View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11923_low_1 (Length: 807)

Name: NF11923_low_1
Description: NF11923
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11923_low_1
NF11923_low_1
[»] chr6 (26 HSPs)
chr6 (360-640)||(5613071-5613353)
chr6 (638-793)||(5612825-5612980)
chr6 (289-363)||(4464916-4464990)
chr6 (295-403)||(4089439-4089548)
chr6 (289-350)||(32719412-32719474)
chr6 (289-350)||(33590364-33590425)
chr6 (304-352)||(5613475-5613523)
chr6 (296-403)||(25073288-25073398)
chr6 (290-350)||(1567264-1567325)
chr6 (289-402)||(33184124-33184242)
chr6 (291-401)||(2502404-2502517)
chr6 (289-335)||(26713862-26713908)
chr6 (289-350)||(22788554-22788615)
chr6 (289-350)||(24874971-24875031)
chr6 (289-360)||(22817377-22817448)
chr6 (289-352)||(24379618-24379682)
chr6 (292-350)||(32221986-32222045)
chr6 (320-403)||(33676954-33677036)
chr6 (289-352)||(13380521-13380586)
chr6 (292-354)||(27793646-27793708)
chr6 (328-403)||(34731247-34731323)
chr6 (292-334)||(6688075-6688117)
chr6 (297-350)||(11180203-11180257)
chr6 (328-357)||(17443935-17443964)
chr6 (289-403)||(26574431-26574548)
chr6 (290-334)||(33755048-33755093)
[»] chr8 (39 HSPs)
chr8 (19-162)||(41455427-41455570)
chr8 (265-403)||(41455187-41455324)
chr8 (289-403)||(1839856-1839972)
chr8 (289-403)||(28416197-28416311)
chr8 (293-402)||(27085278-27085389)
chr8 (295-399)||(8948560-8948664)
chr8 (298-354)||(5911471-5911527)
chr8 (289-395)||(9054547-9054657)
chr8 (298-403)||(31598467-31598572)
chr8 (296-353)||(5858307-5858364)
chr8 (295-403)||(31305817-31305926)
chr8 (296-357)||(13406404-13406465)
chr8 (295-350)||(12506238-12506294)
chr8 (291-350)||(23932596-23932656)
chr8 (289-352)||(39193912-39193976)
chr8 (289-350)||(79649-79711)
chr8 (289-350)||(21173894-21173956)
chr8 (289-350)||(41866153-41866215)
chr8 (289-327)||(31297384-31297422)
chr8 (305-363)||(36106580-36106638)
chr8 (292-342)||(39778807-39778856)
chr8 (289-403)||(25033308-25033425)
chr8 (291-343)||(7080031-7080082)
chr8 (291-354)||(10589783-10589847)
chr8 (291-402)||(16424081-16424190)
chr8 (289-352)||(40985110-40985174)
chr8 (291-350)||(43239653-43239712)
chr8 (289-351)||(43733156-43733219)
chr8 (293-350)||(4873299-4873357)
chr8 (296-350)||(8228517-8228571)
chr8 (289-350)||(26772678-26772740)
chr8 (298-355)||(26042181-26042238)
chr8 (293-329)||(44879551-44879587)
chr8 (293-329)||(44880334-44880370)
chr8 (292-354)||(11229262-11229325)
chr8 (289-350)||(43007701-43007763)
chr8 (296-352)||(1840241-1840298)
chr8 (291-328)||(4008984-4009021)
chr8 (301-354)||(10878828-10878881)
[»] chr4 (46 HSPs)
chr4 (289-394)||(9119822-9119927)
chr4 (293-403)||(52430595-52430707)
chr4 (289-354)||(42650615-42650681)
chr4 (291-357)||(47063669-47063735)
chr4 (289-403)||(13985000-13985116)
chr4 (305-403)||(48620208-48620308)
chr4 (299-389)||(21442967-21443057)
chr4 (291-357)||(55813664-55813730)
chr4 (299-354)||(46669991-46670047)
chr4 (289-355)||(4442015-4442082)
chr4 (289-403)||(3075799-3075913)
chr4 (289-350)||(12708870-12708932)
chr4 (289-350)||(29114269-29114331)
chr4 (289-350)||(30198807-30198869)
chr4 (306-354)||(29576188-29576236)
chr4 (289-364)||(49668140-49668216)
chr4 (294-355)||(30307351-30307413)
chr4 (290-350)||(16318600-16318661)
chr4 (293-357)||(18319712-18319777)
chr4 (293-357)||(18398904-18398969)
chr4 (292-352)||(35959177-35959238)
chr4 (289-352)||(18396190-18396254)
chr4 (289-403)||(38365957-38366073)
chr4 (289-357)||(45899372-45899439)
chr4 (289-352)||(46176963-46177027)
chr4 (306-399)||(23902483-23902577)
chr4 (291-401)||(27143108-27143221)
chr4 (289-350)||(28175500-28175562)
chr4 (289-350)||(38136870-38136932)
chr4 (289-333)||(15498830-15498874)
chr4 (308-352)||(52636742-52636786)
chr4 (291-350)||(51974311-51974370)
chr4 (298-356)||(28879979-28880037)
chr4 (289-350)||(45823538-45823600)
chr4 (296-352)||(21081331-21081388)
chr4 (289-403)||(31529947-31530064)
chr4 (289-403)||(38317265-38317382)
chr4 (294-350)||(49936498-49936555)
chr4 (291-350)||(45971544-45971603)
chr4 (291-350)||(8828236-8828295)
chr4 (289-339)||(42954602-42954653)
chr4 (293-352)||(44076585-44076644)
chr4 (296-363)||(54723940-54724007)
chr4 (289-319)||(48620312-48620342)
chr4 (299-348)||(8827866-8827915)
chr4 (289-403)||(37756749-37756866)
[»] chr1 (46 HSPs)
chr1 (289-403)||(49102988-49103104)
chr1 (289-403)||(17556596-17556712)
chr1 (289-403)||(35619540-35619656)
chr1 (292-357)||(12625863-12625928)
chr1 (289-357)||(24436968-24437037)
chr1 (289-350)||(25561353-25561414)
chr1 (300-392)||(34552134-34552227)
chr1 (294-401)||(43036354-43036462)
chr1 (289-352)||(41432802-41432865)
chr1 (291-354)||(42806151-42806214)
chr1 (289-350)||(5584488-5584550)
chr1 (299-357)||(50084102-50084159)
chr1 (292-363)||(46001536-46001608)
chr1 (292-350)||(29092069-29092128)
chr1 (292-350)||(36269726-36269785)
chr1 (289-367)||(41817335-41817414)
chr1 (291-354)||(50097607-50097670)
chr1 (289-350)||(2909101-2909163)
chr1 (289-350)||(17760511-17760573)
chr1 (289-350)||(37649652-37649714)
chr1 (289-350)||(52068173-52068235)
chr1 (292-395)||(10618751-10618855)
chr1 (289-352)||(28848825-28848889)
chr1 (289-349)||(33579219-33579279)
chr1 (292-352)||(42333626-42333686)
chr1 (291-349)||(6537943-6538001)
chr1 (289-350)||(34154364-34154426)
chr1 (297-359)||(45752268-45752329)
chr1 (289-352)||(7915494-7915558)
chr1 (292-350)||(50226023-50226082)
chr1 (289-350)||(36886852-36886914)
chr1 (300-350)||(51839230-51839280)
chr1 (292-403)||(1688256-1688369)
chr1 (296-350)||(39886968-39887024)
chr1 (333-401)||(49851342-49851411)
chr1 (298-350)||(69717-69769)
chr1 (289-352)||(52073484-52073548)
chr1 (289-351)||(50476520-50476583)
chr1 (289-350)||(27255192-27255254)
chr1 (289-350)||(33324617-33324678)
chr1 (291-329)||(41428032-41428070)
chr1 (289-327)||(45565136-45565174)
chr1 (296-403)||(5883647-5883755)
chr1 (300-352)||(23412000-23412053)
chr1 (289-330)||(32287584-32287625)
chr1 (289-403)||(33991469-33991586)
[»] chr2 (48 HSPs)
chr2 (291-403)||(15803117-15803231)
chr2 (291-374)||(31584804-31584888)
chr2 (289-357)||(11522216-11522285)
chr2 (289-403)||(27987595-27987713)
chr2 (289-403)||(28074128-28074246)
chr2 (293-401)||(44954037-44954146)
chr2 (289-403)||(36870193-36870308)
chr2 (291-374)||(9087503-9087586)
chr2 (289-363)||(30072098-30072173)
chr2 (293-403)||(9087738-9087848)
chr2 (289-350)||(1364816-1364878)
chr2 (289-350)||(11515027-11515089)
chr2 (289-350)||(37194250-37194312)
chr2 (289-349)||(34757589-34757650)
chr2 (291-340)||(41100143-41100192)
chr2 (292-403)||(12941837-12941953)
chr2 (297-364)||(36574468-36574534)
chr2 (309-360)||(39181051-39181102)
chr2 (292-350)||(43572583-43572642)
chr2 (289-339)||(3254630-3254680)
chr2 (289-350)||(26905787-26905849)
chr2 (289-350)||(40211986-40212048)
chr2 (289-364)||(21834909-21834986)
chr2 (295-352)||(39819879-39819936)
chr2 (289-352)||(4003409-4003473)
chr2 (291-350)||(30523230-30523289)
chr2 (293-351)||(567369-567427)
chr2 (289-350)||(13018514-13018576)
chr2 (295-352)||(15555388-15555446)
chr2 (289-350)||(6656101-6656165)
chr2 (289-350)||(44656786-44656846)
chr2 (289-352)||(16519125-16519189)
chr2 (289-350)||(21626106-21626168)
chr2 (291-334)||(39205015-39205060)
chr2 (301-335)||(39750150-39750184)
chr2 (295-348)||(35550200-35550253)
chr2 (289-352)||(26599285-26599349)
chr2 (307-354)||(11949885-11949932)
chr2 (294-364)||(37664547-37664618)
chr2 (301-352)||(41656691-41656742)
