17-64)||(21217322-21217369)
chr2 (17-64)||(21265033-21265080)
chr2 (17-64)||(21265390-21265437)
chr2 (26-103)||(24093331-24093409)
chr2 (7-64)||(2035650-2035707)
chr2 (7-64)||(3691380-3691437)
chr2 (28-64)||(3624925-3624961)
chr2 (28-64)||(21182349-21182385)
chr2 (55-103)||(22704424-22704472)
chr2 (20-64)||(24093198-24093242)
chr2 (17-64)||(2036604-2036651)
chr2 (17-64)||(3691125-3691172)
chr2 (17-64)||(7083564-7083611)
chr2 (16-53)||(22701945-22701982)
chr2 (7-64)||(24093547-24093604)
chr2 (17-62)||(32860858-32860903)
chr2 (7-64)||(39729597-39729654)
chr2 (28-64)||(32114483-32114519)
chr2 (7-70)||(38110020-38110084)
[»] scaffold0085 (2 HSPs)
scaffold0085 (1-103)||(39837-39939)
scaffold0085 (15-103)||(39423-39511)
[»] chr3 (45 HSPs)
chr3 (1-103)||(4199455-4199557)
chr3 (13-103)||(34950184-34950275)
chr3 (1-103)||(46689684-46689786)
chr3 (6-103)||(4199876-4199973)
chr3 (6-103)||(42606701-42606798)
chr3 (13-103)||(22406844-22406935)
chr3 (1-103)||(36899256-36899358)
chr3 (1-103)||(42606282-42606384)
chr3 (1-103)||(45539625-45539727)
chr3 (6-103)||(2389053-2389150)
chr3 (6-103)||(22407264-22407361)
chr3 (6-103)||(34949758-34949855)
chr3 (6-103)||(36899675-36899772)
chr3 (5-101)||(2388636-2388732)
chr3 (13-103)||(27475726-27475817)
chr3 (15-103)||(46690112-46690200)
chr3 (20-103)||(27475392-27475475)
chr3 (6-103)||(45539211-45539308)
chr3 (5-103)||(20831090-20831189)
chr3 (9-103)||(20826730-20826825)
chr3 (5-62)||(35300788-35300845)
chr3 (8-103)||(54588458-54588555)
chr3 (7-64)||(44504377-44504434)
chr3 (7-62)||(48867694-48867749)
chr3 (17-103)||(48868588-48868675)
chr3 (19-64)||(132062-132107)
chr3 (7-64)||(9217862-9217919)
chr3 (7-64)||(51755905-51755962)
chr3 (17-64)||(22814338-22814385)
chr3 (5-62)||(7248478-7248535)
chr3 (31-103)||(27013584-27013657)
chr3 (7-64)||(44504134-44504191)
chr3 (17-100)||(25770326-25770410)
chr3 (26-62)||(25770538-25770574)
chr3 (16-64)||(51587571-51587619)
chr3 (17-64)||(43933482-43933529)
chr3 (27-61)||(131948-131982)
chr3 (7-53)||(51471388-51471434)
chr3 (7-64)||(54589566-54589624)
chr3 (7-64)||(13637771-13637828)
chr3 (7-64)||(27013451-27013508)
chr3 (7-64)||(37172123-37172180)
chr3 (15-64)||(38485739-38485788)
chr3 (27-60)||(44504311-44504344)
chr3 (17-57)||(34743471-34743511)
[»] chr1 (41 HSPs)
chr1 (1-103)||(32266485-32266587)
chr1 (13-103)||(30427675-30427766)
chr1 (13-103)||(45230131-45230222)
chr1 (1-103)||(9122687-9122789)
chr1 (1-103)||(47410839-47410941)
chr1 (6-103)||(46802743-46802840)
chr1 (6-103)||(47410425-47410522)
chr1 (1-103)||(17968453-17968556)
chr1 (13-103)||(9123113-9123203)
chr1 (1-103)||(40124078-40124180)
chr1 (6-103)||(17968039-17968136)
chr1 (1-103)||(46802324-46802426)
chr1 (6-103)||(30428095-30428192)
chr1 (6-103)||(45230551-45230648)
chr1 (15-103)||(32266913-32267001)
chr1 (14-103)||(8997342-8997432)
chr1 (15-103)||(40124506-40124594)
chr1 (17-103)||(37717797-37717883)
chr1 (15-103)||(1500980-1501069)
chr1 (26-103)||(3591174-3591252)
chr1 (17-64)||(5172787-5172834)
chr1 (26-64)||(12869664-12869702)
chr1 (6-64)||(36793564-36793622)
chr1 (7-64)||(45664729-45664786)
chr1 (1-45)||(8998220-8998264)
chr1 (17-64)||(3591338-3591385)
chr1 (17-64)||(6751354-6751401)
chr1 (1-64)||(12868475-12868538)
chr1 (7-62)||(18179923-18179978)
chr1 (5-103)||(45665930-45666029)
chr1 (17-64)||(47541560-47541607)
chr1 (25-64)||(48155015-48155054)
chr1 (17-64)||(50359440-50359487)
chr1 (6-64)||(36792282-36792339)
chr1 (15-64)||(1500101-1500150)
chr1 (17-62)||(5683205-5683250)
chr1 (7-64)||(18180269-18180326)
chr1 (7-64)||(19895442-19895499)
chr1 (7-72)||(36297541-36297606)
chr1 (17-53)||(9880537-9880573)
chr1 (26-62)||(19895617-19895653)
[»] scaffold0148 (2 HSPs)
scaffold0148 (5-103)||(29276-29375)
scaffold0148 (5-103)||(32983-33082)
[»] scaffold0009 (3 HSPs)
scaffold0009 (27-103)||(107897-107974)
scaffold0009 (7-64)||(107764-107821)
scaffold0009 (7-53)||(108113-108159)


Alignment Details
Target: chr7 (Bit Score: 196; Significance: 1e-106; HSPs: 32)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 1 - 303
Target Start/End: Original strand, 29784364 - 29784664
Alignment:
Q  1 ttacgctaacggaggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactattctcaaaattgtacaaaacgtagggaccaaaaacatatt 100  Q
    |||||||||| ||||||||||||| |||||||||||| |||||||||||||||| ||||||||||||||| || ||||||||||||||||||||||||||    
T  29784364 ttacgctaacagaggaaaaatgtagggattttaaaaatatttattgaaatgtaaagactattctcaaaatcgtgcaaaacgtagggaccaaaaacatatt 29784463  T
Q  101 taagccgtgtttatataatcaaacagtataatttgnnnnnnnnnnnnnnnncaaggaaaccccagggtctaggcctaacatttcagtggcgtctttccct 200  Q
    ||| || |||||||||||  ||||| |||||||||                |||||||||||||||||||||||||||||||||||||||||||||||||    
T  29784464 taacccttgtttatataaataaacaatataatttgaaaagaaaagaaaaaacaaggaaaccccagggtctaggcctaacatttcagtggcgtctttccct 29784563  T
Q  201 tagtattgtttaaagatgtatgattcaaactaacatgtgacataaaaaatttgtagttagatagatatgagcaaacattaaagttaaccacgggagtagt 300  Q
    ||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  29784564 ta--attgtttaaagatgtatgattcaaactaacatgtgacataaaaaatttgtagttagatagatatgagcaaacattaaagttaaccgcgggagtagt 29784661  T
Q  301 ttt 303  Q
    |||    
T  29784662 ttt 29784664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 18443280 - 18443178
Alignment:
Q  1 ttacgctaacggaggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactattctcaaaattgtacaaaacgtagggaccaaaaacatatt 100  Q
    ||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| || ||||| ||||||||||||||||||||    
T  18443280 ttacgctaacggatgaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattctcaaaatcgtgcaaaatgtagggaccaaaaacatatt 18443181  T
Q  101 taa 103  Q
    |||    
T  18443180 taa 18443178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 13 - 103
Target Start/End: Complemental strand, 884775 - 884684
Alignment:
Q  13 aggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggact-attctcaaaattgtacaaaacgtagggaccaaaaacatatttaa 103  Q
    |||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||| || |||||||||||||||||||||||||||||    
T  884775 aggaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaa 884684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 13 - 103
Target Start/End: Complemental strand, 1244104 - 1244013
Alignment:
Q  13 aggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggact-attctcaaaattgtacaaaacgtagggaccaaaaacatatttaa 103  Q
    |||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||| || |||||||||||||||||||||||||||||    
T  1244104 aggaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaa 1244013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 13 - 103
Target Start/End: Original strand, 28898457 - 28898548
Alignment:
Q  13 aggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggact-attctcaaaattgtacaaaacgtagggaccaaaaacatatttaa 103  Q
    |||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||| || |||||||||||||||||||||||||||||    
T  28898457 aggaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaa 28898548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 13 - 103
Target Start/End: Complemental strand, 41298337 - 41298246
Alignment:
Q  13 aggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggact-attctcaaaattgtacaaaacgtagggaccaaaaacatatttaa 103  Q
    |||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||| || ||||| |||||||||||||||||||||||    
T  41298337 aggaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaatgtagggaccaaaaacatatttaa 41298246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 6 - 103
Target Start/End: Original strand, 1244433 - 1244530
Alignment:
Q  6 ctaacggaggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactattctcaaaattgtacaaaacgtagggaccaaaaacatatttaa 103  Q
    ||||||||| ||||||||| |||||||||||||||| ||||||||||| |||||||||||||||| |  ||||| |||||||||||||||||||||||    
T  1244433 ctaacggagaaaaaatgtagggattttaaaaacattcattgaaatgtagggactattctcaaaatcgcgcaaaatgtagggaccaaaaacatatttaa 1244530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 6 - 103
Target Start/End: Original strand, 18443599 - 18443696
Alignment:
Q  6 ctaacggaggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactattctcaaaattgtacaaaacgtagggaccaaaaacatatttaa 103  Q
    |||||||||||||||| || |||||||||||||||||||||||||||| |||||||||||||||| |  ||||| ||| |||||||||||||||||||    
T  18443599 ctaacggaggaaaaatatagggattttaaaaacatttattgaaatgtagggactattctcaaaatcgcgcaaaatgtaaggaccaaaaacatatttaa 18443696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 6 - 103
Target Start/End: Complemental strand, 28898128 - 28898031
Alignment:
Q  6 ctaacggaggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactattctcaaaattgtacaaaacgtagggaccaaaaacatatttaa 103  Q
    ||||||||| ||||||||| |||||||||||||||| ||||||||||| |||||||||||||||| |  ||||| |||||||||||||||||||||||    
T  28898128 ctaacggagaaaaaatgtagggattttaaaaacattcattgaaatgtagggactattctcaaaatcgcgcaaaatgtagggaccaaaaacatatttaa 28898031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 6 - 103
Target Start/End: Original strand, 41298666 - 41298763
Alignment:
Q  6 ctaacggaggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactattctcaaaattgtacaaaacgtagggaccaaaaacatatttaa 103  Q
    ||||||||| ||||||||| |||||||||||||||| ||||||||||| |||||||||||||||| |  ||||| |||||||||||||||||||||||    
T  41298666 ctaacggagaaaaaatgtagggattttaaaaacattcattgaaatgtagggactattctcaaaatcgcgcaaaatgtagggaccaaaaacatatttaa 41298763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 33847970 - 33847868
Alignment:
Q  1 ttacgctaacggaggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactattctcaaaattgtacaaaacgtagggaccaaaaacatatt 100  Q
    |||||||||||||| ||||||||| ||||||||||||||||||||||||||||  ||||||||||||||| |   ||||  |||||||||||||||||||    
T  33847970 ttacgctaacggagaaaaaatgtagggattttaaaaacatttattgaaatgtagagactattctcaaaatcgcgtaaaatatagggaccaaaaacatatt 33847871  T
Q  101 taa 103  Q
    |||    
T  33847870 taa 33847868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 6 - 103
Target Start/End: Complemental strand, 29784034 - 29783937
Alignment:
Q  6 ctaacggaggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactattctcaaaattgtacaaaacgtagggaccaaaaacatatttaa 103  Q
    ||||||||| ||||||||| | ||||||||||||||||||||||| || |||||||||||||||| | |||||| |||||||| ||||||||||||||    
T  29784034 ctaacggagaaaaaatgtaggaattttaaaaacatttattgaaatatagggactattctcaaaatcgcacaaaatgtagggactaaaaacatatttaa 29783937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 13 - 103
Target Start/End: Complemental strand, 22954138 - 22954048
Alignment:
Q  13 aggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactattctcaaaattgtacaaaacgtagggaccaaaaacatatttaa 103  Q
    |||||||||||| |||||||||||||||||||| ||||||| |||||||||||||||||| | ||||  ||||||| ||||||||||||||    
T  22954138 aggaaaaatgtagggattttaaaaacatttattaaaatgtagggactattctcaaaattgcataaaatatagggactaaaaacatatttaa 22954048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 6 - 103
Target Start/End: Original strand, 33848287 - 33848384
Alignment:
Q  6 ctaacggaggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactattctcaaaattgtacaaaacgtagggaccaaaaacatatttaa 103  Q
    |||||| | |||||||||| | |||||||||||||||||||||||||| |||||||||| ||||| |   |||| ||||||| |||||||||| ||||    
T  33848287 ctaacgaatgaaaaatgtaggaattttaaaaacatttattgaaatgtagggactattcttaaaatcgcgtaaaatgtagggaacaaaaacataattaa 33848384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 27 - 103
Target Start/End: Complemental strand, 28838604 - 28838527
Alignment:
Q  27 gattttaaaaacatttattgaaatgtaaggacta-ttctcaaaattgtacaaaacgtagggaccaaaaacatatttaa 103  Q
    ||||||||||||||||||| ||||||||||| || || |||||||  | ||||| |||||||||||||||||||||||    
T  28838604 gattttaaaaacatttattaaaatgtaaggattatttttcaaaatgatgcaaaatgtagggaccaaaaacatatttaa 28838527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 27 - 103
Target Start/End: Original strand, 20544321 - 20544398
Alignment:
Q  27 gattttaaaaacatttattgaaatgtaaggactattc-tcaaaattgtacaaaacgtagggaccaaaaacatatttaa 103  Q
    ||||||||||||||||| ||||||||||||||||||| ||||||  || |||||  || |||| ||||||||||||||    
T  20544321 gattttaaaaacatttaatgaaatgtaaggactattcttcaaaaaggtgcaaaatataaggactaaaaacatatttaa 20544398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 15 - 103
Target Start/End: Original strand, 30939563 - 30939652
Alignment:
Q  15 gaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactattct-caaaattgtacaaaacgtagggaccaaaaacatatttaa 103  Q
    |||||||||| |||||||||||| ||||| ||||||||| |||||||||| | |||| |   |||| |||||||| ||||||||||||||    
T  30939563 gaaaaatgtagggattttaaaaatatttaatgaaatgtagggactattcttcgaaatggcgtaaaatgtagggactaaaaacatatttaa 30939652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 17 - 64
Target Start/End: Original strand, 17075618 - 17075665
Alignment:
Q  17 aaaatgtaaggattttaaaaacatttattgaaatgtaaggactattct 64  Q
    ||||||| ||||||||||||||||||| ||||||||| ||||||||||    
T  17075618 aaaatgtgaggattttaaaaacatttaatgaaatgtagggactattct 17075665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 24 - 62
Target Start/End: Complemental strand, 10466697 - 10466659
Alignment:
Q  24 aaggattttaaaaacatttattgaaatgtaaggactatt 62  Q
    ||||||| |||||||||||||||||||||||||||||||    
T  10466697 aaggattataaaaacatttattgaaatgtaaggactatt 10466659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 26 - 103
Target Start/End: Original strand, 20544148 - 20544226
Alignment:
Q  26 ggattttaaaaacatttattgaaatgtaaggactatt-ctcaaaattgtacaaaacgtagggaccaaaaacatatttaa 103  Q
    |||||||||||||||||||||||||| ||||||||||  | ||| |    |||||| ||||||||||||||||||||||    
T  20544148 ggattttaaaaacatttattgaaatgcaaggactattgtttaaagtcacgcaaaacttagggaccaaaaacatatttaa 20544226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 7 - 64
Target Start/End: Original strand, 22948869 - 22948926
Alignment:
Q  7 taacggaggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactattct 64  Q
    ||||||||  ||||||| ||||||||||||||||||| |||||||||  |||||||||    
T  22948869 taacggagataaaatgtgaggattttaaaaacatttaatgaaatgtagagactattct 22948926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 15 - 64
Target Start/End: Complemental strand, 27310138 - 27310089
Alignment:
Q  15 gaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactattct 64  Q
    |||||||||| |||||||||||||||||| ||||||||| |||| |||||    
T  27310138 gaaaaatgtagggattttaaaaacatttaatgaaatgtagggaccattct 27310089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 7 - 64
Target Start/End: Original strand, 27311039 - 27311096
Alignment:
Q  7 taacggaggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactattct 64  Q
    |||||| | ||||||||| | |||||||||||||||| ||||||||| ||||||||||    
T  27311039 taacggtgaaaaaatgtaggaattttaaaaacatttaatgaaatgtagggactattct 27311096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 7 - 64
Target Start/End: Original strand, 42750109 - 42750166
Alignment:
Q  7 taacggaggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactattct 64  Q
    ||||||||  ||||||| |||||||||||||| |||| ||||||||| ||||||||||    
T  42750109 taacggagataaaatgtgaggattttaaaaacgtttaatgaaatgtagggactattct 42750166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 17 - 64
Target Start/End: Complemental strand, 17075308 - 17075261
Alignment:
Q  17 aaaatgtaaggattttaaaaacatttattgaaatgtaaggactattct 64  Q
    ||||||| |||||||||||||| |||| ||||||||| ||||||||||    
T  17075308 aaaatgtgaggattttaaaaacttttaatgaaatgtagggactattct 17075261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 17 - 64
Target Start/End: Complemental strand, 32092317 - 32092270
Alignment:
Q  17 aaaatgtaaggattttaaaaacatttattgaaatgtaaggactattct 64  Q
    ||||||| ||||||||||||||||||| ||||||| | ||||||||||    
T  32092317 aaaatgtgaggattttaaaaacatttaatgaaatgcagggactattct 32092270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 7 - 58
Target Start/End: Original strand, 32092520 - 32092571
Alignment:
Q  7 taacggaggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggac 58  Q
    ||||||||  ||||||| ||||||||||||||||||| ||||||||| ||||    
T  32092520 taacggagataaaatgtgaggattttaaaaacatttaatgaaatgtagggac 32092571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 62
Target Start/End: Complemental strand, 11974753 - 11974708
Alignment:
Q  17 aaaatgtaaggattttaaaaacatttattgaaatgtaaggactatt 62  Q
    ||||||| ||||||||||||||||||| |||||||||  |||||||    
T  11974753 aaaatgtgaggattttaaaaacatttaatgaaatgtacagactatt 11974708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 64
Target Start/End: Complemental strand, 20544010 - 20543953
Alignment:
Q  7 taacggaggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactattct 64  Q
    ||||||||  ||||| | ||||||||||||| ||||| ||||||||| ||||||||||    
T  20544010 taacggagataaaatatgaggattttaaaaaaatttaatgaaatgtagggactattct 20543953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 52
Target Start/End: Complemental strand, 28838451 - 28838406
Alignment:
Q  7 taacggaggaaaaatgtaaggattttaaaaacatttattgaaatgt 52  Q
    ||||||||  ||||||| ||||||||||||||||||| ||||||||    
T  28838451 taacggagataaaatgtgaggattttaaaaacatttaatgaaatgt 28838406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 62
Target Start/End: Complemental strand, 28852782 - 28852737
Alignment:
Q  17 aaaatgtaaggattttaaaaacatttattgaaatgtaaggactatt 62  Q
    ||||||| ||||||||||||||||||| ||||||||| ||| ||||    
T  28852782 aaaatgtgaggattttaaaaacatttaatgaaatgtagggagtatt 28852737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 64
Target Start/End: Original strand, 44803623 - 44803680
Alignment:
Q  7 taacggaggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactattct 64  Q
    ||||||||  ||||||| || |||||||||||||||| |||||||||  |||||||||    
T  44803623 taacggagataaaatgtgagaattttaaaaacatttaatgaaatgtagagactattct 44803680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 87; Significance: 1e-41; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 6162349 - 6162247
Alignment:
Q  1 ttacgctaacggaggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactattctcaaaattgtacaaaacgtagggaccaaaaacatatt 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||| |||||||||||    
T  6162349 ttacgctaacggaggaaaaatgtagggattttaaaaacatttattgaaatgtaatgactattctcaaaattgtgcaaaacgtagggacaaaaaacatatt 6162250  T
Q  101 taa 103  Q
    |||    
T  6162249 taa 6162247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 20824268 - 20824166
Alignment:
