View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11922_low_18 (Length: 209)

Name: NF11922_low_18
Description: NF11922
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11922_low_18
NF11922_low_18
[»] chr8 (34 HSPs)
chr8 (1-127)||(37168495-37168621)
chr8 (125-209)||(1958206-1958291)
chr8 (123-209)||(35931820-35931907)
chr8 (119-208)||(43524418-43524508)
chr8 (125-209)||(45101051-45101136)
chr8 (123-209)||(15053590-15053677)
chr8 (125-209)||(12272508-12272593)
chr8 (160-208)||(40283470-40283519)
chr8 (123-207)||(43525117-43525202)
chr8 (150-208)||(26244482-26244541)
chr8 (160-209)||(17741707-17741757)
chr8 (160-209)||(41477178-41477228)
chr8 (168-209)||(18029525-18029567)
chr8 (168-209)||(34955692-34955734)
chr8 (160-209)||(35099430-35099480)
chr8 (160-209)||(36912412-36912462)
chr8 (160-209)||(43618375-43618425)
chr8 (161-209)||(31129529-31129578)
chr8 (169-209)||(42859929-42859970)
chr8 (160-207)||(8610009-8610057)
chr8 (170-209)||(13814952-13814992)
chr8 (123-202)||(38207053-38207133)
chr8 (150-208)||(13947351-13947410)
chr8 (168-209)||(5212294-5212336)
chr8 (160-209)||(26632179-26632229)
chr8 (160-209)||(30470844-30470894)
chr8 (160-209)||(38584920-38584970)
chr8 (168-205)||(42860717-42860755)
chr8 (123-208)||(7511884-7511969)
chr8 (161-209)||(23353209-23353258)
chr8 (169-209)||(44503171-44503212)
chr8 (173-208)||(1634868-1634904)
chr8 (160-207)||(24431891-24431939)
chr8 (150-201)||(29731680-29731732)
[»] chr5 (31 HSPs)
chr5 (122-209)||(40888851-40888939)
chr5 (125-209)||(32976602-32976687)
chr5 (125-209)||(19241276-19241361)
chr5 (121-209)||(27942447-27942536)
chr5 (123-208)||(25670933-25671019)
chr5 (125-209)||(42317848-42317933)
chr5 (125-209)||(42807026-42807111)
chr5 (122-209)||(7650960-7651048)
chr5 (150-208)||(3454721-3454780)
chr5 (149-209)||(41153032-41153093)
chr5 (123-209)||(31008411-31008499)
chr5 (160-209)||(8176329-8176379)
chr5 (160-209)||(31013870-31013920)
chr5 (160-209)||(41263357-41263407)
chr5 (125-209)||(14278789-14278874)
chr5 (121-204)||(4219472-4219556)
chr5 (149-208)||(13479851-13479911)
chr5 (123-209)||(27407069-27407156)
chr5 (150-208)||(29619041-29619100)
chr5 (123-209)||(36572446-36572533)
chr5 (150-208)||(39008465-39008524)
chr5 (150-208)||(39238399-39238458)
chr5 (168-209)||(4577008-4577050)
chr5 (160-201)||(9274483-9274525)
chr5 (160-209)||(25032348-25032398)
chr5 (164-209)||(25652812-25652858)
chr5 (126-207)||(32363643-32363725)
chr5 (119-207)||(37882457-37882546)
chr5 (125-208)||(23089478-23089562)
chr5 (163-209)||(27407772-27407819)
chr5 (125-209)||(30648139-30648224)
[»] chr7 (26 HSPs)
chr7 (123-209)||(36518474-36518561)
chr7 (121-209)||(47159521-47159609)
chr7 (125-209)||(33078811-33078896)
chr7 (129-209)||(37887812-37887893)
chr7 (125-209)||(42881319-42881404)
chr7 (122-209)||(40302517-40302605)
chr7 (150-208)||(39769715-39769774)
chr7 (149-209)||(30566585-30566646)
chr7 (122-209)||(30720078-30720166)
chr7 (126-209)||(37951709-37951793)
chr7 (160-209)||(22737621-22737671)
chr7 (149-209)||(28318069-28318130)
chr7 (120-208)||(45549646-45549735)
chr7 (160-209)||(114486-114536)
chr7 (160-209)||(5813094-5813144)
chr7 (168-209)||(21654850-21654892)
chr7 (168-209)||(22191224-22191266)
chr7 (163-209)||(25218834-25218881)
chr7 (162-208)||(32130298-32130345)
chr7 (126-207)||(22656629-22656711)
chr7 (160-209)||(35029135-35029185)
chr7 (160-201)||(38970027-38970069)
chr7 (168-209)||(48984911-48984953)
chr7 (160-208)||(32748793-32748842)
chr7 (161-209)||(43571120-43571169)
chr7 (150-201)||(20354209-20354261)
[»] chr2 (31 HSPs)
chr2 (119-209)||(7588531-7588622)
chr2 (123-209)||(14382927-14383014)
chr2 (121-208)||(17929283-17929371)
chr2 (122-209)||(22351641-22351729)
chr2 (161-209)||(6362952-6363000)
chr2 (150-208)||(17485804-17485863)
chr2 (147-209)||(43021725-43021788)
chr2 (125-209)||(1073110-1073195)
chr2 (160-208)||(1308725-1308774)
chr2 (122-209)||(7763514-7763603)
chr2 (125-209)||(36526783-36526868)
chr2 (160-209)||(8852054-8852104)
chr2 (160-209)||(12855016-12855066)
chr2 (160-209)||(24997077-24997127)
chr2 (160-209)||(30822610-30822660)
chr2 (160-209)||(37245498-37245548)
chr2 (123-204)||(38997290-38997372)
chr2 (123-207)||(14152096-14152181)
chr2 (123-209)||(44279952-44280039)
chr2 (160-209)||(927918-927968)
chr2 (160-209)||(1987116-1987166)
chr2 (160-209)||(4296798-4296848)
chr2 (160-209)||(38901717-38901767)
chr2 (150-209)||(5146738-5146798)
chr2 (150-205)||(36209505-36209561)
chr2 (150-209)||(39490130-39490190)
chr2 (160-209)||(6333404-6333454)
chr2 (168-209)||(9074251-9074293)
chr2 (172-209)||(31193010-31193048)
chr2 (121-209)||(9117770-9117859)
chr2 (160-207)||(39434040-39434088)
[»] chr4 (39 HSPs)
chr4 (125-209)||(34199295-34199380)
chr4 (125-209)||(6290561-6290646)
chr4 (121-209)||(40720992-40721081)
chr4 (125-209)||(56053978-56054063)
chr4 (122-209)||(3618479-3618567)
chr4 (123-209)||(33523229-33523316)
chr4 (125-209)||(3533333-3533418)
chr4 (125-209)||(23540452-23540537)
chr4 (122-209)||(48506632-48506720)
chr4 (123-209)||(8991742-8991829)
chr4 (150-208)||(17329940-17329998)
chr4 (121-205)||(33604614-33604699)
chr4 (125-209)||(55560505-55560590)
chr4 (126-209)||(38173517-38173601)
chr4 (125-208)||(45081439-45081523)
chr4 (126-207)||(33077901-33077983)
chr4 (160-209)||(47750251-47750300)
chr4 (122-209)||(28899290-28899378)
chr4 (125-208)||(48403927-48404011)
chr4 (150-208)||(4981495-4981554)
chr4 (150-208)||(35809149-35809208)
chr4 (123-208)||(19272743-19272828)
chr4 (160-209)||(46917537-46917587)
chr4 (160-209)||(54356922-54356972)
chr4 (149-209)||(16020832-16020893)
chr4 (125-208)||(13094417-13094501)
chr4 (119-209)||(31336380-31336471)
chr4 (160-209)||(2215308-2215358)
chr4 (160-209)||(12158134-12158184)
chr4 (160-205)||(39049113-39049159)
chr4 (123-207)||(39113783-39113868)
chr4 (122-209)||(13110519-13110607)
chr4 (122-209)||(16175041-16175129)
chr4 (172-209)||(31848800-31848838)
chr4 (128-209)||(52017308-52017390)
chr4 (149-207)||(52772739-52772797)
chr4 (168-209)||(53184122-53184164)
chr4 (160-208)||(23389956-23390005)
chr4 (160-203)||(33526713-33526757)
[»] chr3 (53 HSPs)
chr3 (125-209)||(30418455-30418540)
chr3 (125-209)||(50733978-50734063)
chr3 (125-209)||(50778792-50778877)
chr3 (121-209)||(51999263-51999352)
chr3 (123-209)||(50415856-50415943)
chr3 (125-209)||(29701644-29701729)
chr3 (122-209)||(44084268-44084356)
chr3 (125-209)||(32120464-32120549)
chr3 (125-209)||(43473852-43473937)
chr3 (122-209)||(6048722-6048810)
chr3 (125-208)||(26165581-26165665)
chr3 (123-209)||(37183863-37183950)
chr3 (149-209)||(4045966-4046027)
chr3 (125-209)||(27847371-27847456)
chr3 (122-209)||(7008014-7008102)
chr3 (138-209)||(12974643-12974715)
chr3 (123-209)||(41183234-41183321)
chr3 (122-207)||(10426459-10426545)
chr3 (125-209)||(46572951-46573036)
chr3 (149-208)||(35472653-35472713)
chr3 (125-203)||(6832346-6832425)
chr3 (160-209)||(17466512-17466562)
chr3 (160-209)||(25790801-25790851)
chr3 (160-209)||(42601758-42601808)
chr3 (160-209)||(47144170-47144220)
chr3 (160-209)||(49147314-49147364)
chr3 (149-209)||(42560887-42560948)
chr3 (150-208)||(11908006-11908065)
chr3 (123-209)||(38572180-38572267)
chr3 (160-209)||(5845166-5845216)
chr3 (168-209)||(33934996-33935038)
chr3 (160-209)||(35424035-35424085)
chr3 (160-209)||(41890532-41890581)
chr3 (168-209)||(42601531-42601573)
chr3 (168-209)||(49823196-49823238)
chr3 (168-209)||(51427105-51427147)
chr3 (161-209)||(138973-139022)
chr3 (124-208)||(52000089-52000174)
chr3 (121-209)||(55026697-55026786)
chr3 (122-209)||(20139319-20139407)
chr3 (172-209)||(744225-744263)
chr3 (160-209)||(25450660-25450710)
chr3 (168-209)||(25832750-25832792)
chr3 (159-208)||(36178731-36178781)
chr3 (125-183)||(48887034-48887092)
chr3 (160-205)||(50017050-50017096)
chr3 (172-209)||(30692438-30692475)
chr3 (161-209)||(35853218-35853267)
chr3 (161-209)||(42258315-42258364)
chr3 (161-209)||(43022646-43022695)
chr3 (161-201)||(47701097-47701138)
chr3 (161-209)||(49710415-49710464)
chr3 (172-207)||(33748694-33748730)
[»] chr6 (17 HSPs)
chr6 (125-209)||(34838541-34838626)
chr6 (122-209)||(8669847-8669935)
chr6 (121-207)||(24348389-24348476)
chr6 (125-209)||(10883832-10883917)
chr6 (121-209)||(30446200-30446289)
chr6 (122-209)||(8660516-8660604)
chr6 (160-209)||(29428544-29428594)
chr6 (160-209)||(197799-197849)
chr6 (160-209)||(631513-631563)
chr6 (150-208)||(24933311-24933369)
chr6 (121-209)||(12480273-12480362)
chr6 (168-209)||(6380515-6380557)
chr6 (160-209)||(17961290-17961340)
chr6 (160-209)||(34328276-34328326)
chr6 (121-209)||(12501788-12501877)
chr6 (161-207)||(22627832-22627879)
chr6 (161-209)||(6725651-6725700)
[»] chr1 (33 HSPs)
chr1 (125-209)||(51494498-51494583)
chr1 (125-209)||(2478354-2478439)
chr1 (123-209)||(29919326-29919413)
chr1 (125-209)||(23092727-23092812)
chr1 (125-209)||(45456177-45456262)
chr1 (125-209)||(45623556-45623641)
chr1 (125-209)||(48388134-48388219)
chr1 (122-209)||(14096646-14096734)
chr1 (160-209)||(8464092-8464142)
chr1 (160-209)||(44334282-44334332)
chr1 (121-209)||(8468278-8468367)
chr1 (161-209)||(19578936-19578985)
chr1 (121-209)||(30878570-30878659)
chr1 (125-209)||(31159345-31159430)
chr1 (121-209)||(37691316-37691404)
chr1 (125-209)||(48404288-48404373)
chr1 (123-206)||(37822525-37822609)
chr1 (159-209)||(29523695-29523746)
chr1 (150-208)||(35847148-35847207)
chr1 (160-209)||(31468126-31468176)
chr1 (160-209)||(41542323-41542373)
chr1 (160-209)||(45239131-45239181)
chr1 (160-209)||(3755054-3755104)
chr1 (160-209)||(17783370-17783420)
chr1 (160-209)||(27630486-27630536)
chr1 (160-209)||(37420370-37420420)
chr1 (168-209)||(44451296-44451338)
chr1 (168-209)||(44651074-44651116)
chr1 (129-209)||(36230319-36230400)
chr1 (168-209)||(643848-643890)
chr1 (141-209)||(17681288-17681358)
chr1 (169-209)||(20584877-20584918)
chr1 (170-209)||(37646586-37646626)
[»] scaffold0362 (1 HSPs)
scaffold0362 (125-205)||(5353-5434)
[»] scaffold0054 (1 HSPs)
scaffold0054 (161-209)||(57769-57818)
[»] scaffold0012 (1 HSPs)
scaffold0012 (160-207)||(124011-124059)
[»] scaffold0100 (1 HSPs)
scaffold0100 (160-209)||(30564-30614)
[»] scaffold0016 (1 HSPs)
scaffold0016 (170-208)||(66099-66138)


