View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11923_high_24 (Length: 247)

Name: NF11923_high_24
Description: NF11923
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11923_high_24
NF11923_high_24
[»] chr2 (17 HSPs)
chr2 (1-236)||(15171001-15171236)
chr2 (67-107)||(9477859-9477899)
chr2 (2-55)||(9478231-9478284)
chr2 (5-57)||(5045245-5045297)
chr2 (38-86)||(43808477-43808525)
chr2 (4-55)||(10143104-10143155)
chr2 (67-106)||(29316925-29316964)
chr2 (4-55)||(38239638-38239689)
chr2 (4-46)||(40837515-40837557)
chr2 (5-106)||(4550658-4550759)
chr2 (4-41)||(6988061-6988098)
chr2 (4-100)||(29503170-29503264)
chr2 (15-55)||(10150687-10150727)
chr2 (7-55)||(13864582-13864630)
chr2 (75-107)||(16785428-16785460)
chr2 (68-104)||(32098462-32098498)
chr2 (7-55)||(43431534-43431582)
[»] scaffold0024 (1 HSPs)
scaffold0024 (4-106)||(27457-27559)
[»] chr6 (17 HSPs)
chr6 (4-106)||(32975859-32975961)
chr6 (15-107)||(31461558-31461650)
chr6 (15-106)||(33068659-33068750)
chr6 (8-103)||(2206474-2206569)
chr6 (4-55)||(24836286-24836337)
chr6 (25-102)||(4003708-4003785)
chr6 (6-49)||(34544539-34544582)
chr6 (68-106)||(32408827-32408865)
chr6 (67-105)||(33818102-33818140)
chr6 (67-104)||(4247234-4247271)
chr6 (15-52)||(5554863-5554900)
chr6 (69-106)||(7480265-7480302)
chr6 (5-54)||(29940729-29940778)
chr6 (66-106)||(3155057-3155097)
chr6 (67-103)||(7268049-7268085)
chr6 (66-102)||(9833246-9833282)
chr6 (15-55)||(33116537-33116577)
[»] chr1 (18 HSPs)
chr1 (29-106)||(30237857-30237935)
chr1 (4-54)||(15360827-15360877)
chr1 (5-86)||(4200130-4200211)
chr1 (69-106)||(49560711-49560748)
chr1 (15-98)||(46504315-46504397)
chr1 (4-51)||(49517006-49517053)
chr1 (69-107)||(29666462-29666500)
chr1 (68-106)||(49365939-49365977)
chr1 (1-34)||(1879111-1879144)
chr1 (4-49)||(4338587-4338632)
chr1 (66-107)||(16322722-16322763)
chr1 (7-48)||(42169632-42169673)
chr1 (26-55)||(52190070-52190099)
chr1 (15-55)||(27140417-27140457)
chr1 (4-48)||(29007803-29007847)
chr1 (64-108)||(29415856-29415900)
chr1 (4-48)||(36641814-36641858)
chr1 (15-55)||(37593767-37593807)
[»] chr5 (16 HSPs)
chr5 (5-106)||(20982223-20982324)
chr5 (10-105)||(26516180-26516275)
chr5 (4-55)||(35135749-35135800)
chr5 (4-107)||(39257473-39257576)
chr5 (4-55)||(17756816-17756867)
chr5 (8-55)||(40048371-40048418)
chr5 (4-54)||(7096214-7096264)
chr5 (38-108)||(33961582-33961652)
chr5 (8-106)||(34975259-34975357)
chr5 (2-55)||(912734-912787)
chr5 (4-56)||(21782656-21782708)
chr5 (17-53)||(27153457-27153493)
chr5 (4-48)||(29117017-29117061)
chr5 (4-56)||(31208404-31208456)
chr5 (15-55)||(38033900-38033940)
chr5 (15-47)||(40097501-40097533)
[»] chr8 (14 HSPs)
chr8 (8-107)||(4558678-4558777)
chr8 (4-111)||(11119086-11119193)
chr8 (1-104)||(29699137-29699240)
chr8 (11-55)||(9928188-9928232)
chr8 (15-106)||(26055966-26056057)
chr8 (4-55)||(40728505-40728556)
chr8 (18-104)||(12972739-12972825)
chr8 (4-106)||(14482083-14482185)
chr8 (73-106)||(7918579-7918612)
chr8 (10-55)||(11188248-11188293)
chr8 (66-107)||(41336794-41336835)
chr8 (4-44)||(26820142-26820182)
chr8 (38-106)||(29592653-29592721)
chr8 (15-55)||(32506989-32507029)
[»] chr7 (13 HSPs)
chr7 (15-102)||(28844371-28844458)
chr7 (68-111)||(753355-753398)
chr7 (38-108)||(504111-504181)
chr7 (4-106)||(2223030-2223131)
chr7 (15-105)||(22388002-22388092)
chr7 (4-106)||(31341075-31341177)
chr7 (7-55)||(46223162-46223210)
chr7 (8-55)||(2894749-2894796)
chr7 (4-55)||(28165023-28165074)
chr7 (4-54)||(35808991-35809041)
chr7 (4-100)||(5938971-5939067)
chr7 (74-106)||(28691971-28692003)
chr7 (4-48)||(35536046-35536090)
[»] chr4 (7 HSPs)
chr4 (6-105)||(8422926-8423025)
chr4 (7-111)||(24929369-24929473)
chr4 (4-56)||(51044546-51044598)
chr4 (15-102)||(40709478-40709565)
chr4 (4-99)||(55599054-55599149)
chr4 (12-104)||(21043308-21043401)
chr4 (4-48)||(19422357-19422401)
[»] scaffold0590 (1 HSPs)
scaffold0590 (4-102)||(1161-1259)
[»] scaffold0275 (1 HSPs)
scaffold0275 (4-102)||(2716-2814)
[»] chr3 (11 HSPs)
chr3 (4-56)||(24605103-24605155)
chr3 (40-106)||(2201005-2201071)
chr3 (66-107)||(24235817-24235858)
chr3 (66-106)||(37308214-37308254)
chr3 (15-107)||(43116526-43116618)
chr3 (15-106)||(27294237-27294328)
chr3 (4-102)||(33965578-33965677)
chr3 (4-57)||(3182449-3182502)
chr3 (4-48)||(8007782-8007826)
chr3 (4-56)||(20192693-20192745)
chr3 (4-48)||(48364966-48365010)