Q  1 ttacgctaacggaggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactattctcaaaattgtacaaaacgtagggaccaaaaacatatt 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||| ||  |||| ||||||||||||||||||||    
T  20824268 ttacgctaacggaggaaaaatgtagggattttaaaaacatttattgaaatgtagggactattctcaaaatcgtgtaaaatgtagggaccaaaaacatatt 20824169  T
Q  101 taa 103  Q
    |||    
T  20824168 taa 20824166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 13 - 103
Target Start/End: Complemental strand, 33107022 - 33106931
Alignment:
Q  13 aggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggact-attctcaaaattgtacaaaacgtagggaccaaaaacatatttaa 103  Q
    |||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||| || |||||||||||||||||||||||||||||    
T  33107022 aggaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaa 33106931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 14257251 - 14257149
Alignment:
Q  1 ttacgctaacggaggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactattctcaaaattgtacaaaacgtagggaccaaaaacatatt 100  Q
    |||||||||||||| ||||||||| |||||||||||||||||||||||||||| |||||||||||||||| |   |||| ||||||||||||||||||||    
T  14257251 ttacgctaacggagaaaaaatgtagggattttaaaaacatttattgaaatgtagggactattctcaaaatcgcgtaaaatgtagggaccaaaaacatatt 14257152  T
Q  101 taa 103  Q
    |||    
T  14257151 taa 14257149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 6 - 103
Target Start/End: Original strand, 14257568 - 14257665
Alignment:
Q  6 ctaacggaggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactattctcaaaattgtacaaaacgtagggaccaaaaacatatttaa 103  Q
    |||||| |||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||| | ||||  ||||||||||||||||||||||    
T  14257568 ctaacgaaggaaaaatgtagggattttaaaaacatttattgaaatgtagggactattctcaaaattgcataaaatatagggaccaaaaacatatttaa 14257665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 15147822 - 15147720
Alignment:
Q  1 ttacgctaacggaggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactattctcaaaattgtacaaaacgtagggaccaaaaacatatt 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||| ||| ||||||| |||| |   |||| ||||||||||||||||||||    
T  15147822 ttacgctaacggaggaaaaatgtagggattttaaaaacatttattgaaatgtagggattattctctaaatcgcgtaaaatgtagggaccaaaaacatatt 15147723  T
Q  101 taa 103  Q
    |||    
T  15147722 taa 15147720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 6 - 103
Target Start/End: Original strand, 6162678 - 6162775
Alignment:
Q  6 ctaacggaggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactattctcaaaattgtacaaaacgtagggaccaaaaacatatttaa 103  Q
    ||||||||| ||||||||| ||||||||||||||||||||||||||||  ||||||||||||||| |  ||||| |||||||||||||||||||||||    
T  6162678 ctaacggagaaaaaatgtagggattttaaaaacatttattgaaatgtagagactattctcaaaatcgcgcaaaatgtagggaccaaaaacatatttaa 6162775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 6 - 103
Target Start/End: Original strand, 33107351 - 33107448
Alignment:
Q  6 ctaacggaggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactattctcaaaattgtacaaaacgtagggaccaaaaacatatttaa 103  Q
    ||||||||| ||||||||| |||||||||||||||| ||||||||||| |||||||||||||||| |  ||||| |||||||||||||||||||||||    
T  33107351 ctaacggagaaaaaatgtagggattttaaaaacattcattgaaatgtagggactattctcaaaatcgcgcaaaatgtagggaccaaaaacatatttaa 33107448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 6 - 103
Target Start/End: Original strand, 34984535 - 34984631
Alignment:
Q  6 ctaacggaggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactattctcaaaattgtacaaaacgtagggaccaaaaacatatttaa 103  Q
    ||||||||| ||||||||| |||||||||||||||||||||||||||| |||||||||||||||| |  ||||| |||||||||||||||||||||||    
T  34984535 ctaacggagaaaaaatgta-ggattttaaaaacatttattgaaatgtagggactattctcaaaatcgcgcaaaatgtagggaccaaaaacatatttaa 34984631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 20228220 - 20228322
Alignment:
Q  1 ttacgctaacggaggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactattctcaaaattgtacaaaacgtagggaccaaaaacatatt 100  Q
    |||||||||| ||||||||||||| |||||||||||||||||||| ||||||| | |||||||||||||||||  |||  | ||||||||| ||||||||    
T  20228220 ttacgctaacagaggaaaaatgtagggattttaaaaacatttattaaaatgtaggaactattctcaaaattgtgaaaattgcagggaccaataacatatt 20228319  T
Q  101 taa 103  Q
    |||    
T  20228320 taa 20228322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 22122204 - 22122306
Alignment:
Q  1 ttacgctaacggaggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactattctcaaaattgtacaaaacgtagggaccaaaaacatatt 100  Q
    |||||||||| ||||||||||||| |||||||||||||||||||| ||||||| | |||||||||||||||||  |||  | ||||||||| ||||||||    
T  22122204 ttacgctaacagaggaaaaatgtagggattttaaaaacatttattaaaatgtaggaactattctcaaaattgtgaaaattgcagggaccaataacatatt 22122303  T
Q  101 taa 103  Q
    |||    
T  22122304 taa 22122306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 15 - 103
Target Start/End: Original strand, 20824594 - 20824682
Alignment:
Q  15 gaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactattctcaaaattgtacaaaacgtagggaccaaaaacatatttaa 103  Q
    |||||||||| |||||||||||||||||||||||||||| ||| |||||||||||| |   |||| |||||||||||||||||||||||    
T  20824594 gaaaaatgtagggattttaaaaacatttattgaaatgtagggattattctcaaaatcgcgtaaaatgtagggaccaaaaacatatttaa 20824682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 8 - 103
Target Start/End: Original strand, 15148141 - 15148236
Alignment:
Q  8 aacggaggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactattctcaaaattgtacaaaacgtagggaccaaaaacatatttaa 103  Q
    |||| |||||||||||| ||||||||||| |||||||||||||||| |||||||| |||||||||   ||||  ||||||||||||||||||||||    
T  15148141 aacgaaggaaaaatgtagggattttaaaatcatttattgaaatgtagggactattatcaaaattgcgtaaaatatagggaccaaaaacatatttaa 15148236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 8 - 103
Target Start/End: Original strand, 20522148 - 20522243
Alignment:
Q  8 aacggaggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactattc-tcaaaattgtacaaaacgtagggaccaaaaacatatttaa 103  Q
    |||||||| ||||||||  ||||||||||||||||||||||||||| ||||||||| ||||||| || ||||| ||||| |||||||||||||||||    
T  20522148 aacggaggtaaaatgtagtgattttaaaaacatttattgaaatgtagggactattcttcaaaatcgt-caaaatgtaggaaccaaaaacatatttaa 20522243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 26 - 103
Target Start/End: Complemental strand, 14712910 - 14712832
Alignment:
Q  26 ggattttaaaaacatttattgaaatgtaaggacta-ttctcaaaattgtacaaaacgtagggaccaaaaacatatttaa 103  Q
    ||||||||||||||||||||||||||||||||||| || ||||| |    ||||| |||||||||||||||||||||||    
T  14712910 ggattttaaaaacatttattgaaatgtaaggactatttttcaaagtgacgcaaaatgtagggaccaaaaacatatttaa 14712832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 7 - 103
Target Start/End: Original strand, 7645973 - 7646070
Alignment:
Q  7 taacggaggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactattc-tcaaaattgtacaaaacgtagggaccaaaaacatatttaa 103  Q
    ||||||||  ||||||| || ||||| |||||||||||||||||||||||||||||| |||||   | |||||| ||| |||| ||||||||||||||    
T  7645973 taacggagataaaatgtgagaatttttaaaacatttattgaaatgtaaggactattcttcaaaggagcacaaaatgtaaggactaaaaacatatttaa 7646070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 7 - 64
Target Start/End: Complemental strand, 20521284 - 20521227
Alignment:
Q  7 taacggaggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactattct 64  Q
    ||||||||||||| |||| ||||||||||||||||| ||||||| || ||||||||||    
T  20521284 taacggaggaaaattgtagggattttaaaaacattttttgaaatatagggactattct 20521227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 17 - 64
Target Start/End: Original strand, 8710341 - 8710388
Alignment:
Q  17 aaaatgtaaggattttaaaaacatttattgaaatgtaaggactattct 64  Q
    |||||||  |||||||||||||||||| ||||||||||||||||||||    
T  8710341 aaaatgtggggattttaaaaacatttaatgaaatgtaaggactattct 8710388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 103
Target Start/End: Complemental strand, 20227155 - 20227059
Alignment:
Q  7 taacggaggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactattctcaaaattgtacaaaacgtagggaccaaaaacatatttaa 103  Q
    |||||||| |||||| || | |||||||||| |||||||||||| || | |||||||||||||| |  |||||  ||| || |||||| ||||||||    
T  20227155 taacggagaaaaaatataggaattttaaaaatatttattgaaatataggaactattctcaaaatcgcgcaaaatatagagagcaaaaatatatttaa 20227059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 103
Target Start/End: Complemental strand, 22121139 - 22121043
Alignment:
Q  7 taacggaggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactattctcaaaattgtacaaaacgtagggaccaaaaacatatttaa 103  Q
    |||||||| |||||| || | |||||||||| |||||||||||| || | |||||||||||||| |  |||||  ||| || |||||| ||||||||    
T  22121139 taacggagaaaaaatataggaattttaaaaatatttattgaaatataggaactattctcaaaatcgcgcaaaatatagagagcaaaaatatatttaa 22121043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 17 - 64
Target Start/End: Complemental strand, 211530 - 211483
Alignment:
Q  17 aaaatgtaaggattttaaaaacatttattgaaatgtaaggactattct 64  Q
    ||||||| |||||||||||| |||||| ||||||||| ||||||||||    
T  211530 aaaatgtgaggattttaaaatcatttaatgaaatgtacggactattct 211483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 25 - 64
Target Start/End: Complemental strand, 4510269 - 4510230
Alignment:
Q  25 aggattttaaaaacatttattgaaatgtaaggactattct 64  Q
    ||||||||||||||||||| ||||||||| ||||||||||    
T  4510269 aggattttaaaaacatttaatgaaatgtagggactattct 4510230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 17 - 64
Target Start/End: Complemental strand, 5974100 - 5974053
Alignment:
Q  17 aaaatgtaaggattttaaaaacatttattgaaatgtaaggactattct 64  Q
    |||||||  |||||||||||||||||| ||||||||| ||||||||||    
T  5974100 aaaatgtggggattttaaaaacatttaatgaaatgtagggactattct 5974053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 17 - 64
Target Start/End: Complemental strand, 17157635 - 17157588
Alignment:
Q  17 aaaatgtaaggattttaaaaacatttattgaaatgtaaggactattct 64  Q
    ||||||| ||||||||||||| ||||| ||||||||| ||||||||||    
T  17157635 aaaatgtgaggattttaaaaatatttaatgaaatgtatggactattct 17157588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 17 - 64
Target Start/End: Original strand, 19595650 - 19595697
Alignment:
Q  17 aaaatgtaaggattttaaaaacatttattgaaatgtaaggactattct 64  Q
    ||||| || |||||||||||| ||||||||||||||| ||||||||||    
T  19595650 aaaatatagggattttaaaaatatttattgaaatgtagggactattct 19595697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 53
Target Start/End: Complemental strand, 1869550 - 1869504
Alignment:
Q  7 taacggaggaaaaatgtaaggattttaaaaacatttattgaaatgta 53  Q
    ||||||||  ||||||| ||||||||||||||||||| |||||||||    
T  1869550 taacggagataaaatgtgaggattttaaaaacatttaatgaaatgta 1869504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 30 - 103
Target Start/End: Original strand, 17157787 - 17157861
Alignment:
Q  30 tttaaaaacatttattgaaatgtaaggactattct-caaaattgtacaaaacgtagggaccaaaaacatatttaa 103  Q
    ||||||| |||||||| |||||||  ||||||||| |||| ||   ||||| |||||||||||||||||||||||    
T  17157787 tttaaaatcatttattaaaatgtacagactattcttcaaagttacgcaaaatgtagggaccaaaaacatatttaa 17157861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 62
Target Start/End: Original strand, 8709604 - 8709640
Alignment:
Q  26 ggattttaaaaacatttattgaaatgtaaggactatt 62  Q
    |||||||||||||| ||||| ||||||||||||||||    
T  8709604 ggattttaaaaacagttattaaaatgtaaggactatt 8709640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 87; Significance: 1e-41; HSPs: 61)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 28505313 - 28505211
Alignment:
Q  1 ttacgctaacggaggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactattctcaaaattgtacaaaacgtagggaccaaaaacatatt 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| || ||||| ||||||||||||||||||||    
T  28505313 ttacgctaacggaggaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattctcaaaatcgtgcaaaatgtagggaccaaaaacatatt 28505214  T
Q  101 taa 103  Q
    |||    
T  28505213 taa 28505211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 21235132 - 21235030
Alignment:
Q  1 ttacgctaacggaggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactattctcaaaattgtacaaaacgtagggaccaaaaacatatt 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||| || ||||| ||||||||||||||||||||    
T  21235132 ttacgctaacggaggaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattatcaaaatcgtgcaaaatgtagggaccaaaaacatatt 21235033  T
Q  101 taa 103  Q
    |||    
T  21235032 taa 21235030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 28957727 - 28957829
Alignment:
Q  1 ttacgctaacggaggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactattctcaaaattgtacaaaacgtagggaccaaaaacatatt 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||| |   |||| ||||||||||||||||||||    
T  28957727 ttacgctaacggaggaaaaatgtagggattttaaaaacatttattgaaatgtagggactattctcaaaatcgcgtaaaatgtagggaccaaaaacatatt 28957826  T
Q  101 taa 103  Q
    |||    
T  28957827 taa 28957829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 38026092 - 38026194
Alignment:
Q  1 ttacgctaacggaggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactattctcaaaattgtacaaaacgtagggaccaaaaacatatt 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||   |||| ||||| ||||||||||||||    
T  38026092 ttacgctaacggaggaaaaatgtagggattttaaaaacatttattgaaatgtagggactattctcaaaattgcgtaaaatgtaggaaccaaaaacatatt 38026191  T
Q  101 taa 103  Q
    |||    
T  38026192 taa 38026194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 6 - 103
Target Start/End: Complemental strand, 12922741 - 12922644
Alignment:
Q  6 ctaacggaggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactattctcaaaattgtacaaaacgtagggaccaaaaacatatttaa 103  Q
    ||||||||| ||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||  ||||| |||||||||||||||||||||||    
T  12922741 ctaacggagaaaaaatgtagggattttaaaaacatttattgaaatgtagggactattctcaaaattgcgcaaaatgtagggaccaaaaacatatttaa 12922644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 13 - 103
Target Start/End: Complemental strand, 1317153 - 1317062
Alignment:
Q  13 aggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggact-attctcaaaattgtacaaaacgtagggaccaaaaacatatttaa 103  Q
    |||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||| || |||||||||||||||||||||||||||||    
T  1317153 aggaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaa 1317062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 13 - 103
Target Start/End: Complemental strand, 30545806 - 30545715
Alignment:
Q  13 aggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggact-attctcaaaattgtacaaaacgtagggaccaaaaacatatttaa 103  Q
    |||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||| || |||||||||||||||||||||||||||||    
T  30545806 aggaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaa 30545715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 13 - 103
Target Start/End: Original strand, 46263063 - 46263154
Alignment:
Q  13 aggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggact-attctcaaaattgtacaaaacgtagggaccaaaaacatatttaa 103  Q
    |||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||| || |||||||||||||||||||||||||||||    
T  46263063 aggaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaa 46263154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 2669423 - 2669525
Alignment:
Q  1 ttacgctaacggaggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactattctcaaaattgtacaaaacgtagggaccaaaaacatatt 100  Q
    |||||||||||||| ||||||||| |||||||||||||||||||||||||||| |||||||||||||||| |   |||| ||||||||||||||||||||    
T  2669423 ttacgctaacggagaaaaaatgtagggattttaaaaacatttattgaaatgtagggactattctcaaaatcgcgtaaaatgtagggaccaaaaacatatt 2669522  T
Q  101 taa 103  Q
    |||    
T  2669523 taa 2669525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 13 - 100
Target Start/End: Original strand, 12923070 - 12923158
Alignment:
Q  13 aggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggact-attctcaaaattgtacaaaacgtagggaccaaaaacatatt 100  Q
    |||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||| |||||||| ||||||||||||||||||||    
T  12923070 aggaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtacaaaatgtagggaccaaaaacatatt 12923158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 13 - 103
Target Start/End: Complemental strand, 43979650 - 43979559
Alignment:
Q  13 aggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggact-attctcaaaattgtacaaaacgtagggaccaaaaacatatttaa 103  Q
    |||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||| || |||||| ||||||||||||||||||||||    
T  43979650 aggaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacatagggaccaaaaacatatttaa 43979559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 31228295 - 31228397
Alignment:
Q  1 ttacgctaacggaggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactattctcaaaattgtacaaaacgtagggaccaaaaacatatt 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||| | |||||||||||||| |   |||| ||||||| ||||||||||||    
T  31228295 ttacgctaacggaggaaaaatgtagggattttaaaaacatttattgaaatgtaggaactattctcaaaatcgcgtaaaatgtagggatcaaaaacatatt 31228394  T
Q  101 taa 103  Q
    |||    
T  31228395 taa 31228397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 40841566 - 40841464
Alignment:
Q  1 ttacgctaacggaggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactattctcaaaattgtacaaaacgtagggaccaaaaacatatt 100  Q
    |||||||||||||| ||||||||| |||||||||||||||||||||||||||| |||||||||| ||||| |   |||| ||||||||||||||||||||    
T  40841566 ttacgctaacggagaaaaaatgtagggattttaaaaacatttattgaaatgtagggactattcttaaaatcgcgtaaaatgtagggaccaaaaacatatt 40841467  T
Q  101 taa 103  Q
    |||    
T  40841466 taa 40841464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 55347665 - 55347563
Alignment:
Q  1 ttacgctaacggaggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactattctcaaaattgtacaaaacgtagggaccaaaaacatatt 100  Q
    ||||||||| |||||||||||||| |||||||||||||||||||| ||||||| ||||||||||||||||||   |||| |||||||||||||| |||||    
T  55347665 ttacgctaatggaggaaaaatgtagggattttaaaaacatttattaaaatgtagggactattctcaaaattgcgtaaaatgtagggaccaaaaatatatt 55347566  T
Q  101 taa 103  Q
    |||    
T  55347565 taa 55347563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 6 - 103
Target Start/End: Complemental strand, 789994 - 789897
Alignment:
Q  6 ctaacggaggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactattctcaaaattgtacaaaacgtagggaccaaaaacatatttaa 103  Q
    ||||||||| ||||||||| |||||||||||||||| ||||||||||| |||||||| |||||||||  ||||| |||||||||||||||||||||||    
T  789994 ctaacggagaaaaaatgtagggattttaaaaacattcattgaaatgtatggactattttcaaaattgcgcaaaatgtagggaccaaaaacatatttaa 789897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 6 - 103