Alignment Details
Target: chr8 (Bit Score: 111; Significance: 3e-56; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 37168495 - 37168621
Alignment:
Q  1 tcattgtcaccacaatgtaaatatcatgaatttcttatttattcactctttgttctattactaacttggtgcgtagatatgtttggtggatggttcgata 100  Q
    ||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  37168495 tcattgtcaccacaatgtaaacatcatgtatttcttatttattcactctttgttctattactaacttggtgcgtagatatgtttggtggatggtttgata 37168594  T
Q  101 gcaaaaaatgatccaatgaatcttaga 127  Q
    || ||||||||||||||||||||||||    
T  37168595 gcgaaaaatgatccaatgaatcttaga 37168621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 125 - 209
Target Start/End: Complemental strand, 1958291 - 1958206
Alignment:
Q  125 agaccatttacagtggttaaatatattcaataatcttcaacatccactttttcaatt-ccaacactccacatcattttctctctct 209  Q
    |||||||||||| |||| ||||| ||||||||| |||||||| |||||||||||||| ||||||||||||||||||||||||||||    
T  1958291 agaccatttacaatggtaaaatacattcaataaccttcaacacccactttttcaattcccaacactccacatcattttctctctct 1958206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 123 - 209
Target Start/End: Original strand, 35931820 - 35931907
Alignment:
Q  123 ttagaccatttacagtggttaaatatattcaataatcttcaacatccactttttcaa-ttccaacactccacatcattttctctctct 209  Q
    |||||||||||||| |||| ||| | |||||| || ||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  35931820 ttagaccatttacaatggtaaaacaaattcaacaaccttcaacatccactttttcaatttccaacactccacatcattttctctctct 35931907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 119 - 208
Target Start/End: Complemental strand, 43524508 - 43524418
Alignment:
Q  119 aatcttagaccatttacagtggttaaatatattcaataatcttcaacatccactttttcaatt-ccaacactccacatcattttctctctc 208  Q
    ||||||||||||| |||| |||||||| |  |||||||  ||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  43524508 aatcttagaccatgtacaatggttaaaaaatttcaatacccttcaacatccactttttcaattcccaacactccacatcattttctctctc 43524418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 125 - 209
Target Start/End: Complemental strand, 45101136 - 45101051
Alignment:
Q  125 agaccatttacagtggttaaatatattcaataatcttcaacatccactttttcaatt-ccaacactccacatcattttctctctct 209  Q
    |||||||||||| |||  |||||||||||| || | |||||| |||||||||||||| ||||||||||||||||||||||||||||    
T  45101136 agaccatttacaatggcaaaatatattcaacaaccctcaacacccactttttcaattcccaacactccacatcattttctctctct 45101051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 123 - 209
Target Start/End: Original strand, 15053590 - 15053677
Alignment:
Q  123 ttagaccatttacagtggttaaatatattcaataatcttcaacatccactttttcaatt-ccaacactccacatcattttctctctct 209  Q
    |||||||||||||| |||| | | |||||||| |||| |||||| |||||||||||||| |||||||||| |||||||||||||||||    
T  15053590 ttagaccatttacaatggtcacaaatattcaacaatcatcaacacccactttttcaattcccaacactccgcatcattttctctctct 15053677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 125 - 209
Target Start/End: Complemental strand, 12272593 - 12272508
Alignment:
Q  125 agaccatttacagtggttaaatatattcaataatcttcaacatccactttttcaa-ttccaacactccacatcattttctctctct 209  Q
    |||| ||||||| |||| ||||| |||||| || | ||||||||||||||||||| || ||||||||||| |||||||||||||||    
T  12272593 agactatttacaatggtaaaataaattcaacaaccctcaacatccactttttcaattttcaacactccacttcattttctctctct 12272508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 160 - 208
Target Start/End: Original strand, 40283470 - 40283519
Alignment:
Q  160 ttcaacatccactttttcaattcc-aacactccacatcattttctctctc 208  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  40283470 ttcaacatccactttttcaattcccaacactccacatcattttctctctc 40283519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 123 - 207
Target Start/End: Complemental strand, 43525202 - 43525117
Alignment:
Q  123 ttagaccatttacagtggttaaatatattcaataatcttcaacatccactttttcaatt-ccaacactccacatcattttctctct 207  Q
    |||||||||||||  |||| ||| | |||||| || | |||||| |||||||||||||| ||||||||||||||||||||||||||    
T  43525202 ttagaccatttacgatggtaaaacaaattcaacaaccctcaacacccactttttcaatttccaacactccacatcattttctctct 43525117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 150 - 208
Target Start/End: Original strand, 26244482 - 26244541
Alignment:
Q  150 ttcaataatcttcaacatccactttttcaattcc-aacactccacatcattttctctctc 208  Q
    |||||||  ||||||||| ||||||||||||||| |||||||||||||||||||||||||    
T  26244482 ttcaatacccttcaacattcactttttcaattcccaacactccacatcattttctctctc 26244541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 160 - 209
Target Start/End: Original strand, 17741707 - 17741757
Alignment:
Q  160 ttcaacatccactttttcaatt-ccaacactccacatcattttctctctct 209  Q
    |||||||||||||||||||||| |||| |||||||||||||||||||||||    
T  17741707 ttcaacatccactttttcaattcccaagactccacatcattttctctctct 17741757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 160 - 209
Target Start/End: Original strand, 41477178 - 41477228
Alignment:
Q  160 ttcaacatccactttttcaatt-ccaacactccacatcattttctctctct 209  Q
    |||||||||||||||||||||| |||||||||||| |||||||||||||||    
T  41477178 ttcaacatccactttttcaattcccaacactccacgtcattttctctctct 41477228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 168 - 209
Target Start/End: Complemental strand, 18029567 - 18029525
Alignment:
Q  168 ccactttttcaattcc-aacactccacatcattttctctctct 209  Q
    |||||||||||||||| ||||||||||||||||||||||||||    
T  18029567 ccactttttcaattcccaacactccacatcattttctctctct 18029525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 168 - 209
Target Start/End: Complemental strand, 34955734 - 34955692
Alignment:
Q  168 ccactttttcaattcc-aacactccacatcattttctctctct 209  Q
    |||||||||||||||| ||||||||||||||||||||||||||    
T  34955734 ccactttttcaattcccaacactccacatcattttctctctct 34955692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 160 - 209
Target Start/End: Original strand, 35099430 - 35099480
Alignment:
Q  160 ttcaacatccactttttcaattcc-aacactccacatcattttctctctct 209  Q
    ||||||| |||||||||||||||| ||||||| ||||||||||||||||||    
T  35099430 ttcaacacccactttttcaattcccaacactctacatcattttctctctct 35099480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 160 - 209
Target Start/End: Original strand, 36912412 - 36912462
Alignment:
Q  160 ttcaacatccactttttcaattcc-aacactccacatcattttctctctct 209  Q
    ||||||| |||||||||||||||| ||||||| ||||||||||||||||||    
T  36912412 ttcaacacccactttttcaattcccaacactctacatcattttctctctct 36912462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 160 - 209
Target Start/End: Complemental strand, 43618425 - 43618375
Alignment:
Q  160 ttcaacatccactttttcaattcc-aacactccacatcattttctctctct 209  Q
    ||||||| ||||||| |||||||| ||||||||||||||||||||||||||    
T  43618425 ttcaacacccactttatcaattcccaacactccacatcattttctctctct 43618375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 161 - 209
Target Start/End: Complemental strand, 31129578 - 31129529
Alignment:
Q  161 tcaacatccactttttcaattc-caacactccacatcattttctctctct 209  Q
    |||||| | ||||||||||||| |||||||||||||||||||||||||||    
T  31129578 tcaacaccaactttttcaattctcaacactccacatcattttctctctct 31129529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 169 - 209
Target Start/End: Original strand, 42859929 - 42859970
Alignment:
Q  169 cactttttcaattcc-aacactccacatcattttctctctct 209  Q
    ||||||||||||||| ||||||||||||||||||||||||||    
T  42859929 cactttttcaattcccaacactccacatcattttctctctct 42859970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 160 - 207
Target Start/End: Complemental strand, 8610057 - 8610009
Alignment:
Q  160 ttcaacatccactttttcaattcc-aacactccacatcattttctctct 207  Q
    |||||||| ||||||||||||||| ||||||||| ||||||||||||||    
T  8610057 ttcaacattcactttttcaattcccaacactccatatcattttctctct 8610009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 170 - 209
Target Start/End: Original strand, 13814952 - 13814992
Alignment:
Q  170 actttttcaatt-ccaacactccacatcattttctctctct 209  Q
    |||||||||||| ||||||||||||||||||||||||||||    
T  13814952 actttttcaatttccaacactccacatcattttctctctct 13814992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 202
Target Start/End: Complemental strand, 38207133 - 38207053
Alignment:
Q  123 ttagaccatttacagtggttaaatatattcaataatcttcaacatccactttttcaatt-ccaacactccacatcattttc 202  Q
    ||||||||| |||| |||| |||   ||||||||  ||||||||| ||||||||||||| |||||||||||||| ||||||    
T  38207133 ttagaccatgtacaatggtaaaaataattcaatatccttcaacattcactttttcaattcccaacactccacattattttc 38207053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 150 - 208
Target Start/End: Original strand, 13947351 - 13947410
Alignment:
Q  150 ttcaataatcttcaacatccactttttcaattcc-aacactccacatcattttctctctc 208  Q
    |||||||  |||||||| | |||||||||||||| |||||||||||||||||||| ||||    
T  13947351 ttcaatacccttcaacacctactttttcaattcccaacactccacatcattttctttctc 13947410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 209
Target Start/End: Original strand, 5212294 - 5212336
Alignment:
Q  168 ccactttttcaattcc-aacactccacatcattttctctctct 209  Q
    ||||||||| |||||| ||||||||||||||||||||||||||    
T  5212294 ccacttttttaattcccaacactccacatcattttctctctct 5212336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 209
Target Start/End: Complemental strand, 26632229 - 26632179
Alignment:
Q  160 ttcaacatccactttttcaattcc-aacactccacatcattttctctctct 209  Q
    ||||||| |||||||||||||||| ||||| |||| |||||||||||||||    
T  26632229 ttcaacacccactttttcaattcccaacacgccacgtcattttctctctct 26632179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 209
Target Start/End: Complemental strand, 30470894 - 30470844
Alignment:
Q  160 ttcaacatccactttttcaattcc-aacactccacatcattttctctctct 209  Q
    ||||| ||||| |||||||||||| |||||||||| |||||||||||||||    
T  30470894 ttcaagatccattttttcaattcccaacactccacgtcattttctctctct 30470844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 209
Target Start/End: Complemental strand, 38584970 - 38584920
Alignment:
Q  160 ttcaacatccactttttcaattcc-aacactccacatcattttctctctct 209  Q
    |||||||  ||||||||||||||| |||||||||| |||||||||||||||    
T  38584970 ttcaacacacactttttcaattcccaacactccacgtcattttctctctct 38584920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 205
Target Start/End: Original strand, 42860717 - 42860755
Alignment:
Q  168 ccactttttcaattcc-aacactccacatcattttctct 205  Q
    |||||||||||||||| ||||||||||||||||||||||    
T  42860717 ccactttttcaattcccaacactccacatcattttctct 42860755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 123 - 208
Target Start/End: Complemental strand, 7511969 - 7511884
Alignment:
Q  123 ttagaccatttacagtggttaaatatattcaataatcttcaacatccactttttcaattccaacactccacatcattttctctctc 208  Q
    ||||||||||||   |||||||| | |||||| || | |||| |||   ||||| | |||||||||||||||||||||||||||||    
T  7511969 ttagaccatttagtatggttaaaaacattcaacaaccctcaagatcatttttttaatttccaacactccacatcattttctctctc 7511884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 161 - 209
Target Start/End: Complemental strand, 23353258 - 23353209
Alignment:
Q  161 tcaacatccactttttcaatt-ccaacactccacatcattttctctctct 209  Q
    ||||| ||||||||||||||| |||||||||||||||  |||||||||||    
T  23353258 tcaacgtccactttttcaatttccaacactccacatccctttctctctct 23353209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 169 - 209
Target Start/End: Original strand, 44503171 - 44503212
Alignment:
Q  169 cactttttcaattcc-aacactccacatcattttctctctct 209  Q
    ||||||||||||||| |||||||||| |||||||||||||||    
T  44503171 cactttttcaattcccaacactccacgtcattttctctctct 44503212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 208
Target Start/End: Complemental strand, 1634904 - 1634868
Alignment:
Q  173 ttttcaattc-caacactccacatcattttctctctc 208  Q
    |||||||||| ||||||||||||||||||||||||||    
T  1634904 ttttcaattctcaacactccacatcattttctctctc 1634868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 207
Target Start/End: Complemental strand, 24431939 - 24431891
Alignment:
Q  160 ttcaacatccactttttcaa-ttccaacactccacatcattttctctct 207  Q
    |||||||||||||||||||| || |||||||||| |||| |||||||||    
T  24431939 ttcaacatccactttttcaattttcaacactccaaatcactttctctct 24431891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 201
Target Start/End: Original strand, 29731680 - 29731732
Alignment:
Q  150 ttcaataatcttcaacatccactttttcaatt-ccaacactccacatcatttt 201  Q
    |||||||  |||||||| |||||||||||||| |||||||||||| |||||||    
T  29731680 ttcaatacccttcaacacccactttttcaattcccaacactccacgtcatttt 29731732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 61; Significance: 2e-26; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 122 - 209
Target Start/End: Original strand, 40888851 - 40888939
Alignment:
Q  122 cttagaccatttacagtggttaaatatattcaataatcttcaacatccactttttcaatt-ccaacactccacatcattttctctctct 209  Q
    ||||||||||||||| |||| ||||| ||||||||| |||||||| |||||||||||||| ||||||||||||||||||||||||||||    
T  40888851 cttagaccatttacaatggtaaaatacattcaataaccttcaacacccactttttcaattcccaacactccacatcattttctctctct 40888939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 125 - 209
Target Start/End: Complemental strand, 32976687 - 32976602
Alignment:
Q  125 agaccatttacagtggttaaatatattcaataatcttcaacatccactttttcaatt-ccaacactccacatcattttctctctct 209  Q
    |||||||||||| |||| ||||| ||||||||| |||||||| |||||||||||||| ||||||||||||||||||||||||||||    
T  32976687 agaccatttacaatggtaaaatacattcaataaccttcaacacccactttttcaattcccaacactccacatcattttctctctct 32976602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 125 - 209
Target Start/End: Original strand, 19241276 - 19241361
Alignment:
Q  125 agaccatttacagtggttaaatatattcaataatcttcaacatccactttttcaattc-caacactccacatcattttctctctct 209  Q
    |||||||||||| |||| ||||| |||||| || |||||||| ||||||||||||||| |||||||||||||||||||||||||||    
T  19241276 agaccatttacaatggtaaaatacattcaacaaccttcaacacccactttttcaattctcaacactccacatcattttctctctct 19241361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 121 - 209
Target Start/End: Original strand, 27942447 - 27942536
Alignment:
Q  121 tcttagaccatttacagtggttaaatatattcaataatcttcaacatccactttttcaat-tccaacactccacatcattttctctctct 209  Q
    |||||||||||||||| |||| ||||| |||||| || |||||||| |||||||||||||  ||||||||||||||||||||||||||||    
T  27942447 tcttagaccatttacaatggtaaaatacattcaacaaccttcaacacccactttttcaatccccaacactccacatcattttctctctct 27942536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 123 - 208
Target Start/End: Complemental strand, 25671019 - 25670933
Alignment:
Q  123 ttagaccatttacagtggttaaatatattcaataatcttcaacatccactttttcaatt-ccaacactccacatcattttctctctc 208  Q
    ||||||||| |||| |||||| | || |||||||| |||||||| |||||||||||||| |||||||||||||||||||||||||||    
T  25671019 ttagaccatgtacaatggttacaaattttcaataaccttcaacacccactttttcaattcccaacactccacatcattttctctctc 25670933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 125 - 209
Target Start/End: Original strand, 42317848 - 42317933
Alignment:
Q  125 agaccatttacagtggttaaatatattcaataatcttcaacatccactttttcaa-ttccaacactccacatcattttctctctct 209  Q
    |||||||||||| |||| ||| | |||||| || ||||||||| ||||||||||| ||||||||||||| ||||||||||||||||    
T  42317848 agaccatttacaatggtaaaacaaattcaacaaccttcaacattcactttttcaatttccaacactccatatcattttctctctct 42317933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 125 - 209
Target Start/End: Complemental strand, 42807111 - 42807026
Alignment:
Q  125 agaccatttacagtggttaaatatattcaataatcttcaacatccactttttcaattc-caacactccacatcattttctctctct 209  Q
    |||||||||||| |||| | | |||||||| || | |||||| ||||||||||||||| |||||||||||||||||||||||||||    
T  42807111 agaccatttacaatggtcacaaatattcaacaaccctcaacacccactttttcaattctcaacactccacatcattttctctctct 42807026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 122 - 209
Target Start/End: Original strand, 7650960 - 7651048
Alignment:
Q  122 cttagaccatttacagtggttaaatatattcaataatcttcaacatccactttttcaattcc-aacactccacatcattttctctctct 209  Q
    ||||||||||||||| |||| ||||| |||||| || ||| |||| | | |||||||||||| ||||||||||||||||||||||||||    
T  7650960 cttagaccatttacaatggtaaaatacattcaacaacctttaacacctattttttcaattcccaacactccacatcattttctctctct 7651048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 150 - 208
Target Start/End: Original strand, 3454721 - 3454780
Alignment:
Q  150 ttcaataatcttcaacatccactttttcaattc-caacactccacatcattttctctctc 208  Q
    |||||||  |||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  3454721 ttcaatacccttcaacatccactttttcaattctcaacactccacatcattttctctctc 3454780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 149 - 209
Target Start/End: Complemental strand, 41153093 - 41153032
Alignment:
Q  149 attcaataatcttcaacatccactttttcaattc-caacactccacatcattttctctctct 209  Q
    |||||| ||| ||||||||||| ||||||||||| |||||||||||||||||||||||||||    
T  41153093 attcaacaatattcaacatccattttttcaattctcaacactccacatcattttctctctct 41153032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 123 - 209
Target Start/End: Complemental strand, 31008499 - 31008411
Alignment:
Q  123 ttagaccatttacagtggttaaatatattcaataatcttc-aacatccactttttcaattc-caacactccacatcattttctctctct 209  Q
    |||||||||||||| |||| ||||| |||||| || |||  |||| ||||||||||||||| ||||||| |||||||||||||||||||    