Alignment Details
Target: chr2 (Bit Score: 224; Significance: 1e-123; HSPs: 17)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 1 - 236
Target Start/End: Complemental strand, 15171236 - 15171001
Alignment:
Q  1 cattttgactttaatttatcttctgttatagaaaaaacttatacataaacacttaaaaaatacgagcttatgctataaacacttaactaagttgtttatc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||| ||||||    
T  15171236 cattttgactttaatttatcttctgttatagaaaaaacttatacataaacacttataaaatacgagcttatgctataaacacttaattaagttatttatc 15171137  T
Q  101 caaacaaaaccgaatataagaaaaacaaaccatatctttaaaaattaccttcatagaccttctttccttgacaaaagtaggctcaaccttatctttcaag 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15171136 caaacaaaaccgaatataagaaaaacaaaccatatctttaaaaattaccttcatagaccttctttccttgacaaaagtaggctcaaccttatctttcaag 15171037  T
Q  201 taatcaatcttctcattaaagtaatactcaggtgcc 236  Q
    ||||||||||||||||||||||||||||||||||||    
T  15171036 taatcaatcttctcattaaagtaatactcaggtgcc 15171001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 67 - 107
Target Start/End: Complemental strand, 9477899 - 9477859
Alignment:
Q  67 cttatgctataaacacttaactaagttgtttatccaaacaa 107  Q
    |||||||||||||||||||| ||||||||||||||||||||    
T  9477899 cttatgctataaacacttaattaagttgtttatccaaacaa 9477859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 55
Target Start/End: Complemental strand, 9478284 - 9478231
Alignment:
Q  2 attttgactttaatttatcttctgttatagaaaaaacttatacataaacactta 55  Q
    ||||||| |||| ||||||| |||||||||||| | ||||||||||||||||||    
T  9478284 attttgagtttattttatctactgttatagaaatagcttatacataaacactta 9478231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 57
Target Start/End: Original strand, 5045245 - 5045297
Alignment:
Q  5 ttgactttaatttatcttctgttatagaaaaaacttatacataaacacttaaa 57  Q
    ||||||||| |||||||| ||||||| ||| | ||||||||||||||||||||    
T  5045245 ttgactttattttatcttttgttataaaaatagcttatacataaacacttaaa 5045297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 38 - 86
Target Start/End: Complemental strand, 43808525 - 43808477
Alignment:
Q  38 cttatacataaacacttaaaaaatacgagcttatgctataaacacttaa 86  Q
    |||||||||||||||||| |  ||||| |||||||||||||||||||||    
T  43808525 cttatacataaacacttatatgatacgcgcttatgctataaacacttaa 43808477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 55
Target Start/End: Complemental strand, 10143155 - 10143104
Alignment:
Q  4 tttgactttaatttatcttctgttatagaaaaaacttatacataaacactta 55  Q
    |||||||| | |||||||| ||||||||||| ||||||||||||| ||||||    
T  10143155 tttgacttaattttatcttttgttatagaaataacttatacataagcactta 10143104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 67 - 106
Target Start/End: Original strand, 29316925 - 29316964
Alignment:
Q  67 cttatgctataaacacttaactaagttgtttatccaaaca 106  Q
    |||||||| ||||||||||| |||||||||||||||||||    
T  29316925 cttatgctgtaaacacttaattaagttgtttatccaaaca 29316964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 55
Target Start/End: Original strand, 38239638 - 38239689
Alignment:
Q  4 tttgactttaatttatcttctgttatagaaaaaacttatacataaacactta 55  Q
    |||||||| | |||||||| ||||||||||| | ||||||||||||||||||    
T  38239638 tttgacttgattttatcttttgttatagaaatagcttatacataaacactta 38239689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 46
Target Start/End: Original strand, 40837515 - 40837557
Alignment:
Q  4 tttgactttaatttatcttctgttatagaaaaaacttatacat 46  Q
    ||||||||||||||||||| ||||||||||| | |||||||||    
T  40837515 tttgactttaatttatcttttgttatagaaatagcttatacat 40837557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 106
Target Start/End: Complemental strand, 4550759 - 4550658
Alignment:
Q  5 ttgactttaatttatcttctgttatagaaaaaacttatacataaacacttaaaaaatacgagcttatgctataaacacttaactaagttgtttatccaaa 104  Q
    ||||| ||| |||||||| | |||| |||| ||||||||||||| ||||||    ||| ||| |||||||||||    |||| |||||||||||||||||    
T  4550759 ttgacgttattttatcttttattatggaaacaacttatacataagcacttatgtgataagagattatgctataagttgttaattaagttgtttatccaaa 4550660  T
Q  105 ca 106  Q
    ||    
T  4550659 ca 4550658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 6988098 - 6988061
Alignment:
Q  4 tttgactttaatttatcttctgttatagaaaaaactta 41  Q
    |||||||||| |||||||| ||||||||||||||||||    
T  6988098 tttgactttattttatcttttgttatagaaaaaactta 6988061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 100
Target Start/End: Original strand, 29503170 - 29503264
Alignment:
Q  4 tttgactttaatttatcttctgttatagaaaaaacttatacataaacacttaaaaaatacgagcttatgctataaacacttaactaagttgtttatc 100  Q
    |||||||||| ||||||||  |||||||||| | | |||||||||||||||  | |||| | |||||||||| |||  ||||| |||||| ||||||    
T  29503170 tttgactttattttatctt--gttatagaaatatcatatacataaacacttctataataagtgcttatgctacaaatgcttaattaagttttttatc 29503264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 55
Target Start/End: Complemental strand, 10150727 - 10150687
Alignment:
Q  15 tttatcttctgttatagaaaaaacttatacataaacactta 55  Q
    |||||||| | ||||||||| ||||||||||||||||||||    
T  10150727 tttatcttttattatagaaataacttatacataaacactta 10150687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 55
Target Start/End: Complemental strand, 13864630 - 13864582
Alignment:
Q  7 gactttaatttatcttctgttatagaaaaaacttatacataaacactta 55  Q
    ||||||| |||| ||| ||||||||||| | ||||||||||||||||||    
T  13864630 gactttattttaccttttgttatagaaatagcttatacataaacactta 13864582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 75 - 107
Target Start/End: Original strand, 16785428 - 16785460
Alignment:
Q  75 ataaacacttaactaagttgtttatccaaacaa 107  Q
    |||| ||||||||||||||||||||||||||||    
T  16785428 ataagcacttaactaagttgtttatccaaacaa 16785460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 68 - 104
Target Start/End: Original strand, 32098462 - 32098498
Alignment:
Q  68 ttatgctataaacacttaactaagttgtttatccaaa 104  Q
    ||||||||||| ||||||| |||||||||||||||||    
T  32098462 ttatgctataagcacttaagtaagttgtttatccaaa 32098498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 55
Target Start/End: Original strand, 43431534 - 43431582
Alignment:
Q  7 gactttaatttatcttctgttatagaaaaaacttatacataaacactta 55  Q
    ||||||| |||||||| |||||| |||| ||||||||||| ||||||||    
T  43431534 gactttactttatcttttgttattgaaataacttatacattaacactta 43431582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 4 - 106
Target Start/End: Complemental strand, 27559 - 27457
Alignment:
Q  4 tttgactttaatttatcttctgttatagaaaaaacttatacataaacacttaaaaaatacgagcttatgctataaacacttaactaagttgtttatccaa 103  Q
    |||||||||| |||||||||||||||||||| ||||||||||||| |||||| |  ||| ||||||||||||||| |  |||  ||||||||||||||||    
T  27559 tttgactttattttatcttctgttatagaaataacttatacataagcacttacatgataagagcttatgctataagcgtttatttaagttgtttatccaa 27460  T
Q  104 aca 106  Q
    |||    
T  27459 aca 27457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 47; Significance: 6e-18; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 4 - 106
Target Start/End: Complemental strand, 32975961 - 32975859
Alignment:
Q  4 tttgactttaatttatcttctgttatagaaaaaacttatacataaacacttaaaaaatacgagcttatgctataaacacttaactaagttgtttatccaa 103  Q
    |||||||||| ||||| || ||||| ||||| |||||||||||||||||||| |  | | | ||||||||||||||| ||||| ||||||||||||| ||    
T  32975961 tttgactttattttatattttgttacagaaataacttatacataaacacttatatgagaagcgcttatgctataaacgcttaattaagttgtttatctaa 32975862  T
Q  104 aca 106  Q
    |||    
T  32975861 aca 32975859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 15 - 107
Target Start/End: Complemental strand, 31461650 - 31461558
Alignment:
Q  15 tttatcttctgttatagaaaaaacttatacataaacacttaaaaaatacgagcttatgctataaacacttaactaagttgtttatccaaacaa 107  Q