Target Start/End: Complemental strand, 2669106 - 2669009
Alignment:
Q  6 ctaacggaggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactattctcaaaattgtacaaaacgtagggaccaaaaacatatttaa 103  Q
    |||||| |||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||| | ||||  || |||||||||||||||||||    
T  2669106 ctaacgaaggaaaaatgtagggattttaaaaacatttattgaaatgtagggactattctcaaaattgcataaaatataaggaccaaaaacatatttaa 2669009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 6 - 103
Target Start/End: Original strand, 43979979 - 43980076
Alignment:
Q  6 ctaacggaggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactattctcaaaattgtacaaaacgtagggaccaaaaacatatttaa 103  Q
    ||||||||| ||||||||| |||||||||||||||| ||||||||||| |||||||||||||||| |  ||||| |||||||||||||||||||||||    
T  43979979 ctaacggagaaaaaatgtagggattttaaaaacattcattgaaatgtagggactattctcaaaatcgcgcaaaatgtagggaccaaaaacatatttaa 43980076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 13 - 103
Target Start/End: Original strand, 790323 - 790414
Alignment:
Q  13 aggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggact-attctcaaaattgtacaaaacgtagggaccaaaaacatatttaa 103  Q
    |||||||||||| | |||||||||||||||||||||||||||||||| ||||||||||| || |||||| ||||||||||||||||||||||    
T  790323 aggaaaaatgtaggaattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacttagggaccaaaaacatatttaa 790414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 12108274 - 12108376
Alignment:
Q  1 ttacgctaacggaggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactattctcaaaattgtacaaaacgtagggaccaaaaacatatt 100  Q
    |||| ||||| ||| ||||||||| |||||||||||||||||||||||||||| |||||||||||||||| ||| ||||  |||||||||| ||||||||    
T  12108274 ttacactaacagagaaaaaatgtagggattttaaaaacatttattgaaatgtagggactattctcaaaatcgtataaaatttagggaccaataacatatt 12108373  T
Q  101 taa 103  Q
    |||    
T  12108374 taa 12108376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 6 - 103
Target Start/End: Original strand, 21235451 - 21235547
Alignment:
Q  6 ctaacggaggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactattctcaaaattgtacaaaacgtagggaccaaaaacatatttaa 103  Q
    |||||||||||||||||||  ||||||||||||||||||||||||||| |||||||| ||||||| || ||||| |||||||  ||||||||||||||    
T  21235451 ctaacggaggaaaaatgtagagattttaaaaacatttattgaaatgtagggactattatcaaaatcgtgcaaaatgtaggga-gaaaaacatatttaa 21235547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 6 - 103
Target Start/End: Original strand, 30546136 - 30546233
Alignment:
Q  6 ctaacggaggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactattctcaaaattgtacaaaacgtagggaccaaaaacatatttaa 103  Q
    ||||||||| ||||||||| |||||||||||| ||| |||||||||||  ||||||||||||||| |  ||||| |||||||||||||||||||||||    
T  30546136 ctaacggagaaaaaatgtagggattttaaaaatattcattgaaatgtagagactattctcaaaatcgcgcaaaatgtagggaccaaaaacatatttaa 30546233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 6 - 103
Target Start/End: Complemental strand, 38025775 - 38025678
Alignment:
Q  6 ctaacggaggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactattctcaaaattgtacaaaacgtagggaccaaaaacatatttaa 103  Q
    |||||| |||||||||||| |||||||||||   |||||||||||||||||||||||||||||||||   |||| |||||||||||| ||||||||||    
T  38025775 ctaacgaaggaaaaatgtagggattttaaaattttttattgaaatgtaaggactattctcaaaattgcgtaaaatgtagggaccaaagacatatttaa 38025678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 6 - 103
Target Start/End: Complemental strand, 46262734 - 46262637
Alignment:
Q  6 ctaacggaggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactattctcaaaattgtacaaaacgtagggaccaaaaacatatttaa 103  Q
    ||||||||| |||||||||   |||||||||||||| ||||||||||| |||||||| |||||||||  ||||| |||||||||||||||||||||||    
T  46262734 ctaacggagaaaaaatgtagaaattttaaaaacattcattgaaatgtagggactattttcaaaattgcgcaaaatgtagggaccaaaaacatatttaa 46262637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 15 - 103
Target Start/End: Complemental strand, 28957401 - 28957313
Alignment:
Q  15 gaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactattctcaaaattgtacaaaacgtagggaccaaaaacatatttaa 103  Q
    |||||||||| |||||||||||||||||||||||||||| ||| |||||||||||| |   |||| |||||||||||||||||||||||    
T  28957401 gaaaaatgtagggattttaaaaacatttattgaaatgtagggattattctcaaaatcgcgtaaaatgtagggaccaaaaacatatttaa 28957313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 15 - 103
Target Start/End: Complemental strand, 31227969 - 31227881
Alignment:
Q  15 gaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactattctcaaaattgtacaaaacgtagggaccaaaaacatatttaa 103  Q
    |||||||||| |||||||||||||||||||||||||||| ||| |||||||||||| |   |||| |||||||||||||||||||||||    
T  31227969 gaaaaatgtagggattttaaaaacatttattgaaatgtagggattattctcaaaatcgcgtaaaatgtagggaccaaaaacatatttaa 31227881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 6 - 103
Target Start/End: Original strand, 40841883 - 40841980
Alignment:
Q  6 ctaacggaggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactattctcaaaattgtacaaaacgtagggaccaaaaacatatttaa 103  Q
    |||||| | |||||||||| |||||||||||||||||||||||||||| |||||||||| ||||| |   |||| |||||||||||||||||| ||||    
T  40841883 ctaacgaatgaaaaatgtagggattttaaaaacatttattgaaatgtagggactattcttaaaatcgcgtaaaatgtagggaccaaaaacataattaa 40841980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 5 - 103
Target Start/End: Complemental strand, 47053862 - 47053763
Alignment:
Q  5 gctaacggaggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactatt-ctcaaaattgtacaaaacgtagggaccaaaaacatatttaa 103  Q
    ||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||  | |||||    ||||| ||||||||||| |||||||||||    
T  47053862 gctaacggatgaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgtagggaccaataacatatttaa 47053763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 6 - 103
Target Start/End: Complemental strand, 54142425 - 54142327
Alignment:
Q  6 ctaacggaggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactattc-tcaaaattgtacaaaacgtagggaccaaaaacatatttaa 103  Q
    |||||||||  ||||||||||||||||||||||||||||||||||||| ||||||||| ||||| | |  ||||| |||||||| || |||||||||||    
T  54142425 ctaacggagagaaaatgtaaggattttaaaaacatttattgaaatgtatggactattcttcaaagtcgcgcaaaatgtagggactaataacatatttaa 54142327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 6 - 103
Target Start/End: Original strand, 1317482 - 1317579
Alignment:
Q  6 ctaacggaggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactattctcaaaattgtacaaaacgtagggaccaaaaacatatttaa 103  Q
    ||||||||| | ||||||| | |||||||||||||| ||||||||||| |||||||| ||||||| |  ||||| ||||| |||||||||||||||||    
T  1317482 ctaacggagaagaaatgtaggaattttaaaaacattcattgaaatgtagggactattttcaaaatcgcgcaaaatgtaggaaccaaaaacatatttaa 1317579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 5 - 103
Target Start/End: Original strand, 47058496 - 47058595
Alignment:
Q  5 gctaacggaggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactatt-ctcaaaattgtacaaaacgtagggaccaaaaacatatttaa 103  Q
    |||||||||  ||||||||| ||||||||||||||||||||||||||||| |||||||  | |||||    ||||| |||||||||||||||||||||||    
T  47058496 gctaacggataaaaaatgtagggattttaaaaacatttattgaaatgtaaagactattaattaaaatgaggcaaaatgtagggaccaaaaacatatttaa 47058595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 6 - 64
Target Start/End: Complemental strand, 54167594 - 54167536
Alignment:
Q  6 ctaacggaggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactattct 64  Q
    ||||||||| ||||||||| ||||||||||||||||||||||||| |||||||||||||    
T  54167594 ctaacggagtaaaaatgtagggattttaaaaacatttattgaaatataaggactattct 54167536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 7 - 103
Target Start/End: Original strand, 49426343 - 49426440
Alignment:
Q  7 taacggaggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactatt-ctcaaaattgtacaaaacgtagggaccaaaaacatatttaa 103  Q
    ||||||| | ||||||||||||||||||||| ||||||||||||||||||||||||  | ||| | |  ||||| |||||||| ||||||||||||||    
T  49426343 taacggaagtaaaatgtaaggattttaaaaatatttattgaaatgtaaggactattatttaaagtagagcaaaatgtagggacaaaaaacatatttaa 49426440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 7 - 103
Target Start/End: Original strand, 54143492 - 54143589
Alignment:
Q  7 taacggaggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactattc-tcaaaattgtacaaaacgtagggaccaaaaacatatttaa 103  Q
    ||||||||  ||||||||||||||||||||||||||||| ||||||| ||||||||| ||||| | || |||||  ||||||| || |||||||||||    
T  54143492 taacggagagaaaatgtaaggattttaaaaacatttattaaaatgtagggactattcttcaaagtcgtgcaaaatatagggactaataacatatttaa 54143589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 17 - 98
Target Start/End: Original strand, 55347970 - 55348051
Alignment:
Q  17 aaaatgtaaggattttaaaaacatttattgaaatgtaaggactattctcaaaattgtacaaaacgtagggaccaaaaacata 98  Q
    |||||||| |||||||||||||||||||||||||||| |||||||||| ||||| |   |||| || |||||||||||||||    
T  55347970 aaaatgtagggattttaaaaacatttattgaaatgtagggactattcttaaaatcgcgtaaaatgttgggaccaaaaacata 55348051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 17 - 103
Target Start/End: Complemental strand, 12107794 - 12107708
Alignment:
Q  17 aaaatgtaaggattttaaaaacatttattgaaatgtaaggactattctcaaaattgtacaaaacgtagggaccaaaaacatatttaa 103  Q
    |||||||| |||||||| ||||||||||| ||||||| | | |||||||||||| |   |||| |||||||||||||||||||||||    
T  12107794 aaaatgtagggattttagaaacatttattaaaatgtaggtattattctcaaaatcgcgtaaaatgtagggaccaaaaacatatttaa 12107708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 17 - 103
Target Start/End: Original strand, 17288374 - 17288461
Alignment:
Q  17 aaaatgtaaggattttaaaaacatttattgaaatgtaaggactatt-ctcaaaattgtacaaaacgtagggaccaaaaacatatttaa 103  Q
    |||||||| |||||||||||||||||||||||||||| ||||||||  ||||| | |  ||||| |||||||| || |||||||||||    
T  17288374 aaaatgtagggattttaaaaacatttattgaaatgtagggactattattcaaagtagcgcaaaatgtagggactaataacatatttaa 17288461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 30 - 103
Target Start/End: Original strand, 1791389 - 1791463
Alignment:
Q  30 tttaaaaacatttattgaaatgtaaggacta-ttctcaaaattgtacaaaacgtagggaccaaaaacatatttaa 103  Q
    ||||||||||||||||||||||||||||||| || ||||| |    |||||||||||| ||||||||||||||||    
T  1791389 tttaaaaacatttattgaaatgtaaggactatttttcaaagtcacgcaaaacgtaggggccaaaaacatatttaa 1791463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 26 - 103
Target Start/End: Complemental strand, 10580120 - 10580042
Alignment:
Q  26 ggattttaaaaacatttattgaaatgtaaggacta-ttctcaaaattgtacaaaacgtagggaccaaaaacatatttaa 103  Q
    ||||||||||||||||||||||||||||||||||| || ||||| |    ||||| ||| |||||||||||||||||||    
T  10580120 ggattttaaaaacatttattgaaatgtaaggactatttttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 10580042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 23 - 103
Target Start/End: Complemental strand, 26168248 - 26168167
Alignment:
Q  23 taaggattttaaaaacatttattgaaatgtaaggactattctcaaaattgta---caaaacgtagggaccaaaaacatatttaa 103  Q
    ||||||||||||||||||||||||||||| |||||||||| || |||  |||   ||||| ||||||| |||||||||||||||    
T  26168248 taaggattttaaaaacatttattgaaatgcaaggactattttctaaa--gtaacgcaaaatgtagggatcaaaaacatatttaa 26168167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 30 - 103
Target Start/End: Original strand, 35166708 - 35166782
Alignment:
Q  30 tttaaaaacatttattgaaatgtaaggactattc-tcaaaattgtacaaaacgtagggaccaaaaacatatttaa 103  Q
    |||||||||||||||| ||||||||||||||||| ||||| | ||| |||| |||||||| ||| ||||||||||    
T  35166708 tttaaaaacatttattaaaatgtaaggactattcttcaaagtcgtataaaatgtagggacgaaagacatatttaa 35166782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 7 - 64
Target Start/End: Original strand, 3296935 - 3296992
Alignment:
Q  7 taacggaggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactattct 64  Q
    ||||||||  ||||||||||||||||||||||||||| ||||| ||| ||||||||||    
T  3296935 taacggagataaaatgtaaggattttaaaaacatttaatgaaacgtagggactattct 3296992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 7 - 64
Target Start/End: Complemental strand, 29691624 - 29691567
Alignment:
Q  7 taacggaggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactattct 64  Q
    ||||||||  ||||||| ||||||||||||||||||| ||||||||| ||||||||||    
T  29691624 taacggagataaaatgtgaggattttaaaaacatttaatgaaatgtagggactattct 29691567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 7 - 62
Target Start/End: Complemental strand, 17287586 - 17287531
Alignment:
Q  7 taacggaggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactatt 62  Q
    ||||||| | |||||||| | |||||||||| ||||||||||||||||||||||||    
T  17287586 taacggaagtaaaatgtaggaattttaaaaatatttattgaaatgtaaggactatt 17287531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 60
Target Start/End: Original strand, 28505634 - 28505685
Alignment:
Q  9 acggaggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggacta 60  Q
    ||||||||||||| || |||||||||||||||||||| ||||||| ||||||    
T  28505634 acggaggaaaaatatagggattttaaaaacatttattaaaatgtagggacta 28505685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 7 - 62
Target Start/End: Complemental strand, 49424553 - 49424498
Alignment:
Q  7 taacggaggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactatt 62  Q
    ||||||| | |||||||| |||||||||||||||||||||| |||||| |||||||    
T  49424553 taacggaagtaaaatgtagggattttaaaaacatttattgatatgtaaagactatt 49424498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 7 - 64
Target Start/End: Complemental strand, 3296642 - 3296585
Alignment:
Q  7 taacggaggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactattct 64  Q
    ||||||||  ||||||| ||||||||||||||||||| ||||||||| ||| ||||||    
T  3296642 taacggagataaaatgtgaggattttaaaaacatttaatgaaatgtagggaatattct 3296585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 7 - 64
Target Start/End: Original strand, 51906810 - 51906867
Alignment:
Q  7 taacggaggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactattct 64  Q
    ||||||||  ||||||| ||||||||||||||||||| ||| ||||| ||||||||||    
T  51906810 taacggagataaaatgtgaggattttaaaaacatttaatgagatgtagggactattct 51906867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 62
Target Start/End: Original strand, 29691749 - 29691785
Alignment:
Q  26 ggattttaaaaacatttattgaaatgtaaggactatt 62  Q
    ||||||||||||||||||||||||||||| |||||||    
T  29691749 ggattttaaaaacatttattgaaatgtaaagactatt 29691785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 17 - 64
Target Start/End: Original strand, 30953002 - 30953049
Alignment:
Q  17 aaaatgtaaggattttaaaaacatttattgaaatgtaaggactattct 64  Q
    ||||||| ||||||||||||||||||| ||||||||| |||| |||||    
T  30953002 aaaatgttaggattttaaaaacatttaatgaaatgtagggaccattct 30953049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 17 - 64
Target Start/End: Original strand, 34129301 - 34129348
Alignment:
Q  17 aaaatgtaaggattttaaaaacatttattgaaatgtaaggactattct 64  Q
    ||||||| ||||||||||||| ||||| ||||||||| ||||||||||    
T  34129301 aaaatgtgaggattttaaaaatatttaatgaaatgtagggactattct 34129348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 30 - 64
Target Start/End: Complemental strand, 3296793 - 3296759
Alignment:
Q  30 tttaaaaacatttattgaaatgtaaggactattct 64  Q
    |||||||||||||||| ||||||||||||||||||    
T  3296793 tttaaaaacatttattaaaatgtaaggactattct 3296759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 28 - 62
Target Start/End: Original strand, 5545023 - 5545057
Alignment:
Q  28 attttaaaaacatttattgaaatgtaaggactatt 62  Q
    |||||||||||||||||||||||||||| ||||||    
T  5545023 attttaaaaacatttattgaaatgtaagaactatt 5545057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 103
Target Start/End: Original strand, 7118003 - 7118080
Alignment:
Q  26 ggattttaaaaacatttattgaaatgtaaggacta-ttctcaaaattgtacaaaacgtagggaccaaaaacatatttaa 103  Q
    ||||||||||||||| ||||||||| ||||||||| || ||||| | |  ||||| ||| |||||||||||||||||||    
T  7118003 ggattttaaaaacatgtattgaaatttaaggactatttttcaaagtcgcgcaaaatgta-ggaccaaaaacatatttaa 7118080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 64
Target Start/End: Complemental strand, 30608344 - 30608287
Alignment:
Q  7 taacggaggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactattct 64  Q
    ||||||||  ||||||| ||||||||||||| || || ||||||||| ||||||||||    
T  30608344 taacggagataaaatgtgaggattttaaaaatatataatgaaatgtagggactattct 30608287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 64
Target Start/End: Original strand, 30608624 - 30608681
Alignment:
Q  7 taacggaggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactattct 64  Q
    ||||||||  ||||||| ||||||||||||||||||| |||||| ||  |||||||||    
T  30608624 taacggagataaaatgtgaggattttaaaaacatttaatgaaatatagagactattct 30608681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 64
Target Start/End: Complemental strand, 38759803 - 38759746
Alignment:
Q  7 taacggaggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactattct 64  Q
    ||||||||  ||||| | ||||||||||||||||||| |||||||||  |||||||||    
T  38759803 taacggagataaaatttgaggattttaaaaacatttaatgaaatgtatagactattct 38759746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 64
Target Start/End: Complemental strand, 48553995 - 48553938
Alignment:
Q  7 taacggaggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactattct 64  Q
    ||||||||  ||||||| |||||||||||||  |||| ||||||||| ||||||||||    
T  48553995 taacggagataaaatgtgaggattttaaaaaggtttaatgaaatgtatggactattct 48553938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 64
Target Start/End: Complemental strand, 51906519 - 51906462
Alignment:
Q  7 taacggaggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactattct 64  Q
    ||||||||  ||||||| ||||| ||||||||||||| ||||| ||| ||||||||||    
T  51906519 taacggagataaaatgtgaggatattaaaaacatttaatgaaacgtagggactattct 51906462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 28 - 64
Target Start/End: Original strand, 7118176 - 7118212
Alignment:
Q  28 attttaaaaacatttattgaaatgtaaggactattct 64  Q
    |||||||||||||||| ||||||||| ||||||||||    
T  7118176 attttaaaaacatttaatgaaatgtatggactattct 7118212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 7 - 51
Target Start/End: Original strand, 35166857 - 35166901
Alignment:
Q  7 taacggaggaaaaatgtaaggattttaaaaacatttattgaaatg 51  Q
    ||||||||  ||||||| ||||||||||||||||||| |||||||    
T  35166857 taacggagataaaatgtgaggattttaaaaacatttaatgaaatg 35166901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 16 - 64
Target Start/End: Original strand, 54168823 - 54168871
Alignment:
Q  16 aaaaatgtaaggattttaaaaacatttattgaaatgtaaggactattct 64  Q