T  31008499 ttagaccatttacaatggtaaaatacattcaacaaccttataacacccactttttcaattctcaacacttcacatcattttctctctct 31008411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 160 - 209
Target Start/End: Complemental strand, 8176379 - 8176329
Alignment:
Q  160 ttcaacatccactttttcaattcc-aacactccacatcattttctctctct 209  Q
    ||||||| |||||||||||||||| ||||||||||||||||||||||||||    
T  8176379 ttcaacacccactttttcaattcccaacactccacatcattttctctctct 8176329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 160 - 209
Target Start/End: Complemental strand, 31013920 - 31013870
Alignment:
Q  160 ttcaacatccactttttcaattcc-aacactccacatcattttctctctct 209  Q
    ||||||| |||||||||||||||| ||||||||||||||||||||||||||    
T  31013920 ttcaacacccactttttcaattcccaacactccacatcattttctctctct 31013870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 160 - 209
Target Start/End: Original strand, 41263357 - 41263407
Alignment:
Q  160 ttcaacatccactttttcaatt-ccaacactccacatcattttctctctct 209  Q
    |||||||||||||||||||||| ||||| ||||||||||||||||||||||    
T  41263357 ttcaacatccactttttcaattcccaacgctccacatcattttctctctct 41263407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 125 - 209
Target Start/End: Original strand, 14278789 - 14278874
Alignment:
Q  125 agaccatttacagtggttaaatatattcaataatcttcaacatccactttttcaattcc-aacactccacatcattttctctctct 209  Q
    |||||||||||| |||| ||| | |||||| ||   |||||| ||| |||||||||||| ||||||||||||||||||||||||||    
T  14278789 agaccatttacaatggtgaaaaacattcaacaacactcaacacccattttttcaattcccaacactccacatcattttctctctct 14278874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 121 - 204
Target Start/End: Complemental strand, 4219556 - 4219472
Alignment:
Q  121 tcttagaccatttacagtggttaaatatattcaataatcttcaacatccactttttcaatt-ccaacactccacatcattttctc 204  Q
    ||||||||||| | || |||||| | || |||||||  |||||||| |||||||||||||| |||||||| ||||||||||||||    
T  4219556 tcttagaccatgtgcaatggttacaaattttcaatacccttcaacacccactttttcaattcccaacacttcacatcattttctc 4219472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 149 - 208
Target Start/End: Complemental strand, 13479911 - 13479851
Alignment:
Q  149 attcaataatcttcaacatccactttttcaattcc-aacactccacatcattttctctctc 208  Q
    ||||||||  |||||||| ||||||||| |||||| |||||||||||||||||||||||||    
T  13479911 attcaatacccttcaacacccacttttttaattcccaacactccacatcattttctctctc 13479851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 123 - 209
Target Start/End: Complemental strand, 27407156 - 27407069
Alignment:
Q  123 ttagaccatttacagtggttaaatatattcaataatcttcaacatccactttttcaattcc-aacactccacatcattttctctctct 209  Q
    |||||||||||||| |||| | | | |||||| || ||| ||||  ||||||||||||||| |||||||||||| |||||||||||||    
T  27407156 ttagaccatttacaatggtcacaaacattcaacaacctttaacactcactttttcaattcccaacactccacattattttctctctct 27407069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 150 - 208
Target Start/End: Complemental strand, 29619100 - 29619041
Alignment:
Q  150 ttcaataatcttcaacatccactttttcaattcc-aacactccacatcattttctctctc 208  Q
    |||||||  |||||||| |||||||||||||||| |||||||||||||||||||| ||||    
T  29619100 ttcaatacccttcaacacccactttttcaattcccaacactccacatcattttctttctc 29619041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 123 - 209
Target Start/End: Complemental strand, 36572533 - 36572446
Alignment:
Q  123 ttagaccatttacagtggttaaatatattcaataatcttcaacatccactttttcaatt-ccaacactccacatcattttctctctct 209  Q
    |||||||||||| | |||| ||  | |||||| || | ||||||| ||||||||||||| |||| |||||||||||||||||||||||    
T  36572533 ttagaccatttataatggtaaatcaaattcaacaaccctcaacattcactttttcaatttccaatactccacatcattttctctctct 36572446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 150 - 208
Target Start/End: Original strand, 39008465 - 39008524
Alignment:
Q  150 ttcaataatcttcaacatccactttttcaatt-ccaacactccacatcattttctctctc 208  Q
    |||||||  ||||||||||||||||||||||| ||||||||||| ||| |||||||||||    
T  39008465 ttcaatacccttcaacatccactttttcaattcccaacactccaaatcgttttctctctc 39008524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 150 - 208
Target Start/End: Original strand, 39238399 - 39238458
Alignment:
Q  150 ttcaataatcttcaacatccactttttcaattcc-aacactccacatcattttctctctc 208  Q
    |||||||  |||||||||  |||||||||||||| |||||||||||||||||||||||||    
T  39238399 ttcaatatccttcaacatttactttttcaattcccaacactccacatcattttctctctc 39238458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 168 - 209
Target Start/End: Original strand, 4577008 - 4577050
Alignment:
Q  168 ccactttttcaattcc-aacactccacatcattttctctctct 209  Q
    |||||||||||||||| ||||||||||||||||||||||||||    
T  4577008 ccactttttcaattcccaacactccacatcattttctctctct 4577050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 160 - 201
Target Start/End: Complemental strand, 9274525 - 9274483
Alignment:
Q  160 ttcaacatccactttttcaatt-ccaacactccacatcatttt 201  Q
    |||||||||||||||||||||| ||||||||||||||||||||    
T  9274525 ttcaacatccactttttcaattcccaacactccacatcatttt 9274483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 160 - 209
Target Start/End: Original strand, 25032348 - 25032398
Alignment:
Q  160 ttcaacatccactttttcaatt-ccaacactccacatcattttctctctct 209  Q
    ||||||| |||| ||||||||| ||||||||||||||||||||||||||||    
T  25032348 ttcaacacccaccttttcaatttccaacactccacatcattttctctctct 25032398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 164 - 209
Target Start/End: Original strand, 25652812 - 25652858
Alignment:
Q  164 acatccactttttcaattcc-aacactccacatcattttctctctct 209  Q
    |||||||||||||||||||| |||||| |||||||||||||||||||    
T  25652812 acatccactttttcaattcccaacacttcacatcattttctctctct 25652858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 126 - 207
Target Start/End: Complemental strand, 32363725 - 32363643
Alignment:
Q  126 gaccatttacagtggttaaatatattcaataatcttcaacatccactttttcaa-ttccaacactccacatcattttctctct 207  Q
    ||||||||||| ||||| || || || ||||| |||||||| ||||||||| || || ||||||||||||| |||||||||||    
T  32363725 gaccatttacaatggttgaaaatttttaataaccttcaacacccacttttttaattttcaacactccacattattttctctct 32363643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 119 - 207
Target Start/End: Complemental strand, 37882546 - 37882457
Alignment:
Q  119 aatcttagaccatttacagtggttaaatatattcaataatcttcaacatccactttttcaattcc-aacactccacatcattttctctct 207  Q
    ||||| ||||||| |||| |||| ||| | |||||| ||  ||||||| ||| |||||||||||| |||||||||||||||||| |||||    
T  37882546 aatctaagaccatctacaatggtgaaaaacattcaacaacgttcaacacccattttttcaattcccaacactccacatcattttttctct 37882457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 125 - 208
Target Start/End: Original strand, 23089478 - 23089562
Alignment:
Q  125 agaccatttacagtggttaaatatattcaataatcttcaacatccactttttcaattcc-aacactccacatcattttctctctc 208  Q
    ||||||| | || |||||| | || |||||||  |||||||| ||||||||| |||||| |||||| ||||||||||||||||||    
T  23089478 agaccatgtgcaatggttacaaattttcaatacccttcaacacccacttttttaattcccaacacttcacatcattttctctctc 23089562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 163 - 209
Target Start/End: Complemental strand, 27407819 - 27407772
Alignment:
Q  163 aacatccactttttcaatt-ccaacactccacatcattttctctctct 209  Q
    ||||||||||||||||||| |||| ||||||||||||||| |||||||    
T  27407819 aacatccactttttcaatttccaatactccacatcattttatctctct 27407772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 125 - 209
Target Start/End: Complemental strand, 30648224 - 30648139
Alignment:
Q  125 agaccatttacagtggttaaatatattcaataatcttcaacatccactttttcaatt-ccaacactccacatcattttctctctct 209  Q
    |||||||||||| |||| | | | |||||| || | |||||| |||||||||||||| || |||||||||| |||||| |||||||    
T  30648224 agaccatttacaatggtcacaaacattcaacaaccctcaacacccactttttcaattccctacactccacaccattttatctctct 30648139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 60; Significance: 9e-26; HSPs: 26)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 123 - 209
Target Start/End: Original strand, 36518474 - 36518561
Alignment:
Q  123 ttagaccatttacagtggttaaatatattcaataatcttcaacatccactttttcaatt-ccaacactccacatcattttctctctct 209  Q
    |||||||||||||| |||| ||||| ||||||||| |||||||| |||||||||||||| ||||||||||||||||||||||||||||    
T  36518474 ttagaccatttacaatggtaaaatacattcaataaccttcaacacccactttttcaattcccaacactccacatcattttctctctct 36518561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 121 - 209
Target Start/End: Complemental strand, 47159609 - 47159521
Alignment:
Q  121 tcttagaccatttacagtggttaaatatattcaataatcttcaacatccactttttcaattccaacactccacatcattttctctctct 209  Q
    |||||||||||||||| |||| ||||| |||||| || |||||||||||||||||| | | ||||||||||||||||||||||||||||    
T  47159609 tcttagaccatttacaatggtaaaatacattcaacaaccttcaacatccactttttaattcccaacactccacatcattttctctctct 47159521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 125 - 209
Target Start/End: Complemental strand, 33078896 - 33078811
Alignment:
Q  125 agaccatttacagtggttaaatatattcaataatcttcaacatccactttttcaatt-ccaacactccacatcattttctctctct 209  Q
    |||||||||||| |||||||| |||||||| || | ||||||||||||||||||||| |||||||||||| | |||||||||||||    
T  33078896 agaccatttacaatggttaaacatattcaacaaccctcaacatccactttttcaattcccaacactccacgttattttctctctct 33078811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 129 - 209
Target Start/End: Original strand, 37887812 - 37887893
Alignment:
Q  129 catttacagtggttaaatatattcaataatcttcaacatccactttttcaatt-ccaacactccacatcattttctctctct 209  Q
    |||||||| |||| ||||| |||||| ||||||||||||||| |||||||||| |||||||||||||||||||| |||||||    
T  37887812 catttacaatggtaaaataaattcaacaatcttcaacatccattttttcaattcccaacactccacatcattttatctctct 37887893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 125 - 209
Target Start/End: Original strand, 42881319 - 42881404
Alignment:
Q  125 agaccatttacagtggttaaatatattcaataatcttcaacatccactttttcaatt-ccaacactccacatcattttctctctct 209  Q
    |||||||||||| |||  || ||||||||| || | ||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  42881319 agaccatttacaatggcaaattatattcaacaaccctcaacatccactttttcaattcccaacactccacatcattttctctctct 42881404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 122 - 209
Target Start/End: Complemental strand, 40302605 - 40302517
Alignment:
Q  122 cttagaccatttacagtggttaaatatattcaataatcttcaacatccactttttcaattcc-aacactccacatcattttctctctct 209  Q
    ||||||||||||||| |||| | | |||||||| |||| || ||| ||| |||||||||||| ||||||||||||||||||||||||||    
T  40302605 cttagaccatttacaatggtcacaaatattcaacaatcctcgacacccattttttcaattcccaacactccacatcattttctctctct 40302517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 150 - 208
Target Start/End: Original strand, 39769715 - 39769774
Alignment:
Q  150 ttcaataatcttcaacatccactttttcaatt-ccaacactccacatcattttctctctc 208  Q
    |||||||| |||||||| |||||||||||||| |||||||||||||||||||||||||||    
T  39769715 ttcaataaccttcaacacccactttttcaatttccaacactccacatcattttctctctc 39769774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 149 - 209
Target Start/End: Original strand, 30566585 - 30566646
Alignment:
Q  149 attcaataatcttcaacatccactttttcaattc-caacactccacatcattttctctctct 209  Q
    |||||| |||| |||||| ||||||||||||||| |||||||||||||||||||||||||||    
T  30566585 attcaacaatcctcaacacccactttttcaattctcaacactccacatcattttctctctct 30566646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 122 - 209
Target Start/End: Original strand, 30720078 - 30720166
Alignment:
Q  122 cttagaccatttacagtggttaaatatattcaataatcttcaacatccactttttcaatt-ccaacactccacatcattttctctctct 209  Q
    |||||| |||||||  |||  |||||||||||| || | |||||| | |||||||||||| ||||||||||||||||||||||||||||    
T  30720078 cttagatcatttacgatggcaaaatatattcaacaaccctcaacacctactttttcaatttccaacactccacatcattttctctctct 30720166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 126 - 209
Target Start/End: Original strand, 37951709 - 37951793
Alignment:
Q  126 gaccatttacagtggttaaatatattcaataatcttcaacatccactttttcaatt-ccaacactccacatcattttctctctct 209  Q
    ||||||||||| |||| ||||| |||||| || |||||||| | |||||||||||| ||||||||||| ||||||||| ||||||    
T  37951709 gaccatttacaatggtaaaatacattcaacaaccttcaacacctactttttcaattcccaacactccatatcattttccctctct 37951793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 160 - 209
Target Start/End: Complemental strand, 22737671 - 22737621
Alignment:
Q  160 ttcaacatccactttttcaattcc-aacactccacatcattttctctctct 209  Q
    ||||||| |||||||||||||||| ||||||||||||||||||||||||||    
T  22737671 ttcaacacccactttttcaattcccaacactccacatcattttctctctct 22737621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 149 - 209
Target Start/End: Complemental strand, 28318130 - 28318069
Alignment:
Q  149 attcaataatcttcaacatccactttttcaattcc-aacactccacatcattttctctctct 209  Q
    |||||| || ||| |||||||||||||| |||||| ||||||||||||||||||||||||||    
T  28318130 attcaacaacctttaacatccacttttttaattcccaacactccacatcattttctctctct 28318069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 120 - 208
Target Start/End: Complemental strand, 45549735 - 45549646
Alignment:
Q  120 atcttagaccatttacagtggttaaatatattcaataatcttcaacatccactttttcaatt-ccaacactccacatcattttctctctc 208  Q
    |||||||||||| |||| |||  ||| |  |||||||  |||||||| |||||||||||||| |||||||||||||||||||| ||||||    
T  45549735 atcttagaccatgtacaatgggaaaaaaatttcaatacccttcaacaaccactttttcaattcccaacactccacatcattttttctctc 45549646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 160 - 209
Target Start/End: Original strand, 114486 - 114536
Alignment:
Q  160 ttcaacatccactttttcaattc-caacactccacatcattttctctctct 209  Q
    ||||||| ||||||||| ||||| |||||||||||||||||||||||||||    
T  114486 ttcaacacccactttttaaattctcaacactccacatcattttctctctct 114536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 160 - 209
Target Start/End: Original strand, 5813094 - 5813144
Alignment:
Q  160 ttcaacatccactttttcaattcc-aacactccacatcattttctctctct 209  Q
    ||||||| |||||||||||||||| |||||| |||||||||||||||||||    
T  5813094 ttcaacacccactttttcaattcccaacactgcacatcattttctctctct 5813144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 168 - 209
Target Start/End: Original strand, 21654850 - 21654892
Alignment:
Q  168 ccactttttcaatt-ccaacactccacatcattttctctctct 209  Q
    |||||||||||||| ||||||||||||||||||||||||||||    
T  21654850 ccactttttcaatttccaacactccacatcattttctctctct 21654892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 168 - 209
Target Start/End: Original strand, 22191224 - 22191266
Alignment:
Q  168 ccactttttcaatt-ccaacactccacatcattttctctctct 209  Q
    |||||||||||||| ||||||||||||||||||||||||||||    
T  22191224 ccactttttcaatttccaacactccacatcattttctctctct 22191266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 163 - 209
Target Start/End: Complemental strand, 25218881 - 25218834
Alignment:
Q  163 aacatccactttttcaatt-ccaacactccacatcattttctctctct 209  Q
    ||||||||||||||||||| |||||||| || ||||||||||||||||    
T  25218881 aacatccactttttcaatttccaacacttcatatcattttctctctct 25218834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 162 - 208
Target Start/End: Complemental strand, 32130345 - 32130298
Alignment:
Q  162 caacatccactttttcaattcc-aacactccacatcattttctctctc 208  Q
    ||||| ||||||||| |||||| |||||||||||||||||||||||||    
T  32130345 caacacccacttttttaattcccaacactccacatcattttctctctc 32130298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 207
Target Start/End: Original strand, 22656629 - 22656711
Alignment:
Q  126 gaccatttacagtggttaaatatattcaataatcttcaacatccactttttcaattcc-aacactccacatcattttctctct 207  Q
    ||||||||||| |||| | | |||||||| || | | |||||||| ||||| |||||| ||||| ||||||||||||||||||    
T  22656629 gaccatttacaatggtcacaaatattcaacaaaccttaacatccatttttttaattcctaacacgccacatcattttctctct 22656711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 209
Target Start/End: Complemental strand, 35029185 - 35029135
Alignment:
Q  160 ttcaacatccactttttcaattcc-aacactccacatcattttctctctct 209  Q
    ||||||| | |||||||||||||| |||| |||||||||||||||||||||    
T  35029185 ttcaacacctactttttcaattcccaacattccacatcattttctctctct 35029135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 201
Target Start/End: Original strand, 38970027 - 38970069
Alignment:
Q  160 ttcaacatccactttttcaatt-ccaacactccacatcatttt 201  Q
    ||||||| |||||||||||||| ||||||||||||||||||||    
T  38970027 ttcaacacccactttttcaatttccaacactccacatcatttt 38970069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 209
Target Start/End: Original strand, 48984911 - 48984953
Alignment:
Q  168 ccactttttcaatt-ccaacactccacatcattttctctctct 209  Q
    |||||||||||||| ||||| ||||||||||||||||||||||    
T  48984911 ccactttttcaatttccaacgctccacatcattttctctctct 48984953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 160 - 208
Target Start/End: Original strand, 32748793 - 32748842
Alignment:
Q  160 ttcaacatccactttttcaattcc-aacactccacatcattttctctctc 208  Q
    ||||||||| | |||||||||||| |||||||||||| ||||||||||||    
T  32748793 ttcaacatctattttttcaattcccaacactccacattattttctctctc 32748842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 161 - 209
Target Start/End: Complemental strand, 43571169 - 43571120
Alignment:
Q  161 tcaacatccactttttcaattcc-aacactccacatcattttctctctct 209  Q
    |||||| ||||||||||  |||| ||||||||||||||||||||||||||    
T  43571169 tcaacacccactttttctcttcccaacactccacatcattttctctctct 43571120  T