    |||||||| ||||||||||| | ||||||||||| |||||| | |||| | ||||||  ||||| ||||||| ||||||||||| ||||||||    
T  31461650 tttatcttttgttatagaaatagcttatacataagcacttatacaataagtgcttataatataagcacttaattaagttgtttaaccaaacaa 31461558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 15 - 106
Target Start/End: Original strand, 33068659 - 33068750
Alignment:
Q  15 tttatcttctgttatagaaaaaacttatacataaacacttaaaaaatacgagcttatgctataaacacttaactaagttgtttatccaaaca 106  Q
    |||||||| ||||||||||| ||||||||||||| || |||    ||| | ||||||||||||||||||||| |||| |||| |||||||||    
T  33068659 tttatcttttgttatagaaataacttatacataagcatttatttgataagcgcttatgctataaacacttaattaagctgttcatccaaaca 33068750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 8 - 103
Target Start/End: Complemental strand, 2206569 - 2206474
Alignment:
Q  8 actttaatttatcttctgttatagaaaaaacttatacataaacacttaaaaaatacgagcttatgctataaacacttaactaagttgtttatccaa 103  Q
    |||||| |||||||| ||||||| ||| |||||||||| |||  |||| |  ||| ||||||||||||||| ||||||| ||||  ||||||||||    
T  2206569 actttattttatcttttgttataaaaataacttatacagaaatgcttatacgataagagcttatgctataagcacttaattaagaagtttatccaa 2206474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 55
Target Start/End: Original strand, 24836286 - 24836337
Alignment:
Q  4 tttgactttaatttatcttctgttatagaaaaaacttatacataaacactta 55  Q
    |||||||||| |||||||| ||||||||||| |||||||||||||| |||||    
T  24836286 tttgactttattttatcttttgttatagaaataacttatacataaatactta 24836337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 102
Target Start/End: Original strand, 4003708 - 4003785
Alignment:
Q  25 gttatagaaaaaacttatacataaacacttaaaaaatacgagcttatgctataaacacttaactaagttgtttatcca 102  Q
    |||||||||| | ||||||||||| |||||| |  |||  | |||||||||||| ||||||| |||||||||||||||    
T  4003708 gttatagaaatagcttatacataagcacttatagcataaaaacttatgctataagcacttaattaagttgtttatcca 4003785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 6 - 49
Target Start/End: Original strand, 34544539 - 34544582
Alignment:
Q  6 tgactttaatttatcttctgttatagaaaaaacttatacataaa 49  Q
    |||||||| |||||||| ||||||||||| ||||||||||||||    
T  34544539 tgactttagtttatcttttgttatagaaataacttatacataaa 34544582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 68 - 106
Target Start/End: Complemental strand, 32408865 - 32408827
Alignment:
Q  68 ttatgctataaacacttaactaagttgtttatccaaaca 106  Q
    ||||||||||||||||||| ||||||||||||| |||||    
T  32408865 ttatgctataaacacttaattaagttgtttatcgaaaca 32408827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 67 - 105
Target Start/End: Original strand, 33818102 - 33818140
Alignment:
Q  67 cttatgctataaacacttaactaagttgtttatccaaac 105  Q
    |||||||||||||||||||| |||||||| |||||||||    
T  33818102 cttatgctataaacacttaattaagttgtatatccaaac 33818140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 67 - 104
Target Start/End: Original strand, 4247234 - 4247271
Alignment:
Q  67 cttatgctataaacacttaactaagttgtttatccaaa 104  Q
    |||||||||||| ||||||| |||||||||||||||||    
T  4247234 cttatgctataagcacttaattaagttgtttatccaaa 4247271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 15 - 52
Target Start/End: Original strand, 5554863 - 5554900
Alignment:
Q  15 tttatcttctgttatagaaaaaacttatacataaacac 52  Q
    |||||||| ||||||||||| |||||||||||||||||    
T  5554863 tttatcttttgttatagaaataacttatacataaacac 5554900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 69 - 106
Target Start/End: Original strand, 7480265 - 7480302
Alignment:
Q  69 tatgctataaacacttaactaagttgtttatccaaaca 106  Q
    |||| ||||| |||||||||||||||||||||||||||    
T  7480265 tatgttataagcacttaactaagttgtttatccaaaca 7480302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 54
Target Start/End: Complemental strand, 29940778 - 29940729
Alignment:
Q  5 ttgactttaatttatcttctgttatagaaaaaacttatacataaacactt 54  Q
    ||||||||| |||||||| ||||||||||||| ||||||| ||| |||||    
T  29940778 ttgactttattttatcttttgttatagaaaaagcttatacttaagcactt 29940729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 106
Target Start/End: Complemental strand, 3155097 - 3155057
Alignment:
Q  66 gcttatgctataaacacttaactaagttgtttatccaaaca 106  Q
    ||||||||||||| | ||||| |||||||||||||||||||    
T  3155097 gcttatgctataagcgcttaaataagttgtttatccaaaca 3155057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 67 - 103
Target Start/End: Original strand, 7268049 - 7268085
Alignment:
Q  67 cttatgctataaacacttaactaagttgtttatccaa 103  Q
    ||||| |||||||||||||| ||||||||||||||||    
T  7268049 cttatactataaacacttaattaagttgtttatccaa 7268085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 102
Target Start/End: Original strand, 9833246 - 9833282
Alignment:
Q  66 gcttatgctataaacacttaactaagttgtttatcca 102  Q
    ||||||| ||||||||||||| |||||||||||||||    
T  9833246 gcttatgttataaacacttaattaagttgtttatcca 9833282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 55
Target Start/End: Complemental strand, 33116577 - 33116537
Alignment:
Q  15 tttatcttctgttatagaaaaaacttatacataaacactta 55  Q
    |||||||| ||||| ||||| ||||||||||||||||||||    
T  33116577 tttatcttttgttaaagaaataacttatacataaacactta 33116537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 18)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 29 - 106
Target Start/End: Original strand, 30237857 - 30237935
Alignment:
Q  29 tagaaaaaacttatacataaa-cacttaaaaaatacgagcttatgctataaacacttaactaagttgtttatccaaaca 106  Q
    |||||| |||||||||||||| |||||| | |||| | |||||||||||| |||||||| |||||||||||||||||||    
T  30237857 tagaaataacttatacataaaacacttatataataagtgcttatgctatagacacttaattaagttgtttatccaaaca 30237935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 4 - 54
Target Start/End: Complemental strand, 15360877 - 15360827
Alignment:
Q  4 tttgactttaatttatcttctgttatagaaaaaacttatacataaacactt 54  Q
    |||||||||| |||||||| ||||||||||| |||| ||||||||||||||    
T  15360877 tttgactttattttatcttttgttatagaaataactaatacataaacactt 15360827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 86
Target Start/End: Complemental strand, 4200211 - 4200130
Alignment:
Q  5 ttgactttaatttatcttctgttatagaaaaaacttatacataaacacttaaaaaatacgagcttatgctataaacacttaa 86  Q
    ||||||||| |||||||| ||||||| ||| |||||||| ||||||||||| |  ||| | ||||||||||||  |||||||    
T  4200211 ttgactttattttatcttttgttataaaaataacttatatataaacacttagatgataagtgcttatgctatacgcacttaa 4200130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 69 - 106
Target Start/End: Original strand, 49560711 - 49560748
Alignment:
Q  69 tatgctataaacacttaactaagttgtttatccaaaca 106  Q
    |||||||||||||||||| |||||||||||||||||||    
T  49560711 tatgctataaacacttaagtaagttgtttatccaaaca 49560748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 98
Target Start/End: Original strand, 46504315 - 46504397
Alignment:
Q  15 tttatcttctgttatagaaaaaacttatacataaacacttaaaaaatacgagcttatgctataaacacttaactaagttgttta 98  Q
    |||||||| ||||||| ||| |  ||||| | ||||||||| |  ||| ||||||||||||||||||||||| |||||||||||    
T  46504315 tttatcttttgttataaaaatagtttatagacaaacacttatatgataagagcttatgctataaacacttaa-taagttgttta 46504397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 51
Target Start/End: Complemental strand, 49517053 - 49517006
Alignment:
Q  4 tttgactttaatttatcttctgttatagaaaaaacttatacataaaca 51  Q
    |||||||||| |||||||| ||||||||||| |||||||||| |||||    
T  49517053 tttgactttattttatcttttgttatagaaataacttatacacaaaca 49517006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 69 - 107
Target Start/End: Original strand, 29666462 - 29666500
Alignment:
Q  69 tatgctataaacacttaactaagttgtttatccaaacaa 107  Q
    |||||||||| ||||||| ||||||||||||||||||||    