    ||||||||| |||||||||||| ||||||| ||||||| ||| ||||||    
T  54168823 aaaaatgtagggattttaaaaatatttattaaaatgtagggattattct 54168871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 83; Significance: 3e-39; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 29917523 - 29917625
Alignment:
Q  1 ttacgctaacggaggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactattctcaaaattgtacaaaacgtagggaccaaaaacatatt 100  Q
    |||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||| || ||||| ||||||||||||||||||||    
T  29917523 ttacgctaacggagaaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattctcaaaatcgtgcaaaatgtagggaccaaaaacatatt 29917622  T
Q  101 taa 103  Q
    |||    
T  29917623 taa 29917625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 6 - 103
Target Start/End: Complemental strand, 29917204 - 29917107
Alignment:
Q  6 ctaacggaggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactattctcaaaattgtacaaaacgtagggaccaaaaacatatttaa 103  Q
    ||||||||| ||||||||| |||||||||||||||||||||||||||| |||||||||||||||| |  ||||||||||||| |||||||||||||||    
T  29917204 ctaacggagaaaaaatgtagggattttaaaaacatttattgaaatgtagggactattctcaaaatcgcgcaaaacgtagggatcaaaaacatatttaa 29917107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 13 - 102
Target Start/End: Original strand, 12734601 - 12734691
Alignment:
Q  13 aggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggact-attctcaaaattgtacaaaacgtagggaccaaaaacatattta 102  Q
    |||||||||||| |||||||||||||||||||||||||||||| ||| ||||||||||| || ||||||||||||||||||||||||||||    
T  12734601 aggaaaaatgtagggattttaaaaacatttattgaaatgtaagaactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatattta 12734691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 8 - 103
Target Start/End: Complemental strand, 24846060 - 24845965
Alignment:
Q  8 aacggaggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactattctcaaaattgtacaaaacgtagggaccaaaaacatatttaa 103  Q
    |||||||||||||| || | |||||||||||||||||||||||||||||||||||||||||||||| ||||| |||| ||| ||||||| ||||||    
T  24846060 aacggaggaaaaatataggaattttaaaaacatttattgaaatgtaaggactattctcaaaattgtgcaaaatgtagagactaaaaacagatttaa 24845965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 6 - 103
Target Start/End: Complemental strand, 12734272 - 12734175
Alignment:
Q  6 ctaacggaggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactattctcaaaattgtacaaaacgtagggaccaaaaacatatttaa 103  Q
    ||||||||| ||||||||| |||||||||||| ||| ||||||||||| |||||||||||||||| |  ||||| |||||||||||||||||||||||    
T  12734272 ctaacggagaaaaaatgtagggattttaaaaatattcattgaaatgtagggactattctcaaaatcgcgcaaaatgtagggaccaaaaacatatttaa 12734175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 7 - 103
Target Start/End: Complemental strand, 36155370 - 36155273
Alignment:
Q  7 taacggaggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactatt-ctcaaaattgtacaaaacgtagggaccaaaaacatatttaa 103  Q
    |||||||| |||||||||||||||||||||||||||||| ||||||| ||||||||  ||||| | | |||||| ||||||||||| | |||||||||    
T  36155370 taacggagtaaaaatgtaaggattttaaaaacatttattaaaatgtagggactattattcaaagtcgcacaaaatgtagggaccaatagcatatttaa 36155273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 5 - 54
Target Start/End: Complemental strand, 4624461 - 4624412
Alignment:
Q  5 gctaacggaggaaaaatgtaaggattttaaaaacatttattgaaatgtaa 54  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||    
T  4624461 gctaacggaggaaaaatgtagggattttaaaaacatttattgaaatgtaa 4624412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 103
Target Start/End: Complemental strand, 4624623 - 4624535
Alignment:
Q  16 aaaaatgtaaggattttaaaaacatttattgaaatgtaaggactattc-tcaaaattgtacaaaacgtagggaccaaaaacatatttaa 103  Q
    ||||||||| ||||||||||||||||||||||||||||| |||||||| ||||| |  | |||||  || |||||||||||||||||||    
T  4624623 aaaaatgtagggattttaaaaacatttattgaaatgtaaagactattcttcaaagtcatgcaaaatataaggaccaaaaacatatttaa 4624535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 17 - 72
Target Start/End: Complemental strand, 22601587 - 22601532
Alignment:
Q  17 aaaatgtaaggattttaaaaacatttattgaaatgtaaggactattctcaaaattg 72  Q
    |||||||||| |||||||||||||||||| ||||||| ||||||||||||||||||    
T  22601587 aaaatgtaagaattttaaaaacatttatttaaatgtagggactattctcaaaattg 22601532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 7 - 64
Target Start/End: Original strand, 6297853 - 6297910
Alignment:
Q  7 taacggaggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactattct 64  Q
    ||||||||  ||||||| ||||||||||||||||||| ||||||||||||||||||||    
T  6297853 taacggagataaaatgtgaggattttaaaaacatttaatgaaatgtaaggactattct 6297910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 7 - 103
Target Start/End: Complemental strand, 44148676 - 44148579
Alignment:
Q  7 taacggaggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactattct-caaaattgtacaaaacgtagggaccaaaaacatatttaa 103  Q
    |||||||| |||||||| |||||||||||||| |||||| ||||||| |||||||||| |||||  |   |||| |||||||| ||||||||||||||    
T  44148676 taacggagtaaaaatgtgaggattttaaaaacgtttattaaaatgtagggactattcttcaaaagagcgtaaaatgtagggactaaaaacatatttaa 44148579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 17 - 64
Target Start/End: Original strand, 6298036 - 6298083
Alignment:
Q  17 aaaatgtaaggattttaaaaacatttattgaaatgtaaggactattct 64  Q
    ||||||| ||||||||||||||||||| ||||||||||||||||||||    
T  6298036 aaaatgtgaggattttaaaaacatttaatgaaatgtaaggactattct 6298083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 6 - 64
Target Start/End: Complemental strand, 20682808 - 20682750
Alignment:
Q  6 ctaacggaggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactattct 64  Q
    ||||||||| |||||| | | ||||||||||||||||||| ||||||||||||||||||    
T  20682808 ctaacggagtaaaaatatgaagattttaaaaacatttattaaaatgtaaggactattct 20682750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 6 - 103
Target Start/End: Original strand, 20682914 - 20683012
Alignment:
Q  6 ctaacggaggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactattc-tcaaaattgtacaaaacgtagggaccaaaaacatatttaa 103  Q
    ||||||||| ||||||||   ||||||||||||||||||| |||||||||||| |||| | ||||| |  | ||| ||||||||||| |||||||||||    
T  20682914 ctaacggagtaaaaatgtggagattttaaaaacatttattaaaatgtaaggaccattctttaaaatcgcgctaaatgtagggaccaataacatatttaa 20683012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 26 - 103
Target Start/End: Original strand, 21005959 - 21006037
Alignment:
Q  26 ggattttaaaaacatttattgaaatgtaaggacta-ttctcaaaattgtacaaaacgtagggaccaaaaacatatttaa 103  Q
    ||||||||||||||||||||||||||||||||||| || |||||      ||||| |||||||||||||||||||||||    
T  21005959 ggattttaaaaacatttattgaaatgtaaggactatttttcaaagccacgcaaaatgtagggaccaaaaacatatttaa 21006037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 17 - 62
Target Start/End: Original strand, 36156359 - 36156404
Alignment:
Q  17 aaaatgtaaggattttaaaaacatttattgaaatgtaaggactatt 62  Q
    ||||||||||||||||||||||||||||||||||| || |||||||    
T  36156359 aaaatgtaaggattttaaaaacatttattgaaatgcaaagactatt 36156404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 16 - 64
Target Start/End: Complemental strand, 16682621 - 16682573
Alignment:
Q  16 aaaaatgtaaggattttaaaaacatttattgaaatgtaaggactattct 64  Q
    ||||||||||| ||||||||||||||| ||||||||||| |||||||||    
T  16682621 aaaaatgtaagaattttaaaaacattttttgaaatgtaatgactattct 16682573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 17 - 64
Target Start/End: Original strand, 9800344 - 9800391
Alignment:
Q  17 aaaatgtaaggattttaaaaacatttattgaaatgtaaggactattct 64  Q
    ||||||||||||||||||||||||||| |||||| || ||||||||||    
T  9800344 aaaatgtaaggattttaaaaacatttaatgaaatatatggactattct 9800391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 17 - 64
Target Start/End: Original strand, 12489528 - 12489574
Alignment:
Q  17 aaaatgtaaggattttaaaaacatttattgaaatgtaaggactattct 64  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  12489528 aaaatgtaaggattttaaaaaca-ttaatgaaatgtaaggactattct 12489574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 26 - 103
Target Start/End: Complemental strand, 10047731 - 10047653
Alignment:
Q  26 ggattttaaaaacatttattgaaatgtaaggacta-ttctcaaaattgtacaaaacgtagggaccaaaaacatatttaa 103  Q
    |||||||||||||||||| ||||||| |||||||| || ||| |||  | ||||| |||| ||||||||||||||||||    
T  10047731 ggattttaaaaacatttagtgaaatgcaaggactatttttcagaatcatgcaaaatgtagagaccaaaaacatatttaa 10047653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 26 - 103
Target Start/End: Complemental strand, 44024478 - 44024400
Alignment:
Q  26 ggattttaaaaacatttattgaaatgtaaggacta-ttctcaaaattgtacaaaacgtagggaccaaaaacatatttaa 103  Q
    |||||||||||| |||||||||||||||||||||| || ||||| |    ||||| ||| |||||||||||||||||||    
T  44024478 ggattttaaaaatatttattgaaatgtaaggactatttttcaaagtcacgcaaaatgtaaggaccaaaaacatatttaa 44024400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 27 - 103
Target Start/End: Original strand, 11089133 - 11089210
Alignment:
Q  27 gattttaaaaacatttattgaaatgtaaggacta-ttctcaaaattgtacaaaacgtagggaccaaaaacatatttaa 103  Q
    ||||||||||||||||||||||||||||| |||| || ||||| |   | |||| ||| |||||||||||||||||||    
T  11089133 gattttaaaaacatttattgaaatgtaagaactatttttcaaagtcacataaaatgtatggaccaaaaacatatttaa 11089210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 7 - 64
Target Start/End: Complemental strand, 26720420 - 26720363
Alignment:
Q  7 taacggaggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactattct 64  Q
    |||| ||| ||||||||| |||||||||||| ||||| ||||||||| ||||||||||    
T  26720420 taacagagaaaaaatgtagggattttaaaaatatttaatgaaatgtagggactattct 26720363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 17 - 64
Target Start/End: Complemental strand, 6297551 - 6297504
Alignment:
Q  17 aaaatgtaaggattttaaaaacatttattgaaatgtaaggactattct 64  Q
    ||||||| ||||||||||||||||||| ||||||||| | ||||||||    
T  6297551 aaaatgtgaggattttaaaaacatttaatgaaatgtaggaactattct 6297504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 17 - 64
Target Start/End: Complemental strand, 13315291 - 13315244
Alignment:
Q  17 aaaatgtaaggattttaaaaacatttattgaaatgtaaggactattct 64  Q
    ||||||| | ||||||||||||||||| ||||||||| ||||||||||    
T  13315291 aaaatgtgatgattttaaaaacatttaatgaaatgtagggactattct 13315244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 17 - 64
Target Start/End: Complemental strand, 16662257 - 16662210
Alignment:
Q  17 aaaatgtaaggattttaaaaacatttattgaaatgtaaggactattct 64  Q
    ||||||| || |||||||||||||||| ||||||||| ||||||||||    
T  16662257 aaaatgtgagaattttaaaaacatttaatgaaatgtagggactattct 16662210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 17 - 64
Target Start/End: Complemental strand, 17914286 - 17914239
Alignment:
Q  17 aaaatgtaaggattttaaaaacatttattgaaatgtaaggactattct 64  Q
    ||||||| ||||||||||||||||||| | ||||||| ||||||||||    
T  17914286 aaaatgtgaggattttaaaaacatttaataaaatgtagggactattct 17914239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 7 - 62
Target Start/End: Original strand, 21006113 - 21006168
Alignment:
Q  7 taacggaggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactatt 62  Q
    ||||||||  ||||||| ||||||||||||||||||| | ||||||| ||||||||    
T  21006113 taacggagataaaatgtgaggattttaaaaacatttaataaaatgtagggactatt 21006168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 23 - 62
Target Start/End: Original strand, 45369129 - 45369168
Alignment:
Q  23 taaggattttaaaaacatttattgaaatgtaaggactatt 62  Q
    |||| |||||||||||||||||||||||||||||| ||||    
T  45369129 taagaattttaaaaacatttattgaaatgtaaggattatt 45369168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 64
Target Start/End: Complemental strand, 9800127 - 9800081
Alignment:
Q  18 aaatgtaaggattttaaaaacatttattgaaatgtaaggactattct 64  Q
    |||||| ||||||||||||||||||| | ||||||||||| ||||||    
T  9800127 aaatgtgaggattttaaaaacatttaataaaatgtaaggattattct 9800081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 64
Target Start/End: Original strand, 26997860 - 26997917
Alignment:
Q  7 taacggaggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactattct 64  Q
    ||||||||  ||||||| ||||||||||||| | ||| ||||||||| ||||||||||    
T  26997860 taacggagataaaatgtgaggattttaaaaataattaatgaaatgtatggactattct 26997917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 53
Target Start/End: Complemental strand, 34614106 - 34614070
Alignment:
Q  16 aaaaatgtaaggattttaaaaacatttattgaaatgta 53  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  34614106 aaaaatgtaag-attttaaaaacatttattgaaatgta 34614070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 4694434 - 4694478
Alignment:
Q  18 aaatgtaaggattttaaaaacatttattgaaatgtaaggactatt 62  Q
    ||||||| |||||||||||||||||| | ||||||| ||||||||    
T  4694434 aaatgtagggattttaaaaacatttacttaaatgtagggactatt 4694478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 54
Target Start/End: Complemental strand, 6297715 - 6297687
Alignment:
Q  26 ggattttaaaaacatttattgaaatgtaa 54  Q
    |||||||||||||||||||||||||||||    
T  6297715 ggattttaaaaacatttattgaaatgtaa 6297687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 83; Significance: 3e-39; HSPs: 42)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 3191902 - 3191800
Alignment:
Q  1 ttacgctaacggaggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactattctcaaaattgtacaaaacgtagggaccaaaaacatatt 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| || ||||| |||||||| |||||||||||    
T  3191902 ttacgctaacggaggaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattctcaaaatcgtgcaaaatgtagggactaaaaacatatt 3191803  T
Q  101 taa 103  Q
    |||    
T  3191802 taa 3191800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 5747177 - 5747279
Alignment:
Q  1 ttacgctaacggaggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactattctcaaaattgtacaaaacgtagggaccaaaaacatatt 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||| |   |||| ||||||||||||||||||||    
T  5747177 ttacgctaacggaggaaaaatgtagggattttaaaaacatttattgaaatgtagggactattctcaaaatcgcgtaaaatgtagggaccaaaaacatatt 5747276  T
Q  101 taa 103  Q
    |||    
T  5747277 taa 5747279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 6543519 - 6543417
Alignment:
Q  1 ttacgctaacggaggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactattctcaaaattgtacaaaacgtagggaccaaaaacatatt 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||| |   |||| ||||||||||||||||||||    
T  6543519 ttacgctaacggaggaaaaatgtagggattttaaaaacatttattgaaatgtagggactattctcaaaatcgcgtaaaatgtagggaccaaaaacatatt 6543420  T
Q  101 taa 103  Q
    |||    
T  6543419 taa 6543417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 21949504 - 21949402
Alignment:
Q  1 ttacgctaacggaggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactattctcaaaattgtacaaaacgtagggaccaaaaacatatt 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||| |   |||| ||||||||||||||||||||    
T  21949504 ttacgctaacggaggaaaaatgtagggattttaaaaacatttattgaaatgtagggactattctcaaaatcgcgtaaaatgtagggaccaaaaacatatt 21949405  T
Q  101 taa 103  Q
    |||    
T  21949404 taa 21949402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 39402630 - 39402732
Alignment:
Q  1 ttacgctaacggaggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactattctcaaaattgtacaaaacgtagggaccaaaaacatatt 100  Q
    |||||||| ||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||| ||  |||| ||||||||||||||||||||    
T  39402630 ttacgctaccggaggaaaaatgtagggattttaaaaatatttattgaaatgtaaggactattctcaaaatcgtgtaaaatgtagggaccaaaaacatatt 39402729  T
Q  101 taa 103  Q
    |||    
T  39402730 taa 39402732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 6 - 103
Target Start/End: Original strand, 3192221 - 3192318
Alignment:
Q  6 ctaacggaggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactattctcaaaattgtacaaaacgtagggaccaaaaacatatttaa 103  Q
    ||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||| | ||||||  ||||||||||||||||||||||    
T  3192221 ctaacggagaaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattctcaaaatcgcacaaaatatagggaccaaaaacatatttaa 3192318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 6 - 103
Target Start/End: Complemental strand, 39402311 - 39402214
Alignment:
Q  6 ctaacggaggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactattctcaaaattgtacaaaacgtagggaccaaaaacatatttaa 103  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||| |  ||||| |||||||||||||||||||||||    
T  39402311 ctaacggaggaaaaatgtagggattttaaaaacatttattgaaatgtagggactattctcaaaatcgcgcaaaatgtagggaccaaaaacatatttaa 39402214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 28641577 - 28641679
Alignment:
Q  1 ttacgctaacggaggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactattctcaaaattgtacaaaacgtagggaccaaaaacatatt 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||| |   |||| |||||||||||| |||||||    
T  28641577 ttacgctaacggaggaaaaatgtagggattttaaaaacatttattgaaatgtagggactattctcaaaatcgcgtaaaatgtagggaccaaacacatatt 28641676  T
Q  101 taa 103  Q
    |||    
T  28641677 taa 28641679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 31162525 - 31162423
Alignment:
Q  1 ttacgctaacggaggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactattctcaaaattgtacaaaacgtagggaccaaaaacatatt 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||     |||| ||||||||||||||||||||    
T  31162525 ttacgctaacggaggaaaaatgtagggattttaaaaacatttattgaaatgtagggactattctcaaaatcacgtaaaatgtagggaccaaaaacatatt 31162426  T
Q  101 taa 103  Q
    |||    
T  31162425 taa 31162423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 13 - 103
Target Start/End: Complemental strand, 3878865 - 3878774
Alignment:
Q  13 aggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggact-attctcaaaattgtacaaaacgtagggaccaaaaacatatttaa 103  Q
    ||||||||| || |||||||||||||||||||||||||||||||||| ||||||||||| || |||||||||||||||||||||||||||||    
T  3878865 aggaaaaatatagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaa 3878774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 5 - 103
Target Start/End: Original strand, 119947 - 120046
Alignment:
Q  5 gctaacggaggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggacta-ttctcaaaattgtacaaaacgtagggaccaaaaacatatttaa 103  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||   |  ||||| |||||||||||||||||||||||    
T  119947 gctaacggaggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactatttgtcaaagaagggcaaaatgtagggaccaaaaacatatttaa 120046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 15 - 103
Target Start/End: Complemental strand, 31093086 - 31092997
Alignment:
Q  15 gaaaaatgtaaggattttaaaaacatttattgaaatgtaaggact-attctcaaaattgtacaaaacgtagggaccaaaaacatatttaa 103  Q
    |||||||||| ||||||||||||||| |||||||||||||||||| ||||||||||| || |||||||| ||||||||||||||||||||    
T  31093086 gaaaaatgtagggattttaaaaacatctattgaaatgtaaggactaattctcaaaatcgtgcaaaacgttgggaccaaaaacatatttaa 31092997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 6 - 103
Target Start/End: Original strand, 31093417 - 31093514
Alignment:
Q  6 ctaacggaggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactattctcaaaattgtacaaaacgtagggaccaaaaacatatttaa 103  Q
    ||||||||| ||||||||| |||||||||||||||| ||||||||||| |||||||| ||||||| |  ||||| |||||||||||||||||||||||    
T  31093417 ctaacggagaaaaaatgtagggattttaaaaacattcattgaaatgtagggactattttcaaaatcgcgcaaaatgtagggaccaaaaacatatttaa 31093514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 15 - 103
Target Start/End: Original strand, 31162851 - 31162939
Alignment:
Q  15 gaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactattctcaaaattgtacaaaacgtagggaccaaaaacatatttaa 103  Q
    |||||||||| |||||||||||||||||||||||||||||||| |||||||||||| |   |||| |||||||||||||||||||||||    
T  31162851 gaaaaatgtagggattttaaaaacatttattgaaatgtaaggattattctcaaaatcgcgtaaaatgtagggaccaaaaacatatttaa 31162939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 15 - 103
Target Start/End: Complemental strand, 28641251 - 28641163
Alignment:
Q  15 gaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactattctcaaaattgtacaaaacgtagggaccaaaaacatatttaa 103  Q
    |||||||||| |||||||||||||||||||||||||||| ||| |||||||||||| |   |||| |||||||||||||||||||||||    
T  28641251 gaaaaatgtagggattttaaaaacatttattgaaatgtagggattattctcaaaatcgcgtaaaatgtagggaccaaaaacatatttaa 28641163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 5 - 103
Target Start/End: Original strand, 718213 - 718312
Alignment:
Q  5 gctaacggaggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactatt-ctcaaaattgtacaaaacgtagggaccaaaaacatatttaa 103  Q
    |||||||||| ||||||| | |||||||||||||||||||||||||||||| ||||||  |||||||| | ||||| ||||| |||||||||||||||||    
T  718213 gctaacggagcaaaaatgcagggattttaaaaacatttattgaaatgtaagaactattattcaaaattatgcaaaatgtaggaaccaaaaacatatttaa 718312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 5 - 103
Target Start/End: Complemental strand, 19352400 - 19352301
Alignment:
Q  5 gctaacggaggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggacta-ttctcaaaattgtacaaaacgtagggaccaaaaacatatttaa 103  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || ||||||  |   |||| ||||| |||||||||||||||||    
T  19352400 gctaacggaggaaaaatgtaagaattttaaaaacatttattgaaatgtaaggactatttgtcaaaaaagggtaaaatgtaggaaccaaaaacatatttaa 19352301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 6 - 103
Target Start/End: Original strand, 3879194 - 3879291
Alignment:
Q  6 ctaacggaggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactattctcaaaattgtacaaaacgtagggaccaaaaacatatttaa 103  Q
    ||||||||| |||||| || |||||||||||||||| ||||||||||| ||| |||||||||||| |  ||||| |||||||||||||| ||||||||    
T  3879194 ctaacggagaaaaaatatagggattttaaaaacattcattgaaatgtagggattattctcaaaatcgcgcaaaatgtagggaccaaaaatatatttaa 3879291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 15 - 103
Target Start/End: Complemental strand, 5746851 - 5746763
Alignment:
Q  15 gaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactattctcaaaattgtacaaaacgtagggaccaaaaacatatttaa 103  Q
    |||||||||| ||||||| |||||||||||||||||||| ||| |||||||||||| |   |||| |||||||||||||||||||||||    
T  5746851 gaaaaatgtagggatttttaaaacatttattgaaatgtagggattattctcaaaatcgcgtaaaatgtagggaccaaaaacatatttaa 5746763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 7 - 103
Target Start/End: Complemental strand, 14625220 - 14625124
Alignment:
Q  7 taacggaggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactattctcaaaattgtacaaaacgtagggaccaaaaacatatttaa 103  Q
    |||||||||||||||||| |||||||||||||||||||| |||| || |||||||  | |||||||   |||| |||||||||||||||||||||||    
T  14625220 taacggaggaaaaatgtagggattttaaaaacatttattaaaatttatggactatatttaaaattgcgtaaaatgtagggaccaaaaacatatttaa 14625124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 15 - 103
Target Start/End: Original strand, 21949830 - 21949918
Alignment:
Q  15 gaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactattctcaaaattgtacaaaacgtagggaccaaaaacatatttaa 103  Q
    |||||||||| |||||||||||||||||||||||||||| |||||||||| ||||| |   |||| |||||||||||||||||| ||||    
T  21949830 gaaaaatgtagggattttaaaaacatttattgaaatgtagggactattcttaaaatcgcgtaaaatgtagggaccaaaaacataattaa 21949918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 5 - 103
Target Start/End: Complemental strand, 119111 - 119012
Alignment:
Q  5 gctaacggaggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggacta-ttctcaaaattgtacaaaacgtagggaccaaaaacatatttaa 103  Q
    |||| ||||||||||||||| ||||||||||||||||||||||||||||||||||| || | |||   |  ||||| |||||||||||||||||||||||    
T  119111 gctatcggaggaaaaatgtagggattttaaaaacatttattgaaatgtaaggactatttattaaaggagggcaaaatgtagggaccaaaaacatatttaa 119012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 7 - 103
Target Start/End: Original strand, 19353060 - 19353157
Alignment:
Q  7 taacggaggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactattc-tcaaaattgtacaaaacgtagggaccaaaaacatatttaa 103  Q
    |||||| ||||||||||| ||||||||||||||||||||||||||| |||||||||| ||||| |   ||||||  || |||||||||||||||||||    
T  19353060 taacggtggaaaaatgtagggattttaaaaacatttattgaaatgtgaggactattcttcaaagtcacacaaaatctaaggaccaaaaacatatttaa 19353157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 62
Target Start/End: Original strand, 19353227 - 19353284
Alignment:
Q  5 gctaacggaggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactatt 62  Q
    |||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||    
T  19353227 gctaacggaggaaaaatgtatggattttaaaaacgtttattgaaatgtaaggactatt 19353284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 15 - 103
Target Start/End: Original strand, 6543845 - 6543932
Alignment:
Q  15 gaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactattctcaaaattgtacaaaacgtagggaccaaaaacatatttaa 103  Q
    |||||||||| |||||||||||||||||||||||||||| ||| |||||||||||| |   |||| ||| |||||||||||||||||||    
T  6543845 gaaaaatgtagggattttaaaaacatttattgaaatgtagggattattctcaaaatcgcgtaaaatgta-ggaccaaaaacatatttaa 6543932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 17 - 103
Target Start/End: Original strand, 4187837 - 4187924
Alignment:
Q  17 aaaatgtaaggattttaaaaacatttattgaaatgtaaggactatt-ctcaaaattgtacaaaacgtagggaccaaaaacatatttaa 103  Q
    ||||||| ||||||||||||| ||||||||||||||||||||||||  | ||| |||  ||||| |||||||| ||||||||||||||    
T  4187837 aaaatgtgaggattttaaaaatatttattgaaatgtaaggactattatttaaagttgcgcaaaatgtagggactaaaaacatatttaa 4187924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 64
Target Start/End: Complemental strand, 119272 - 119226
Alignment:
Q  18 aaatgtaaggattttaaaaacatttattgaaatgtaaggactattct 64  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||    
T  119272 aaatgtagggattttaaaaacatttattgaaatgtaaggactattct 119226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 7 - 64
Target Start/End: Original strand, 119775 - 119832
Alignment:
Q  7 taacggaggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactattct 64  Q
    |||||| ||| ||||||| |||||||||||||||||||||||||| ||||||||||||    
T  119775 taacggtggagaaatgtagggattttaaaaacatttattgaaatgcaaggactattct 119832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 7 - 103
Target Start/End: Complemental strand, 4186853 - 4186756
Alignment:
Q  7 taacggaggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactattc-tcaaaattgtacaaaacgtagggaccaaaaacatatttaa 103  Q
    |||||||| ||||||||| |||| ||||||||||||||||||||||| | ||||||| ||||| | || | ||| ||||||| ||| |||||||||||    
T  4186853 taacggagcaaaaatgtagggatattaaaaacatttattgaaatgtaggtactattcttcaaagtcgtgctaaatgtagggatcaataacatatttaa 4186756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 15 - 64
Target Start/End: Complemental strand, 19352562 - 19352513
Alignment:
Q  15 gaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactattct 64  Q
    |||||||||| |||||||||||||||||||||||||| ||||||||||||    
T  19352562 gaaaaatgtagggattttaaaaacatttattgaaatgcaaggactattct 19352513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 16 - 62
Target Start/End: Original strand, 14626089 - 14626135
Alignment:
Q  16 aaaaatgtaaggattttaaaaacatttattgaaatgtaaggactatt 62  Q
    ||||||||| |||||||||||||||||||||||||||| ||||||||    
T  14626089 aaaaatgtagggattttaaaaacatttattgaaatgtagggactatt 14626135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 7 - 64
Target Start/End: Original strand, 87252 - 87309
Alignment:
Q  7 taacggaggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactattct 64  Q
    ||||||||  ||||||| ||||||||||||||||||| ||||||||| ||||||||||    
T  87252 taacggagataaaatgtgaggattttaaaaacatttaatgaaatgtagggactattct 87309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 7 - 64
Target Start/End: Original strand, 8648056 - 8648113
Alignment:
Q  7 taacggaggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactattct 64  Q
    |||||||| |||||||| ||||||||||||| ||||| |||||||||| |||||||||    
T  8648056 taacggagaaaaaatgtgaggattttaaaaatatttaatgaaatgtaaagactattct 8648113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 7 - 103
Target Start/End: Complemental strand, 18999465 - 18999368
Alignment:
Q  7 taacggaggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactattc-tcaaaattgtacaaaacgtagggaccaaaaacatatttaa 103  Q
    ||||||||  ||||||  ||||||||||||| ||||| ||||||||| ||||||||| ||||||  || ||||| ||| |||| ||||||||||||||    
T  18999465 taacggagataaaatgagaggattttaaaaatatttaatgaaatgtatggactattcttcaaaagagtgcaaaatgtaaggactaaaaacatatttaa 18999368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 26 - 62
Target Start/End: Original strand, 3406695 - 3406731
Alignment:
Q  26 ggattttaaaaacatttattgaaatgtaaggactatt 62  Q
    |||||||||||||||||||||||||||||||||||||    
T  3406695 ggattttaaaaacatttattgaaatgtaaggactatt 3406731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 17 - 103
Target Start/End: Original strand, 18999641 - 18999728
Alignment:
Q  17 aaaatgtaaggattttaaaaacatttattgaaatgtaaggactattc-tcaaaattgtacaaaacgtagggaccaaaaacatatttaa 103  Q
    ||||||| ||||||||||||| ||||| ||||||||| ||||||||| |||||||    ||||| ||| |||| ||||||||||||||    
T  18999641 aaaatgtgaggattttaaaaatatttaatgaaatgtatggactattcttcaaaatgaagcaaaatgtaaggactaaaaacatatttaa 18999728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 27 - 69
Target Start/End: Original strand, 18340661 - 18340703
Alignment:
Q  27 gattttaaaaacatttattgaaatgtaaggactattctcaaaa 69  Q
    ||||||||||||||||| |||||||||||||||||||| ||||    
T  18340661 gattttaaaaacatttaatgaaatgtaaggactattcttaaaa 18340703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 7 - 64
Target Start/End: Original strand, 31588337 - 31588394
Alignment:
Q  7 taacggaggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactattct 64  Q
    ||||||||  ||||||| ||||||||||||| ||||| ||||||||| ||||||||||    
T  31588337 taacggagataaaatgttaggattttaaaaatatttaatgaaatgtagggactattct 31588394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 64
Target Start/End: Original strand, 30351704 - 30351752
Alignment:
Q  16 aaaaatgtaaggattttaaaaacatttattgaaatgtaaggactattct 64  Q
    ||||||||| | |||||||||| ||||||||||||||| ||||||||||    
T  30351704 aaaaatgtaggaattttaaaaatatttattgaaatgtagggactattct 30351752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 60
Target Start/End: Original strand, 8647360 - 8647394
Alignment:
Q  26 ggattttaaaaacatttattgaaatgtaaggacta 60  Q
    |||||||||||||||||||||||||| ||||||||    
T  8647360 ggattttaaaaacatttattgaaatgcaaggacta 8647394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 64
Target Start/End: Original strand, 30415475 - 30415531
Alignment:
Q  7 taacggaggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactattct 64  Q
    ||||||||  ||||||| ||||||||||||||| ||| ||||||||| ||||||||||    
T  30415475 taacggagacaaaatgtgaggattttaaaaaca-ttaatgaaatgtagggactattct 30415531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 64
Target Start/End: Complemental strand, 37813474 - 37813417
Alignment:
Q  7 taacggaggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactattct 64  Q
    |||||| |||||||| || | |||||||||||| ||| ||||||||| ||||||||||    
T  37813474 taacggtggaaaaatttaggaattttaaaaacacttaatgaaatgtatggactattct 37813417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 83; Significance: 3e-39; HSPs: 55)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 39096942 - 39097044
Alignment:
Q  1 ttacgctaacggaggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactattctcaaaattgtacaaaacgtagggaccaaaaacatatt 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||| || ||||| ||||||||||||||||||||    
T  39096942 ttacgctaacggaggaaaaatgtagggattttaaaaacatttattgaaatgtaaggattattctcaaaatcgtgcaaaatgtagggaccaaaaacatatt 39097041  T
Q  101 taa 103  Q
    |||    
T  39097042 taa 39097044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 1804648 - 1804750
Alignment:
Q  1 ttacgctaacggaggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactattctcaaaattgtacaaaacgtagggaccaaaaacatatt 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||| |   |||| ||||||||||||||||||||    
T  1804648 ttacgctaacggaggaaaaatgtagggattttaaaaacatttattgaaatgtagggactattctcaaaatcgcgtaaaatgtagggaccaaaaacatatt 1804747  T
Q  101 taa 103  Q
    |||    
T  1804748 taa 1804750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 6476191 - 6476089
Alignment:
Q  1 ttacgctaacggaggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactattctcaaaattgtacaaaacgtagggaccaaaaacatatt 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||| |   |||| ||||||||||||||||||||    
T  6476191 ttacgctaacggaggaaaaatgtagggattttaaaaacatttattgaaatgtagggactattctcaaaatcgcgtaaaatgtagggaccaaaaacatatt 6476092  T
Q  101 taa 103  Q
    |||    
T  6476091 taa 6476089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 11451172 - 11451274
Alignment:
Q  1 ttacgctaacggaggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactattctcaaaattgtacaaaacgtagggaccaaaaacatatt 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||| |   |||| ||||||||||||||||||||    
T  11451172 ttacgctaacggaggaaaaatgtagggattttaaaaacatttattgaaatgtagggactattctcaaaatcgcgtaaaatgtagggaccaaaaacatatt 11451271  T
Q  101 taa 103  Q
    |||    
T  11451272 taa 11451274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 27377753 - 27377651
Alignment:
Q  1 ttacgctaacggaggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactattctcaaaattgtacaaaacgtagggaccaaaaacatatt 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||| |   |||| ||||||||||||||||||||    
T  27377753 ttacgctaacggaggaaaaatgtagggattttaaaaacatttattgaaatgtagggactattctcaaaatcgcgtaaaatgtagggaccaaaaacatatt 27377654  T
Q  101 taa 103  Q
    |||    
T  27377653 taa 27377651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 6 - 103
Target Start/End: Complemental strand, 39096623 - 39096526
Alignment:
Q  6 ctaacggaggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactattctcaaaattgtacaaaacgtagggaccaaaaacatatttaa 103  Q
    ||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||| | ||||||  ||||||||||||||||||||||    
T  39096623 ctaacggagaaaaaatgtatggattttaaaaacatttattgaaatgtaaggactattctcaaaatcgcacaaaatatagggaccaaaaacatatttaa 39096526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 13 - 103
Target Start/End: Complemental strand, 3854159 - 3854068
Alignment:
Q  13 aggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggact-attctcaaaattgtacaaaacgtagggaccaaaaacatatttaa 103  Q
    |||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||| || |||||||||||||||||||||||||||||    
T  3854159 aggaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaa 3854068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 13 - 103
Target Start/End: Complemental strand, 12089787 - 12089696
Alignment:
Q  13 aggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggacta-ttctcaaaattgtacaaaacgtagggaccaaaaacatatttaa 103  Q
    |||||||||||| |||||||||||||||||||||||||||||| |||| ||||||||||||| |||||||||||||||||||||||||||||    
T  12089787 aggaaaaatgtagggattttaaaaacatttattgaaatgtaagaactaattctcaaaattgtgcaaaacgtagggaccaaaaacatatttaa 12089696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 12 - 103
Target Start/End: Complemental strand, 26525555 - 26525464
Alignment:
Q  12 gaggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactattctcaaaattgtacaaaacgtagggaccaaaaacatatttaa 103  Q
    ||||||||||||| |||||||||||| ||||||||||||||||| |||| ||||||||| || |||||||||||||||||||||||||||||    
T  26525555 gaggaaaaatgtagggattttaaaaatatttattgaaatgtaagaactactctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaa 26525464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 6 - 103
Target Start/End: Original strand, 3854488 - 3854585
Alignment:
Q  6 ctaacggaggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactattctcaaaattgtacaaaacgtagggaccaaaaacatatttaa 103  Q
    ||||||||| ||||||||| |||||||||||||||| ||||||||||| |||||||||||||||| |  ||||| |||||||||||||||||||||||    
T  3854488 ctaacggagaaaaaatgtagggattttaaaaacattcattgaaatgtagggactattctcaaaatcgcgcaaaatgtagggaccaaaaacatatttaa 3854585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 6 - 103
Target Start/End: Original strand, 12090116 - 12090213
Alignment:
Q  6 ctaacggaggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactattctcaaaattgtacaaaacgtagggaccaaaaacatatttaa 103  Q
    ||||||||| ||||||||| |||||||||||||||| ||||||||||| |||||||||||||||| |  ||||| | |||||||||||||||||||||    
T  12090116 ctaacggagaaaaaatgtagggattttaaaaacattcattgaaatgtagggactattctcaaaatcgcgcaaaatgcagggaccaaaaacatatttaa 12090213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 15 - 103
Target Start/End: Complemental strand, 1804322 - 1804234
Alignment:
Q  15 gaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactattctcaaaattgtacaaaacgtagggaccaaaaacatatttaa 103  Q
    |||||||||| |||||||||||||||||||||||||||| |||||||||||||||| |   |||| |||||||||||||||||||||||    
T  1804322 gaaaaatgtagggattttaaaaacatttattgaaatgtagggactattctcaaaatcgcgtaaaatgtagggaccaaaaacatatttaa 1804234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 15 - 103
Target Start/End: Original strand, 6476517 - 6476605
Alignment:
Q  15 gaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactattctcaaaattgtacaaaacgtagggaccaaaaacatatttaa 103  Q