chr2 (294-364)||(42644626-42644697)
chr2 (289-327)||(13765975-13766013)
chr2 (296-334)||(28539469-28539507)
chr2 (289-334)||(31082814-31082860)
chr2 (291-352)||(36030794-36030856)
chr2 (289-327)||(38293895-38293933)
chr2 (291-329)||(39913260-39913298)
chr2 (296-352)||(5322162-5322219)
[»] chr7 (40 HSPs)
chr7 (289-402)||(4788038-4788150)
chr7 (289-349)||(31055359-31055419)
chr7 (289-403)||(7391446-7391560)
chr7 (296-398)||(1277872-1277976)
chr7 (291-354)||(30301962-30302025)
chr7 (292-398)||(33187885-33187992)
chr7 (292-355)||(31180006-31180068)
chr7 (294-367)||(19791657-19791730)
chr7 (290-352)||(46611864-46611927)
chr7 (289-350)||(2826283-2826345)
chr7 (289-350)||(38505370-38505432)
chr7 (290-350)||(15748986-15749047)
chr7 (291-364)||(22556739-22556812)
chr7 (295-350)||(45940442-45940498)
chr7 (292-350)||(44487356-44487415)
chr7 (289-350)||(16805603-16805665)
chr7 (289-350)||(17818289-17818351)
chr7 (300-357)||(30081354-30081412)
chr7 (289-350)||(33872147-33872209)
chr7 (289-335)||(35264908-35264954)
chr7 (296-352)||(13697263-13697320)
chr7 (297-354)||(38680058-38680115)
chr7 (289-349)||(42253942-42254003)
chr7 (289-357)||(7362683-7362751)
chr7 (296-352)||(42113002-42113058)
chr7 (293-352)||(24924620-24924679)
chr7 (289-350)||(4058175-4058237)
chr7 (295-356)||(12624416-12624477)
chr7 (317-369)||(23772604-23772657)
chr7 (291-335)||(32650429-32650474)
chr7 (295-351)||(23551640-23551696)
chr7 (289-352)||(38137922-38137986)
chr7 (298-354)||(46509257-46509312)
chr7 (290-352)||(17884231-17884291)
chr7 (294-352)||(23466038-23466097)
chr7 (300-399)||(21018741-21018843)
chr7 (301-350)||(21687417-21687467)
chr7 (296-350)||(46442692-46442746)
chr7 (289-403)||(3571795-3571912)
chr7 (301-334)||(44858149-44858182)
[»] chr3 (53 HSPs)
chr3 (291-360)||(3458324-3458393)
chr3 (289-355)||(48444485-48444551)
chr3 (289-402)||(32721097-32721210)
chr3 (289-357)||(53888463-53888532)
chr3 (293-352)||(35283068-35283128)
chr3 (289-356)||(50345683-50345750)
chr3 (292-403)||(46891315-46891428)
chr3 (289-350)||(33944676-33944738)
chr3 (289-350)||(38639572-38639634)
chr3 (291-352)||(45570981-45571043)
chr3 (289-350)||(53664635-53664697)
chr3 (303-360)||(3353979-3354036)
chr3 (289-350)||(51686490-51686551)
chr3 (291-350)||(25754140-25754200)
chr3 (292-350)||(3537191-3537250)
chr3 (289-350)||(33908985-33909047)
chr3 (289-350)||(50948189-50948251)
chr3 (294-363)||(7435656-7435725)
chr3 (294-354)||(11500083-11500144)
chr3 (292-348)||(35989102-35989158)
chr3 (289-352)||(29623218-29623281)
chr3 (297-354)||(27681787-27681845)
chr3 (292-352)||(32858811-32858872)
chr3 (289-350)||(49183679-49183740)
chr3 (289-352)||(1132961-1133025)
chr3 (289-348)||(27197237-27197297)
chr3 (289-403)||(47714709-47714825)
chr3 (296-398)||(2927787-2927890)
chr3 (306-357)||(3333840-3333891)
chr3 (296-357)||(38401952-38402015)
chr3 (297-401)||(38526083-38526190)
chr3 (294-352)||(40118925-40118984)
chr3 (289-367)||(27921930-27922007)
chr3 (289-350)||(44400692-44400754)
chr3 (289-350)||(48908910-48908972)
chr3 (294-350)||(37674181-37674238)
chr3 (289-352)||(517668-517731)
chr3 (295-334)||(50535144-50535184)
chr3 (307-354)||(30697348-30697395)
chr3 (289-351)||(36637782-36637845)
chr3 (306-357)||(54747654-54747705)
chr3 (289-350)||(5939817-5939879)
chr3 (293-350)||(15499339-15499397)
chr3 (294-352)||(16883336-16883394)
chr3 (295-352)||(22225347-22225405)
chr3 (293-350)||(41099767-41099824)
chr3 (291-403)||(46017156-46017269)
chr3 (289-350)||(47359302-47359364)
chr3 (289-330)||(52620861-52620903)
chr3 (292-352)||(21777675-21777736)
chr3 (289-403)||(24242128-24242245)
chr3 (307-352)||(30995851-30995896)
chr3 (292-348)||(44979404-44979461)
[»] chr5 (34 HSPs)
chr5 (289-403)||(35708789-35708905)
chr5 (289-402)||(39428873-39428986)
chr5 (293-348)||(6373123-6373178)
chr5 (293-360)||(29022592-29022659)
chr5 (295-357)||(3938172-3938235)
chr5 (289-356)||(29799624-29799691)
chr5 (296-401)||(3081374-3081480)
chr5 (291-352)||(19389856-19389917)
chr5 (291-374)||(19338613-19338697)
chr5 (289-350)||(5772756-5772818)
chr5 (302-402)||(12064035-12064136)
chr5 (294-350)||(35683514-35683571)
chr5 (291-350)||(39649554-39649614)
chr5 (289-352)||(43496897-43496960)
chr5 (293-350)||(10843027-10843085)
chr5 (289-350)||(38568403-38568465)
chr5 (296-352)||(3925824-3925880)
chr5 (292-363)||(4841899-4841971)
chr5 (291-350)||(10955728-10955788)
chr5 (289-403)||(7398816-7398931)
chr5 (293-393)||(6491123-6491225)
chr5 (289-327)||(41638361-41638399)
chr5 (289-401)||(39011759-39011877)
chr5 (292-354)||(6632628-6632691)
chr5 (298-345)||(15916873-15916920)
chr5 (289-398)||(27480208-27480318)
chr5 (293-350)||(9684821-9684879)
chr5 (289-350)||(10437969-10438031)
chr5 (291-353)||(12150563-12150625)
chr5 (289-334)||(14570076-14570122)
chr5 (298-352)||(22103498-22103551)
chr5 (288-345)||(13294009-13294066)
chr5 (289-403)||(38928738-38928855)
chr5 (289-403)||(41694905-41695022)
[»] scaffold0598 (1 HSPs)
scaffold0598 (289-373)||(9441-9525)
[»] scaffold0248 (1 HSPs)
scaffold0248 (289-350)||(232-294)
[»] scaffold0051 (4 HSPs)
scaffold0051 (289-350)||(6793-6855)
scaffold0051 (289-350)||(7776-7838)
scaffold0051 (293-350)||(731-788)
scaffold0051 (293-350)||(3608-3665)
[»] scaffold0031 (1 HSPs)
scaffold0031 (289-350)||(93542-93604)
[»] scaffold0128 (1 HSPs)
scaffold0128 (289-350)||(26362-26425)
[»] scaffold0471 (1 HSPs)
scaffold0471 (305-363)||(4698-4756)
[»] scaffold0136 (1 HSPs)
scaffold0136 (293-350)||(2063-2121)
[»] scaffold0053 (1 HSPs)
scaffold0053 (293-350)||(29227-29285)
[»] scaffold0274 (1 HSPs)
scaffold0274 (289-352)||(15899-15962)
[»] scaffold0519 (1 HSPs)
scaffold0519 (292-354)||(7494-7557)
[»] scaffold0036 (1 HSPs)
scaffold0036 (293-354)||(82775-82837)
[»] scaffold0028 (1 HSPs)
scaffold0028 (289-327)||(35491-35529)
[»] scaffold0002 (1 HSPs)
scaffold0002 (289-350)||(90911-90973)


Alignment Details
Target: chr6 (Bit Score: 206; Significance: 1e-112; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 360 - 640
Target Start/End: Complemental strand, 5613353 - 5613071
Alignment:
Q  360 caaagtccctccttctgatgtcttatatttcttccacttactcccnnnnnnnnnnnnnncaaaccatccccctttccctccaaaatcgcaaacaaaacat 459  Q
    ||||| |||||||||  |||||||||||||||||||||||||||               ||||||||||||||||||||||||| |||||||||||||||    
T  5613353 caaagcccctccttccaatgtcttatatttcttccacttactcctttttttttctttttcaaaccatccccctttccctccaaactcgcaaacaaaacat 5613254  T
Q  460 taggttcaaaaact--tacaattgtattttcatttacctcacttattggttcattgaagaattgatgcttaattcatacagagaatcatatattttaatt 557  Q
    |||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5613253 taggttcaaaaacacgtacaattgtattttcatttacctcacttattggttcattgaagaattgatgcttaattcatacagagaatcatatattttaatt 5613154  T
Q  558 tttgtctctcagtagcaattttctttaggtgaatatctttcaatagacaattaatagattgaaattacatagatttaaattac 640  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5613153 tttgtctctcagtagcaattttctttaggtgaatatctttcaatagacaattaatagattgaaattacatagatttaaattac 5613071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 144; E-Value: 3e-75
Query Start/End: Original strand, 638 - 793
Target Start/End: Complemental strand, 5612980 - 5612825
Alignment:
Q  638 tacacatcaactaaaaatgtagctcttcagtctctcttacccgacattctttgtctcatctatctttcaagtttgaaatgtttcatttgaagcatattta 737  Q
    |||||||| ||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  5612980 tacacatcgactaaaaatgtagctcttcagtctctcttactcgacattcttcgtctcatctatctttcaagtttgaaatgtttcatttgaagcatattta 5612881  T