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Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 201
Target Start/End: Original strand, 20354209 - 20354261
Alignment:
Q  150 ttcaataatcttcaacatccactttttcaattcc-aacactccacatcatttt 201  Q
    |||||||  |||||||| | |||||||||||||| ||||||||||||||||||    
T  20354209 ttcaatacccttcaacacctactttttcaattcctaacactccacatcatttt 20354261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 60; Significance: 9e-26; HSPs: 31)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 119 - 209
Target Start/End: Complemental strand, 7588622 - 7588531
Alignment:
Q  119 aatcttagaccatttacagtggttaaatatattcaataatcttcaacatccactttttcaatt-ccaacactccacatcattttctctctct 209  Q
    |||||||||||||||||| |||| ||||| |||||| || |||||||| |||||||||||||| ||||||||||||||||||||||||||||    
T  7588622 aatcttagaccatttacaatggtaaaatacattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctct 7588531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 123 - 209
Target Start/End: Original strand, 14382927 - 14383014
Alignment:
Q  123 ttagaccatttacagtggttaaatatattcaataatcttcaacatccactttttcaattcc-aacactccacatcattttctctctct 209  Q
    |||||||||||||| |||  |||||||||||| || | ||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  14382927 ttagaccatttacaatggcaaaatatattcaaaaaccctcaacatccactttttcaattcctaacactccacatcattttctctctct 14383014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 121 - 208
Target Start/End: Complemental strand, 17929371 - 17929283
Alignment:
Q  121 tcttagaccatttacagtggttaaatatattcaataatcttcaacatccactttttcaatt-ccaacactccacatcattttctctctc 208  Q
    ||||||||||| | || |||||||| || |||||||  |||||||||||| |||||||||| |||||||||||||||||||||||||||    
T  17929371 tcttagaccatgtgcaatggttaaaaattttcaatacccttcaacatccattttttcaattcccaacactccacatcattttctctctc 17929283  T