    |||||||||| |||||||||||||||||||||||||||| |||||||||||||||| |   |||| |||||||||||||||||||||||    
T  6476517 gaaaaatgtagggattttaaaaacatttattgaaatgtagggactattctcaaaatcgcgtaaaatgtagggaccaaaaacatatttaa 6476605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 34038237 - 34038339
Alignment:
Q  1 ttacgctaacggaggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactattctcaaaattgtacaaaacgtagggaccaaaaacatatt 100  Q
    |||| ||||| ||||||||||||| | |||||||||| ||||||||||||||||  |||||||||||||| || |||||||||||||||||| || ||||    
T  34038237 ttacactaactgaggaaaaatgtaggaattttaaaaatatttattgaaatgtaaaaactattctcaaaatcgtgcaaaacgtagggaccaaatacgtatt 34038336  T
Q  101 taa 103  Q
    |||    
T  34038337 taa 34038339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 6 - 103
Target Start/End: Original strand, 26525885 - 26525982
Alignment:
Q  6 ctaacggaggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactattctcaaaattgtacaaaacgtagggaccaaaaacatatttaa 103  Q
    ||||||||| |||| |||| ||||||||||||||||||||||||| || |||||||| ||||||| |  ||||| |||||||||||||||||||||||    
T  26525885 ctaacggagaaaaattgtagggattttaaaaacatttattgaaatatagggactattatcaaaatcgcgcaaaatgtagggaccaaaaacatatttaa 26525982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 5 - 103
Target Start/End: Complemental strand, 10708124 - 10708025
Alignment:
Q  5 gctaacggaggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggacta-ttctcaaaattgtacaaaacgtagggaccaaaaacatatttaa 103  Q
    ||||||||| |||||||||| | ||||||||||||||||||||||||||||||||| || ||||||  |  ||||| |||||||||||||||||||||||    
T  10708124 gctaacggatgaaaaatgtaggaattttaaaaacatttattgaaatgtaaggactatttgtcaaaagagggcaaaatgtagggaccaaaaacatatttaa 10708025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 13 - 103
Target Start/End: Complemental strand, 22701605 - 22701518
Alignment:
Q  13 aggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggact-attctcaaaattgtacaaaacgtagggaccaaaaacatatttaa 103  Q
    |||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||| || ||||||||    |||||||||||||||||    
T  22701605 aggaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgt----accaaaaacatatttaa 22701518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 6 - 103
Target Start/End: Complemental strand, 34037908 - 34037811
Alignment:
Q  6 ctaacggaggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactattctcaaaattgtacaaaacgtagggaccaaaaacatatttaa 103  Q
    ||||||||| ||||||||| |||||||||||||||| ||||||||||| |||||||||||||||| |  |||||  ||| |||||||||| |||||||    
T  34037908 ctaacggagaaaaaatgtagggattttaaaaacattcattgaaatgtagggactattctcaaaatcgcgcaaaatatagagaccaaaaacgtatttaa 34037811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 7 - 103
Target Start/End: Original strand, 39947077 - 39947174
Alignment:
Q  7 taacggaggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactatt-ctcaaaattgtacaaaacgtagggaccaaaaacatatttaa 103  Q
    |||||| ||||||||||| |||||||||||||||||||||||||||||||||||||  ||||| |    ||||| |||||||||||||||||||||||    
T  39947077 taacggtggaaaaatgtacggattttaaaaacatttattgaaatgtaaggactattgttcaaagtcactcaaaatgtagggaccaaaaacatatttaa 39947174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 15 - 103
Target Start/End: Complemental strand, 11450846 - 11450758
Alignment:
Q  15 gaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactattctcaaaattgtacaaaacgtagggaccaaaaacatatttaa 103  Q
    |||||||||| ||||||| |||||||||||||||||||| ||| |||||||||||| |   |||| |||||||||||||||||||||||    
T  11450846 gaaaaatgtagggatttttaaaacatttattgaaatgtagggattattctcaaaatcgcgtaaaatgtagggaccaaaaacatatttaa 11450758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 15 - 103
Target Start/End: Original strand, 27378079 - 27378167
Alignment:
Q  15 gaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactattctcaaaattgtacaaaacgtagggaccaaaaacatatttaa 103  Q
    |||||||||| ||||||| |||||||||||||||||||| ||| |||||||||||| |   |||| |||||||||||||||||||||||    
T  27378079 gaaaaatgtagggatttttaaaacatttattgaaatgtagggattattctcaaaatcgcgtaaaatgtagggaccaaaaacatatttaa 27378167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 5 - 103
Target Start/End: Complemental strand, 39945943 - 39945844
Alignment:
Q  5 gctaacggaggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactatt-ctcaaaattgtacaaaacgtagggaccaaaaacatatttaa 103  Q
    |||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||  ||||| |    ||||| || ||||||||||||||||||||    
T  39945943 gctaacggtggaaaaatataaggattttaaaaacatttattgaaatgtaaggactattgttcaaagtcactcaaaatgttgggaccaaaaacatatttaa 39945844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 7 - 64
Target Start/End: Complemental strand, 10709574 - 10709517
Alignment:
Q  7 taacggaggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactattct 64  Q
    |||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  10709574 taacggtggaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattct 10709517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 5 - 103
Target Start/End: Complemental strand, 44930084 - 44929985
Alignment:
Q  5 gctaacggaggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactatt-ctcaaaattgtacaaaacgtagggaccaaaaacatatttaa 103  Q
    |||||||||  ||||||||| |||||||||||| ||||||||||||||||||||||||  | |||||   | |||| |||||||||||||||||||||||    
T  44930084 gctaacggataaaaaatgtagggattttaaaaatatttattgaaatgtaaggactattaattaaaatgagaaaaaatgtagggaccaaaaacatatttaa 44929985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 9 - 103
Target Start/End: Original strand, 44934676 - 44934771
Alignment:
Q  9 acggaggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactatt-ctcaaaattgtacaaaacgtagggaccaaaaacatatttaa 103  Q
    ||||| |||||||||| |||||||||||||||||||||||||||||||||||||  | |||||     |||| |||||||||||||||||||||||    
T  44934676 acggatgaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggaaaaatgtagggaccaaaaacatatttaa 44934771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 17 - 103
Target Start/End: Original strand, 23222864 - 23222951
Alignment:
Q  17 aaaatgtaaggattttaaaaacatttattgaaatgtaaggactatt-ctcaaaattgtacaaaacgtagggaccaaaaacatatttaa 103  Q
    ||||||| |||||||||||||||| |||||||||||||||||||||  | ||| |||  ||||| |||||||| ||||||||||||||    
T  23222864 aaaatgtgaggattttaaaaacatatattgaaatgtaaggactattatttaaagttgcgcaaaatgtagggactaaaaacatatttaa 23222951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 98
Target Start/End: Complemental strand, 18105817 - 18105723
Alignment:
Q  5 gctaacggaggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactattc-tcaaaattgtacaaaacgtagggaccaaaaacata 98  Q
    |||||| ||||||||||||| | ||||||||||| |||||||||||||| ||| ||||| ||||||| | | ||||  |||||||||||||||||    
T  18105817 gctaacagaggaaaaatgtaggaattttaaaaacctttattgaaatgtagggaatattcttcaaaatcgcataaaatttagggaccaaaaacata 18105723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 7 - 64
Target Start/End: Complemental strand, 2191316 - 2191259
Alignment:
Q  7 taacggaggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactattct 64  Q
    ||||||||  ||||||| ||||||||||||||||||| ||||||||||||||||||||    
T  2191316 taacggagataaaatgtgaggattttaaaaacatttaatgaaatgtaaggactattct 2191259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 5 - 62
Target Start/End: Original strand, 10710991 - 10711048
Alignment:
Q  5 gctaacggaggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactatt 62  Q
    |||||||| |||||||||||||||||||||||| ||||| | ||||||||||||||||    
T  10710991 gctaacgggggaaaaatgtaaggattttaaaaatatttactaaaatgtaaggactatt 10711048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 7 - 64
Target Start/End: Original strand, 18107416 - 18107473
Alignment:
Q  7 taacggaggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactattct 64  Q
    ||||||||||||||| || |||||||||||||||||||| ||||||||||| ||||||    
T  18107416 taacggaggaaaaatttagggattttaaaaacatttattaaaatgtaaggattattct 18107473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 7 - 103
Target Start/End: Complemental strand, 23221933 - 23221836
Alignment:
Q  7 taacggaggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactattc-tcaaaattgtacaaaacgtagggaccaaaaacatatttaa 103  Q
    |||||||| ||||||||| |||| ||||||||||||||||||||||| | ||||||| ||||| | || | ||| ||||||| ||| |||||||||||    
T  23221933 taacggagcaaaaatgtagggatattaaaaacatttattgaaatgtaggtactattcttcaaagtcgtgctaaatgtagggatcaataacatatttaa 23221836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 5 - 103
Target Start/End: Original strand, 38110397 - 38110492
Alignment:
Q  5 gctaacggaggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactattctcaaaattgtacaaaacgtagggaccaaaaacatatttaa 103  Q
    |||||||||||||||||||| ||||||| ||||||||||   ||||||| |||||| | |||||||||   |||| ||||||| |||| ||||||||||    
T  38110397 gctaacggaggaaaaatgtagggattttgaaaacattta---aaatgtagggactaatttcaaaattgcgtaaaatgtagggatcaaatacatatttaa 38110492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 26 - 103
Target Start/End: Original strand, 32861050 - 32861128
Alignment:
Q  26 ggattttaaaaacatttattgaaatgtaaggactattct-caaaattgtacaaaacgtagggaccaaaaacatatttaa 103  Q
    ||||||||||||||||||||||||| ||||||||||| | |||| |   |||||| | |||||||||||||||||||||    
T  32861050 ggattttaaaaacatttattgaaatataaggactatttttcaaagtcacacaaaatgcagggaccaaaaacatatttaa 32861128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 7 - 64
Target Start/End: Complemental strand, 2517512 - 2517455
Alignment:
Q  7 taacggaggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactattct 64  Q
    ||||||||  ||||||| ||||||||||||||||||| ||||||||| ||||||||||    
T  2517512 taacggagataaaatgtgaggattttaaaaacatttaatgaaatgtagggactattct 2517455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 7 - 64
Target Start/End: Original strand, 10710821 - 10710878
Alignment:
Q  7 taacggaggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactattct 64  Q
    |||||| ||||||||||| | |||||||||||||||||||||||| |||| |||||||    
T  10710821 taacggtggaaaaatgtaggaattttaaaaacatttattgaaatgcaagggctattct 10710878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 17 - 64
Target Start/End: Complemental strand, 21217012 - 21216965
Alignment:
Q  17 aaaatgtaaggattttaaaaacatttattgaaatgtaaggactattct 64  Q
    ||||||| ||||||||||||||||||| ||||||||| ||||||||||    
T  21217012 aaaatgtgaggattttaaaaacatttaatgaaatgtagggactattct 21216965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 17 - 64
Target Start/End: Original strand, 21217322 - 21217369
Alignment:
Q  17 aaaatgtaaggattttaaaaacatttattgaaatgtaaggactattct 64  Q
    ||||||| ||||||||||||||||||| ||||||||| ||||||||||    
T  21217322 aaaatgtgaggattttaaaaacatttaatgaaatgtagggactattct 21217369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 17 - 64
Target Start/End: Complemental strand, 21265080 - 21265033
Alignment:
Q  17 aaaatgtaaggattttaaaaacatttattgaaatgtaaggactattct 64  Q
    ||||||| ||||||||||||||||||| ||||||||| ||||||||||    
T  21265080 aaaatgtgaggattttaaaaacatttaatgaaatgtagggactattct 21265033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 17 - 64
Target Start/End: Original strand, 21265390 - 21265437
Alignment:
Q  17 aaaatgtaaggattttaaaaacatttattgaaatgtaaggactattct 64  Q
    ||||||| ||||||||||||||||||| ||||||||| ||||||||||    
T  21265390 aaaatgtgaggattttaaaaacatttaatgaaatgtagggactattct 21265437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 26 - 103
Target Start/End: Complemental strand, 24093409 - 24093331
Alignment:
Q  26 ggattttaaaaacatttattgaaatgtaaggacta-ttctcaaaattgtacaaaacgtagggaccaaaaacatatttaa 103  Q
    |||||||||||||||||||||||||| |||||||| || ||||| |    ||||| ||||||| |||||||||||||||    
T  24093409 ggattttaaaaacatttattgaaatgcaaggactatttttcaaagtcactcaaaatgtagggatcaaaaacatatttaa 24093331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 7 - 64
Target Start/End: Complemental strand, 2035707 - 2035650
Alignment:
Q  7 taacggaggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactattct 64  Q
    ||||||||  |||||||| |||||||||||||||||||| ||||||| ||| ||||||    
T  2035707 taacggagataaaatgtagggattttaaaaacatttattaaaatgtagggattattct 2035650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 7 - 64
Target Start/End: Original strand, 3691380 - 3691437
Alignment:
Q  7 taacggaggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactattct 64  Q
    ||||||||  ||||||| | ||||||||||||||||| ||||||||| ||||||||||    
T  3691380 taacggagataaaatgtgaagattttaaaaacatttaatgaaatgtagggactattct 3691437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 28 - 64
Target Start/End: Original strand, 3624925 - 3624961
Alignment:
Q  28 attttaaaaacatttattgaaatgtaaggactattct 64  Q
    |||||||||||||||||||||||||| ||||||||||    
T  3624925 attttaaaaacatttattgaaatgtagggactattct 3624961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 28 - 64
Target Start/End: Complemental strand, 21182385 - 21182349
Alignment:
Q  28 attttaaaaacatttattgaaatgtaaggactattct 64  Q
    |||||||||||||||| ||||||||||||||||||||    
T  21182385 attttaaaaacatttaatgaaatgtaaggactattct 21182349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 55 - 103
Target Start/End: Original strand, 22704424 - 22704472
Alignment:
Q  55 ggactattctcaaaattgtacaaaacgtagggaccaaaaacatatttaa 103  Q
    |||||||||||||||| |  ||||| |||||||||||||||||||||||    
T  22704424 ggactattctcaaaatcgcgcaaaatgtagggaccaaaaacatatttaa 22704472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 24093242 - 24093198
Alignment:
Q  20 atgtaaggattttaaaaacatttattgaaatgtaaggactattct 64  Q
    |||| ||||||||||||||||||| ||||||||| ||||||||||    
T  24093242 atgtgaggattttaaaaacatttaatgaaatgtagggactattct 24093198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 17 - 64
Target Start/End: Original strand, 2036604 - 2036651
Alignment:
Q  17 aaaatgtaaggattttaaaaacatttattgaaatgtaaggactattct 64  Q
    ||||| || |||||||||||||||| ||||||||||| ||||||||||    
T  2036604 aaaatatagggattttaaaaacattaattgaaatgtagggactattct 2036651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 17 - 64
Target Start/End: Complemental strand, 3691172 - 3691125
Alignment:
Q  17 aaaatgtaaggattttaaaaacatttattgaaatgtaaggactattct 64  Q
    ||||||| ||||||||||||||||||| ||||||||| | ||||||||    
T  3691172 aaaatgtgaggattttaaaaacatttaatgaaatgtaggaactattct 3691125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 17 - 64
Target Start/End: Complemental strand, 7083611 - 7083564
Alignment:
Q  17 aaaatgtaaggattttaaaaacatttattgaaatgtaaggactattct 64  Q
    ||||||| ||||||||||||| ||||| ||||||||| ||||||||||    
T  7083611 aaaatgtgaggattttaaaaaaatttaatgaaatgtagggactattct 7083564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 53
Target Start/End: Original strand, 22701945 - 22701982
Alignment:
Q  16 aaaaatgtaaggattttaaaaacatttattgaaatgta 53  Q
    ||||||||| |||||||||||||||| |||||||||||    
T  22701945 aaaaatgtagggattttaaaaacattcattgaaatgta 22701982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 64
Target Start/End: Original strand, 24093547 - 24093604
Alignment:
Q  7 taacggaggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactattct 64  Q
    ||||||||  ||||||||||||||||||||||||||| | |||| || | ||||||||    
T  24093547 taacggagataaaatgtaaggattttaaaaacatttaataaaatataggcactattct 24093604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 62
Target Start/End: Complemental strand, 32860903 - 32860858
Alignment:
Q  17 aaaatgtaaggattttaaaaacatttattgaaatgtaaggactatt 62  Q
    ||||||| ||||||||||||||||||| |||||| ||| |||||||    
T  32860903 aaaatgttaggattttaaaaacatttaatgaaatataacgactatt 32860858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 64
Target Start/End: Original strand, 39729597 - 39729654
Alignment:
Q  7 taacggaggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactattct 64  Q
    ||||||||  ||||||| ||||||||||||| ||||| |||||| ||| |||||||||    
T  39729597 taacggagataaaatgtgaggattttaaaaatatttaatgaaatataaagactattct 39729654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 28 - 64
Target Start/End: Original strand, 32114483 - 32114519
Alignment:
Q  28 attttaaaaacatttattgaaatgtaaggactattct 64  Q
    |||||||||| ||||| ||||||||||||||||||||    
T  32114483 attttaaaaatatttaatgaaatgtaaggactattct 32114519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 7 - 70
Target Start/End: Complemental strand, 38110084 - 38110020
Alignment:
Q  7 taacggaggaaaaatgtaaggattttaaaaaca-tttattgaaatgtaaggactattctcaaaat 70  Q
    ||||| |||||| ||| | |||||||||||||| ||||||||||||||   ||||||||||||||    
T  38110084 taacgaaggaaacatgaagggattttaaaaacattttattgaaatgtagaaactattctcaaaat 38110020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085 (Bit Score: 79; Significance: 6e-37; HSPs: 2)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 39837 - 39939
Alignment:
Q  1 ttacgctaacggaggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactattctcaaaattgtacaaaacgtagggaccaaaaacatatt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |   |||| ||||||||||||||||||||    
T  39837 ttacgctaacggaggaaaaatgtaaggattttaaaaacatttattgaaatgtagggactattctcaaaatcgcgtaaaatgtagggaccaaaaacatatt 39936  T
Q  101 taa 103  Q
    |||    
T  39937 taa 39939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 15 - 103
Target Start/End: Complemental strand, 39511 - 39423
Alignment:
Q  15 gaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactattctcaaaattgtacaaaacgtagggaccaaaaacatatttaa 103  Q
    |||||||||| |||||||||||||||||||||||||||| ||| |||||||||||| | | |||| |||||||||||||||||||||||    
T  39511 gaaaaatgtagggattttaaaaacatttattgaaatgtagggattattctcaaaatcgcataaaatgtagggaccaaaaacatatttaa 39423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 79; Significance: 6e-37; HSPs: 45)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 4199557 - 4199455
Alignment:
Q  1 ttacgctaacggaggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactattctcaaaattgtacaaaacgtagggaccaaaaacatatt 100  Q
    ||||||||||||| |||||||||| ||||||||||||||||||||||||| ||||||||||||||||||| || ||||| ||||||||||||||||||||    
T  4199557 ttacgctaacggatgaaaaatgtagggattttaaaaacatttattgaaatataaggactattctcaaaatcgtgcaaaatgtagggaccaaaaacatatt 4199458  T
Q  101 taa 103  Q
    |||    
T  4199457 taa 4199455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 13 - 103
Target Start/End: Original strand, 34950184 - 34950275
Alignment:
Q  13 aggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggact-attctcaaaattgtacaaaacgtagggaccaaaaacatatttaa 103  Q
    |||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||    
