View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11922_high_13 (Length: 266)
Name: NF11922_high_13
Description: NF11922
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11922_high_13 |
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Alignment Details
Target: chr8 (Bit Score: 236; Significance: 1e-130; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 1 - 248
Target Start/End: Complemental strand, 420971 - 420724
Alignment:
| Q |
1 |
ctatgcttctcaagctatgttatccgacaactaccttaacggacctggtggtggacccaccatcgacataaacagtggtgattttactcatcaccacaac |
100 |
Q |
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| T |
420971 |
ctatgcttctcaagctatgttatccgacaactaccttaacggacctggtggtggacccaccatcgacataaacagtggtgattttactcatcaccacaac |
420872 |
T |
|
| Q |
101 |
cagtttagcccacacgcccagcagcaccataatatccatcagtccttcttcgacccacgggcttttcatggagggtcatcaactgcttcttcttaccctc |
200 |
Q |
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||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
420871 |
cagtttagcccacacaaccagcagcaccataatatccatcagtccttcttcgacccacgggcttttcatggagggtcatcaactgcttcttcttaccctc |
420772 |
T |
|
| Q |
201 |
cacctcaaccacaacctccaccttccatgctctcccttgaccctcttc |
248 |
Q |
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||||||||||||||||||| |||||||||||||||||||||||||||| |
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| T |
420771 |
cacctcaaccacaacctcctccttccatgctctcccttgaccctcttc |
420724 |
T |
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