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Target: chr2; HSP #4
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 122 - 209
Target Start/End: Complemental strand, 22351729 - 22351641
Alignment:
Q  122 cttagaccatttacagtggttaaatatattcaataatcttcaacatccactttttcaatt-ccaacactccacatcattttctctctct 209  Q
    ||||||||||||||| |||| |   |||||||| || |||||||| |||||||||||||| ||||||||||||||||||||||||||||    
T  22351729 cttagaccatttacaatggtaatcaatattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctct 22351641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 161 - 209
Target Start/End: Original strand, 6362952 - 6363000
Alignment:
Q  161 tcaacatccactttttcaattccaacactccacatcattttctctctct 209  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||    
T  6362952 tcaacatccactttttcaattccaacactctacatcattttctctctct 6363000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 150 - 208
Target Start/End: Original strand, 17485804 - 17485863
Alignment:
Q  150 ttcaataatcttcaacatccactttttcaattcc-aacactccacatcattttctctctc 208  Q
    |||||||  ||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  17485804 ttcaatacccttcaacatccactttttcaattcccaacactccacatcattttctctctc 17485863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 147 - 209
Target Start/End: Original strand, 43021725 - 43021788
Alignment:
Q  147 atattcaataatcttcaacatccactttttcaattcc-aacactccacatcattttctctctct 209  Q
    |||||||| || |||||||| |||||||||||||||| ||||||||||||||||||||||||||    
T  43021725 atattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctct 43021788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 125 - 209
Target Start/End: Complemental strand, 1073195 - 1073110
Alignment:
Q  125 agaccatttacagtggttaaatatattcaataatcttcaacatccactttttcaa-ttccaacactccacatcattttctctctct 209  Q
    |||||||||||| |||| ||| | |||||| || | ||||||||||||||||||| || ||||||||||| |||||||||||||||    
T  1073195 agaccatttacaatggtaaaacaaattcaacaaccctcaacatccactttttcaattttcaacactccacttcattttctctctct 1073110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 160 - 208
Target Start/End: Complemental strand, 1308774 - 1308725
Alignment:
Q  160 ttcaacatccactttttcaatt-ccaacactccacatcattttctctctc 208  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||    
T  1308774 ttcaacatccactttttcaatttccaacactccacatcattttctctctc 1308725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 122 - 209
Target Start/End: Complemental strand, 7763603 - 7763514
Alignment:
Q  122 cttagaccatttacagtggttaaatatatt-caataatcttcaacatccactttttcaattc-caacactccacatcattttctctctct 209  Q
    ||||||||||||||| |||| ||| | ||| |||||  |||||||| | ||||||||||||| |||||||||||||||||||||||||||    
T  7763603 cttagaccatttacaatggtaaaaaaaatttcaatacgcttcaacaccaactttttcaattctcaacactccacatcattttctctctct 7763514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 125 - 209
Target Start/End: Original strand, 36526783 - 36526868
Alignment:
Q  125 agaccatttacagtggttaaatatattcaataatcttcaacatccactttttcaatt-ccaacactccacatcattttctctctct 209  Q
    |||||||||||| |||  |||||||||||| || | | |||| |||||||||||||| |||||||||||||| |||||||||||||    
T  36526783 agaccatttacaatggcaaaatatattcaacaacccttaacacccactttttcaattcccaacactccacattattttctctctct 36526868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 160 - 209
Target Start/End: Original strand, 8852054 - 8852104
Alignment:
Q  160 ttcaacatccactttttcaattcc-aacactccacatcattttctctctct 209  Q
    ||||||| |||||||||||||||| ||||||||||||||||||||||||||    
T  8852054 ttcaacacccactttttcaattcccaacactccacatcattttctctctct 8852104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 160 - 209
Target Start/End: Original strand, 12855016 - 12855066
Alignment:
Q  160 ttcaacatccactttttcaattcc-aacactccacatcattttctctctct 209  Q
    ||||||| |||||||||||||||| ||||||||||||||||||||||||||    
T  12855016 ttcaacacccactttttcaattcccaacactccacatcattttctctctct 12855066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 160 - 209
Target Start/End: Original strand, 24997077 - 24997127
Alignment:
Q  160 ttcaacatccactttttcaattcc-aacactccacatcattttctctctct 209  Q
    ||||||| |||||||||||||||| ||||||||||||||||||||||||||    
T  24997077 ttcaacacccactttttcaattcccaacactccacatcattttctctctct 24997127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 160 - 209
Target Start/End: Complemental strand, 30822660 - 30822610
Alignment:
Q  160 ttcaacatccactttttcaattcc-aacactccacatcattttctctctct 209  Q
    ||||||| |||||||||||||||| ||||||||||||||||||||||||||    
T  30822660 ttcaacacccactttttcaattcccaacactccacatcattttctctctct 30822610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 160 - 209
Target Start/End: Original strand, 37245498 - 37245548
Alignment:
Q  160 ttcaacatccactttttcaattcc-aacactccacatcattttctctctct 209  Q
    ||||||| |||||||||||||||| ||||||||||||||||||||||||||    
T  37245498 ttcaacacccactttttcaattcccaacactccacatcattttctctctct 37245548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 123 - 204
Target Start/End: Complemental strand, 38997372 - 38997290
Alignment:
Q  123 ttagaccatttacagtggttaaatatattcaataatcttcaacatccactttttcaattc-caacactccacatcattttctc 204  Q
    |||||||||||||| ||||| || |  ||||| || |||||||| ||||||||||||||| |||||| |||||||||||||||    
T  38997372 ttagaccatttacaatggttgaaaagtttcaacaaccttcaacacccactttttcaattcgcaacacaccacatcattttctc 38997290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 123 - 207
Target Start/End: Complemental strand, 14152181 - 14152096
Alignment:
Q  123 ttagaccatttacagtggttaaatatattcaataatcttcaacatccactttttcaattcc-aacactccacatcattttctctct 207  Q
    ||||| ||| |||| ||||||||   |||||| ||  ||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  14152181 ttagaacatgtacaatggttaaaaccattcaacaacattcaacacccactttttcaattcccaacactccacatcattttctctct 14152096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 123 - 209
Target Start/End: Original strand, 44279952 - 44280039
Alignment:
Q  123 ttagaccatttacagtggttaaatatattcaataatcttcaacatccactttttcaattc-caacactccacatcattttctctctct 209  Q
    ||||||||| |||| |||| ||  | |||||| || ||| |||| ||||||||||||||  |||||||||||||||||||||||||||    
T  44279952 ttagaccatgtacaatggtaaatcaaattcaacaacctttaacacccactttttcaattttcaacactccacatcattttctctctct 44280039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 160 - 209
Target Start/End: Complemental strand, 927968 - 927918
Alignment:
Q  160 ttcaacatccactttttcaattcc-aacactccacatcattttctctctct 209  Q
    ||||||| ||||||||| |||||| ||||||||||||||||||||||||||    
T  927968 ttcaacacccacttttttaattcccaacactccacatcattttctctctct 927918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 160 - 209
Target Start/End: Original strand, 1987116 - 1987166
Alignment:
Q  160 ttcaacatccactttttcaattc-caacactccacatcattttctctctct 209  Q
    |||||||| |||||||||||||| ||||||||||||||||||||| |||||    
T  1987116 ttcaacattcactttttcaattctcaacactccacatcattttctatctct 1987166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 160 - 209
Target Start/End: Complemental strand, 4296848 - 4296798
Alignment:
Q  160 ttcaacatccactttttcaattcc-aacactccacatcattttctctctct 209  Q
    ||||||| |||||||||||||||| |||||||||||| |||||||||||||    
T  4296848 ttcaacacccactttttcaattcccaacactccacattattttctctctct 4296798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 160 - 209
Target Start/End: Original strand, 38901717 - 38901767
Alignment:
Q  160 ttcaacatccactttttcaattccaa-cactccacatcattttctctctct 209  Q
    |||||||  ||||||||||||||||| ||||||||||||||||||||||||    
T  38901717 ttcaacacacactttttcaattccaaacactccacatcattttctctctct 38901767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 150 - 209
Target Start/End: Complemental strand, 5146798 - 5146738
Alignment:
Q  150 ttcaataatcttcaacatccactttttcaatt-ccaacactccacatcattttctctctct 209  Q
    |||||||  |||||||| ||| ||||| |||| ||||||||||||||||||||||||||||    
T  5146798 ttcaatacccttcaacacccatttttttaatttccaacactccacatcattttctctctct 5146738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 150 - 205
Target Start/End: Complemental strand, 36209561 - 36209505
Alignment:
Q  150 ttcaataatcttcaacatccactttttcaattc-caacactccacatcattttctct 205  Q
    |||||||  |||||||| | ||||||||||||| |||||||||||||||||||||||    
T  36209561 ttcaatacccttcaacacctactttttcaattctcaacactccacatcattttctct 36209505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 150 - 209
Target Start/End: Original strand, 39490130 - 39490190
Alignment:
Q  150 ttcaataatcttcaacatccactttttcaatt-ccaacactccacatcattttctctctct 209  Q
    |||||||  |||||||| |||||||||||||| ||||||||||| |||||| |||||||||    
T  39490130 ttcaatacccttcaacacccactttttcaattcccaacactccaaatcattctctctctct 39490190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 209
Target Start/End: Complemental strand, 6333454 - 6333404
Alignment:
Q  160 ttcaacatccactttttcaattcc-aacactccacatcattttctctctct 209  Q
    |||||||||||||||||||||||| || | |||| ||||||||||||||||    
T  6333454 ttcaacatccactttttcaattcctaatattccatatcattttctctctct 6333404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 209
Target Start/End: Complemental strand, 9074293 - 9074251
Alignment:
Q  168 ccactttttcaattcc-aacactccacatcattttctctctct 209  Q
    ||||||||| |||||| ||||||||||||||||||||||||||    
T  9074293 ccacttttttaattcccaacactccacatcattttctctctct 9074251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 209
Target Start/End: Complemental strand, 31193048 - 31193010
Alignment:
Q  172 tttttcaatt-ccaacactccacatcattttctctctct 209  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  31193048 tttttcaatttccaacactccacatcattttctctctct 31193010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 121 - 209
Target Start/End: Original strand, 9117770 - 9117859
Alignment:
Q  121 tcttagaccatttacagtggttaaatatattcaataatcttcaacatccactttttcaa-ttccaacactccacatcattttctctctct 209  Q
    |||||||||||||| | |||| ||| | |||||| ||   |||||| |||||||||||| || ||||||||||  |||||||||||||||    
T  9117770 tcttagaccatttataatggtaaaacaaattcaacaactctcaacacccactttttcaattttcaacactccatttcattttctctctct 9117859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 207
Target Start/End: Complemental strand, 39434088 - 39434040
Alignment:
Q  160 ttcaacatccactttttcaatt-ccaacactccacatcattttctctct 207  Q
    ||||||| |||||||||||||| |||||| ||||||||||||| |||||    
T  39434088 ttcaacacccactttttcaatttccaacattccacatcattttttctct 39434040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 58; Significance: 1e-24; HSPs: 39)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 125 - 209
Target Start/End: Complemental strand, 34199380 - 34199295
Alignment:
Q  125 agaccatttacagtggttaaatatattcaataatcttcaacatccactttttcaatt-ccaacactccacatcattttctctctct 209  Q
    |||||||||||| |||| ||||| |||||| || ||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  34199380 agaccatttacaatggtaaaatacattcaacaaccttcaacatccactttttcaattcccaacactccacatcattttctctctct 34199295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 125 - 209
Target Start/End: Original strand, 6290561 - 6290646
Alignment:
Q  125 agaccatttacagtggttaaatatattcaataatcttcaacatccactttttcaatt-ccaacactccacatcattttctctctct 209  Q
    |||||||||||| |||| ||||| |||||| || |||||||| |||||||||||||| ||||||||||||||||||||||||||||    
T  6290561 agaccatttacaatggtaaaatacattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctct 6290646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 121 - 209
Target Start/End: Original strand, 40720992 - 40721081
Alignment:
Q  121 tcttagaccatttacagtggttaaatatattcaataatcttcaacatccactttttcaatt-ccaacactccacatcattttctctctct 209  Q
    |||||||||||||| | |||| ||||| |||||| ||| ||||||| |||||||||||||| ||||||||||||||||||||||||||||    
T  40720992 tcttagaccatttataatggtaaaatacattcaacaatattcaacacccactttttcaattcccaacactccacatcattttctctctct 40721081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 125 - 209
Target Start/End: Original strand, 56053978 - 56054063
Alignment:
Q  125 agaccatttacagtggttaaatatattcaataatcttcaacatccactttttcaatt-ccaacactccacatcattttctctctct 209  Q
    |||||||||||| |||||||| |||||||| || | | ||||||||||||||||||| ||||||||||||||||||||||||||||    
T  56053978 agaccatttacaatggttaaacatattcaacaacccttaacatccactttttcaattcccaacactccacatcattttctctctct 56054063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 122 - 209
Target Start/End: Complemental strand, 3618567 - 3618479
Alignment:
Q  122 cttagaccatttacagtggttaaatatattcaataatcttcaacatccactttttcaatt-ccaacactccacatcattttctctctct 209  Q
    ||||||||||||||| |||| ||| | |||||| || |||||||| |||||||||||||| ||||||||||||||||||||||||||||    
T  3618567 cttagaccatttacaatggtaaaacaaattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctct 3618479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 123 - 209
Target Start/End: Original strand, 33523229 - 33523316
Alignment:
Q  123 ttagaccatttacagtggttaaatatattcaataatcttcaacatccactttttcaatt-ccaacactccacatcattttctctctct 209  Q
    |||||||||||||| ||||| || || |||||||| | ||||||||||||||||||||| |||||| |||||||||||||||||||||    
T  33523229 ttagaccatttacaatggttgaaaattttcaataaccctcaacatccactttttcaattcccaacattccacatcattttctctctct 33523316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 125 - 209
Target Start/End: Complemental strand, 3533418 - 3533333
Alignment:
Q  125 agaccatttacagtggttaaatatattcaataatcttcaacatccactttttcaatt-ccaacactccacatcattttctctctct 209  Q
    |||||||||||| |||| | | |||||||| || |||||||| |||||||||||||| ||||||||||||||||||||||||||||    
T  3533418 agaccatttacaatggtaacaaatattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctct 3533333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 125 - 209
Target Start/End: Complemental strand, 23540537 - 23540452
Alignment:
Q  125 agaccatttacagtggttaaatatattcaataatcttcaacatccactttttcaa-ttccaacactccacatcattttctctctct 209  Q
    |||| ||||||| |||||||| |||||||| || |||||||| |||||||||||| ||||||||||| ||||||||||||||||||    
T  23540537 agactatttacaatggttaaacatattcaacaaccttcaacacccactttttcaatttccaacactcaacatcattttctctctct 23540452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 122 - 209
Target Start/End: Complemental strand, 48506720 - 48506632
Alignment:
Q  122 cttagaccatttacagtggttaaatatattcaataatcttcaacatccactttttcaa-ttccaacactccacatcattttctctctct 209  Q
    ||||||||||||||| |||| ||| | |||||| || | ||||||||||||||||||| || |||||||||||||||||||||||||||    
T  48506720 cttagaccatttacaatggtaaaacaaattcaacaaccctcaacatccactttttcaattttcaacactccacatcattttctctctct 48506632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 123 - 209
Target Start/End: Original strand, 8991742 - 8991829
Alignment:
Q  123 ttagaccatttacagtggttaaatatattcaataatcttcaacatccactttttcaatt-ccaacactccacatcattttctctctct 209  Q
    |||||||||||||| |||| | ||| |||||| || |||||||| ||||||||| |||| ||||||||||||||||||||||||||||    
T  8991742 ttagaccatttacaatggtaatatacattcaacaaccttcaacacccactttttgaattcccaacactccacatcattttctctctct 8991829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 150 - 208
Target Start/End: Complemental strand, 17329998 - 17329940
Alignment:
Q  150 ttcaataatcttcaacatccactttttcaattccaacactccacatcattttctctctc 208  Q
    |||||||  ||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  17329998 ttcaatacccttcaacatccactttttcaattccaacattccacatcattttctctctc 17329940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 121 - 205
Target Start/End: Original strand, 33604614 - 33604699
Alignment:
Q  121 tcttagaccatttacagtggttaaatatattcaataatcttcaacatccactttttcaatt-ccaacactccacatcattttctct 205  Q
    |||||||||||||||| | ||| || || |||||||| | |||||| |||||||||||||| ||||||||||||||||||||||||    
T  33604614 tcttagaccatttacaatagttgaaaattttcaataaccctcaacacccactttttcaattcccaacactccacatcattttctct 33604699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 125 - 209
Target Start/End: Complemental strand, 55560590 - 55560505
Alignment:
Q  125 agaccatttacagtggttaaatatattcaataatcttcaacatccactttttcaattcc-aacactccacatcattttctctctct 209  Q
    |||||||||||| ||   |||||||||||| ||   ||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  55560590 agaccatttacaatgccaaaatatattcaacaactctcaacatccactttttcaattcccaacactccacatcattttctctctct 55560505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 126 - 209
Target Start/End: Original strand, 38173517 - 38173601
Alignment:
Q  126 gaccatttacagtggttaaatatattcaataatcttcaacatccactttttcaattcc-aacactccacatcattttctctctct 209  Q
    ||||||||||| |||| | | |||||||| || | |||||| |||||||||||||||| ||||||||||||||||||||||||||    
T  38173517 gaccatttacaatggtcacaaatattcaacaaccctcaacacccactttttcaattcccaacactccacatcattttctctctct 38173601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 125 - 208
Target Start/End: Complemental strand, 45081523 - 45081439
Alignment:
Q  125 agaccatttacagtggttaaatatattcaataatcttcaacatccactttttcaattcc-aacactccacatcattttctctctc 208  Q
    ||||||| |||| |||  |||||| |||||||  |||||||| |||||||||||||||| |||||||||||||||||||||||||    
T  45081523 agaccatgtacaatgggaaaatattttcaatacccttcaacacccactttttcaattcccaacactccacatcattttctctctc 45081439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 126 - 207
Target Start/End: Complemental strand, 33077983 - 33077901
Alignment:
Q  126 gaccatttacagtggttaaatatattcaataatcttcaacatccactttttcaatt-ccaacactccacatcattttctctct 207  Q
    ||||||||||| |||| ||| | |||||| || | |||| |||||||||||||||| ||||||||||||||||||||||||||    
T  33077983 gaccatttacaatggtaaaacaaattcaacaaccctcaatatccactttttcaatttccaacactccacatcattttctctct 33077901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 160 - 209
Target Start/End: Complemental strand, 47750300 - 47750251
Alignment:
Q  160 ttcaacatccactttttcaattccaacactccacatcattttctctctct 209  Q
    |||||||||||||||||||||||| ||||||||| |||||||||||||||    
T  47750300 ttcaacatccactttttcaattcccacactccacgtcattttctctctct 47750251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 122 - 209
Target Start/End: Original strand, 28899290 - 28899378
Alignment:
Q  122 cttagaccatttacagtggttaaatatattcaataatcttcaacatccactttttcaatt-ccaacactccacatcattttctctctct 209  Q
    ||||||||||||||| |||||||| | |||||| || | |||||| |||||||||||||| |||| | |||||||| ||||||||||||    
T  28899290 cttagaccatttacaatggttaaacacattcaacaaccctcaacacccactttttcaattcccaatattccacatcgttttctctctct 28899378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 125 - 208
Target Start/End: Complemental strand, 48404011 - 48403927
Alignment:
Q  125 agaccatttacagtggttaaatatattcaataatcttcaacatccactttttcaatt-ccaacactccacatcattttctctctc 208  Q
    ||||||| | || |||||| | || |||||||  ||||||||| ||||||||||||| |||||||||||||||||||||||||||    
T  48404011 agaccatgtgcaatggttacaaattttcaatacccttcaacattcactttttcaatttccaacactccacatcattttctctctc 48403927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 150 - 208
Target Start/End: Original strand, 4981495 - 4981554
Alignment:
Q  150 ttcaataatcttcaacatccactttttcaattcc-aacactccacatcattttctctctc 208  Q
    |||||||  |||||||| |||||||||||||||| |||||||||||||||||||||||||    
T  4981495 ttcaatatccttcaacacccactttttcaattcccaacactccacatcattttctctctc 4981554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 150 - 208
Target Start/End: Original strand, 35809149 - 35809208
Alignment:
Q  150 ttcaataatcttcaacatccactttttcaatt-ccaacactccacatcattttctctctc 208  Q
    |||||||  ||||||||||||||||||||||| |||||| ||||||||||||||||||||    
T  35809149 ttcaatacccttcaacatccactttttcaattcccaacattccacatcattttctctctc 35809208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 123 - 208
Target Start/End: Original strand, 19272743 - 19272828
Alignment:
Q  123 ttagaccatttacagtggttaaatatattcaataatcttcaacatccactttttcaattcc-aacactccacatcattttctctctc 208  Q
    |||||||||||||| |||  ||| || |||||||  |||||||||  |||||||||||||| |||||||||||||||||||||||||    
T  19272743 ttagaccatttacaatggaaaaaaat-ttcaatacccttcaacatttactttttcaattcccaacactccacatcattttctctctc 19272828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 160 - 209
Target Start/End: Complemental strand, 46917587 - 46917537
Alignment:
Q  160 ttcaacatccactttttcaattcc-aacactccacatcattttctctctct 209  Q
    ||||||| |||||||||||||||| ||||||||||||||||||||||||||    
T  46917587 ttcaacacccactttttcaattcccaacactccacatcattttctctctct 46917537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 160 - 209
Target Start/End: Complemental strand, 54356972 - 54356922
Alignment:
Q  160 ttcaacatccactttttcaattcc-aacactccacatcattttctctctct 209  Q
    |||||||||||||||||||||||| |||||||||||||||||||| |||||    
T  54356972 ttcaacatccactttttcaattcccaacactccacatcattttctttctct 54356922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 149 - 209
Target Start/End: Original strand, 16020832 - 16020893
Alignment:
Q  149 attcaataatcttcaacatccactttttcaattcc-aacactccacatcattttctctctct 209  Q
    |||||| || |||||||| |||||||||||||||| |||||||||||| |||||||||||||    
T  16020832 attcaacaaccttcaacacccactttttcaattcccaacactccacattattttctctctct 16020893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 125 - 208
Target Start/End: Complemental strand, 13094501 - 13094417
Alignment:
Q  125 agaccatttacagtggttaaatatattcaataatcttcaacatccactttttcaattcc-aacactccacatcattttctctctc 208  Q
    ||||||| |||| |||  ||| || |||||||  |||||||| ||| |||||||||||| |||||||||||||||||||||||||    
T  13094501 agaccatgtacaatgggaaaaaattttcaatacccttcaacacccattttttcaattcccaacactccacatcattttctctctc 13094417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 119 - 209
Target Start/End: Complemental strand, 31336471 - 31336380
Alignment:
Q  119 aatcttagaccatttacagtggttaaatatattcaataatcttcaacatccactttttcaattc-caacactccacatcattttctctctct 209  Q
    ||||| |||||||||| | |||||||| |||||||| || | |||| | | | ||||||||||| ||||||||||| |||||||||||||||    
T  31336471 aatctaagaccatttataatggttaaacatattcaacaaccctcaatacctattttttcaattctcaacactccacgtcattttctctctct 31336380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 160 - 209
Target Start/End: Complemental strand, 2215358 - 2215308
Alignment:
Q  160 ttcaacatccactttttcaattcc-aacactccacatcattttctctctct 209  Q
    ||||||| |||||||||||||||| |||||||||||| |||||||||||||    
T  2215358 ttcaacacccactttttcaattcccaacactccacataattttctctctct 2215308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 160 - 209
Target Start/End: Original strand, 12158134 - 12158184
Alignment:
Q  160 ttcaacatccactttttcaattcc-aacactccacatcattttctctctct 209  Q
    |||||||||||| ||||| ||||| ||||||||||||||||||||||||||    
T  12158134 ttcaacatccacattttcgattcccaacactccacatcattttctctctct 12158184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 160 - 205
Target Start/End: Complemental strand, 39049159 - 39049113
Alignment:
Q  160 ttcaacatccactttttcaatt-ccaacactccacatcattttctct 205  Q
    ||||||||||||||||| |||| ||||||||||||||||||||||||    
T  39049159 ttcaacatccacttttttaatttccaacactccacatcattttctct 39049113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 123 - 207
Target Start/End: Complemental strand, 39113868 - 39113783
Alignment:
Q  123 ttagaccatttacagtggttaaatatattcaataatcttcaacatccactttttcaattcc-aacactccacatcattttctctct 207  Q
    |||||||||||||| |||| ||| | |||||| ||   ||||||   |||||||||||||| ||||||||||||||||||||||||    
T  39113868 ttagaccatttacaatggtgaaaaacattcaacaacactcaacactaactttttcaattcccaacactccacatcattttctctct 39113783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 122 - 209
Target Start/End: Original strand, 13110519 - 13110607
Alignment:
Q  122 cttagaccatttacagtggttaaatatattcaataatcttcaacatccactttttcaattcc-aacactccacatcattttctctctct 209  Q
    ||||||||||||||| |||| | | |||||||| ||   | |||| |||||||||||||||| ||||||||||| |||||| |||||||    
T  13110519 cttagaccatttacaatggtcacaaatattcaacaacgcttaacacccactttttcaattcccaacactccacaacattttttctctct 13110607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 122 - 209
Target Start/End: Complemental strand, 16175129 - 16175041
Alignment:
Q  122 cttagaccatttacagtggttaaatatattcaataatcttcaacatccactttttcaattc-caacactccacatcattttctctctct 209  Q
    |||||||||| |||| || | ||| | |||||| || |||||||| ||| ||||||||||  |||||||||||||||||||||| ||||    
T  16175129 cttagaccatgtacaatgctaaaacaaattcaacaaccttcaacacccattttttcaattttcaacactccacatcattttctcactct 16175041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 209
Target Start/End: Complemental strand, 31848838 - 31848800
Alignment:
Q  172 tttttcaatt-ccaacactccacatcattttctctctct 209  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  31848838 tttttcaatttccaacactccacatcattttctctctct 31848800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 209
Target Start/End: Original strand, 52017308 - 52017390
Alignment:
Q  128 ccatttacagtggttaaatatattcaataatcttcaacatccactttttcaattcc-aacactccacatcattttctctctct 209  Q
    ||||||||| |||| | | |||||||| || | | |||| | |||||||||||||| ||||||| ||||||||||||||||||    
T  52017308 ccatttacaatggtcacaaatattcaacaacccttaacacctactttttcaattcctaacactcaacatcattttctctctct 52017390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 207
Target Start/End: Original strand, 52772739 - 52772797
Alignment:
Q  149 attcaataatcttcaacatccactttttcaattccaacactccacatcattttctctct 207  Q
    |||||| || ||| |||| ||| ||||||||||| |||||||||||| |||||||||||    
T  52772739 attcaacaacctttaacacccattttttcaattctaacactccacattattttctctct 52772797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 209
Target Start/End: Complemental strand, 53184164 - 53184122
Alignment:
Q  168 ccactttttcaattcc-aacactccacatcattttctctctct 209  Q
    |||||||||||||||| |||||| |||||||||||||||||||    
T  53184164 ccactttttcaattcccaacacttcacatcattttctctctct 53184122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 160 - 208
Target Start/End: Complemental strand, 23390005 - 23389956
Alignment:
Q  160 ttcaacatccactttttcaattcc-aacactccacatcattttctctctc 208  Q
    |||||||  ||||||||||||||| |||||||||||| ||||||||||||    
T  23390005 ttcaacactcactttttcaattcccaacactccacattattttctctctc 23389956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 203
Target Start/End: Original strand, 33526713 - 33526757
Alignment:
Q  160 ttcaacatccactttttcaattc-caacactccacatcattttct 203  Q
    ||||||||||||||||||||||| |||||||||  ||||||||||    
T  33526713 ttcaacatccactttttcaattctcaacactccgtatcattttct 33526757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 58; Significance: 1e-24; HSPs: 53)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 125 - 209
Target Start/End: Complemental strand, 30418540 - 30418455
Alignment:
Q  125 agaccatttacagtggttaaatatattcaataatcttcaacatccactttttcaatt-ccaacactccacatcattttctctctct 209  Q
    |||||||||||| |||| ||||| ||||||||| |||||||| |||||||||||||| ||||||||||||||||||||||||||||    
T  30418540 agaccatttacaatggtaaaatacattcaataaccttcaacacccactttttcaattcccaacactccacatcattttctctctct 30418455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 125 - 209
Target Start/End: Original strand, 50733978 - 50734063
Alignment:
Q  125 agaccatttacagtggttaaatatattcaataatcttcaacatccactttttcaa-ttccaacactccacatcattttctctctct 209  Q
    |||||||||||| |||| |||||||||||| |||| ||||||||||||||||||| |||||| |||||||||||||||||||||||    
T  50733978 agaccatttacaatggtaaaatatattcaacaatcctcaacatccactttttcaatttccaaaactccacatcattttctctctct 50734063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 125 - 209
Target Start/End: Complemental strand, 50778877 - 50778792
Alignment:
Q  125 agaccatttacagtggttaaatatattcaataatcttcaacatccactttttcaa-ttccaacactccacatcattttctctctct 209  Q
    |||||||||||| |||| |||||||||||| |||| ||||||||||||||||||| |||||| |||||||||||||||||||||||    
T  50778877 agaccatttacaatggtaaaatatattcaacaatcctcaacatccactttttcaatttccaaaactccacatcattttctctctct 50778792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 121 - 209
Target Start/End: Complemental strand, 51999352 - 51999263
Alignment:
Q  121 tcttagaccatttacagtggttaaatatattcaataatcttcaacatccactttttcaatt-ccaacactccacatcattttctctctct 209  Q
    |||||||||||||||| |||  |||||||||||| || |||||||| |||||||||||||| ||||||||||||||||||||||||||||    
T  51999352 tcttagaccatttacaatggcaaaatatattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctct 51999263  T