T  34950184 aggaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaattgtgcaaaacgtagggaccaaaaacatatttaa 34950275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 46689786 - 46689684
Alignment:
Q  1 ttacgctaacggaggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactattctcaaaattgtacaaaacgtagggaccaaaaacatatt 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||| | | |||| ||||| ||||||||||||||    
T  46689786 ttacgctaacggaggaaaaatgtagggattttaaaaacatttattgaaatgtagggactattctcaaaatcgcataaaatgtaggaaccaaaaacatatt 46689687  T
Q  101 taa 103  Q
    |||    
T  46689686 taa 46689684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 6 - 103
Target Start/End: Original strand, 4199876 - 4199973
Alignment:
Q  6 ctaacggaggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactattctcaaaattgtacaaaacgtagggaccaaaaacatatttaa 103  Q
    |||||||||||||||| || |||||||||||||||||||||||||||| |||||||||||||||| |  ||||| |||||||||||||||||||||||    
T  4199876 ctaacggaggaaaaatatagggattttaaaaacatttattgaaatgtagggactattctcaaaatcgcgcaaaatgtagggaccaaaaacatatttaa 4199973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 6 - 103
Target Start/End: Original strand, 42606701 - 42606798
Alignment:
Q  6 ctaacggaggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactattctcaaaattgtacaaaacgtagggaccaaaaacatatttaa 103  Q
    |||||| |||||||||||| |||||||||||| ||||||||||||||| |||||||||||||||||| | |||| |||||||||||||||||||||||    
T  42606701 ctaacgaaggaaaaatgtagggattttaaaaatatttattgaaatgtagggactattctcaaaattgcataaaatgtagggaccaaaaacatatttaa 42606798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 13 - 103
Target Start/End: Complemental strand, 22406935 - 22406844
Alignment:
Q  13 aggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggact-attctcaaaattgtacaaaacgtagggaccaaaaacatatttaa 103  Q
    |||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||| || ||||||||| |||||||||||||||||||    
T  22406935 aggaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtaaggaccaaaaacatatttaa 22406844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 36899358 - 36899256
Alignment:
Q  1 ttacgctaacggaggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactattctcaaaattgtacaaaacgtagggaccaaaaacatatt 100  Q
    |||| ||||||||| ||||||||| |||||||||||||||||||||||||||| |||||||||||||||| |   |||| ||||||||||||||||||||    
T  36899358 ttacactaacggagaaaaaatgtagggattttaaaaacatttattgaaatgtagggactattctcaaaatcgcgtaaaatgtagggaccaaaaacatatt 36899259  T
Q  101 taa 103  Q
    |||    
T  36899258 taa 36899256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 42606384 - 42606282
Alignment:
Q  1 ttacgctaacggaggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactattctcaaaattgtacaaaacgtagggaccaaaaacatatt 100  Q
    |||||||||||||| ||||||||| |||||||||||||||||||||||||||| |||||||||||||||| |   |||| |||||||||||||||| |||    
T  42606384 ttacgctaacggagaaaaaatgtagggattttaaaaacatttattgaaatgtagggactattctcaaaatcgcgtaaaatgtagggaccaaaaacaaatt 42606285  T
Q  101 taa 103  Q
    |||    
T  42606284 taa 42606282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 45539625 - 45539727
Alignment:
Q  1 ttacgctaacggaggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactattctcaaaattgtacaaaacgtagggaccaaaaacatatt 100  Q
    |||||||||||||| ||||||||| |||||||||||||||||||||||||||| |||||||||| ||||| |   |||| ||||||||||||||||||||    
T  45539625 ttacgctaacggagaaaaaatgtagggattttaaaaacatttattgaaatgtagggactattcttaaaatcgcgtaaaatgtagggaccaaaaacatatt 45539724  T
Q  101 taa 103  Q
    |||    
T  45539725 taa 45539727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 6 - 103
Target Start/End: Original strand, 2389053 - 2389150
Alignment:
Q  6 ctaacggaggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactattctcaaaattgtacaaaacgtagggaccaaaaacatatttaa 103  Q
    |||||| |||||||||||| |||||||||||||||||||| ||||||| |||||||||||||||||| | ||||  ||||||||||||||||||||||    
T  2389053 ctaacgaaggaaaaatgtagggattttaaaaacatttattaaaatgtagggactattctcaaaattgcataaaatatagggaccaaaaacatatttaa 2389150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 6 - 103
Target Start/End: Original strand, 22407264 - 22407361
Alignment:
Q  6 ctaacggaggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactattctcaaaattgtacaaaacgtagggaccaaaaacatatttaa 103  Q
    ||||||||| ||||||||| |||||||||||||||| ||||||||||| |||||||| |||||||||  ||||| |||||||||||||||||||||||    
T  22407264 ctaacggagaaaaaatgtagggattttaaaaacattcattgaaatgtagggactattttcaaaattgcgcaaaatgtagggaccaaaaacatatttaa 22407361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 6 - 103
Target Start/End: Complemental strand, 34949855 - 34949758
Alignment:
Q  6 ctaacggaggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactattctcaaaattgtacaaaacgtagggaccaaaaacatatttaa 103  Q
    ||||||||| ||||||||| |||||||||||||||| ||||||||||| |||||||||||||||| |  ||||| |||||||||||||||||||||||    
T  34949855 ctaacggagaaaaaatgtagggattttaaaaacattcattgaaatgtagggactattctcaaaatcgcgcaaaatgtagggaccaaaaacatatttaa 34949758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 6 - 103
Target Start/End: Original strand, 36899675 - 36899772
Alignment:
Q  6 ctaacggaggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactattctcaaaattgtacaaaacgtagggaccaaaaacatatttaa 103  Q
    |||||| ||||||||| || |||||||||||||||||||||||||||| |||||||||||||||||| | ||||  ||||||||||||||||||||||    
T  36899675 ctaacgaaggaaaaatatagggattttaaaaacatttattgaaatgtagggactattctcaaaattgcataaaatatagggaccaaaaacatatttaa 36899772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 5 - 101
Target Start/End: Complemental strand, 2388732 - 2388636
Alignment:
Q  5 gctaacggaggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactattctcaaaattgtacaaaacgtagggaccaaaaacatattt 101  Q
    |||||||||| ||||||||| ||||||||||||||||||||||||||||  ||||||||||||||| |   |||| |||||||||||||||||||||    
T  2388732 gctaacggagaaaaaatgtagggattttaaaaacatttattgaaatgtagagactattctcaaaatcgcgtaaaatgtagggaccaaaaacatattt 2388636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 13 - 103
Target Start/End: Original strand, 27475726 - 27475817
Alignment:
Q  13 aggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggact-attctcaaaattgtacaaaacgtagggaccaaaaacatatttaa 103  Q
    |||||||||||| ||||||||||||||||||||||||| |||||||| ||||||||||| ||  ||||| ||||||||||||||||||||||    
T  27475726 aggaaaaatgtagggattttaaaaacatttattgaaatataaggactaattctcaaaatcgtgtaaaacttagggaccaaaaacatatttaa 27475817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 15 - 103
Target Start/End: Original strand, 46690112 - 46690200
Alignment:
Q  15 gaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactattctcaaaattgtacaaaacgtagggaccaaaaacatatttaa 103  Q
    |||||||||| |||||||||||||||||||||||||||| ||| |||||||||||| |   |||| |||||||||||||||||||||||    
T  46690112 gaaaaatgtagggattttaaaaacatttattgaaatgtagggattattctcaaaatcgcgtaaaatgtagggaccaaaaacatatttaa 46690200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 20 - 103
Target Start/End: Complemental strand, 27475475 - 27475392
Alignment:
Q  20 atgtaaggattttaaaaacatttattgaaatgtaaggactattctcaaaattgtacaaaacgtagggaccaaaaacatatttaa 103  Q
    ||||| |||||||||||||||| ||||||||||| |||||||||||||||| |  ||||| |||||||||||||||||||||||    
T  27475475 atgtagggattttaaaaacattcattgaaatgtagggactattctcaaaatcgcgcaaaatgtagggaccaaaaacatatttaa 27475392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 6 - 103
Target Start/End: Complemental strand, 45539308 - 45539211
Alignment:
Q  6 ctaacggaggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactattctcaaaattgtacaaaacgtagggaccaaaaacatatttaa 103  Q
    |||||| | |||||||||| |||||||||||||||||||||||||||| |||||||||| ||||| |   |||| |||||||||||||||||| ||||    
T  45539308 ctaacgaatgaaaaatgtagggattttaaaaacatttattgaaatgtagggactattcttaaaatcgcgtaaaatgtagggaccaaaaacataattaa 45539211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 5 - 103
Target Start/End: Original strand, 20831090 - 20831189
Alignment:
Q  5 gctaacggaggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactatt-ctcaaaattgtacaaaacgtagggaccaaaaacatatttaa 103  Q
    |||||||||  ||||||||| |||||||||||||||||||||||||||||||||||||  | |||||   | |||| |||||||||||||||||||||||    
T  20831090 gctaacggataaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgagaaaaaatgtagggaccaaaaacatatttaa 20831189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 9 - 103
Target Start/End: Complemental strand, 20826825 - 20826730
Alignment:
Q  9 acggaggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactatt-ctcaaaattgtacaaaacgtagggaccaaaaacatatttaa 103  Q
    ||||| |||||||||| |||||||||||||||||||||||||||||||||||||  | |||||     |||| |||||||||||||||||||||||    
T  20826825 acggatgaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggaaaaatgtagggaccaaaaacatatttaa 20826730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 5 - 62
Target Start/End: Complemental strand, 35300845 - 35300788
Alignment:
Q  5 gctaacggaggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactatt 62  Q
    ||||||||| |||||||||| |||||||||||||||||||||||||||||||| ||||    
T  35300845 gctaacggatgaaaaatgtagggattttaaaaacatttattgaaatgtaaggattatt 35300788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 8 - 103
Target Start/End: Complemental strand, 54588555 - 54588458
Alignment:
Q  8 aacggaggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactattctcaaaattgtac--aaaacgtagggaccaaaaacatatttaa 103  Q
    |||||||| |||||||| | |||||||||||||||||||||||||| ||||||||||  ||| | | |  |||| ||||||||| |||||||||||||    
T  54588555 aacggaggtaaaatgtaggaattttaaaaacatttattgaaatgtatggactattcttcaaagtctgccaaaaatgtagggaccgaaaacatatttaa 54588458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 7 - 64
Target Start/End: Original strand, 44504377 - 44504434
Alignment:
Q  7 taacggaggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactattct 64  Q
    ||||||||  ||||||| ||||||||||||||||||| ||||||||||||||||||||    
T  44504377 taacggagataaaatgtgaggattttaaaaacatttaatgaaatgtaaggactattct 44504434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 7 - 62
Target Start/End: Complemental strand, 48867749 - 48867694
Alignment:
Q  7 taacggaggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactatt 62  Q
    ||||||| | ||||||||||||||||||||| ||||||||||||||| ||||||||    
T  48867749 taacggaagtaaaatgtaaggattttaaaaatatttattgaaatgtagggactatt 48867694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 17 - 103
Target Start/End: Original strand, 48868588 - 48868675
Alignment:
Q  17 aaaatgtaaggattttaaaaacatttattgaaatgtaaggactatt-ctcaaaattgtacaaaacgtagggaccaaaaacatatttaa 103  Q
    |||||||| |||||||||||||||||||||||||||| ||||||||  ||||| | |  ||||| |||||||| || |||||||||||    
T  48868588 aaaatgtagggattttaaaaacatttattgaaatgtagggactattattcaaagtagcgcaaaatgtagggactaataacatatttaa 48868675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 64
Target Start/End: Original strand, 132062 - 132107
Alignment:
Q  19 aatgtaaggattttaaaaacatttattgaaatgtaaggactattct 64  Q
    ||||| ||||||||||||||||||| ||||||||||||||||||||    
T  132062 aatgtgaggattttaaaaacatttaatgaaatgtaaggactattct 132107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 7 - 64
Target Start/End: Complemental strand, 9217919 - 9217862
Alignment:
Q  7 taacggaggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactattct 64  Q
    ||||||||  ||||||| ||||||||||||||||||| ||||||||| ||||||||||    
T  9217919 taacggagataaaatgtgaggattttaaaaacatttaatgaaatgtagggactattct 9217862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 7 - 64
Target Start/End: Original strand, 51755905 - 51755962
Alignment:
Q  7 taacggaggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactattct 64  Q
    ||||||||  ||||||| ||||||||||||||||||| ||||||||| ||||||||||    
T  51755905 taacggagataaaatgtgaggattttaaaaacatttaatgaaatgtagggactattct 51755962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 17 - 64
Target Start/End: Complemental strand, 22814385 - 22814338
Alignment:
Q  17 aaaatgtaaggattttaaaaacatttattgaaatgtaaggactattct 64  Q
    ||||||| ||||||||||||||||||| ||||||||| ||||||||||    
T  22814385 aaaatgtgaggattttaaaaacatttaatgaaatgtatggactattct 22814338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 62
Target Start/End: Original strand, 7248478 - 7248535
Alignment:
Q  5 gctaacggaggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactatt 62  Q
    ||||||||  |||||||||| |||||||||||| ||||||| |||||| |||||||||    
T  7248478 gctaacggcagaaaaatgtagggattttaaaaatatttattaaaatgtgaggactatt 7248535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 31 - 103
Target Start/End: Complemental strand, 27013657 - 27013584
Alignment:
Q  31 ttaaaaacatttattgaaatgtaaggactattc-tcaaaattgtacaaaacgtagggaccaaaaacatatttaa 103  Q
    |||||||||| |||| ||||||||||||||||| |||||||    ||||| ||| |||||||||||||||||||    
T  27013657 ttaaaaacatatattaaaatgtaaggactattcttcaaaatcacgcaaaatgtaaggaccaaaaacatatttaa 27013584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 7 - 64
Target Start/End: Complemental strand, 44504191 - 44504134
Alignment:
Q  7 taacggaggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactattct 64  Q
    ||||||||  ||||||| ||||||||||||| ||||| ||||||||| ||||||||||    
T  44504191 taacggagataaaatgtgaggattttaaaaatatttaatgaaatgtagggactattct 44504134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 100
Target Start/End: Complemental strand, 25770410 - 25770326
Alignment:
Q  17 aaaatgtaaggattttaaaaacatttattgaaatgtaaggactattc-tcaaaattgtacaaaacgtagggaccaaaaacatatt 100  Q
    ||||||| |||||| |||||||||||| ||||||||| ||||||||| |||||    ||||||| ||| |||| |||||||||||    
T  25770410 aaaatgtgaggattctaaaaacatttaatgaaatgtagggactattcttcaaagggatacaaaatgtaaggactaaaaacatatt 25770326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 62
Target Start/End: Complemental strand, 25770574 - 25770538
Alignment:
Q  26 ggattttaaaaacatttattgaaatgtaaggactatt 62  Q
    ||||||||||||||||||||||||||||| |||||||    
T  25770574 ggattttaaaaacatttattgaaatgtaaagactatt 25770538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 64
Target Start/End: Complemental strand, 51587619 - 51587571
Alignment:
Q  16 aaaaatgtaaggattttaaaaacatttattgaaatgtaaggactattct 64  Q
    |||||| || |||||||||||| |||||||||||||||| |||||||||    
T  51587619 aaaaatatagggattttaaaaatatttattgaaatgtaatgactattct 51587571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 17 - 64
Target Start/End: Complemental strand, 43933529 - 43933482
Alignment:
Q  17 aaaatgtaaggattttaaaaacatttattgaaatgtaaggactattct 64  Q
    ||||||| ||||||||||||| ||||| ||||||||| ||||||||||    
T  43933529 aaaatgtgaggattttaaaaatatttaatgaaatgtagggactattct 43933482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 27 - 61
Target Start/End: Original strand, 131948 - 131982
Alignment:
Q  27 gattttaaaaacatttattgaaatgtaaggactat 61  Q
    ||||||||||||| |||||||||||||||||||||    
T  131948 gattttaaaaacacttattgaaatgtaaggactat 131982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 53
Target Start/End: Complemental strand, 51471434 - 51471388
Alignment:
Q  7 taacggaggaaaaatgtaaggattttaaaaacatttattgaaatgta 53  Q
    ||||||||  ||||||| ||||||||||||||||||| |||||||||    
T  51471434 taacggagataaaatgtgaggattttaaaaacatttaatgaaatgta 51471388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 64
Target Start/End: Original strand, 54589566 - 54589624
Alignment:
Q  7 taacggaggaaaaatgtaaggattttaaaaaca-tttattgaaatgtaaggactattct 64  Q
    |||||||||||||||||| |||||||||||| | ||| ||||||| || ||||||||||    
T  54589566 taacggaggaaaaatgtagggattttaaaaatatttttttgaaatatagggactattct 54589624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 64
Target Start/End: Original strand, 13637771 - 13637828
Alignment:
Q  7 taacggaggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactattct 64  Q
    ||||||||  ||||||| ||||||||||||| ||||| |||||||||  |||||||||    
T  13637771 taacggagataaaatgtgaggattttaaaaatatttaatgaaatgtagagactattct 13637828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 64
Target Start/End: Complemental strand, 27013508 - 27013451
Alignment:
Q  7 taacggaggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactattct 64  Q
    ||||||||  ||||||||||||||||||||||||||| | ||||| | | ||||||||    
T  27013508 taacggagataaaatgtaaggattttaaaaacatttaataaaatgcaggaactattct 27013451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 64
Target Start/End: Complemental strand, 37172180 - 37172123
Alignment:
Q  7 taacggaggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactattct 64  Q
    ||||||||  ||| ||| ||||||||||||||||||| |||||||||  |||||||||    
T  37172180 taacggagataaactgtgaggattttaaaaacatttaatgaaatgtagagactattct 37172123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 64
Target Start/End: Complemental strand, 38485788 - 38485739
Alignment:
Q  15 gaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactattct 64  Q
    |||||||| ||||||||||||||||| || | ||||||| ||||||||||    
T  38485788 gaaaaatgcaaggattttaaaaacatataataaaatgtatggactattct 38485739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 60
Target Start/End: Complemental strand, 44504344 - 44504311
Alignment:
Q  27 gattttaaaaacatttattgaaatgtaaggacta 60  Q
    ||||||||||||||||||||||||| ||||||||    
T  44504344 gattttaaaaacatttattgaaatgcaaggacta 44504311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 17 - 57
Target Start/End: Original strand, 34743471 - 34743511
Alignment:
Q  17 aaaatgtaaggattttaaaaacatttattgaaatgtaagga 57  Q
    ||||||| |||||||| |||||||||| |||||||||||||    
T  34743471 aaaatgtgaggatttttaaaacatttaatgaaatgtaagga 34743511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 75; Significance: 2e-34; HSPs: 41)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 32266587 - 32266485
Alignment:
Q  1 ttacgctaacggaggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactattctcaaaattgtacaaaacgtagggaccaaaaacatatt 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||| |   |||| ||||||||||||||||||||    
T  32266587 ttacgctaacggaggaaaaatgtagggattttaaaaacatttattgaaatgtagggactattctcaaaatcgcgtaaaatgtagggaccaaaaacatatt 32266488  T
Q  101 taa 103  Q
    |||    
T  32266487 taa 32266485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 13 - 103
Target Start/End: Complemental strand, 30427766 - 30427675
Alignment:
Q  13 aggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggact-attctcaaaattgtacaaaacgtagggaccaaaaacatatttaa 103  Q
    |||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||| || |||||||||||||||||||||||||||||    