T  29666462 tatgctataagcacttaagtaagttgtttatccaaacaa 29666500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 68 - 106
Target Start/End: Original strand, 49365939 - 49365977
Alignment:
Q  68 ttatgctataaacacttaactaagttgtttatccaaaca 106  Q
    ||||||||||| | |||||||||||||||||||||||||    
T  49365939 ttatgctataagcgcttaactaagttgtttatccaaaca 49365977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 1879111 - 1879144
Alignment:
Q  1 cattttgactttaatttatcttctgttatagaaa 34  Q
    ||||||||||||| ||||||||||||||||||||    
T  1879111 cattttgactttattttatcttctgttatagaaa 1879144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 49
Target Start/End: Complemental strand, 4338632 - 4338587
Alignment:
Q  4 tttgactttaatttatcttctgttatagaaaaaacttatacataaa 49  Q
    |||||||||| ||||||||||||| |||| | ||||||||||||||    
T  4338632 tttgactttattttatcttctgttctagacataacttatacataaa 4338587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 66 - 107
Target Start/End: Complemental strand, 16322763 - 16322722
Alignment:
Q  66 gcttatgctataaacacttaactaagttgtttatccaaacaa 107  Q
    |||| |||||||| ||||||| ||||||||||||||||||||    
T  16322763 gcttgtgctataagcacttaattaagttgtttatccaaacaa 16322722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 48
Target Start/End: Original strand, 42169632 - 42169673
Alignment:
Q  7 gactttaatttatcttctgttatagaaaaaacttatacataa 48  Q
    ||||||| |||||||||||||||||||| |||||||| ||||    
T  42169632 gactttattttatcttctgttatagaaataacttatagataa 42169673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 26 - 55
Target Start/End: Complemental strand, 52190099 - 52190070
Alignment:
Q  26 ttatagaaaaaacttatacataaacactta 55  Q
    ||||||||||||||||||||||||||||||    
T  52190099 ttatagaaaaaacttatacataaacactta 52190070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 55
Target Start/End: Complemental strand, 27140457 - 27140417
Alignment:
Q  15 tttatcttctgttatagaaaaaacttatacataaacactta 55  Q
    |||||||| ||||||||||| |||||| |||||||||||||    
T  27140457 tttatcttttgttatagaaataacttacacataaacactta 27140417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 48
Target Start/End: Original strand, 29007803 - 29007847
Alignment:
Q  4 tttgactttaatttatcttctgttatagaaaaaacttatacataa 48  Q
    |||||||||||||| |||| ||||||||||| |||||| ||||||    
T  29007803 tttgactttaatttttcttttgttatagaaataacttagacataa 29007847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 108
Target Start/End: Original strand, 29415856 - 29415900
Alignment:
Q  64 gagcttatgctataaacacttaactaagttgtttatccaaacaaa 108  Q
    ||||||||||||||| | ||||| || ||||||||||||||||||    
T  29415856 gagcttatgctataagcgcttaattatgttgtttatccaaacaaa 29415900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 48
Target Start/End: Complemental strand, 36641858 - 36641814
Alignment:
Q  4 tttgactttaatttatcttctgttatagaaaaaacttatacataa 48  Q
    |||||||||| |||||||| ||||||||||| |||||||| ||||    
T  36641858 tttgactttattttatcttttgttatagaaataacttatatataa 36641814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 55
Target Start/End: Original strand, 37593767 - 37593807
Alignment:
Q  15 tttatcttctgttatagaaaaaacttatacataaacactta 55  Q
    |||||||| ||||||||||| | ||||||||||||||||||    
T  37593767 tttatcttgtgttatagaaataccttatacataaacactta 37593807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 16)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 5 - 106
Target Start/End: Original strand, 20982223 - 20982324
Alignment:
Q  5 ttgactttaatttatcttctgttatagaaaaaacttatacataaacacttaaaaaatacgagcttatgctataaacacttaactaagttgtttatccaaa 104  Q
    ||||||||| |||||| | ||||||||||| | ||||||||||| |||||| |  ||| |  |||||||||||| |||||||  ||||||||||||||||    
T  20982223 ttgactttattttatcctttgttatagaaatagcttatacataagcacttatatgataagcacttatgctataagcacttaatgaagttgtttatccaaa 20982322  T
Q  105 ca 106  Q
    ||    
T  20982323 ca 20982324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 10 - 105
Target Start/End: Complemental strand, 26516275 - 26516180
Alignment:
Q  10 tttaatttatcttctgttatagaaaaaacttatacataaacacttaaaaaatacgagcttatgctataaacacttaactaagttgtttatccaaac 105  Q
    |||| |||||||| |||| |||||| | ||||||||||| |||||| |  ||| | ||||||||||||| | ||||| ||||||||||||||||||    
T  26516275 tttattttatcttttgttttagaaatagcttatacataagcacttatatgataagcgcttatgctataagcgcttaattaagttgtttatccaaac 26516180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 55
Target Start/End: Original strand, 35135749 - 35135800
Alignment:
Q  4 tttgactttaatttatcttctgttatagaaaaaacttatacataaacactta 55  Q
    |||||||||| |||||||| ||||||||||| | ||||||||||||||||||    
T  35135749 tttgactttattttatcttttgttatagaaatatcttatacataaacactta 35135800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 107
Target Start/End: Original strand, 39257473 - 39257576
Alignment:
Q  4 tttgactttaatttatcttctgttatagaaaaaacttatacataaacacttaaaaaatacgagcttatgctataaacacttaactaagttgtttatccaa 103  Q
    |||||||||| |||| ||| ||||||||| | | | ||||||||| |||||| |  |||  || ||||||||||| | ||||| ||||||||||||||||    
T  39257473 tttgactttattttaccttttgttatagagatagcatatacataagcacttacatgataatagtttatgctataagcgcttaattaagttgtttatccaa 39257572  T
Q  104 acaa 107  Q
    ||||    
T  39257573 acaa 39257576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 55
Target Start/End: Original strand, 17756816 - 17756867
Alignment:
Q  4 tttgactttaatttatcttctgttatagaaaaaacttatacataaacactta 55  Q
    |||||||||| |||||||||||||| ||||| |||| |||||||| ||||||    
T  17756816 tttgactttattttatcttctgttaaagaaacaactcatacataagcactta 17756867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 55
Target Start/End: Original strand, 40048371 - 40048418
Alignment:
Q  8 actttaatttatcttctgttatagaaaaaacttatacataaacactta 55  Q
    |||||| |||||||| ||||||||||| ||||||||||||| ||||||    
T  40048371 actttattttatcttttgttatagaaacaacttatacataagcactta 40048418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 54
Target Start/End: Original strand, 7096214 - 7096264
Alignment:
Q  4 tttgactttaatttatcttctgttatagaaaaaacttatacataaacactt 54  Q
    |||||||||| |||||||| ||||||||||| | ||||||||||| |||||    
T  7096214 tttgactttattttatcttttgttatagaaatagcttatacataagcactt 7096264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 108
Target Start/End: Complemental strand, 33961652 - 33961582
Alignment:
Q  38 cttatacataaacacttaaaaaatacgagcttatgctataaacacttaactaagttgtttatccaaacaaa 108  Q
    |||||||| ||||||||| |  ||| | |||||| |||||||||||||| ||||| |||| ||||||||||    
T  33961652 cttatacaaaaacacttatatgataagtgcttatactataaacacttaattaagtcgtttctccaaacaaa 33961582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 106
Target Start/End: Complemental strand, 34975357 - 34975259
Alignment:
Q  8 actttaatttatcttctgttatagaaaaaacttatacataaacacttaaaaaatacgagcttatgctataaacacttaactaagttgtttatccaaaca 106  Q
    |||||| || ||||| ||||||||||| |  |||||||||| |||| ||| ||||   |||||||||| |||||||||| |||| || | |||||||||    
T  34975357 actttatttcatcttttgttatagaaatagtttatacataatcactcaaataataactgcttatgctacaaacacttaattaagctgataatccaaaca 34975259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 55
Target Start/End: Original strand, 912734 - 912787
Alignment:
Q  2 attttgactttaatttatcttctgttatagaaaaaacttatacataaacactta 55  Q
    |||||||||||| ||||| || ||||||||||| ||||||| ||||||| ||||    
T  912734 attttgactttattttatattgtgttatagaaataacttattcataaacgctta 912787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 56
Target Start/End: Original strand, 21782656 - 21782708
Alignment:
Q  4 tttgactttaatttatcttctgttatagaaaaaacttatacataaacacttaa 56  Q
    |||||||||| |||| ||| ||||||||||| | |||| ||||||||||||||    