Q  738 aatggaggttaattcttatgttggtttctttgccaactttgatcaccacagttttt 793  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5612880 aatggaggttaattcttatgttggtttctttgccaactttgatcaccacagttttt 5612825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 289 - 363
Target Start/End: Complemental strand, 4464990 - 4464916
Alignment:
Q  289 accctcctccaatacaattttttagttccccaaatgaggagggttttatattttgaagaaaaataagcctccaaa 363  Q
    |||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||| |||||    
T  4464990 accctcctccaatacaattttttagttccccaaatgaggaaggttgtatattttgaagaaaaataagcccccaaa 4464916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 295 - 403
Target Start/End: Original strand, 4089439 - 4089548
Alignment:
Q  295 ctccaatacaattttttagttccccaaatgaggagggttttatattttgaagaaaaataagcctcc-aaagtccctccttctgatgtcttatatttcttc 393  Q
    |||||||||||||| |||||||| ||||||||||| ||||||||||||||||||||||||||| || |||| ||||| |||  ||||| | ||||| |||    
T  4089439 ctccaatacaatttcttagttcctcaaatgaggagagttttatattttgaagaaaaataagcccccgaaagcccctcattccaatgtcctctatttattc 4089538  T
Q  394 cacttactcc 403  Q
    ||||||||||    
T  4089539 cacttactcc 4089548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 289 - 350
Target Start/End: Original strand, 32719412 - 32719474
Alignment:
Q  289 accctcctccaatacaattttttagttcc-ccaaatgaggagggttttatattttgaagaaaa 350  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||| |||| |||||||||    
T  32719412 accctcctccaatacaattttttagttcctccaaatgaggagggttttgtattatgaagaaaa 32719474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 289 - 350
Target Start/End: Original strand, 33590364 - 33590425
Alignment:
Q  289 accctcctccaatacaattttttagttccccaaatgaggagggttttatattttgaagaaaa 350  Q
    |||||| |||||||||||||||||| ||||||||||||||||||||| |||| |||||||||    
T  33590364 accctcatccaatacaattttttagctccccaaatgaggagggttttgtattatgaagaaaa 33590425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 304 - 352
Target Start/End: Complemental strand, 5613523 - 5613475
Alignment:
Q  304 aattttttagttccccaaatgaggagggttttatattttgaagaaaaat 352  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||    
T  5613523 aatttttttgttccccaaatgaggagggttttatattttgaagaaaaat 5613475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 296 - 403
Target Start/End: Original strand, 25073288 - 25073398
Alignment:
Q  296 tccaatacaattttt-tagttccccaaa-tgaggagggttttatattttgaagaaaaataagcctcc-aaagtccctccttctgatgtcttatatttctt 392  Q
    |||| |||||||||| |||||||||||| |||||||||||||||||||||||||||||||| || || |||  |||||||||  ||||  | ||||||||    
T  25073288 tccattacaatttttgtagttccccaaaatgaggagggttttatattttgaagaaaaataaacccccaaaaccccctccttccaatgttctctatttctt 25073387  T
Q  393 ccacttactcc 403  Q
    ||| |||||||    
T  25073388 ccatttactcc 25073398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 290 - 350
Target Start/End: Complemental strand, 1567325 - 1567264
Alignment:
Q  290 ccctcctccaatacaattttttagttcc-ccaaatgaggagggttttatattttgaagaaaa 350  Q
    ||||| |||||||||||||||||||||| |||||||||||||||||| |||| |||||||||    
T  1567325 ccctcatccaatacaattttttagttcctccaaatgaggagggttttgtattatgaagaaaa 1567264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 289 - 402
Target Start/End: Complemental strand, 33184242 - 33184124
Alignment:
Q  289 accctcctccaatacaattttttagttccccaaatgaggagggtttta----tattttgaagaaaaataagcct-ccaaagtccctccttctgatgtctt 383  Q
    |||||| || ||||||||||||||||||| ||||||||||||||||||    || ||||||||||||||||||| |||||  || |||||   ||||| |    
T  33184242 accctcttctaatacaattttttagttcctcaaatgaggagggttttatgtttaatttgaagaaaaataagcctgccaaaacccatccttacaatgtcct 33184143  T
Q  384 atatttcttccacttactc 402  Q
      |||||||||||||||||    
T  33184142 ccatttcttccacttactc 33184124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 291 - 401
Target Start/End: Original strand, 2502404 - 2502517
Alignment:
Q  291 cctcctccaatacaattttttagt--tccccaaatgaggagggttttatattttgaagaaaaat-aagcctccaaagtccctccttctgatgtcttatat 387  Q
    |||| |||||||||||||||||||  ||| ||||||| ||| |||||||||| | ||||||||| || || ||||| ||||||||||  ||||| | |||    
T  2502404 cctcatccaatacaattttttagttctccacaaatgaagagagttttatattataaagaaaaataaaccccccaaaatccctccttccaatgtcatctat 2502503  T
Q  388 ttcttccacttact 401  Q
    |||||||| |||||    
T  2502504 ttcttccatttact 2502517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 289 - 335
Target Start/End: Complemental strand, 26713908 - 26713862
Alignment:
Q  289 accctcctccaatacaattttttagttccccaaatgaggagggtttt 335  Q
    |||||||||||||||||||||| ||||||||||||||||||| ||||    
T  26713908 accctcctccaatacaatttttgagttccccaaatgaggaggatttt 26713862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 289 - 350
Target Start/End: Original strand, 22788554 - 22788615
Alignment:
Q  289 accctcctccaatacaattttttagttccccaaatgaggagggttttatattttgaagaaaa 350  Q
    ||||||||||||||||||||||||||||| |||||||| || ||||| |||| | |||||||    
T  22788554 accctcctccaatacaattttttagttcctcaaatgagaagagttttgtattatcaagaaaa 22788615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 289 - 350
Target Start/End: Original strand, 24874971 - 24875031
Alignment:
Q  289 accctcctccaatacaattttttagttccccaaatgaggagggttttatattttgaagaaaa 350  Q
    |||||||||||||||||| |||||||||||||||||||| ||||||  |||| |||||||||    
T  24874971 accctcctccaatacaatgttttagttccccaaatgagg-gggtttagtattatgaagaaaa 24875031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 289 - 360
Target Start/End: Original strand, 22817377 - 22817448
Alignment:
Q  289 accctcctccaatacaattttttagttcccc-aaatgaggagggttttatattttgaagaaaaataagcctcc 360  Q
    |||||| | |||||||| ||||||||||||| |||| |||||| |||||||||||||||||||||||| ||||    
T  22817377 accctctttcaatacaa-tttttagttccccaaaataaggaggattttatattttgaagaaaaataagtctcc 22817448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 289 - 352
Target Start/End: Complemental strand, 24379682 - 24379618
Alignment:
Q  289 accctcctccaatacaattttttagttcccc-aaatgaggagggttttatattttgaagaaaaat 352  Q
    |||||||| ||||||||||||| |||| | | |||||||||||||||| ||||||||||||||||    
T  24379682 accctccttcaatacaatttttgagtttctctaaatgaggagggttttgtattttgaagaaaaat 24379618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 292 - 350
Target Start/End: Complemental strand, 32222045 - 32221986
Alignment:
Q  292 ctcctccaatacaattttttagttcc-ccaaatgaggagggttttatattttgaagaaaa 350  Q
    |||||||||||||||||||||||||| |||||||||||| |||| ||||| | |||||||    
T  32222045 ctcctccaatacaattttttagttcctccaaatgaggagagtttgatattataaagaaaa 32221986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 320 - 403
Target Start/End: Complemental strand, 33677036 - 33676954
Alignment:
Q  320 aaatgaggagggttttatattttgaagaaaaataagcctccaaagtccctccttctgatgtcttatatttcttccacttactcc 403  Q
    |||||||||| |||||||||||||||||||||||||||  |||||   |||||||  ||||| | ||||||||||||| |||||    
T  33677036 aaatgaggagagttttatattttgaagaaaaataagcccacaaag-agctccttccaatgtcctctatttcttccactaactcc 33676954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 289 - 352
Target Start/End: Complemental strand, 13380586 - 13380521
Alignment:
Q  289 accctcctccaatacaattttttagttcccc--aaatgaggagggttttatattttgaagaaaaat 352  Q
    |||||| ||||||||||||||| ||||||||  ||||||||| | ||||||||| |||||||||||    
T  13380586 accctcttccaatacaatttttgagttccccccaaatgaggatgattttatattatgaagaaaaat 13380521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 292 - 354