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Target: chr3; HSP #5
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 123 - 209
Target Start/End: Complemental strand, 50415943 - 50415856
Alignment:
Q  123 ttagaccatttacagtggttaaatatattcaataatcttcaacatccactttttcaa-ttccaacactccacatcattttctctctct 209  Q
    |||||||||||||| |||| ||||| |||||| || |||||||| |||||||||||| ||||||||||||||||||||||||||||||    
T  50415943 ttagaccatttacaatggtaaaatacattcaacaaccttcaacacccactttttcaatttccaacactccacatcattttctctctct 50415856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 125 - 209
Target Start/End: Original strand, 29701644 - 29701729
Alignment:
Q  125 agaccatttacagtggttaaatatattcaataatcttcaacatccactttttcaatt-ccaacactccacatcattttctctctct 209  Q
    |||||||||||| |||| ||||| |||||| || |||||||| |||||||||||||| ||||||||||||||||||||||||||||    
T  29701644 agaccatttacaatggtaaaatacattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctct 29701729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 122 - 209
Target Start/End: Original strand, 44084268 - 44084356
Alignment:
Q  122 cttagaccatttacagtggttaaatatattcaataatcttcaacatccactttttcaatt-ccaacactccacatcattttctctctct 209  Q
    ||||||||||||||| |||| ||| | |||||| || |||||||| |||||||||||||| ||||||||||||||||||||||||||||    
T  44084268 cttagaccatttacaatggtaaaacaaattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctct 44084356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 125 - 209
Target Start/End: Complemental strand, 32120549 - 32120464
Alignment:
Q  125 agaccatttacagtggttaaatatattcaataatcttcaacatccactttttcaatt-ccaacactccacatcattttctctctct 209  Q
    |||||||||||| |||| ||| | |||||| || |||||||| |||||||||||||| ||||||||||||||||||||||||||||    
T  32120549 agaccatttacaatggtaaaacaaattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctct 32120464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 125 - 209
Target Start/End: Original strand, 43473852 - 43473937
Alignment:
Q  125 agaccatttacagtggttaaatatattcaataatcttcaacatccactttttcaatt-ccaacactccacatcattttctctctct 209  Q
    |||||||||||| |||||||| |||||||| || | ||||||||||||||||||||| |||||| |||| ||||||||||||||||    
T  43473852 agaccatttacaatggttaaacatattcaacaaccctcaacatccactttttcaattcccaacattccagatcattttctctctct 43473937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 122 - 209
Target Start/End: Complemental strand, 6048810 - 6048722
Alignment:
Q  122 cttagaccatttacagtggttaaatatattcaataatcttcaacatccactttttcaatt-ccaacactccacatcattttctctctct 209  Q
    ||||||||||||||| |||| |   |||||||| || |||||||| |||||||||||||| ||||||||||||||||||||||||||||    
T  6048810 cttagaccatttacaatggtaactaatattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctct 6048722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 125 - 208
Target Start/End: Complemental strand, 26165665 - 26165581
Alignment:
Q  125 agaccatttacagtggttaaatatattcaataatcttcaacatccactttttcaatt-ccaacactccacatcattttctctctc 208  Q
    ||||||| |||| |||  |||||| |||||||  ||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  26165665 agaccatgtacaatgggaaaatattttcaatacccttcaacatccactttttcaattcccaacactccacatcattttctctctc 26165581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 123 - 209
Target Start/End: Complemental strand, 37183950 - 37183863
Alignment:
Q  123 ttagaccatttacagtggttaaatatattcaataatcttcaacatccactttttcaattcc-aacactccacatcattttctctctct 209  Q
    |||||||||||||| |||  |||||||||||| || | ||||||  ||||||||||||||| ||||||||||||||||||||||||||    
T  37183950 ttagaccatttacaatggcaaaatatattcaacaaccctcaacactcactttttcaattcctaacactccacatcattttctctctct 37183863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 149 - 209
Target Start/End: Original strand, 4045966 - 4046027
Alignment:
Q  149 attcaataatcttcaacatccactttttcaattcc-aacactccacatcattttctctctct 209  Q
    |||||| || ||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  4045966 attcaacaaccttcaacatccactttttcaattcccaacactccacatcattttctctctct 4046027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 125 - 209
Target Start/End: Original strand, 27847371 - 27847456
Alignment:
Q  125 agaccatttacagtggttaaatatattcaataatcttcaacatccactttttcaatt-ccaacactccacatcattttctctctct 209  Q
    ||||||| |||| |||  ||| ||||||||||  | ||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  27847371 agaccatgtacaatggaaaaaaatattcaatacccctcaacatccactttttcaatttccaacactccacatcattttctctctct 27847456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 122 - 209
Target Start/End: Original strand, 7008014 - 7008102
Alignment:
Q  122 cttagaccatttacagtggttaaatatattcaataatcttcaacatccactttttcaa-ttccaacactccacatcattttctctctct 209  Q
    ||||||||||||||| |||| ||| | |||||| || | |||||| |||||||||||| ||||||||||| ||||||||||||||||||    
T  7008014 cttagaccatttacaatggtaaaacaaattcaacaaccctcaacacccactttttcaatttccaacactctacatcattttctctctct 7008102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 138 - 209
Target Start/End: Original strand, 12974643 - 12974715
Alignment:
Q  138 tggttaaatatattcaataatcttcaacatccactttttcaattcc-aacactccacatcattttctctctct 209  Q
    |||||||| || |||||||  |||||||| |||||||||||||||| ||||||||||||||||||||||||||    
T  12974643 tggttaaaaattttcaatacccttcaacacccactttttcaattcccaacactccacatcattttctctctct 12974715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 123 - 209
Target Start/End: Original strand, 41183234 - 41183321
Alignment:
Q  123 ttagaccatttacagtggttaaatatattcaataatcttcaacatccactttttcaattcc-aacactccacatcattttctctctct 209  Q
    ||||| |||||||| |||| | | |||||||| || | |||||| |||||||||||||||| ||||||||||||||||||||||||||    
T  41183234 ttagatcatttacaatggtcacaaatattcaacaaccctcaacacccactttttcaattcccaacactccacatcattttctctctct 41183321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 122 - 207
Target Start/End: Complemental strand, 10426545 - 10426459
Alignment:
Q  122 cttagaccatttacagtggttaaatatattcaataatcttcaacatccactttttcaattcc-aacactccacatcattttctctct 207  Q
    ||||||| ||||| | |||  |||||||||||| || |||||||| ||| |||||||||||| ||||||||||||||||||||||||    
T  10426545 cttagactatttataatggcaaaatatattcaacaaccttcaacacccattttttcaattcccaacactccacatcattttctctct 10426459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 125 - 209
Target Start/End: Complemental strand, 46573036 - 46572951
Alignment:
Q  125 agaccatttacagtggttaaatatattcaataatcttcaacatccactttttcaattcc-aacactccacatcattttctctctct 209  Q
    ||||||| |||| |||| ||| | |||||| ||  ||||||| |||||||||||||||| ||||||||||||||||||||||||||    
T  46573036 agaccatctacaatggtgaaaaacattcaacaacattcaacacccactttttcaattcccaacactccacatcattttctctctct 46572951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 149 - 208
Target Start/End: Complemental strand, 35472713 - 35472653
Alignment:
Q  149 attcaataatcttcaacatccactttttcaatt-ccaacactccacatcattttctctctc 208  Q
    ||||||||  ||||||||||||||||||||||| |||||||||||||| ||||||||||||    
T  35472713 attcaatacccttcaacatccactttttcaattcccaacactccacattattttctctctc 35472653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 125 - 203
Target Start/End: Original strand, 6832346 - 6832425
Alignment:
Q  125 agaccatttacagtggttaaatatattcaataatcttcaacatccactttttcaatt-ccaacactccacatcattttct 203  Q
    |||||||||||| ||||| || || || || || | ||||||||||||||||||||| ||||||||||||||||||||||    
T  6832346 agaccatttacattggttcaacatttttaacaaccctcaacatccactttttcaattcccaacactccacatcattttct 6832425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 160 - 209
Target Start/End: Original strand, 17466512 - 17466562
Alignment:
Q  160 ttcaacatccactttttcaattcc-aacactccacatcattttctctctct 209  Q
    ||||||| |||||||||||||||| ||||||||||||||||||||||||||    
T  17466512 ttcaacacccactttttcaattcccaacactccacatcattttctctctct 17466562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 160 - 209
Target Start/End: Complemental strand, 25790851 - 25790801
Alignment:
Q  160 ttcaacatccactttttcaattcc-aacactccacatcattttctctctct 209  Q
    ||||||| |||||||||||||||| ||||||||||||||||||||||||||    
T  25790851 ttcaacacccactttttcaattcccaacactccacatcattttctctctct 25790801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 160 - 209
Target Start/End: Original strand, 42601758 - 42601808
Alignment:
Q  160 ttcaacatccactttttcaattcc-aacactccacatcattttctctctct 209  Q
    ||||||| |||||||||||||||| ||||||||||||||||||||||||||    
T  42601758 ttcaacacccactttttcaattcccaacactccacatcattttctctctct 42601808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 160 - 209
Target Start/End: Original strand, 47144170 - 47144220
Alignment:
Q  160 ttcaacatccactttttcaattcc-aacactccacatcattttctctctct 209  Q
    ||||||| |||||||||||||||| ||||||||||||||||||||||||||    
T  47144170 ttcaacacccactttttcaattcccaacactccacatcattttctctctct 47144220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 160 - 209
Target Start/End: Complemental strand, 49147364 - 49147314
Alignment:
Q  160 ttcaacatccactttttcaattcc-aacactccacatcattttctctctct 209  Q
    ||||||||| |||||||||||||| ||||||||||||||||||||||||||    
T  49147364 ttcaacatctactttttcaattcccaacactccacatcattttctctctct 49147314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 149 - 209
Target Start/End: Original strand, 42560887 - 42560948
Alignment:
Q  149 attcaataatcttcaacatccactttttcaattcc-aacactccacatcattttctctctct 209  Q
    |||||| || |||||||| |||||||||||||||| |||| |||||||||||||||||||||    
T  42560887 attcaacaaccttcaacacccactttttcaattcccaacattccacatcattttctctctct 42560948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 150 - 208
Target Start/End: Original strand, 11908006 - 11908065
Alignment:
Q  150 ttcaataatcttcaacatccactttttcaatt-ccaacactccacatcattttctctctc 208  Q
    |||||||  |||||||| |||||||||||||| |||||||||||||||||||| ||||||    
T  11908006 ttcaatacccttcaacacccactttttcaatttccaacactccacatcattttttctctc 11908065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 123 - 209
Target Start/End: Complemental strand, 38572267 - 38572180
Alignment:
Q  123 ttagaccatttacagtggttaaatatattcaataatcttcaacatccactttttcaattc-caacactccacatcattttctctctct 209  Q
    |||||||||||||| |||| ||| | |||||| || | |||| | | ||||||||||||| ||||||||||||| |||||||||||||    
T  38572267 ttagaccatttacaatggtaaaacaaattcaacaaccctcaatacctactttttcaattctcaacactccacattattttctctctct 38572180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 160 - 209
Target Start/End: Complemental strand, 5845216 - 5845166
Alignment:
Q  160 ttcaacatccactttttcaattcc-aacactccacatcattttctctctct 209  Q
    ||||||| |||||||||||||||| |||||||||||||||||| |||||||    
T  5845216 ttcaacacccactttttcaattcccaacactccacatcattttatctctct 5845166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 168 - 209
Target Start/End: Original strand, 33934996 - 33935038
Alignment:
Q  168 ccactttttcaattcc-aacactccacatcattttctctctct 209  Q
    |||||||||||||||| ||||||||||||||||||||||||||    
T  33934996 ccactttttcaattcccaacactccacatcattttctctctct 33935038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 160 - 209
Target Start/End: Complemental strand, 35424085 - 35424035
Alignment:
Q  160 ttcaacatccactttttcaattcc-aacactccacatcattttctctctct 209  Q
    ||||||||||| |||||||||||| |||||||||||||||||| |||||||    
T  35424085 ttcaacatccattttttcaattcccaacactccacatcattttttctctct 35424035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 160 - 209
Target Start/End: Original strand, 41890532 - 41890581
Alignment:
Q  160 ttcaacatccactttttcaattcc-aacactccacatcattttctctctct 209  Q
    ||||||||| |||||||||||||| ||||||||||||||||||||||||||    
T  41890532 ttcaacatc-actttttcaattcccaacactccacatcattttctctctct 41890581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 168 - 209
Target Start/End: Complemental strand, 42601573 - 42601531
Alignment:
Q  168 ccactttttcaattcc-aacactccacatcattttctctctct 209  Q
    |||||||||||||||| ||||||||||||||||||||||||||    
T  42601573 ccactttttcaattcccaacactccacatcattttctctctct 42601531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 168 - 209
Target Start/End: Complemental strand, 49823238 - 49823196
Alignment:
Q  168 ccactttttcaattcc-aacactccacatcattttctctctct 209  Q
    |||||||||||||||| ||||||||||||||||||||||||||    
T  49823238 ccactttttcaattcccaacactccacatcattttctctctct 49823196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 168 - 209
Target Start/End: Original strand, 51427105 - 51427147
Alignment:
Q  168 ccactttttcaattcc-aacactccacatcattttctctctct 209  Q
    |||||||||||||||| ||||||||||||||||||||||||||    
T  51427105 ccactttttcaattcccaacactccacatcattttctctctct 51427147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 161 - 209
Target Start/End: Original strand, 138973 - 139022
Alignment:
Q  161 tcaacatccactttttcaattcc-aacactccacatcattttctctctct 209  Q
    ||||||||| ||||||||||||| |||||||||||||||||| |||||||    
T  138973 tcaacatccgctttttcaattcccaacactccacatcattttgtctctct 139022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 124 - 208
Target Start/End: Complemental strand, 52000174 - 52000089
Alignment:
Q  124 tagaccatttacagtggttaaatatattcaataatcttcaacatccactttttcaattcc-aacactccacatcattttctctctc 208  Q
    |||| ||| |||| |||||| | || |||||||| |||||||||  | ||||| |||||| |||||||||||||||||||||||||    
T  52000174 tagatcatgtacaatggttacaaattttcaataaccttcaacatttatttttttaattcccaacactccacatcattttctctctc 52000089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 121 - 209
Target Start/End: Original strand, 55026697 - 55026786
Alignment:
Q  121 tcttagaccatttacagtggttaaatatattcaataatcttcaacatccactttttcaattc-caacactccacatcattttctctctct 209  Q
    |||||||| ||||||| |||| ||||| |||||| || | |||||| ||| ||||||||||  ||||||| ||| |||||||||||||||    
T  55026697 tcttagactatttacaatggtaaaataaattcaacaaccctcaacacccattttttcaattttcaacacttcacttcattttctctctct 55026786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 122 - 209
Target Start/End: Original strand, 20139319 - 20139407
Alignment:
Q  122 cttagaccatttacagtggttaaatatattcaataatcttcaacatccactttttcaattc-caacactccacatcattttctctctct 209  Q
    |||||||||| |||| ||||||||   |||||| ||   |||| | ||||||||||||||| ||||||| |||||||||||||||||||    
T  20139319 cttagaccatctacaatggttaaaaccattcaacaacactcaatacccactttttcaattctcaacacttcacatcattttctctctct 20139407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 209
Target Start/End: Original strand, 744225 - 744263
Alignment:
Q  172 tttttcaatt-ccaacactccacatcattttctctctct 209  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  744225 tttttcaattaccaacactccacatcattttctctctct 744263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 209
Target Start/End: Complemental strand, 25450710 - 25450660
Alignment:
Q  160 ttcaacatccactttttcaattcc-aacactccacatcattttctctctct 209  Q
    ||||||| ||| |||||||||||| ||| ||||||||||||||||||||||    
T  25450710 ttcaacacccattttttcaattcccaacgctccacatcattttctctctct 25450660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 209