T  21782656 tttgactttattttagcttttgttatagaaatagcttaaacataaacacttaa 21782708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 53
Target Start/End: Original strand, 27153457 - 27153493
Alignment:
Q  17 tatcttctgttatagaaaaaacttatacataaacact 53  Q
    |||||||||| ||||||||||||||||||||| ||||    
T  27153457 tatcttctgtcatagaaaaaacttatacataagcact 27153493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 48
Target Start/End: Original strand, 29117017 - 29117061
Alignment:
Q  4 tttgactttaatttatcttctgttatagaaaaaacttatacataa 48  Q
    |||||||||| |||||||| ||||||||||| ||| |||||||||    
T  29117017 tttgactttattttatcttttgttatagaaataacatatacataa 29117061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 56
Target Start/End: Complemental strand, 31208456 - 31208404
Alignment:
Q  4 tttgactttaatttatcttctgttatagaaaaaacttatacataaacacttaa 56  Q
    |||||| ||||||||| || ||||||||||| ||||||| ||||| |||||||    
T  31208456 tttgacgttaatttatattttgttatagaaataacttatgcataagcacttaa 31208404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 55
Target Start/End: Complemental strand, 38033940 - 38033900
Alignment:
Q  15 tttatcttctgttatagaaaaaacttatacataaacactta 55  Q
    |||||||| ||||||| ||| ||||||||||||||||||||    
T  38033940 tttatcttttgttatataaataacttatacataaacactta 38033900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 47
Target Start/End: Original strand, 40097501 - 40097533
Alignment:
Q  15 tttatcttctgttatagaaaaaacttatacata 47  Q
    |||||||||||||||||||| ||||||||||||    
T  40097501 tttatcttctgttatagaaataacttatacata 40097533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 14)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 8 - 107
Target Start/End: Complemental strand, 4558777 - 4558678
Alignment:
Q  8 actttaatttatcttctgttatagaaaaaacttatacataaacacttaaaaaatacgagcttatgctataaacacttaactaagttgtttatccaaacaa 107  Q
    |||||| |||||||| | ||||||||| | |||||||||||||||||| | ||||   | ||||||||||| | | ||| ||||||||||||||||||||    
T  4558777 actttattttatcttttattatagaaatagcttatacataaacacttacataataaacgtttatgctataagcgcgtaattaagttgtttatccaaacaa 4558678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 4 - 111
Target Start/End: Original strand, 11119086 - 11119193
Alignment:
Q  4 tttgactttaatttatcttctgttatagaaaaaacttatacataaacacttaaaaaatacgagcttatgctataaacacttaactaagttgtttatccaa 103  Q
    |||||||||| |||||||| ||||||||||| | | ||||||||| |  ||| |  ||| |   |||||||||||||||||||  |||||||||||||||    
T  11119086 tttgactttattttatcttttgttatagaaatatcgtatacataagcgattatatgatatgtagttatgctataaacacttaatcaagttgtttatccaa 11119185  T
Q  104 acaaaacc 111  Q
    ||||||||    
T  11119186 acaaaacc 11119193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 29699240 - 29699137
Alignment:
Q  1 cattttgactttaatttatcttctgttatagaaaaaacttatacataaacacttaaaaaatacgagcttatgctataaacacttaactaagttgtttatc 100  Q
    ||||||||||||| |||||||| ||||||||||| ||||| ||||||| || ||| |  |||     ||||||||||| ||||||||||||| |||||||    
T  29699240 cattttgactttattttatcttttgttatagaaataacttgtacataagcatttatatgataaatatttatgctataagcacttaactaagtcgtttatc 29699141  T
Q  101 caaa 104  Q
    ||||    
T  29699140 caaa 29699137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 11 - 55
Target Start/End: Complemental strand, 9928232 - 9928188
Alignment:
Q  11 ttaatttatcttctgttatagaaaaaacttatacataaacactta 55  Q
    |||||||||||| ||||||||||| ||||||||||||||||||||    
T  9928232 ttaatttatcttttgttatagaaataacttatacataaacactta 9928188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 106
Target Start/End: Complemental strand, 26056057 - 26055966
Alignment:
Q  15 tttatcttctgttatagaaaaaacttatacataaacacttaaaaaatacgagcttatgctataaacacttaactaagttgtttatccaaaca 106  Q
    |||||||| |||| |||||  | |||||||||||||||||| || | |  |||||||||||||| | | ||| ||||||||| |||||||||    
T  26056057 tttatcttttgttttagaattagcttatacataaacacttataataaaaaagcttatgctataagcgcgtaattaagttgttgatccaaaca 26055966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 55
Target Start/End: Original strand, 40728505 - 40728556
Alignment:
Q  4 tttgactttaatttatcttctgttatagaaaaaacttatacataaacactta 55  Q
    |||||||||| |||||||| ||||||||||| ||||||| ||| ||||||||    
T  40728505 tttgactttattttatcttttgttatagaaataacttatgcatgaacactta 40728556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 104
Target Start/End: Complemental strand, 12972825 - 12972739
Alignment:
Q  18 atcttctgttatagaaaaaacttatacataaacacttaaaaaatacgagcttatgctataaacacttaactaagttgtttatccaaa 104  Q
    |||||||||||| |||| | ||||||||||| |||||| |  |||   ||||||||||||| | ||||| |||||||||| ||||||    
T  12972825 atcttctgttattgaaatagcttatacataagcacttatatgataaatgcttatgctataagcgcttaattaagttgtttgtccaaa 12972739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 106
Target Start/End: Complemental strand, 14482185 - 14482083
Alignment:
Q  4 tttgactttaatttatcttctgttatagaaaaaacttatacataaacacttaaaaaatacgagcttatgctataaacacttaactaagttgtttatccaa 103  Q
    |||||||||| |||||||| ||||||||||| |  |||||||||| |||||| |  ||| |  || |||||||||  |||||| ||| |||||||| |||    
T  14482185 tttgactttattttatcttttgttatagaaatagtttatacataagcacttatatgataagcactaatgctataagaacttaattaaattgtttattcaa 14482086  T
Q  104 aca 106  Q
    |||    
T  14482085 aca 14482083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 73 - 106
Target Start/End: Original strand, 7918579 - 7918612
Alignment:
Q  73 ctataaacacttaactaagttgtttatccaaaca 106  Q
    |||||| |||||||||||||||||||||||||||    
T  7918579 ctataatcacttaactaagttgtttatccaaaca 7918612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 10 - 55
Target Start/End: Original strand, 11188248 - 11188293
Alignment:
Q  10 tttaatttatcttctgttatagaaaaaacttatacataaacactta 55  Q
    |||| |||||||| ||||||||||| ||||||||||||| ||||||    
T  11188248 tttattttatcttttgttatagaaacaacttatacataagcactta 11188293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 66 - 107
Target Start/End: Original strand, 41336794 - 41336835
Alignment:
Q  66 gcttatgctataaacacttaactaagttgtttatccaaacaa 107  Q
    ||||||||||||| || |||| ||||||||||||||||||||    
T  41336794 gcttatgctataagcaattaattaagttgtttatccaaacaa 41336835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 26820182 - 26820142
Alignment:
Q  4 tttgactttaatttatcttctgttatagaaaaaacttatac 44  Q
    |||||||||| |||||||| ||||||||||| |||||||||    
T  26820182 tttgactttattttatcttttgttatagaaataacttatac 26820142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 106
Target Start/End: Original strand, 29592653 - 29592721
Alignment:
Q  38 cttatacataaacacttaaaaaatacgagcttatgctataaacacttaactaagttgtttatccaaaca 106  Q
    |||||||| || |||||| |  ||| || |||||||||||||  | |||||||||||||||||||||||    
T  29592653 cttatacaaaagcacttatatgataagaacttatgctataaatgcataactaagttgtttatccaaaca 29592721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 55
Target Start/End: Complemental strand, 32507029 - 32506989
Alignment:
Q  15 tttatcttctgttatagaaaaaacttatacataaacactta 55  Q
    |||||||| |||| |||||| ||||||||||||||||||||    
T  32507029 tttatcttttgttgtagaaataacttatacataaacactta 32506989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 13)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 15 - 102
Target Start/End: Complemental strand, 28844458 - 28844371
Alignment:
Q  15 tttatcttctgttatagaaaaaacttatacataaacacttaaaaaatacgagcttatgctataaacacttaactaagttgtttatcca 102  Q
    |||||||| | |||| |||| | ||||||||||| |||||| | |||| | ||||||||||||||||||||| |||||||| ||||||    
T  28844458 tttatctttttttatcgaaatatcttatacataagcacttatacaataagcgcttatgctataaacacttaattaagttgtatatcca 28844371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 68 - 111
Target Start/End: Original strand, 753355 - 753398
Alignment:
Q  68 ttatgctataaacacttaactaagttgtttatccaaacaaaacc 111  Q
    ||||||||||||||||||| ||||||||||||||||||| ||||    
T  753355 ttatgctataaacacttaattaagttgtttatccaaacagaacc 753398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 38 - 108
Target Start/End: Complemental strand, 504181 - 504111
Alignment:
Q  38 cttatacataaacacttaaaaaatacgagcttatgctataaacacttaactaagttgtttatccaaacaaa 108  Q
    ||||||||||||| |||  |||||| ||||||||||||||| ||||||| |||  | ||||||||||||||    
T  504181 cttatacataaacgcttgtaaaataggagcttatgctataagcacttaattaaactatttatccaaacaaa 504111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 4 - 106
Target Start/End: Complemental strand, 2223131 - 2223030
Alignment:
Q  4 tttgactttaatttatcttctgttatagaaaaaacttatacataaacacttaaaaaatacgagcttatgctataaacacttaactaagttgtttatccaa 103  Q
    |||||||||  |||||||| ||||||||||| | |||||||||||||||||| |  ||| ||  ||||||||||||  | ||| ||| ||||||||||||    
T  2223131 tttgacttttctttatcttttgttatagaaatagcttatacataaacacttatacgataaga-tttatgctataaatgcctaattaaattgtttatccaa 2223033  T
Q  104 aca 106  Q
    |||    
T  2223032 aca 2223030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 15 - 105
Target Start/End: Original strand, 22388002 - 22388092
Alignment:
Q  15 tttatcttctgttatagaaaaaacttatacataaacacttaaaaaatacgagcttatgctataaacacttaactaagttgtttatccaaac 105  Q
    |||||||| ||||||||||| | ||||| ||||| ||||||||  ||| | | ||||| ||||| | ||||| ||||||||||||||||||    
T  22388002 tttatcttttgttatagaaatagcttatccataagcacttaaatgataagtgtttatgttataagcgcttaattaagttgtttatccaaac 22388092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 4 - 106
Target Start/End: Complemental strand, 31341177 - 31341075
Alignment:
Q  4 tttgactttaatttatcttctgttatagaaaaaacttatacataaacacttaaaaaatacgagcttatgctataaacacttaactaagttgtttatccaa 103  Q
    |||||||||| |||||||| ||||||| ||| | ||||||||||| || ||| |  ||| | |||||||| |||| | ||| | ||||||||||||||||    
T  31341177 tttgactttattttatcttttgttatacaaatagcttatacataagcatttagatgataagcgcttatgcaataagcgcttgattaagttgtttatccaa 31341078  T
Q  104 aca 106  Q
    |||    
T  31341077 aca 31341075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 55
Target Start/End: Original strand, 46223162 - 46223210
Alignment:
Q  7 gactttaatttatcttctgttatagaaaaaacttatacataaacactta 55  Q
    |||||||||||||||| |||||| |||| | ||||||||||||||||||    
T  46223162 gactttaatttatcttttgttatggaaatagcttatacataaacactta 46223210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 55
Target Start/End: Complemental strand, 2894796 - 2894749
Alignment:
Q  8 actttaatttatcttctgttatagaaaaaacttatacataaacactta 55  Q
    ||||||||||||||| ||||||||||| | ||||||||| ||||||||    
T  2894796 actttaatttatcttttgttatagaaatagcttatacatgaacactta 2894749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 55
Target Start/End: Complemental strand, 28165074 - 28165023
Alignment:
Q  4 tttgactttaatttatcttctgttatagaaaaaacttatacataaacactta 55  Q
    |||||||| | |||||||| ||||||||||| ||||||||||||| ||||||    
T  28165074 tttgacttcattttatcttttgttatagaaagaacttatacataagcactta 28165023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 54
Target Start/End: Original strand, 35808991 - 35809041
Alignment:
Q  4 tttgactttaatttatcttctgttatagaaaaaacttatacataaacactt 54  Q
    ||||||| || |||||||| ||||||||||| | |||||||||||||||||    
T  35808991 tttgactatattttatcttttgttatagaaatagcttatacataaacactt 35809041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 100
Target Start/End: Complemental strand, 5939067 - 5938971
Alignment:
Q  4 tttgactttaatttatcttctgttatagaaaaaacttatacataaacacttaaaaaatacgagcttatgctataaacacttaactaagttgtttatc 100  Q
    |||||||||| || || || ||||||| ||| ||||||||||||||||||||   ||||   |||| ||| |||| | ||||| |||||||||||||    
T  5939067 tttgactttatttaattttttgttataaaaataacttatacataaacacttatgtaataatcgcttctgcaataagcgcttaattaagttgtttatc 5938971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 106
Target Start/End: Original strand, 28691971 - 28692003
Alignment:
Q  74 tataaacacttaactaagttgtttatccaaaca 106  Q
    ||||||||||||| |||||||||||||||||||    
T  28691971 tataaacacttaattaagttgtttatccaaaca 28692003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 48
Target Start/End: Complemental strand, 35536090 - 35536046
Alignment:
Q  4 tttgactttaatttatcttctgttatagaaaaaacttatacataa 48  Q
    |||||||||| |||||||| ||||||||||| | |||||||||||    
T  35536090 tttgactttattttatcttatgttatagaaatagcttatacataa 35536046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 7)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 6 - 105
Target Start/End: Original strand, 8422926 - 8423025
Alignment:
Q  6 tgactttaatttatcttctgttatagaaaaaacttatacataaacacttaaaaaatacgagcttatgctataaacacttaactaagttgtttatccaaac 105  Q
    |||||||| |||||||| | ||||| ||| | ||||||||||| ||| || |  ||||  | ||||||||||||||||||| ||||||||||||||||||    
T  8422926 tgactttattttatctttttttataaaaatagcttatacataagcacatatatgatacatgattatgctataaacacttaattaagttgtttatccaaac 8423025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 7 - 111
Target Start/End: Complemental strand, 24929473 - 24929369
Alignment:
Q  7 gactttaatttatcttctgttatagaaaaaacttatacataaacacttaaaaaatacgagcttatgctataaacacttaactaagttgtttatccaaaca 106  Q
    ||||||| |||||||| ||||||||||| |  | ||||| ||||| ||| |  ||| ||| ||||| |||||||||| || |||||||||||||||||||    
T  24929473 gactttattttatcttttgttatagaaatagttcatacaaaaacaattatatgataagagattatgttataaacactcaattaagttgtttatccaaaca 24929374  T
Q  107 aaacc 111  Q
     ||||    
T  24929373 gaacc 24929369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 4 - 56
Target Start/End: Original strand, 51044546 - 51044598
Alignment:
Q  4 tttgactttaatttatcttctgttatagaaaaaacttatacataaacacttaa 56  Q
    |||||||||| |||||||| ||||||||||| | |||||||||||||||||||    
T  51044546 tttgactttattttatcttttgttatagaaatagcttatacataaacacttaa 51044598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 102
Target Start/End: Original strand, 40709478 - 40709565
Alignment:
Q  15 tttatcttctgttatagaaaaaacttatacataaacacttaaaaaatacgagcttatgctataaacacttaactaagttgtttatcca 102  Q
    |||||||| ||||||||||| | |||||| |||| |||||| | | || | | ||||| ||||| ||||||| |||||||||||||||    
T  40709478 tttatcttttgttatagaaacagcttataaataagcacttatatattaagtggttatgatataagcacttaattaagttgtttatcca 40709565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 99
Target Start/End: Complemental strand, 55599149 - 55599054
Alignment:
Q  4 tttgactttaatttatcttctgttatagaaaaaacttatacataaacacttaaaaaatacgagcttatgctataaacacttaactaagttgtttat 99  Q
    |||||||||| ||| |||| ||||| | ||  |||||||| |||||||||||    ||||| ||||||||||||  ||||||| ||||||||||||    
T  55599149 tttgactttattttgtcttttgttacaaaagtaacttatatataaacacttatgtgatacgcgcttatgctatatgcacttaattaagttgtttat 55599054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 12 - 104
Target Start/End: Original strand, 21043308 - 21043401
Alignment:
Q  12 taatttatcttctgtta-tagaaaaaacttatacataaacacttaaaaaatacgagcttatgctataaacacttaactaagttgtttatccaaa 104  Q
    ||||||||||| ||||| |||||| |||||||||| |||||||| ||  ||| | |  |||||||||| ||||| | ||||||||||| |||||    
T  21043308 taatttatcttttgttaatagaaataacttatacacaaacacttgaatgataagcgtctatgctataagcacttcattaagttgtttacccaaa 21043401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 48
Target Start/End: Complemental strand, 19422401 - 19422357
Alignment:
Q  4 tttgactttaatttatcttctgttatagaaaaaacttatacataa 48  Q
    |||||||||| | |||||| ||||||||||| |||||||||||||    
T  19422401 tttgactttattatatcttttgttatagaaataacttatacataa 19422357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0590 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0590
Description:

Target: scaffold0590; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 4 - 102
Target Start/End: Original strand, 1161 - 1259
Alignment:
Q  4 tttgactttaatttatcttctgttatagaaaaaacttatacataaacacttaaaaaatacgagcttatgctataaacacttaactaagttgtttatcca 102  Q
    |||||||||| |||||||| ||||||||||| | ||||||||||| |||||| |  |||   | |||||||||||  |||||| |||||||||||||||    
T  1161 tttgactttattttatcttttgttatagaaatagcttatacataagcacttatatgatagacgtttatgctataagtacttaattaagttgtttatcca 1259  T

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Target: scaffold0275 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0275
Description:

Target: scaffold0275; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 4 - 102
Target Start/End: Complemental strand, 2814 - 2716
Alignment:
Q  4 tttgactttaatttatcttctgttatagaaaaaacttatacataaacacttaaaaaatacgagcttatgctataaacacttaactaagttgtttatcca 102  Q
    |||||||||| |||||||| ||||||||||| | ||||||||||| |||||| |  |||   | |||||||||||  |||||| |||||||||||||||    
T  2814 tttgactttattttatcttttgttatagaaatagcttatacataagcacttatatgatagacgtttatgctataagtacttaattaagttgtttatcca 2716  T

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Target: chr3 (Bit Score: 37; Significance: 0.000000000006; HSPs: 11)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 4 - 56
Target Start/End: Original strand, 24605103 - 24605155
Alignment:
Q  4 tttgactttaatttatcttctgttatagaaaaaacttatacataaacacttaa 56  Q
    |||||||||| || ||||| ||||||||||| |||||||||||||||||||||    
T  24605103 tttgactttatttcatcttttgttatagaaataacttatacataaacacttaa 24605155  T