Target Start/End: Original strand, 27793646 - 27793708
Alignment:
Q  292 ctcctccaatacaattttttagttccccaaatgaggagggttttatattttgaagaaaaataa 354  Q
    ||||| |||| |||| |||||||| || ||| | |||||||||||||||||||||||||||||    
T  27793646 ctccttcaatccaatattttagtttcctaaacggggagggttttatattttgaagaaaaataa 27793708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 328 - 403
Target Start/End: Original strand, 34731247 - 34731323
Alignment:
Q  328 agggttttatattttgaagaaaaataagc-ctccaaagtccctccttctgatgtcttatatttcttccacttactcc 403  Q
    ||||||| ||||||||||||||||||||| | ||||||  |||||||   ||||||| |||||||| ||||||||||    
T  34731247 agggtttcatattttgaagaaaaataagctccccaaagctcctcctttcaatgtcttctatttcttacacttactcc 34731323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 292 - 334
Target Start/End: Original strand, 6688075 - 6688117
Alignment:
Q  292 ctcctccaatacaattttttagttccccaaatgaggagggttt 334  Q
    ||||||||||||||||||||||||||| |||| ||||| ||||    
T  6688075 ctcctccaatacaattttttagttccctaaataaggagagttt 6688117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 297 - 350
Target Start/End: Original strand, 11180203 - 11180257
Alignment:
Q  297 ccaatacaattttttagttcc-ccaaatgaggagggttttatattttgaagaaaa 350  Q
    ||||||||||| ||||||||| |||||||||||||||||| |||| || ||||||    
T  11180203 ccaatacaattctttagttcctccaaatgaggagggttttgtattatggagaaaa 11180257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 328 - 357
Target Start/End: Complemental strand, 17443964 - 17443935
Alignment:
Q  328 agggttttatattttgaagaaaaataagcc 357  Q
    ||||||||||||||||||||||||||||||    
T  17443964 agggttttatattttgaagaaaaataagcc 17443935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 289 - 403
Target Start/End: Original strand, 26574431 - 26574548
Alignment:
Q  289 accctcctccaatacaattttttagtt-ccccaaatgaggagggttttatattttga-agaaaaataagcctccaaagtc-cctccttctgatgtcttat 385  Q
    ||||||| |||||||||||||| |||| |||||||||||| || |||| |||| |||   |||||| | ||| |||||||  |||||||  ||||||| |    
T  26574431 accctcccccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaaccttcaaagtcatctccttccaatgtcttct 26574530  T
Q  386 atttcttccacttactcc 403  Q
    ||||||||||||| ||||    
T  26574531 atttcttccacttgctcc 26574548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 290 - 334
Target Start/End: Complemental strand, 33755093 - 33755048
Alignment:
Q  290 ccctcctccaatacaattttttag-ttccccaaatgaggagggttt 334  Q
    |||||||||||||||||| ||||| ||||||||||||||| |||||    
T  33755093 ccctcctccaatacaattgtttagtttccccaaatgaggaaggttt 33755048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 144; Significance: 3e-75; HSPs: 39)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 144; E-Value: 3e-75
Query Start/End: Original strand, 19 - 162
Target Start/End: Complemental strand, 41455570 - 41455427
Alignment:
Q  19 gtaagcttgccctggttggtgaataatggaaacgagaaagccatagtttgtaacagacgtttgaccatttaaaaaagaggggaggtaagtgaatttagaa 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41455570 gtaagcttgccctggttggtgaataatggaaacgagaaagccatagtttgtaacagacgtttgaccatttaaaaaagaggggaggtaagtgaatttagaa 41455471  T
Q  119 aattagagggggtgtttgtaggtcaatgtaatttaccctaatac 162  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  41455470 aattagagggggtgtttgtaggtcaatgtaatttaccctaatac 41455427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 123; E-Value: 9e-63
Query Start/End: Original strand, 265 - 403
Target Start/End: Complemental strand, 41455324 - 41455187
Alignment:
Q  265 actctcgcaattcccaaacccccgaccctcctccaatacaattttttagttccccaaatgaggagggttttatattttgaagaaaaataagcctccaaag 364  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||    
T  41455324 actctcgcaattcccaaacccc-gaccctcctccaatacaattttttagtttcccaaatgaggagggttttatattttgaagaaaaataagcccccaaag 41455226  T
Q  365 tccctccttctgatgtcttatatttcttccacttactcc 403  Q
    |||||||||||||||||||||||||||||||||||||||    
T  41455225 tccctccttctgatgtcttatatttcttccacttactcc 41455187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 289 - 403
Target Start/End: Original strand, 1839856 - 1839972
Alignment:
Q  289 accctcctccaatacaattttttagttcccc-aaatgaggagggttttatattttgaagaaaaataag-cctccaaagtccctccttctgatgtcttata 386  Q
    |||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| ||||||||| ||||| | |  ||||| | ||    
T  1839856 accctcctccaatacaatttttaagttcccccaaatgaggagggttttatattttgaagaaaaataagccctccaaagcccctcttcccaatgtcctcta 1839955  T
Q  387 tttcttccacttactcc 403  Q
    |||||||||||||||||    
T  1839956 tttcttccacttactcc 1839972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 289 - 403
Target Start/End: Original strand, 28416197 - 28416311
Alignment:
Q  289 accctcctccaatacaattttttagttccccaaatgaggagggttttatattttgaagaaaaataagcctccaaagtccctccttctgatgtcttatatt 388  Q
    |||||| |||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||| || ||||||||| ||||   |||||| | ||||    
T  28416197 accctcatccaatacaattttgtagttccccaaataaggagggttttatattttgaagaaaaataaccccccaaagtccttcctctcgatgtcctttatt 28416296  T
Q  389 tcttccacttactcc 403  Q
    | |||||||||||||    
T  28416297 ttttccacttactcc 28416311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 293 - 402
Target Start/End: Complemental strand, 27085389 - 27085278
Alignment:
Q  293 tcctccaatacaattttttagttccccaaatgaggagggttttatattttgaagaaaaataag--cctccaaagtccctccttctgatgtcttatatttc 390  Q
    |||||||||||||||||||||||||||||||||| || |||||||||||| ||||||||||||  || |||||| |||||||||  ||||| | ||||||    
T  27085389 tcctccaatacaattttttagttccccaaatgagaagagttttatattttaaagaaaaataagtccccccaaagcccctccttcaaatgtcctctatttc 27085290  T
Q  391 ttccacttactc 402  Q
    ||||||||||||    
T  27085289 ttccacttactc 27085278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 295 - 399
Target Start/End: Complemental strand, 8948664 - 8948560
Alignment:
Q  295 ctccaatacaattttttagttccccaaatgaggagggttttatattttgaagaaaaataagcctccaaagtccctccttctgatgtcttatatttcttcc 394  Q
    |||||||||||||||||||||||| |||||| |||||||||| ||||||||||||||||||||  ||||| ||||||| |  | ||| | ||||||||||    
T  8948664 ctccaatacaattttttagttcccaaaatgacgagggttttacattttgaagaaaaataagcccacaaagcccctcctcccaaagtcctctatttcttcc 8948565  T
Q  395 actta 399  Q
    |||||    
T  8948564 actta 8948560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 298 - 354
Target Start/End: Original strand, 5911471 - 5911527
Alignment:
Q  298 caatacaattttttagttccccaaatgaggagggttttatattttgaagaaaaataa 354  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  5911471 caatacaattttttagttccccaaatgaggagggttttatattttaaagaaaaataa 5911527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 289 - 395
Target Start/End: Original strand, 9054547 - 9054657
Alignment:
Q  289 accctcctccaatacaatttttt--agttccc-caaatgaggagggttttatattttgaagaaaaataag-cctccaaagtccctccttctgatgtctta 384  Q
    |||||||||||||||||||||||  |||| || |||||||||||| |||| ||||||||||||||||||| |||||||||||||||||||  ||||  ||    
T  9054547 accctcctccaatacaattttttttagtttcctcaaatgaggaggattttgtattttgaagaaaaataagccctccaaagtccctccttccaatgttcta 9054646  T
Q  385 tatttcttcca 395  Q
    ||||| |||||    
T  9054647 tatttattcca 9054657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 298 - 403
Target Start/End: Original strand, 31598467 - 31598572
Alignment:
Q  298 caatacaattttttagttccccaaatgaggagggttttatattttgaagaaaaataagcctcca-aagtccctccttctgatgtcttatatttcttccac 396  Q
    |||||||||||||| |||| | ||||||||||| |||||||||||||||||||||||||| ||| ||  |||||||||  ||||| | ||||||||||||    