Target Start/End: Complemental strand, 25832792 - 25832750
Alignment:
Q  168 ccactttttcaattcc-aacactccacatcattttctctctct 209  Q
    |||||||||||||||| |||||| |||||||||||||||||||    
T  25832792 ccactttttcaattcccaacacttcacatcattttctctctct 25832750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 208
Target Start/End: Complemental strand, 36178781 - 36178731
Alignment:
Q  159 cttcaacatccactttttcaatt-ccaacactccacatcattttctctctc 208  Q
    |||||||| |||||||||||||| |||||||| || |||||||||||||||    
T  36178781 cttcaacacccactttttcaattcccaacacttcaaatcattttctctctc 36178731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 183
Target Start/End: Complemental strand, 48887092 - 48887034
Alignment:
Q  125 agaccatttacagtggttaaatatattcaataatcttcaacatccactttttcaattcc 183  Q
    ||||||| |||| ||||| || || ||||| || |||||||||||||||||||||||||    
T  48887092 agaccatatacaatggttgaaaattttcaacaaccttcaacatccactttttcaattcc 48887034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 205
Target Start/End: Original strand, 50017050 - 50017096
Alignment:
Q  160 ttcaacatccactttttcaatt-ccaacactccacatcattttctct 205  Q
    ||||| |||||||||||||||| ||||||||| ||||||||||||||    
T  50017050 ttcaaaatccactttttcaattcccaacactctacatcattttctct 50017096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 209
Target Start/End: Complemental strand, 30692475 - 30692438
Alignment:
Q  172 tttttcaattccaacactccacatcattttctctctct 209  Q
    |||||||||| |||||||| ||||||||||||||||||    
T  30692475 tttttcaatttcaacactcaacatcattttctctctct 30692438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 161 - 209
Target Start/End: Complemental strand, 35853267 - 35853218
Alignment:
Q  161 tcaacatccactttttcaattcc-aacactccacatcattttctctctct 209  Q
    |||||| ||||||||||  |||| ||||||||||||||||||||||||||    
T  35853267 tcaacacccactttttctcttcccaacactccacatcattttctctctct 35853218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 161 - 209
Target Start/End: Original strand, 42258315 - 42258364
Alignment:
Q  161 tcaacatccactttttcaattcc-aacactccacatcattttctctctct 209  Q
    |||||| ||||||||||  |||| ||||||||||||||||||||||||||    
T  42258315 tcaacacccactttttctcttcccaacactccacatcattttctctctct 42258364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 161 - 209
Target Start/End: Original strand, 43022646 - 43022695
Alignment:
Q  161 tcaacatccactttttcaattcc-aacactccacatcattttctctctct 209  Q
    |||||| ||||||||||  |||| ||||||||||||||||||||||||||    
T  43022646 tcaacacccactttttctcttcccaacactccacatcattttctctctct 43022695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 161 - 201
Target Start/End: Complemental strand, 47701138 - 47701097
Alignment:
Q  161 tcaacatccactttttcaattc-caacactccacatcatttt 201  Q
    |||||| ||||||||||||||| |||||||||||||||||||    
T  47701138 tcaacacccactttttcaattctcaacactccacatcatttt 47701097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 161 - 209
Target Start/End: Complemental strand, 49710464 - 49710415
Alignment:
Q  161 tcaacatccactttttcaattcc-aacactccacatcattttctctctct 209  Q
    |||||| ||||||||||  |||| ||||||||||||||||||||||||||    
T  49710464 tcaacacccactttttctcttcccaacactccacatcattttctctctct 49710415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 207
Target Start/End: Original strand, 33748694 - 33748730
Alignment:
Q  172 tttttcaatt-ccaacactccacatcattttctctct 207  Q
    |||||||||| ||||||||||||||||||||||||||    
T  33748694 tttttcaatttccaacactccacatcattttctctct 33748730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 54; Significance: 3e-22; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 125 - 209
Target Start/End: Original strand, 34838541 - 34838626
Alignment:
Q  125 agaccatttacagtggttaaatatattcaataatcttcaacatccactttttcaatt-ccaacactccacatcattttctctctct 209  Q
    |||||||||||| |||| ||||| ||||||||| ||||||||  ||||||||||||| ||||||||||||||||||||||||||||    
T  34838541 agaccatttacaatggtaaaatacattcaataaccttcaacactcactttttcaattcccaacactccacatcattttctctctct 34838626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 122 - 209
Target Start/End: Original strand, 8669847 - 8669935
Alignment:
Q  122 cttagaccatttacagtggttaaatatattcaataatcttcaacatccactttttcaa-ttccaacactccacatcattttctctctct 209  Q
    |||||| |||||||| |||| ||||| |||||| || ||||||||||||||||||||| |||||||||| ||||| |||||||||||||    
T  8669847 cttagatcatttacaatggtaaaatacattcaacaaccttcaacatccactttttcaatttccaacacttcacattattttctctctct 8669935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 121 - 207
Target Start/End: Original strand, 24348389 - 24348476
Alignment:
Q  121 tcttagaccatttacagtggttaaatatattcaataatcttcaacatccactttttcaatt-ccaacactccacatcattttctctct 207  Q
    ||||||||||| |||| ||||| || || |||||||| | |||||| |||||||||||||| ||||||||||||||||||||||||||    
T  24348389 tcttagaccatatacaatggttgaaaattttcaataaccatcaacacccactttttcaattcccaacactccacatcattttctctct 24348476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 125 - 209
Target Start/End: Original strand, 10883832 - 10883917
Alignment:
Q  125 agaccatttacagtggttaaatatattcaataatcttcaacatccactttttcaatt-ccaacactccacatcattttctctctct 209  Q
    |||||||||||| ||||| || |  ||||| || | ||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  10883832 agaccatttacaatggttgaaaagtttcaacaaccctcaacatccactttttcaatttccaacactccacatcattttctctctct 10883917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 121 - 209
Target Start/End: Original strand, 30446200 - 30446289
Alignment:
Q  121 tcttagaccatttacagtggttaaatatattcaataatcttcaacatccactttttcaattcc-aacactccacatcattttctctctct 209  Q
    |||||||||||||||| |||| ||| | |||||| || | |||||| ||| |||||||||||| ||||||||||||||||||||||||||    
T  30446200 tcttagaccatttacaatggtaaaacaaattcaacaaccctcaacacccattttttcaattcctaacactccacatcattttctctctct 30446289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 122 - 209
Target Start/End: Original strand, 8660516 - 8660604
Alignment:
Q  122 cttagaccatttacagtggttaaatatattcaataatcttcaacatccactttttcaattcc-aacactccacatcattttctctctct 209  Q
    ||||||||||||||| | || |||   |||||| || |||||||| |||||||||||||||| ||||||||||||||||||||||||||    
T  8660516 cttagaccatttacaattgtaaaacccattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctct 8660604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 160 - 209
Target Start/End: Complemental strand, 29428594 - 29428544
Alignment:
Q  160 ttcaacatccactttttcaattcc-aacactccacatcattttctctctct 209  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  29428594 ttcaacatccactttttcaattcccaacactccacatcattttctctctct 29428544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 160 - 209
Target Start/End: Original strand, 197799 - 197849
Alignment:
Q  160 ttcaacatccactttttcaatt-ccaacactccacatcattttctctctct 209  Q
    |||||||||||||||||||||| |||||||||||| |||||||||||||||    
T  197799 ttcaacatccactttttcaattcccaacactccacgtcattttctctctct 197849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 160 - 209
Target Start/End: Original strand, 631513 - 631563
Alignment:
Q  160 ttcaacatccactttttcaattcc-aacactccacatcattttctctctct 209  Q
    ||||||| |||||||||||||||| ||||||||||||||||||||||||||    
T  631513 ttcaacacccactttttcaattcccaacactccacatcattttctctctct 631563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 150 - 208
Target Start/End: Complemental strand, 24933369 - 24933311
Alignment:
Q  150 ttcaataatcttcaacatccactttttcaattccaacactccacatcattttctctctc 208  Q
    |||||||  |||||||||||| |||||||||| ||||||||||||| ||||||||||||    
T  24933369 ttcaatatccttcaacatccattttttcaatttcaacactccacattattttctctctc 24933311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 121 - 209
Target Start/End: Original strand, 12480273 - 12480362
Alignment:
Q  121 tcttagaccatttacagtggttaaatatattcaataatcttcaacatccactttttcaa-ttccaacactccacatcattttctctctct 209  Q
    |||||||||||||||| ||||| || |  ||||| || | ||||||||||||||||||| ||| ||||||| ||||||||||||| ||||    
T  12480273 tcttagaccatttacaatggttgaaaagtttcaacaaccctcaacatccactttttcaatttcaaacactctacatcattttctcactct 12480362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 168 - 209
Target Start/End: Complemental strand, 6380557 - 6380515
Alignment:
Q  168 ccactttttcaattcc-aacactccacatcattttctctctct 209  Q
    |||||||||||||||| ||||||||||||||||||||||||||    
T  6380557 ccactttttcaattcccaacactccacatcattttctctctct 6380515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 160 - 209
Target Start/End: Complemental strand, 17961340 - 17961290
Alignment:
Q  160 ttcaacatccactttttcaattcc-aacactccacatcattttctctctct 209  Q
    ||||||| |||||||||||||||| |||||||||||| |||||||||||||    
T  17961340 ttcaacacccactttttcaattcccaacactccacataattttctctctct 17961290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 160 - 209
Target Start/End: Original strand, 34328276 - 34328326
Alignment:
Q  160 ttcaacatccactttttcaattcc-aacactccacatcattttctctctct 209  Q
    ||||||| |||||||||||||||| |||||||||||||||||| |||||||    
T  34328276 ttcaacacccactttttcaattcccaacactccacatcattttatctctct 34328326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 121 - 209
Target Start/End: Original strand, 12501788 - 12501877
Alignment:
Q  121 tcttagaccatttacagtggttaaatatattcaataatcttcaacatccactttttcaattc-caacactccacatcattttctctctct 209  Q
    |||||||||||||| | ||||| || |  ||||| || | ||| || ||||||||||||||| ||||| |||||||||||||||||||||    
T  12501788 tcttagaccatttataatggttgaaaagtttcaacaaccctcaccacccactttttcaattctcaacaatccacatcattttctctctct 12501877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 161 - 207
Target Start/End: Original strand, 22627832 - 22627879
Alignment:
Q  161 tcaacatccactttttcaatt-ccaacactccacatcattttctctct 207  Q
    |||||| |||| ||||||||| ||||||||||||||||||||||||||    
T  22627832 tcaacacccacgttttcaatttccaacactccacatcattttctctct 22627879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 161 - 209
Target Start/End: Complemental strand, 6725700 - 6725651
Alignment:
Q  161 tcaacatccactttttcaattcc-aacactccacatcattttctctctct 209  Q
    |||||| ||||||||||  |||| ||||||||||||||||||||||||||    
T  6725700 tcaacacccactttttctcttcccaacactccacatcattttctctctct 6725651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 54; Significance: 3e-22; HSPs: 33)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 125 - 209
Target Start/End: Complemental strand, 51494583 - 51494498
Alignment:
Q  125 agaccatttacagtggttaaatatattcaataatcttcaacatccactttttcaattc-caacactccacatcattttctctctct 209  Q
    |||||||||||| |||| |||||||||||| || |||||||| ||||||||| ||||| |||||||||||||||||||||||||||    
T  51494583 agaccatttacaatggtaaaatatattcaacaaccttcaacacccacttttttaattctcaacactccacatcattttctctctct 51494498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 125 - 209
Target Start/End: Complemental strand, 2478439 - 2478354
Alignment:
Q  125 agaccatttacagtggttaaatatattcaataatcttcaacatccactttttcaatt-ccaacactccacatcattttctctctct 209  Q
    |||||||||||| |||| ||| | |||||| || |||||||| |||||||||||||| ||||||||||||||||||||||||||||    
T  2478439 agaccatttacaatggtaaaacaaattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctct 2478354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 123 - 209
Target Start/End: Original strand, 29919326 - 29919413
Alignment:
Q  123 ttagaccatttacagtggttaaatatattcaataatcttcaacatccactttttcaatt-ccaacactccacatcattttctctctct 209  Q
    |||||||||||||| |||  |||||||||||| || | |||||||| |||||||||||| ||||||||||| ||||||||||||||||    
T  29919326 ttagaccatttacaatggcaaaatatattcaacaaacctcaacatctactttttcaattcccaacactccatatcattttctctctct 29919413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 125 - 209
Target Start/End: Original strand, 23092727 - 23092812
Alignment:
Q  125 agaccatttacagtggttaaatatattcaataatcttcaacatccactttttcaatt-ccaacactccacatcattttctctctct 209  Q
    |||||||||||| |||  ||||||||||||||  | |||||| |||||||||||||| |||||||||||| |||||||||||||||    
T  23092727 agaccatttacaatggcaaaatatattcaatacccctcaacacccactttttcaattcccaacactccacgtcattttctctctct 23092812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 125 - 209
Target Start/End: Complemental strand, 45456262 - 45456177
Alignment:
Q  125 agaccatttacagtggttaaatatattcaataatcttcaacatccactttttcaatt-ccaacactccacatcattttctctctct 209  Q
    |||||||||||| ||||| || || |||||||| | |||||| |||||||||||||| |||||||||||||| |||||||||||||    
T  45456262 agaccatttacaatggttgaaaattttcaataaccctcaacacccactttttcaattcccaacactccacataattttctctctct 45456177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 125 - 209
Target Start/End: Complemental strand, 45623641 - 45623556
Alignment:
Q  125 agaccatttacagtggttaaatatattcaataatcttcaacatccactttttcaattcc-aacactccacatcattttctctctct 209  Q
    |||||||||||| |||  |||||||||||| ||   |||||||| |||||||||||||| ||||||||||||||||||||||||||    
T  45623641 agaccatttacaatggcaaaatatattcaacaactctcaacatctactttttcaattcctaacactccacatcattttctctctct 45623556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 125 - 209
Target Start/End: Complemental strand, 48388219 - 48388134
Alignment:
Q  125 agaccatttacagtggttaaatatattcaataatcttcaacatccactttttcaattcc-aacactccacatcattttctctctct 209  Q
    |||||||||||| |||| |   |||||||| || |||||||| |||||||||||||||| ||||||||||||||||||||||||||    
T  48388219 agaccatttacaatggtaactaatattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctct 48388134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 122 - 209
Target Start/End: Original strand, 14096646 - 14096734
Alignment:
Q  122 cttagaccatttacagtggttaaatatattcaataatcttcaacatccactttttcaatt-ccaacactccacatcattttctctctct 209  Q
    |||||| |||||||| |||  |||||||||||| ||||||||||| | |||||||||||| ||||||||||| |||||||| |||||||    
T  14096646 cttagatcatttacaatggcaaaatatattcaacaatcttcaacacctactttttcaattcccaacactccaaatcattttatctctct 14096734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 160 - 209
Target Start/End: Original strand, 8464092 - 8464142
Alignment:
Q  160 ttcaacatccactttttcaattc-caacactccacatcattttctctctct 209  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  8464092 ttcaacatccactttttcaattctcaacactccacatcattttctctctct 8464142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 160 - 209
Target Start/End: Original strand, 44334282 - 44334332
Alignment:
Q  160 ttcaacatccactttttcaattc-caacactccacatcattttctctctct 209  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  44334282 ttcaacatccactttttcaattctcaacactccacatcattttctctctct 44334332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 121 - 209
Target Start/End: Original strand, 8468278 - 8468367
Alignment:
Q  121 tcttagaccatttacagtggttaaatatattcaataatcttcaacatccactttttcaattcc-aacactccacatcattttctctctct 209  Q
    ||||||||||||   | |||||||| | |||||| || | |||||| |||||||||||||||| ||||||||||||||||||||||||||    
T  8468278 tcttagaccattgtaaatggttaaaaacattcaacaaccctcaacacccactttttcaattcccaacactccacatcattttctctctct 8468367  T