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Target: chr3; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 40 - 106
Target Start/End: Complemental strand, 2201071 - 2201005
Alignment:
Q  40 tatacataaacacttaaaaaatacgagcttatgctataaacacttaactaagttgtttatccaaaca 106  Q
    |||||||||||||||||| |||| || |||||||||||| | ||||  |||||||||||||| ||||    
T  2201071 tatacataaacacttaaataataagaccttatgctataagcgcttagttaagttgtttatcctaaca 2201005  T

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Target: chr3; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 66 - 107
Target Start/End: Original strand, 24235817 - 24235858
Alignment:
Q  66 gcttatgctataaacacttaactaagttgtttatccaaacaa 107  Q
    ||||||| ||||||||||||| ||||||||||||||||||||    
T  24235817 gcttatgttataaacacttaattaagttgtttatccaaacaa 24235858  T

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Target: chr3; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 66 - 106
Target Start/End: Original strand, 37308214 - 37308254
Alignment:
Q  66 gcttatgctataaacacttaactaagttgtttatccaaaca 106  Q
    ||||||||||||| ||||||| |||||||||||||||||||    
T  37308214 gcttatgctataagcacttaattaagttgtttatccaaaca 37308254  T

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Target: chr3; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 107
Target Start/End: Original strand, 43116526 - 43116618
Alignment:
Q  15 tttatcttctgttatagaaaaaacttatacataaacacttaaaaaatacgagcttatgctataaacacttaactaagttgtttatccaaacaa 107  Q
    |||||||| ||||||||||| | |||| ||||||||||||  |  |||     |||||||||||||||| || ||||||||||||||||||||    
T  43116526 tttatcttttgttatagaaatagcttacacataaacacttgtatgataaacatttatgctataaacactaaattaagttgtttatccaaacaa 43116618  T

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Target: chr3; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 106
Target Start/End: Complemental strand, 27294328 - 27294237
Alignment:
Q  15 tttatcttctgttatagaaaaaacttatacataaacacttaaaaaatacgagcttatgctataaacacttaactaagttgtttatccaaaca 106  Q
    |||||||| |||||||||| |||||||| ||||| |||||| |   || | |||||| ||||||||  |||| |||| ||||||||||||||    
T  27294328 tttatcttttgttatagaagaaacttatgcataagcacttatacgttaagtgcttatactataaacggttaattaagctgtttatccaaaca 27294237  T

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Target: chr3; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 102
Target Start/End: Original strand, 33965578 - 33965677
Alignment:
Q  4 tttgactttaatttatcttctgttatagaaaa-aacttatacataaacacttaaaaaatacgagcttatgctataaacacttaactaagttgtttatcca 102  Q
    |||||||||| |||| ||| ||||||| |||| ||||| |||| |||||| || | |||||| | ||||||||||| | ||||| |||| ||||||||||    
T  33965578 tttgactttattttaccttttgttataaaaaataacttgtacaaaaacacctatacaatacgtgtttatgctataagcgcttaattaagctgtttatcca 33965677  T

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Target: chr3; HSP #8
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 57
Target Start/End: Original strand, 3182449 - 3182502
Alignment:
Q  4 tttgactttaatttatcttctgttatagaaaaaacttatacataaacacttaaa 57  Q
    |||||||||| |||||||| |  |||||||  ||||||||||||||||||||||    
T  3182449 tttgactttattttatctttttctatagaagtaacttatacataaacacttaaa 3182502  T

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Target: chr3; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 48
Target Start/End: Original strand, 8007782 - 8007826
Alignment:
Q  4 tttgactttaatttatcttctgttatagaaaaaacttatacataa 48  Q
    |||||||||| |||||||| ||||||||||| | |||||||||||    
T  8007782 tttgactttactttatcttttgttatagaaacagcttatacataa 8007826  T

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Target: chr3; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 56
Target Start/End: Original strand, 20192693 - 20192745
Alignment:
Q  4 tttgactttaatttatcttctgttatagaaaaaacttatacataaacacttaa 56  Q
    |||||||||| |||||||| ||||||| ||| | ||||||||||| |||||||    
T  20192693 tttgactttattttatcttttgttatataaatagcttatacataagcacttaa 20192745  T

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Target: chr3; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 48
Target Start/End: Original strand, 48364966 - 48365010
Alignment:
Q  4 tttgactttaatttatcttctgttatagaaaaaacttatacataa 48  Q
    |||||||||| |||||||| |||||| |||| |||||||||||||    
T  48364966 tttgactttattttatcttttgttatcgaaataacttatacataa 48365010  T

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