T  31598467 caatacaatttttt-gttctcaaaatgaggaggattttatattttgaagaaaaataagcccccacaaacccctccttccaatgtcctctatttcttccac 31598565  T
Q  397 ttactcc 403  Q
    |||||||    
T  31598566 ttactcc 31598572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 296 - 353
Target Start/End: Original strand, 5858307 - 5858364
Alignment:
Q  296 tccaatacaattttttagttccccaaatgaggagggttttatattttgaagaaaaata 353  Q
    |||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||    
T  5858307 tccaatacaattttttagtttcccaaatgatgagggttttatattttgaagaaaaata 5858364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 295 - 403
Target Start/End: Original strand, 31305817 - 31305926
Alignment:
Q  295 ctccaatacaattttttagttccccaaatgaggagggttttatattttgaagaaaaataagcct-ccaaagtccctccttctgatgtcttatatttcttc 393  Q
    ||||||||||||| ||| ||||||||||| | |||||||||| ||||||||||||||||||||| |||||| || |  |||  ||||| | |||||||||    
T  31305817 ctccaatacaattgtttcgttccccaaattaagagggttttacattttgaagaaaaataagcctcccaaagcccttttttcctatgtcatctatttcttc 31305916  T
Q  394 cacttactcc 403  Q
    ||||||||||    
T  31305917 cacttactcc 31305926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 296 - 357
Target Start/End: Complemental strand, 13406465 - 13406404
Alignment:
Q  296 tccaatacaattttttagttccccaaatgaggagggttttatattttgaagaaaaataagcc 357  Q
    |||||| ||||||||||||||||||||||||||  ||||||||||||||||||| |||||||    
T  13406465 tccaattcaattttttagttccccaaatgaggattgttttatattttgaagaaatataagcc 13406404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 295 - 350
Target Start/End: Original strand, 12506238 - 12506294
Alignment:
Q  295 ctccaatacaattttttagttcccc-aaatgaggagggttttatattttgaagaaaa 350  Q
    ||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||    
T  12506238 ctccaatacaattttttagttcccccaaatgaggagggtttaatattttgaagaaaa 12506294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 291 - 350
Target Start/End: Original strand, 23932596 - 23932656
Alignment:
Q  291 cctcctccaatacaattttttagttcc-ccaaatgaggagggttttatattttgaagaaaa 350  Q
    ||||||||||||||||||||||||||| |||||||||||||||||| |||| |||||||||    
T  23932596 cctcctccaatacaattttttagttcctccaaatgaggagggttttgtattatgaagaaaa 23932656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 289 - 352
Target Start/End: Complemental strand, 39193976 - 39193912
Alignment:
Q  289 accctcctccaatacaattttttagttcccc-aaatgaggagggttttatattttgaagaaaaat 352  Q
    ||||||||||||||||| ||||||||||||| |||||| |||||||||||||| |||||||||||    
T  39193976 accctcctccaatacaactttttagttcccccaaatgaagagggttttatattatgaagaaaaat 39193912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 289 - 350
Target Start/End: Original strand, 79649 - 79711
Alignment:
Q  289 accctcctccaatacaattttttagtt-ccccaaatgaggagggttttatattttgaagaaaa 350  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||  |||| |||||||||    
T  79649 accctcctccaatacaattttttagttcccccaaatgaggagggtttagtattatgaagaaaa 79711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 289 - 350
Target Start/End: Original strand, 21173894 - 21173956
Alignment:
Q  289 accctcctccaatacaattttttagttcc-ccaaatgaggagggttttatattttgaagaaaa 350  Q
    |||||||||||||| |||||||||||||| |||||||||||||||||| |||| |||||||||    
T  21173894 accctcctccaatataattttttagttcctccaaatgaggagggttttgtattatgaagaaaa 21173956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 289 - 350
Target Start/End: Original strand, 41866153 - 41866215
Alignment:
Q  289 accctcctccaatacaattttttag-ttccccaaatgaggagggttttatattttgaagaaaa 350  Q
    ||||||||||||||||||||||||| |||||||||| |||||||||| ||||| |||||||||    
T  41866153 accctcctccaatacaattttttagtttccccaaataaggagggtttaatattatgaagaaaa 41866215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 289 - 327
Target Start/End: Original strand, 31297384 - 31297422
Alignment:
Q  289 accctcctccaatacaattttttagttccccaaatgagg 327  Q
    |||||||||||||||||||||||||||||||||||||||    
T  31297384 accctcctccaatacaattttttagttccccaaatgagg 31297422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 305 - 363
Target Start/End: Original strand, 36106580 - 36106638
Alignment:
Q  305 attttttagttccccaaatgaggagggttttatattttgaagaaaaataagcctccaaa 363  Q
    |||||||||||||| | | |||||| |||||||||||||||||||||||||||| ||||    
T  36106580 attttttagttccctatacgaggagagttttatattttgaagaaaaataagccttcaaa 36106638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 292 - 342
Target Start/End: Complemental strand, 39778856 - 39778807
Alignment:
Q  292 ctcctccaatacaattttttagttccccaaatgaggagggttttatatttt 342  Q
    ||||||||||||||||||||| ||||||||| |||||||||||||||||||    
T  39778856 ctcctccaatacaatttttta-ttccccaaaggaggagggttttatatttt 39778807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 289 - 403
Target Start/End: Complemental strand, 25033425 - 25033308
Alignment:
Q  289 accctcctccaatacaattttttagttcccc-aaatgaggagggttttatattttgaagaaaaa-taagcctccaaag-tccctccttctgatgtcttat 385  Q
    ||||||| |||||||||||||| |||||||| ||||||||| | |||| |||| |||  ||||| | | ||||||||| || ||||| | |||||||| |    
T  25033425 accctcccccaatacaatttttgagttcccccaaatgaggatgattttttattatgagtaaaaaattaacctccaaagctctctcctcccgatgtcttct 25033326  T
Q  386 atttcttccacttactcc 403  Q
    ||||||||||||||||||    
T  25033325 atttcttccacttactcc 25033308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 291 - 343
Target Start/End: Original strand, 7080031 - 7080082
Alignment:
Q  291 cctcctccaatacaattttttagttccccaaatgaggagggttttatattttg 343  Q
    |||| |||||||||||||||||||| ||||||| |||||||||||||||||||    
T  7080031 cctcttccaatacaattttttagtt-cccaaataaggagggttttatattttg 7080082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 291 - 354
Target Start/End: Complemental strand, 10589847 - 10589783
Alignment:
Q  291 cctcctccaatacaattttttagttc-cccaaatgaggagggttttatattttgaagaaaaataa 354  Q
    ||||||||||||||||||||||||||  | ||||||| | | |||||||||||||||||||||||    
T  10589847 cctcctccaatacaattttttagttcttctaaatgagaatgattttatattttgaagaaaaataa 10589783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 291 - 402
Target Start/End: Complemental strand, 16424190 - 16424081
Alignment:
Q  291 cctcctccaatacaattttttagttccccaaatgaggagggttttatattttgaagaaaaataagcctccaaagtccctccttctgatgtcttatatttc 390  Q
    ||||||| ||||||||||||||||||| | |||||  | |||||  |||||||||||||||||||||  ||||   || ||||   ||||||| ||||||    
T  16424190 cctcctctaatacaattttttagttcctcgaatgataatggtttcttattttgaagaaaaataagccctcaaa--accccctttcaatgtcttctatttc 16424093  T
Q  391 ttccacttactc 402  Q
    ||||||||||||    
T  16424092 ttccacttactc 16424081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 289 - 352
Target Start/End: Original strand, 40985110 - 40985174
Alignment:
Q  289 accctcctccaatacaattttttagtt-ccccaaatgaggagggttttatattttgaagaaaaat 352  Q
    |||||||||||||||||||||| |||| ||||||||||||||| |||| |||| |||| ||||||    
T  40985110 accctcctccaatacaatttttgagttcccccaaatgaggaggattttgtattatgaataaaaat 40985174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 291 - 350
Target Start/End: Complemental strand, 43239712 - 43239653
Alignment:
Q  291 cctcctccaatacaattttttagttccccaaatgaggagggttttatattttgaagaaaa 350  Q
    |||| ||||||||||||||||| ||||||||||||||||| |||| | || |||||||||    
T  43239712 cctcatccaatacaattttttaattccccaaatgaggaggcttttgtgttatgaagaaaa 43239653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 289 - 351
Target Start/End: Original strand, 43733156 - 43733219