T  30427766 aggaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaa 30427675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 13 - 103
Target Start/End: Complemental strand, 45230222 - 45230131
Alignment:
Q  13 aggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggact-attctcaaaattgtacaaaacgtagggaccaaaaacatatttaa 103  Q
    |||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||| || |||||||||||||||||||||||||||||    
T  45230222 aggaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatagtgcaaaacgtagggaccaaaaacatatttaa 45230131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 9122789 - 9122687
Alignment:
Q  1 ttacgctaacggaggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactattctcaaaattgtacaaaacgtagggaccaaaaacatatt 100  Q
    |||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |   |||| || |||||||||||||||||    
T  9122789 ttacgctaacggagaaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattctcaaaatcgcgtaaaatgtggggaccaaaaacatatt 9122690  T
Q  101 taa 103  Q
    |||    
T  9122689 taa 9122687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 47410839 - 47410941
Alignment:
Q  1 ttacgctaacggaggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactattctcaaaattgtacaaaacgtagggaccaaaaacatatt 100  Q
    |||||||||||||| ||||||||| |||||||||||||||||||||||||||| |||||||||||||||| |   |||| ||||||||||||||||||||    
T  47410839 ttacgctaacggagaaaaaatgtagggattttaaaaacatttattgaaatgtagggactattctcaaaatcgcgtaaaatgtagggaccaaaaacatatt 47410938  T
Q  101 taa 103  Q
    |||    
T  47410939 taa 47410941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 6 - 103
Target Start/End: Original strand, 46802743 - 46802840
Alignment:
Q  6 ctaacggaggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactattctcaaaattgtacaaaacgtagggaccaaaaacatatttaa 103  Q
    |||||| |||||||||||| |||||||||||||||||||| ||||||| |||||||| ||||||||||| |||| |||||||||||||||||||||||    
T  46802743 ctaacgaaggaaaaatgtagggattttaaaaacatttattaaaatgtagggactattttcaaaattgtataaaatgtagggaccaaaaacatatttaa 46802840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 6 - 103
Target Start/End: Complemental strand, 47410522 - 47410425
Alignment:
Q  6 ctaacggaggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactattctcaaaattgtacaaaacgtagggaccaaaaacatatttaa 103  Q
    |||||| |||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||| | ||||  ||||||||||||||||||||||    
T  47410522 ctaacgaaggaaaaatgtagggattttaaaaacatttattgaaatgtagggactattctcaaaattgcataaaatatagggaccaaaaacatatttaa 47410425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 17968453 - 17968556
Alignment:
Q  1 ttacgctaacggaggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggact-attctcaaaattgtacaaaacgtagggaccaaaaacatat 99  Q
    ||||||||||  |||||||||||| ||||||||||||||||||||||||||||| |||| ||||||||||| || ||||||||| |||||||||||||||    
T  17968453 ttacgctaactcaggaaaaatgtagggattttaaaaacatttattgaaatgtaaagactaattctcaaaatcgtgcaaaacgtatggaccaaaaacatat 17968552  T
Q  100 ttaa 103  Q
    ||||    
T  17968553 ttaa 17968556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 13 - 103
Target Start/End: Original strand, 9123113 - 9123203
Alignment:
Q  13 aggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactattctcaaaattgtacaaaacgtagggaccaaaaacatatttaa 103  Q
    |||||||||||| ||||||||||||||||||||||||||||  ||||||||||||||||| | |||| |||||||||||||||||||||||    
T  9123113 aggaaaaatgtagggattttaaaaacatttattgaaatgtagagactattctcaaaattgcataaaatgtagggaccaaaaacatatttaa 9123203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 40124180 - 40124078
Alignment:
Q  1 ttacgctaacggaggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactattctcaaaattgtacaaaacgtagggaccaaaaacatatt 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||     |||| ||| ||||||||||||||||    
T  40124180 ttacgctaacggaggaaaaatgtagggattttaaaaacatttattgaaatgtagggactattctcaaaatcaagtaaaatgtaaggaccaaaaacatatt 40124081  T
Q  101 taa 103  Q
    |||    
T  40124080 taa 40124078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 6 - 103
Target Start/End: Complemental strand, 17968136 - 17968039
Alignment:
Q  6 ctaacggaggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactattctcaaaattgtacaaaacgtagggaccaaaaacatatttaa 103  Q
    ||||||||| ||||||||| |||||||||||||||| ||||||||||| |||||||||||||||| |  ||||| |||||||||||||||||||||||    
T  17968136 ctaacggagaaaaaatgtagggattttaaaaacattcattgaaatgtagggactattctcaaaatcgcgcaaaatgtagggaccaaaaacatatttaa 17968039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 46802426 - 46802324
Alignment:
Q  1 ttacgctaacggaggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactattctcaaaattgtacaaaacgtagggaccaaaaacatatt 100  Q
    |||||||||| ||||||||||||| ||||||||||||| |||||||||||||| |||||||||||||||| |   |||| || |||||||||||||||||    
T  46802426 ttacgctaacagaggaaaaatgtagggattttaaaaacttttattgaaatgtagggactattctcaaaatcgcgtaaaatgtggggaccaaaaacatatt 46802327  T
Q  101 taa 103  Q
    |||    
T  46802326 taa 46802324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 6 - 103
Target Start/End: Original strand, 30428095 - 30428192
Alignment:
Q  6 ctaacggaggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactattctcaaaattgtacaaaacgtagggaccaaaaacatatttaa 103  Q
    ||||||||| ||||||||| |||||||||||||||| ||||||||||| | |||||||||||||| |  ||||| |||||||||||||||||||||||    
T  30428095 ctaacggagaaaaaatgtagggattttaaaaacattcattgaaatgtaggaactattctcaaaatcgcgcaaaatgtagggaccaaaaacatatttaa 30428192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 6 - 103
Target Start/End: Original strand, 45230551 - 45230648
Alignment:
Q  6 ctaacggaggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactattctcaaaattgtacaaaacgtagggaccaaaaacatatttaa 103  Q
    ||||||||| |||||| || |||||||||||||||| ||||||||||| |||||||||||||||| |  ||||| |||||||||||||||||||||||    
T  45230551 ctaacggagaaaaaatatagggattttaaaaacattcattgaaatgtagggactattctcaaaatcgcgcaaaatgtagggaccaaaaacatatttaa 45230648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 15 - 103
Target Start/End: Original strand, 32266913 - 32267001
Alignment:
Q  15 gaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactattctcaaaattgtacaaaacgtagggaccaaaaacatatttaa 103  Q
    |||||||||| |||||||||||||||||||||||||||| ||| |||||||||||| |   |||| |||||||||||||||||||||||    
T  32266913 gaaaaatgtagggattttaaaaacatttattgaaatgtagggattattctcaaaatcgcgtaaaatgtagggaccaaaaacatatttaa 32267001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 14 - 103
Target Start/End: Complemental strand, 8997432 - 8997342
Alignment:
Q  14 ggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactattctcaaaattgtacaaaacgtagggac-caaaaacatatttaa 103  Q
    ||||||||||| |||||||||||||||||||||||||||| |||||||||||||||| | ||||||  |||||||  ||||||||||||||    
T  8997432 ggaaaaatgtagggattttaaaaacatttattgaaatgtagggactattctcaaaatcgcacaaaatatagggacaaaaaaacatatttaa 8997342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 15 - 103
Target Start/End: Original strand, 40124506 - 40124594
Alignment:
Q  15 gaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactattctcaaaattgtacaaaacgtagggaccaaaaacatatttaa 103  Q
    |||||||||| |||||||||||||||||||||||||||| ||| |||||||||||| |   |||| |||||||||||||| ||||||||    
T  40124506 gaaaaatgtagggattttaaaaacatttattgaaatgtagggattattctcaaaatcgcgtaaaatgtagggaccaaaaatatatttaa 40124594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 17 - 103
Target Start/End: Original strand, 37717797 - 37717883
Alignment:
Q  17 aaaatgtaaggattttaaaaacatttattgaaatgtaaggactattctcaaaattgtacaaaacgtagggaccaaaaacatatttaa 103  Q
    |||| ||||||||||||||||| ||||||||||||||||||||||| ||||| |||   |||| |||||||| ||||||||||||||    
T  37717797 aaaaagtaaggattttaaaaacctttattgaaatgtaaggactattttcaaagttgcgtaaaatgtagggactaaaaacatatttaa 37717883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 15 - 103
Target Start/End: Original strand, 1500980 - 1501069
Alignment:
Q  15 gaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactattc-tcaaaattgtacaaaacgtagggaccaaaaacatatttaa 103  Q
    |||||||||| |||||||||||||||||| ||||||||| ||||||||| ||||||  |  |||||  ||||||| ||||||||||||||    
T  1500980 gaaaaatgtagggattttaaaaacatttaatgaaatgtagggactattcttcaaaagagcgcaaaatatagggactaaaaacatatttaa 1501069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 26 - 103
Target Start/End: Original strand, 3591174 - 3591252
Alignment:
Q  26 ggattttaaaaacatttattgaaatgtaaggacta-ttctcaaaattgtacaaaacgtagggaccaaaaacatatttaa 103  Q
    ||||||||||||||||||||||||||||||||||| || ||||| |    || || |||||||||||||||||||||||    
T  3591174 ggattttaaaaacatttattgaaatgtaaggactatttttcaaagtcacgcacaatgtagggaccaaaaacatatttaa 3591252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 17 - 64
Target Start/End: Complemental strand, 5172834 - 5172787
Alignment:
Q  17 aaaatgtaaggattttaaaaacatttattgaaatgtaaggactattct 64  Q
    ||||||||||||||||||||||||||| |||||||||  |||||||||    
T  5172834 aaaatgtaaggattttaaaaacatttaatgaaatgtagagactattct 5172787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 26 - 64
Target Start/End: Original strand, 12869664 - 12869702
Alignment:
Q  26 ggattttaaaaacatttattgaaatgtaaggactattct 64  Q
    |||||||||||||||||||||||||||| ||||||||||    
T  12869664 ggattttaaaaacatttattgaaatgtagggactattct 12869702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 64
Target Start/End: Original strand, 36793564 - 36793622
Alignment:
Q  6 ctaacggaggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactattct 64  Q
    ||||||||  ||||||||| |||||||||||||||||||| |||||||  |||||||||    
T  36793564 ctaacggaataaaaatgtagggattttaaaaacatttattaaaatgtagagactattct 36793622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 7 - 64
Target Start/End: Complemental strand, 45664786 - 45664729
Alignment:
Q  7 taacggaggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactattct 64  Q
    |||||||| ||||||||  |||||||||||||||||||| |||||||  |||||||||    
T  45664786 taacggagtaaaaatgtggggattttaaaaacatttattaaaatgtagagactattct 45664729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 8998220 - 8998264
Alignment:
Q  1 ttacgctaacggaggaaaaatgtaaggattttaaaaacatttatt 45  Q
    ||||||||||| ||||||| |||| ||||||||||||||||||||    
T  8998220 ttacgctaacgaaggaaaactgtagggattttaaaaacatttatt 8998264  T

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Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 17 - 64
Target Start/End: Original strand, 3591338 - 3591385
Alignment:
Q  17 aaaatgtaaggattttaaaaacatttattgaaatgtaaggactattct 64  Q
    ||||||| ||||||||||||||||||| | ||||||| ||||||||||    
T  3591338 aaaatgtgaggattttaaaaacatttaataaaatgtatggactattct 3591385  T

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Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 17 - 64
Target Start/End: Original strand, 6751354 - 6751401
Alignment:
Q  17 aaaatgtaaggattttaaaaacatttattgaaatgtaaggactattct 64  Q
    ||||||| ||||||||||||| ||||| ||||||||||||||| ||||    
T  6751354 aaaatgtgaggattttaaaaaaatttaatgaaatgtaaggacttttct 6751401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 12868538 - 12868475
Alignment:
Q  1 ttacgctaacggaggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactattct 64  Q
    |||| ||||||||  | ||||||| |||||||||||| ||||||||||||||| | ||||||||    
T  12868538 ttaccctaacggaatataaatgtagggattttaaaaatatttattgaaatgtaggaactattct 12868475  T

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Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 7 - 62
Target Start/End: Complemental strand, 18179978 - 18179923
Alignment:
Q  7 taacggaggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactatt 62  Q
    ||||||||  ||||||| ||||||||||||||| ||| |||||| |||||||||||    
T  18179978 taacggagataaaatgtgaggattttaaaaacaattaatgaaatataaggactatt 18179923  T

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Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 5 - 103
Target Start/End: Original strand, 45665930 - 45666029
Alignment:
Q  5 gctaacggaggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggacta-ttctcaaaattgtacaaaacgtagggaccaaaaacatatttaa 103  Q
    |||||||||| ||||  ||| |||||||||||| ||||||||||| ||||| |||| || | |||   | |||||| ||||||||||| |||||||||||    
T  45665930 gctaacggagtaaaacagtagggattttaaaaatatttattgaaacgtaagaactattttttaaaggagcacaaaatgtagggaccaataacatatttaa 45666029  T

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Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 17 - 64
Target Start/End: Complemental strand, 47541607 - 47541560
Alignment:
Q  17 aaaatgtaaggattttaaaaacatttattgaaatgtaaggactattct 64  Q
    ||||||| ||||||||||||||||||| |||||| || ||||||||||    
T  47541607 aaaatgtgaggattttaaaaacatttaatgaaatatagggactattct 47541560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 25 - 64
Target Start/End: Complemental strand, 48155054 - 48155015
Alignment:
Q  25 aggattttaaaaacatttattgaaatgtaaggactattct 64  Q
    ||||||||||||||||||| | ||||||||||||||||||    
T  48155054 aggattttaaaaacatttaataaaatgtaaggactattct 48155015  T

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Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 17 - 64
Target Start/End: Original strand, 50359440 - 50359487
Alignment:
Q  17 aaaatgtaaggattttaaaaacatttattgaaatgtaaggactattct 64  Q
    ||||||| ||||||||||||||||||| ||||||  ||||||||||||    
T  50359440 aaaatgtgaggattttaaaaacatttaatgaaataaaaggactattct 50359487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 64
Target Start/End: Complemental strand, 36792339 - 36792282
Alignment:
Q  6 ctaacggaggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactattct 64  Q
    ||||||||| ||||||||| ||||||| ||||||||||||||||| || ||| ||||||    
T  36792339 ctaacggagtaaaaatgtagggatttt-aaaacatttattgaaatatagggattattct 36792282  T

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Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 64
Target Start/End: Complemental strand, 1500150 - 1500101
Alignment:
Q  15 gaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactattct 64  Q
    ||||||| || |||||||||||||||| | ||||||||| ||||||||||    
T  1500150 gaaaaatatagggattttaaaaacattcaatgaaatgtagggactattct 1500101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 62
Target Start/End: Complemental strand, 5683250 - 5683205
Alignment:
Q  17 aaaatgtaaggattttaaaaacatttattgaaatgtaaggactatt 62  Q
    ||||||| ||||||||||| ||||||| ||||||||| ||||||||    
T  5683250 aaaatgtgaggattttaaatacatttaatgaaatgtagggactatt 5683205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 64
Target Start/End: Original strand, 18180269 - 18180326
Alignment:
Q  7 taacggaggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactattct 64  Q
    ||||||||  ||||| | ||||||||||||||||||| | ||||||| ||||||||||    
T  18180269 taacggagataaaatatgaggattttaaaaacatttaataaaatgtatggactattct 18180326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 64
Target Start/End: Complemental strand, 19895499 - 19895442
Alignment:
Q  7 taacggaggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactattct 64  Q
    ||||||||  ||||||| ||| ||||||||||||||| | ||||||| ||||||||||    
T  19895499 taacggagataaaatgtgagggttttaaaaacatttaattaaatgtatggactattct 19895442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 72
Target Start/End: Original strand, 36297541 - 36297606
Alignment:
Q  7 taacggaggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactattctcaaaattg 72  Q
    ||||||||||||||| ||   |||||||||| ||||||| ||||||| ||| |||| |||||||||    
T  36297541 taacggaggaaaaatatagaaattttaaaaatatttattaaaatgtagggaatattttcaaaattg 36297606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 17 - 53
Target Start/End: Complemental strand, 9880573 - 9880537
Alignment:
Q  17 aaaatgtaaggattttaaaaacatttattgaaatgta 53  Q
    ||||||| ||||||||||||||||||| |||||||||    
T  9880573 aaaatgtgaggattttaaaaacatttaatgaaatgta 9880537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 62
Target Start/End: Complemental strand, 19895653 - 19895617
Alignment:
Q  26 ggattttaaaaacatttattgaaatgtaaggactatt 62  Q
    |||||||||||||||||||||||||| || |||||||    
T  19895653 ggattttaaaaacatttattgaaatgcaaagactatt 19895617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148 (Bit Score: 52; Significance: 8e-21; HSPs: 2)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 5 - 103
Target Start/End: Complemental strand, 29375 - 29276
Alignment:
Q  5 gctaacggaggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactatt-ctcaaaattgtacaaaacgtagggaccaaaaacatatttaa 103  Q
    ||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||  | |||||    ||||| ||||||||||| |||||||||||    
T  29375 gctaacggatgaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgtagggaccaataacatatttaa 29276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148; HSP #2
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 5 - 103
Target Start/End: Original strand, 32983 - 33082
Alignment:
Q  5 gctaacggaggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactatt-ctcaaaattgtacaaaacgtagggaccaaaaacatatttaa 103  Q
    |||||||||  ||||||||| |||||||||||||||||||||||||||||||||||||  | |||||    ||||| |||||||||||||||||||||||    
T  32983 gctaacggataaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgtagggaccaaaaacatatttaa 33082  T

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Target: scaffold0009 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 3)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 27 - 103
Target Start/End: Complemental strand, 107974 - 107897
Alignment:
Q  27 gattttaaaaacatttattgaaatgtaaggacta-ttctcaaaattgtacaaaacgtagggaccaaaaacatatttaa 103  Q
    |||||||||||||||||||||||||||||||||| || |||||||     |||| |||||||||||||||||||||||    
T  107974 gattttaaaaacatttattgaaatgtaaggactatttttcaaaatcacggaaaatgtagggaccaaaaacatatttaa 107897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 7 - 64
Target Start/End: Complemental strand, 107821 - 107764
Alignment:
Q  7 taacggaggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactattct 64  Q
    ||||||||  ||||||| ||||||||||||| ||||||||||||||| ||||||||||    
T  107821 taacggagataaaatgtgaggattttaaaaatatttattgaaatgtagggactattct 107764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 53
Target Start/End: Original strand, 108113 - 108159
Alignment:
Q  7 taacggaggaaaaatgtaaggattttaaaaacatttattgaaatgta 53  Q
    ||||||||  ||||||| ||||||||||||||||||| |||||||||    
T  108113 taacggagataaaatgtgaggattttaaaaacatttaatgaaatgta 108159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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