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Target: chr1; HSP #12
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 161 - 209
Target Start/End: Complemental strand, 19578985 - 19578936
Alignment:
Q  161 tcaacatccactttttcaattcc-aacactccacatcattttctctctct 209  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  19578985 tcaacatccactttttcaattcccaacactccacatcattttctctctct 19578936  T

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Target: chr1; HSP #13
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 121 - 209
Target Start/End: Complemental strand, 30878659 - 30878570
Alignment:
Q  121 tcttagaccatttacagtggttaaatatattcaataatcttcaacatccactttttcaatt-ccaacactccacatcattttctctctct 209  Q
    |||||||||||||||| |  || || || ||||| || | |||||| |||||||||||||| ||||||||||||||||||||||||||||    
T  30878659 tcttagaccatttacaatattttaaaattttcaacaaccctcaacacccactttttcaatttccaacactccacatcattttctctctct 30878570  T

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Target: chr1; HSP #14
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 125 - 209
Target Start/End: Original strand, 31159345 - 31159430
Alignment:
Q  125 agaccatttacagtggttaaatatattcaataatcttcaacatccactttttcaattcc-aacactccacatcattttctctctct 209  Q
    |||||||||||| ||||| || |  ||||| || | |||||||| |||||||||||||| ||||||||||||||||||||||||||    
T  31159345 agaccatttacaatggttgaaaagtttcaacaaccctcaacatctactttttcaattcccaacactccacatcattttctctctct 31159430  T

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Target: chr1; HSP #15
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 121 - 209
Target Start/End: Complemental strand, 37691404 - 37691316
Alignment:
Q  121 tcttagaccatttacagtggttaaatatattcaataatcttcaacatccactttttcaatt-ccaacactccacatcattttctctctct 209  Q
    ||||||| |||||||| |||  |||||||||||| |||| ||| ||| ||||||||||||| |||||||||||||| |||||||||||||    
T  37691404 tcttagatcatttacaatggc-aaatatattcaacaatcctcatcattcactttttcaattcccaacactccacattattttctctctct 37691316  T

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Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 125 - 209
Target Start/End: Original strand, 48404288 - 48404373
Alignment:
Q  125 agaccatttacagtggttaaatatattcaataatcttcaacatccactttttcaattcc-aacactccacatcattttctctctct 209  Q
    |||||||||||| |||| | | |||||||| || | |||||| | |||||||||||||| ||||||||||||||||||||||||||    
T  48404288 agaccatttacaatggtcacaaatattcaacaaccctcaacaccaactttttcaattcccaacactccacatcattttctctctct 48404373  T

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Target: chr1; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 123 - 206
Target Start/End: Original strand, 37822525 - 37822609
Alignment:
Q  123 ttagaccatttacagtggttaaatatattcaataatcttcaacatccactttttcaattc-caacactccacatcattttctctc 206  Q
    |||||||||||||| ||||| || || |||||||| | | ||||  |||||||||||||| ||||||||||||||||||||||||    
T  37822525 ttagaccatttacaatggttgaaaattttcaataaccctgaacactcactttttcaattctcaacactccacatcattttctctc 37822609  T

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Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 159 - 209
Target Start/End: Original strand, 29523695 - 29523746
Alignment:
Q  159 cttcaacatccactttttcaattcc-aacactccacatcattttctctctct 209  Q
    |||||||| |||||||||||||||| ||||||||||||||||||||||||||    
T  29523695 cttcaacacccactttttcaattcccaacactccacatcattttctctctct 29523746  T

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Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 150 - 208
Target Start/End: Complemental strand, 35847207 - 35847148
Alignment:
Q  150 ttcaataatcttcaacatccactttttcaatt-ccaacactccacatcattttctctctc 208  Q
    |||||||  |||||||||||||||||| |||| |||||||||||||||||||||||||||    
T  35847207 ttcaatatccttcaacatccacttttttaatttccaacactccacatcattttctctctc 35847148  T

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Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 160 - 209
Target Start/End: Original strand, 31468126 - 31468176
Alignment:
Q  160 ttcaacatccactttttcaattcc-aacactccacatcattttctctctct 209  Q
    ||||||| |||||||||||||||| ||||||||||||||||||||||||||    
T  31468126 ttcaacacccactttttcaattcccaacactccacatcattttctctctct 31468176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 160 - 209
Target Start/End: Original strand, 41542323 - 41542373
Alignment:
Q  160 ttcaacatccactttttcaatt-ccaacactccacatcattttctctctct 209  Q
    |||||||||||||||||||||| ||||||||||||||||| ||||||||||    
T  41542323 ttcaacatccactttttcaattcccaacactccacatcatattctctctct 41542373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 160 - 209
Target Start/End: Original strand, 45239131 - 45239181
Alignment:
Q  160 ttcaacatccactttttcaattcc-aacactccacatcattttctctctct 209  Q
    ||||||| |||||||||||||||| ||||||||||||||||||||||||||    
T  45239131 ttcaacacccactttttcaattcccaacactccacatcattttctctctct 45239181  T

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Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 160 - 209
Target Start/End: Complemental strand, 3755104 - 3755054
Alignment:
Q  160 ttcaacatccactttttcaattc-caacactccacatcattttctctctct 209  Q
    |||| |||||||||||||||||| |||||||| ||||||||||||||||||    
T  3755104 ttcagcatccactttttcaattctcaacactctacatcattttctctctct 3755054  T

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Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 160 - 209
Target Start/End: Original strand, 17783370 - 17783420
Alignment:
Q  160 ttcaacatccactttttcaattcc-aacactccacatcattttctctctct 209  Q
    ||||||||||||||||| |||||| |||| |||||||||||||||||||||    
T  17783370 ttcaacatccacttttttaattcccaacattccacatcattttctctctct 17783420  T

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Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 160 - 209
Target Start/End: Complemental strand, 27630536 - 27630486
Alignment:
Q  160 ttcaacatccactttttcaattcc-aacactccacatcattttctctctct 209  Q
    ||||||| |||||||||||||||| |||||||||||||||||| |||||||    
T  27630536 ttcaacacccactttttcaattcccaacactccacatcattttatctctct 27630486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 160 - 209
Target Start/End: Complemental strand, 37420420 - 37420370
Alignment:
Q  160 ttcaacatccactttttcaattcc-aacactccacatcattttctctctct 209  Q
    ||||||| |||||||||||||||| |||||||||||||||||| |||||||    
T  37420420 ttcaacacccactttttcaattcccaacactccacatcattttatctctct 37420370  T

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Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 168 - 209
Target Start/End: Complemental strand, 44451338 - 44451296
Alignment:
Q  168 ccactttttcaattcc-aacactccacatcattttctctctct 209  Q
    |||||||||||||||| ||||||||||||||||||||||||||    
T  44451338 ccactttttcaattcccaacactccacatcattttctctctct 44451296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 168 - 209
Target Start/End: Original strand, 44651074 - 44651116
Alignment:
Q  168 ccactttttcaattcc-aacactccacatcattttctctctct 209  Q
    |||||||||||||||| ||||||||||||||||||||||||||    
T  44651074 ccactttttcaattcccaacactccacatcattttctctctct 44651116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 129 - 209
Target Start/End: Original strand, 36230319 - 36230400
Alignment:
Q  129 catttacagtggttaaatatattcaataatcttcaacatccactttttcaatt-ccaacactccacatcattttctctctct 209  Q
    |||||||| |||||||| | |||||| || | |||||| | |||||||||||| |||||||| ||||||||||| |||||||    
T  36230319 catttacaatggttaaacacattcaacaaccctcaacaccaactttttcaattcccaacacttcacatcattttatctctct 36230400  T

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Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 209
Target Start/End: Complemental strand, 643890 - 643848
Alignment:
Q  168 ccactttttcaattcc-aacactccacatcattttctctctct 209  Q
    |||||||||||||||| |||||||||| |||||||||||||||    
T  643890 ccactttttcaattcccaacactccacgtcattttctctctct 643848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 209
Target Start/End: Complemental strand, 17681358 - 17681288
Alignment:
Q  141 ttaaatatattcaataatcttcaacatccactttttcaatt-ccaacactc-cacatcattttctctctct 209  Q
    ||||| |||||||| || |||||||||||| ||||||||||  ||||||||  ||||||||||||||||||    
T  17681358 ttaaacatattcaacaaccttcaacatccagtttttcaattatcaacactcagacatcattttctctctct 17681288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 169 - 209
Target Start/End: Complemental strand, 20584918 - 20584877
Alignment:
Q  169 cactttttcaattcc-aacactccacatcattttctctctct 209  Q
    ||||||||||||||| ||||||||||||||||||||| ||||    
T  20584918 cactttttcaattcccaacactccacatcattttctcactct 20584877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 209
Target Start/End: Complemental strand, 37646626 - 37646586
Alignment:
Q  170 actttttcaattcc-aacactccacatcattttctctctct 209  Q
    ||||||| |||||| ||||||||||||||||||||||||||    
T  37646626 acttttttaattcccaacactccacatcattttctctctct 37646586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0362 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0362
Description:

Target: scaffold0362; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 125 - 205
Target Start/End: Complemental strand, 5434 - 5353
Alignment:
Q  125 agaccatttacagtggttaaatatattcaataatcttcaacatccactttttcaatt-ccaacactccacatcattttctct 205  Q
    |||||||||||| |||  ||||||||||||||  | |||||| |||||||||||||| ||||||||||||||||||||||||    
T  5434 agaccatttacaatggcaaaatatattcaatacccctcaacacccactttttcaattcccaacactccacatcattttctct 5353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 161 - 209
Target Start/End: Complemental strand, 57818 - 57769
Alignment:
Q  161 tcaacatccactttttcaattcc-aacactccacatcattttctctctct 209  Q
    |||||| |||||||||||||||| ||||||||||||||||||||||||||    
T  57818 tcaacacccactttttcaattcccaacactccacatcattttctctctct 57769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 160 - 207
Target Start/End: Original strand, 124011 - 124059
Alignment:
Q  160 ttcaacatccactttttcaatt-ccaacactccacatcattttctctct 207  Q
    |||||||||||||||||||||| |||||||||||||||||||| |||||    
T  124011 ttcaacatccactttttcaatttccaacactccacatcattttttctct 124059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 35; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 160 - 209
Target Start/End: Complemental strand, 30614 - 30564
Alignment:
Q  160 ttcaacatccactttttcaattc-caacactccacatcattttctctctct 209  Q
    ||||||||||||||||||||||| |||||||||| || |||||||||||||    
T  30614 ttcaacatccactttttcaattctcaacactccatataattttctctctct 30564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 32; Significance: 0.000000004; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 170 - 208
Target Start/End: Complemental strand, 66138 - 66099
Alignment:
Q  170 actttttcaattc-caacactccacatcattttctctctc 208  Q
    ||||||||||||| ||||||||||||||||||||||||||    
T  66138 actttttcaattctcaacactccacatcattttctctctc 66099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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