Alignment:
Q  289 accctcctccaatacaattttttagttccc-caaatgaggagggttttatattttgaagaaaaa 351  Q
    |||||||||||||||||||||||| ||||| |||||||||||| |||| |||| |||| |||||    
T  43733156 accctcctccaatacaattttttaattccctcaaatgaggaggattttgtattatgaataaaaa 43733219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 293 - 350
Target Start/End: Original strand, 4873299 - 4873357
Alignment:
Q  293 tcctccaatacaattttttagttccc-caaatgaggagggttttatattttgaagaaaa 350  Q
    ||||||||| ||||| |||||||||| |||||||||||||||| ||||| |||||||||    
T  4873299 tcctccaatgcaattgtttagttccctcaaatgaggagggtttcatattatgaagaaaa 4873357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 296 - 350
Target Start/End: Complemental strand, 8228571 - 8228517
Alignment:
Q  296 tccaatacaattttttagttccccaaatgaggagggttttatattttgaagaaaa 350  Q
    |||||||| ||||||||||||||||||||| ||||||||| |||| |||| ||||    
T  8228571 tccaatacgattttttagttccccaaatgatgagggttttgtattatgaaaaaaa 8228517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 289 - 350
Target Start/End: Original strand, 26772678 - 26772740
Alignment:
Q  289 accctcctccaatacaattttttagttcc-ccaaatgaggagggttttatattttgaagaaaa 350  Q
    |||||| ||||||||||||||||||||||  ||||||| ||||||||| |||| |||||||||    
T  26772678 accctcatccaatacaattttttagttccttcaaatgatgagggttttgtattatgaagaaaa 26772740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 298 - 355
Target Start/End: Complemental strand, 26042238 - 26042181
Alignment:
Q  298 caatacaattttttagttccccaaatgaggagggttttatattttgaagaaaaataag 355  Q
    ||||||||||||| |||||  |||| || ||||||||||||||||||| |||||||||    
T  26042238 caatacaatttttgagttctgcaaacgatgagggttttatattttgaataaaaataag 26042181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 293 - 329
Target Start/End: Complemental strand, 44879587 - 44879551
Alignment:
Q  293 tcctccaatacaattttttagttccccaaatgaggag 329  Q
    |||||||||||||||||||||||||| ||||||||||    
T  44879587 tcctccaatacaattttttagttccctaaatgaggag 44879551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 293 - 329
Target Start/End: Original strand, 44880334 - 44880370
Alignment:
Q  293 tcctccaatacaattttttagttccccaaatgaggag 329  Q
    |||||||||||||||||||||||||| ||||||||||    
T  44880334 tcctccaatacaattttttagttccctaaatgaggag 44880370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 292 - 354
Target Start/End: Original strand, 11229262 - 11229325
Alignment:
Q  292 ctcctccaatacaattttttagttcc-ccaaatgaggagggttttatattttgaagaaaaataa 354  Q
    ||||| |||||||||||||||||||| |||||||| || | |||| |||| |||||||||||||    
T  11229262 ctccttcaatacaattttttagttcctccaaatgacgaagattttgtattatgaagaaaaataa 11229325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 289 - 350
Target Start/End: Complemental strand, 43007763 - 43007701
Alignment:
Q  289 accctcctccaatacaattttttag-ttccccaaatgaggagggttttatattttgaagaaaa 350  Q
    |||||||| |||||||||||||||| ||||| |||||||||| ||||| |||| | |||||||    
T  43007763 accctccttcaatacaattttttagtttcccaaaatgaggagagttttgtattataaagaaaa 43007701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 296 - 352
Target Start/End: Original strand, 1840241 - 1840298
Alignment:
Q  296 tccaatacaattttttagttcc-ccaaatgaggagggttttatattttgaagaaaaat 352  Q
    |||||||||| | ||||||||| |||||||||||||||||| |||  |||||||||||    
T  1840241 tccaatacaactatttagttcctccaaatgaggagggttttgtatcatgaagaaaaat 1840298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 291 - 328
Target Start/End: Complemental strand, 4009021 - 4008984
Alignment:
Q  291 cctcctccaatacaattttttagttccccaaatgagga 328  Q
    |||||||||| ||||||||| |||||||||||||||||    
T  4009021 cctcctccaacacaatttttaagttccccaaatgagga 4008984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 301 - 354
Target Start/End: Original strand, 10878828 - 10878881
Alignment:
Q  301 tacaattttttagttccccaaatgaggagggttttatattttgaagaaaaataa 354  Q
    |||||||||  |||| || ||||||||||| |||||||||| ||||||||||||    
T  10878828 tacaattttaaagttgcctaaatgaggaggattttatatttggaagaaaaataa 10878881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 70; Significance: 4e-31; HSPs: 46)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 289 - 394
Target Start/End: Original strand, 9119822 - 9119927
Alignment:
Q  289 accctcctccaatacaattttttagttccccaaatgaggagggttttatattttgaagaaaaataagcctccaaagtccctccttctgatgtcttatatt 388  Q
    |||||||||||||||||| |||||||| ||||||||||||| |||||||||||||||||||||||||||  ||||||| |||||||| ||||  ||||||    
T  9119822 accctcctccaatacaatattttagtttcccaaatgaggagagttttatattttgaagaaaaataagccctcaaagtctctccttctaatgtgctatatt 9119921  T
Q  389 tcttcc 394  Q
    ||||||    
T  9119922 tcttcc 9119927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 293 - 403
Target Start/End: Original strand, 52430595 - 52430707
Alignment:
Q  293 tcctccaatacaattttttagttcccc-aaatgaggagggttttatattttgaagaaaaataag-cctccaaagtccctccttctgatgtcttatatttc 390  Q
    |||||||||| |||||||||||| ||| |||||||||| ||||||||||||||||||||||||| |||| ||||||||||||||  ||||| |||||||     
T  52430595 tcctccaatataattttttagtttccctaaatgaggagagttttatattttgaagaaaaataagtcctctaaagtccctccttccaatgtcctatatttt 52430694  T
Q  391 ttccacttactcc 403  Q
    |||||||||||||    
T  52430695 ttccacttactcc 52430707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 289 - 354
Target Start/End: Complemental strand, 42650681 - 42650615
Alignment:
Q  289 accctcctccaatacaattttttagttcccc-aaatgaggagggttttatattttgaagaaaaataa 354  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  42650681 accctcctccaatacaattttttagttcccccaaatgaggagggttttatattttgaagaaaaataa 42650615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 291 - 357
Target Start/End: Complemental strand, 47063735 - 47063669
Alignment:
Q  291 cctcctccaatacaattttttagttccccaaatgaggagggttttatattttgaagaaaaataagcc 357  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  47063735 cctcttccaatacaattttttagttccccaaatgaggagggttttatattttaaagaaaaataagcc 47063669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 289 - 403
Target Start/End: Original strand, 13985000 - 13985116
Alignment:
Q  289 accctcctccaatacaattttttagttcccc-aaatgaggagggttttatattttgaagaaaaataag-cctccaaagtccctccttctgatgtcttata 386  Q
    ||||||||||||||||||||||||||||| | |||||| |||||||||||||||| |||||||||||| |||||||||| |||||| |  ||||| | ||    
T  13985000 accctcctccaatacaattttttagttccactaaatgaagagggttttatattttaaagaaaaataagccctccaaagttcctcctcccaatgtcctcta 13985099  T
Q  387 tttcttccacttactcc 403  Q
    ||| || ||||||||||    
T  13985100 tttatttcacttactcc 13985116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 305 - 403
Target Start/End: Complemental strand, 48620308 - 48620208
Alignment:
Q  305 attttttagttccccaa-atgaggagggttttatattttgaagaaaaataag-cctccaaagtccctccttctgatgtcttatatttcttccacttactc 402  Q
    ||||||||||||||| | ||||||||||||||||||||||||| |||||||| || |||||| |||||||||  ||||| | ||||||||||||||||||    
T  48620308 attttttagttcccccagatgaggagggttttatattttgaagtaaaataagccccccaaagcccctccttccaatgtcctctatttcttccacttactc 48620209  T
Q  403 c 403  Q
    |    
T  48620208 c 48620208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 299 - 389
Target Start/End: Complemental strand, 21443057 - 21442967
Alignment:
Q  299 aatacaattttttagttccccaaatgaggagggttttatattttgaagaaaaataagcctccaaagtccctccttctgatgtcttatattt 389  Q
    |||| |||||||||||||| ||||||||||||||||||||||||||||||||||||| | |||||   |||||| || ||||| |||||||    
T  21443057 aatataattttttagttcctcaaatgaggagggttttatattttgaagaaaaataagtcaccaaaactcctcctcctaatgtcctatattt 21442967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 291 - 357
Target Start/End: Original strand, 55813664 - 55813730
Alignment:
Q  291 cctcctccaatacaattttttagttccccaaatgaggagggttttatattttgaagaaaaataagcc 357  Q
    |||| |||||||||||||||||||| |||||||||||| | ||||||||||||||||||||||||||    
T  55813664 cctcttccaatacaattttttagtttcccaaatgaggaagattttatattttgaagaaaaataagcc 55813730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 299 - 354
Target Start/End: Original strand, 46669991 - 46670047
Alignment:
Q  299 aatacaattttttagttccc-caaatgaggagggttttatattttgaagaaaaataa 354  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  46669991 aatacaattttttagttccctcaaatgaggagggttttatattttgaagaaaaataa 46670047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 289 - 355
Target Start/End: Original strand, 4442015 - 4442082
Alignment:
Q  289 accctcctccaatacaattttttagttccc-caaatgaggagggttttatattttgaagaaaaataag 355  Q
    |||||| |||||||||||||| ||| |||| |||||||||||||||||||||||||||||||||||||    
T  4442015 accctcttccaatacaattttgtagctccctcaaatgaggagggttttatattttgaagaaaaataag 4442082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 289 - 403
Target Start/End: Original strand, 3075799 - 3075913
Alignment:
Q  289 accctcctccaatacaattttttagttccccaaatgaggagggttttatattttgaagaaaaataagcctccaaagtccctccttctgatgtcttatatt 388  Q
    ||||||||||||||  ||||||||||| | ||||||| ||||||||||||| ||||||||||||||| | ||||||   ||| |||  ||||| | ||||    
T  3075799 accctcctccaatattattttttagtttcgcaaatgaagagggttttatatcttgaagaaaaataagtccccaaagcttctcattccaatgtcctctatt 3075898  T
Q  389 tcttccacttactcc 403  Q
    | |||||||||||||    
T  3075899 tattccacttactcc 3075913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 289 - 350
Target Start/End: Original strand, 12708870 - 12708932
Alignment:
Q  289 accctcctccaatacaattttttagttcc-ccaaatgaggagggttttatattttgaagaaaa 350  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||| |||| |||||||||    
T  12708870 accctcctccaatacaattttttagttcctccaaatgaggagggttttgtattatgaagaaaa 12708932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 289 - 350
Target Start/End: Original strand, 29114269 - 29114331
Alignment:
Q  289 accctcctccaatacaattttttagttcc-ccaaatgaggagggttttatattttgaagaaaa 350  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||| |||| |||||||||    
T  29114269 accctcctccaatacaattttttagttcctccaaatgaggagggttttgtattatgaagaaaa 29114331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 289 - 350
Target Start/End: Original strand, 30198807 - 30198869
Alignment:
Q  289 accctcctccaatacaattttttagttcc-ccaaatgaggagggttttatattttgaagaaaa 350  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||| |||| |||||||||    
T  30198807 accctcctccaatacaattttttagttcctccaaatgaggagggttttgtattatgaagaaaa 30198869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 306 - 354
Target Start/End: Original strand, 29576188 - 29576236
Alignment:
Q  306 ttttttagttccccaaatgaggagggttttatattttgaagaaaaataa 354  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  29576188 ttttttagttccccaaatgaggagcgttttatattttgaagaaaaataa 29576236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 289 - 364
Target Start/End: Original strand, 49668140 - 49668216
Alignment:
Q  289 accctcctccaatacaattttttagttccc-caaatgaggagggttttatattttgaagaaaaataagcctccaaag 364  Q
    ||||||||||||||||||||||||||||||  ||||||||||||||| ||||| ||||||||| | | |||||||||    
T  49668140 accctcctccaatacaattttttagttcccttaaatgaggagggtttaatattatgaagaaaagttaacctccaaag 49668216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 294 - 355
Target Start/End: Complemental strand, 30307413 - 30307351
Alignment:
Q  294 cctccaatacaattttttagttcccc-aaatgaggagggttttatattttgaagaaaaataag 355  Q
    |||| ||||||||||||||||||||| ||||||||||| ||||||||||||||||||| ||||    
T  30307413 cctcaaatacaattttttagttcccccaaatgaggaggattttatattttgaagaaaagtaag 30307351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 290 - 350
Target Start/End: Complemental strand, 16318661 - 16318600
Alignment:
Q  290 ccctcctccaatacaattttttagttcc-ccaaatgaggagggttttatattttgaagaaaa 350  Q
    |||||||||||||||||||||||||||| |||||||||||||||||| || | |||||||||    
T  16318661 ccctcctccaatacaattttttagttcctccaaatgaggagggttttgtaatatgaagaaaa 16318600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 293 - 357
Target Start/End: Original strand, 18319712 - 18319777
Alignment:
Q  293 tcctccaatacaattttttagttccc-caaatgaggagggttttatattttgaagaaaaataagcc 357  Q
    |||||||||||| ||||||||||||  |||||| ||||||||||||||||||||||||||| ||||    
T  18319712 tcctccaatacagttttttagttccatcaaatggggagggttttatattttgaagaaaaatgagcc 18319777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 293 - 357
Target Start/End: Complemental strand, 18398969 - 18398904
Alignment:
Q  293 tcctccaatacaattttttagttccc-caaatgaggagggttttatattttgaagaaaaataagcc 357  Q
    |||||||||||| ||||||||||||  |||||| ||||||||||||||||||||||||||| ||||    
T  18398969 tcctccaatacagttttttagttccatcaaatggggagggttttatattttgaagaaaaatgagcc 18398904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 292 - 352
Target Start/End: Complemental strand, 35959238 - 35959177
Alignment:
Q  292 ctcctccaatacaattttttagttcccc-aaatgaggagggttttatattttgaagaaaaat 352  Q
    |||||||||||||| ||||||||||||| |||||||||||||||| |||| |||||||||||    
T  35959238 ctcctccaatacaactttttagttcccccaaatgaggagggttttgtattatgaagaaaaat 35959177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 289 - 352
Target Start/End: Complemental strand, 18396254 - 18396190
Alignment:
Q  289 accctcctccaatacaattttttagttccc-caaatgaggagggttttatattttgaagaaaaat 352  Q
    |||||||||||||||  ||||||||||||  |||||| |||||||||||||||||||||||||||    
T  18396254 accctcctccaatactgttttttagttccatcaaatggggagggttttatattttgaagaaaaat 18396190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 289 - 403
Target Start/End: Complemental strand, 38366073 - 38365957
Alignment:
Q  289 accctcctccaatacaattttttagttccccaaatgaggagggttttatattttga-agaaaaataagcctccaaagtcc-ctccttctgatgtcttata 386  Q
    ||||||| |||||||||||||| |||||||||||||||  || |||| |||| |||   |||||| | |||||||||||| |||||||  ||||||| ||    
T  38366073 accctcccccaatacaatttttgagttccccaaatgagagggattttttattatgagtaaaaaattaacctccaaagtcctctccttccaatgtcttcta 38365974  T
Q  387 tttcttccacttactcc 403  Q
    |||||||||||| ||||    
T  38365973 tttcttccacttgctcc 38365957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 289 - 357
Target Start/End: Complemental strand, 45899439 - 45899372
Alignment:
Q  289 accctcctccaatacaattttttagttccccaaatgaggagggttttatattttgaagaaaaataagcc 357  Q
    ||||||||||||||||||||||||||||||||||| ||| || |||| |||| ||||||||| ||||||    
T  45899439 accctcctccaatacaattttttagttccccaaattagg-ggattttgtattatgaagaaaactaagcc 45899372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 289 - 352
Target Start/End: Original strand, 46176963 - 46177027
Alignment:
Q  289 accctcctccaatacaattttttagttcc-ccaaatgaggagggttttatattttgaagaaaaat 352  Q
    ||||||||||||||||| ||||||||||| |||||||||||||||||| |||| | |||||||||    
T  46176963 accctcctccaatacaactttttagttcctccaaatgaggagggttttgtattattaagaaaaat 46177027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 306 - 399
Target Start/End: Original strand, 23902483 - 23902577
Alignment:
Q  306 ttttttagttccc-caaatgaggagggttttatattttgaagaaaaataagcctccaaagtccctccttctgatgtcttatatttcttccactta 399  Q
    |||||||||| || |||||||||||||||| ||||||||||||||||||| |  | |||| ||||||| || ||||| || |||||| |||||||    
T  23902483 ttttttagtttcctcaaatgaggagggtttcatattttgaagaaaaataaactcctaaagcccctcctcctaatgtcctacatttctaccactta 23902577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 291 - 401
Target Start/End: Complemental strand, 27143221 - 27143108
Alignment:
Q  291 cctcctccaatacaattttttagt--tccccaaatgaggagggttttatattttgaagaaaaat-aagcctccaaagtccctccttctgatgtcttatat 387  Q
    |||| |||||||||||||||||||  ||| ||||||| ||| |||||||||| | ||||||||| || || ||||| ||||||||||  ||||| | |||    
T  27143221 cctcatccaatacaattttttagttctccacaaatgaagagagttttatattataaagaaaaataaaccccccaaaatccctccttccaatgtcatctat 27143122  T
Q  388 ttcttccacttact 401  Q
    |||||||| |||||    
T  27143121 ttcttccatttact 27143108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 289 - 350
Target Start/End: Original strand, 28175500 - 28175562
Alignment:
Q  289 accctcctccaatacaattttttagttcc-ccaaatgaggagggttttatattttgaagaaaa 350  Q
    |||||||||| |||||||||||||||||| ||||||||||||| |||| |||| |||||||||    
T  28175500 accctcctcctatacaattttttagttcctccaaatgaggaggattttgtattatgaagaaaa 28175562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 289 - 350
Target Start/End: Original strand, 38136870 - 38136932
Alignment:
Q  289 accctcctccaatacaattttttagttcc-ccaaatgaggagggttttatattttgaagaaaa 350  Q
    ||||||||||||||||||||||||||||| ||||||||| |||||||| |||| |||| ||||    
T  38136870 accctcctccaatacaattttttagttcctccaaatgagaagggttttgtattatgaaaaaaa 38136932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 289 - 333
Target Start/End: Original strand, 15498830 - 15498874
Alignment:
Q  289 accctcctccaatacaattttttagttccccaaatgaggagggtt 333  Q
    |||||| ||||||||||||||| ||||||||||||||||||||||    
T  15498830 accctcatccaatacaatttttgagttccccaaatgaggagggtt 15498874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 308 - 352
Target Start/End: Complemental strand, 52636786 - 52636742
Alignment:
Q  308 ttttagttccccaaatgaggagggttttatattttgaagaaaaat 352  Q
    ||||||||| ||||||||||||||||||||||| |||||||||||    
T  52636786 ttttagttctccaaatgaggagggttttatattatgaagaaaaat 52636742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 291 - 350
Target Start/End: Complemental strand, 51974370 - 51974311
Alignment:
Q  291 cctcctccaatacaattttttagttccccaaatgaggagggttttatattttgaagaaaa 350  Q
    |||||| ||||||||||| |||||||||||||||| |||| |||| |||| |||||||||    
T  51974370 cctccttcaatacaatttgttagttccccaaatgaagaggattttgtattatgaagaaaa 51974311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 298 - 356
Target Start/End: Complemental strand, 28880037 - 28879979
Alignment:
Q  298 caatacaattttttagttccccaaatgaggagggttttatattttgaagaaaaataagc 356  Q
    ||||||||| ||||||||   || |||||||| ||||||||||||||||||||||||||    
T  28880037 caatacaatattttagttattcatatgaggagagttttatattttgaagaaaaataagc 28879979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 289 - 350
Target Start/End: Complemental strand, 45823600 - 45823538
Alignment:
Q  289 accctcctccaatacaattttttagtt-ccccaaatgaggagggttttatattttgaagaaaa 350  Q
    |||||||| ||||||||||||| |||| |||||||||||||| ||||| |||| |||||||||    
T  45823600 accctccttcaatacaatttttaagtttccccaaatgaggagagttttgtattatgaagaaaa 45823538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 296 - 352
Target Start/End: Complemental strand, 21081388 - 21081331
Alignment:
Q  296 tccaatacaattttttagtt-ccccaaatgaggagggttttatattttgaagaaaaat 352  Q
    ||||||||||||||| |||| |||||||||||||||||||| | || |||||||||||    
T  21081388 tccaatacaatttttaagttaccccaaatgaggagggttttgttttatgaagaaaaat 21081331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 289 - 403
Target Start/End: Complemental strand, 31530064 - 31529947
Alignment:
Q  289 accctcctccaatacaattttttagtt-ccccaaatgaggagggttttatattttga-agaaaaataagcctccaaagtcc-ctccttctgatgtcttat 385  Q
    ||||||| |||||||||||||| |||| ||||||||||||||| |||| |||| |||   |||||| | ||||||||  || ||||| | |||||||| |    
T  31530064 accctcccccaatacaatttttgagttcccccaaatgaggaggattttttattatgagtaaaaaattaacctccaaaaccctctcctcccgatgtcttct 31529965  T
Q  386 atttcttccacttactcc 403  Q
    ||||||||||||| ||||    
T  31529964 atttcttccacttgctcc 31529947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 289 - 403
Target Start/End: Original strand, 38317265 - 38317382
Alignment:
Q  289 accctcctccaatacaattttttagtt-ccccaaatgaggagggttttatattttga-agaaaaataagcctccaaagtcc-ctccttctgatgtcttat 385  Q
    ||||||| |||||||||||||| |||| ||||||||||||||| |||| |||| |||   |||||| | ||||||||| || ||||| |  ||||||| |    
T  38317265 accctcccccaatacaatttttgagttcccccaaatgaggaggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttct 38317364  T
Q  386 atttcttccacttactcc 403  Q
    ||||||||||||| ||||    
T  38317365 atttcttccacttgctcc 38317382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 294 - 350
Target Start/End: Complemental strand, 49936555 - 49936498
Alignment:
Q  294 cctccaatacaattttttagtt-ccccaaatgaggagggttttatattttgaagaaaa 350  Q
    |||||||||||||||||||||| |||||||| |||||| |||| |||| |||||||||    
T  49936555 cctccaatacaattttttagttcccccaaattaggaggattttgtattatgaagaaaa 49936498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 291 - 350
Target Start/End: Complemental strand, 45971603 - 45971544
Alignment:
Q  291 cctcctccaatacaattttttagtt-ccccaaatgaggagggttttatattttgaagaaaa 350  Q
    ||||||||||||||||||||||||| |||||||||||| ||||||  |||| |||||||||    
T  45971603 cctcctccaatacaattttttagttcccccaaatgagg-gggtttagtattatgaagaaaa 45971544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 291 - 350
Target Start/End: Original strand, 8828236 - 8828295
Alignment:
Q  291 cctcctccaatacaattttttagttccccaaatgaggagggttttatattttgaagaaaa 350  Q
    ||||||||| || ||||||| |||||| ||||||||||| ||||| |||| |||||||||    
T  8828236 cctcctccattataatttttcagttcctcaaatgaggagagttttgtattatgaagaaaa 8828295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 289 - 339
Target Start/End: Complemental strand, 42954653 - 42954602
Alignment:
Q  289 accctcctccaatacaattttttagtt-ccccaaatgaggagggttttatat 339  Q
    |||||||||||||| ||||||||||||  | |||||||||||||||||||||    
T  42954653 accctcctccaatataattttttagttatctcaaatgaggagggttttatat 42954602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 293 - 352
Target Start/End: Complemental strand, 44076644 - 44076585
Alignment:
Q  293 tcctccaatacaattttttagttccccaaatgaggagggttttatattttgaagaaaaat 352  Q
    ||||| |||||||||||||||||||| || |||| || ||||| |||| |||||||||||    
T  44076644 tcctcaaatacaattttttagttccctaagtgagaagagttttgtattatgaagaaaaat 44076585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 296 - 363
Target Start/End: Original strand, 54723940 - 54724007
Alignment:
Q  296 tccaatacaattttttagttccccaaatgaggagggttttatattttgaagaaaaataagcctccaaa 363  Q
    ||||||| ||||||||| || | |||||||| ||| |||| |||| ||||||||||||| ||||||||    
T  54723940 tccaatataattttttaatttctcaaatgagtaggattttgtattatgaagaaaaataaacctccaaa 54724007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 289 - 319
Target Start/End: Complemental strand, 48620342 - 48620312
Alignment:
Q  289 accctcctccaatacaattttttagttcccc 319  Q
    |||||||||||||||||||||||||||||||    
T  48620342 accctcctccaatacaattttttagttcccc 48620312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 299 - 348
Target Start/End: Original strand, 8827866 - 8827915
Alignment:
Q  299 aatacaattttttagttccccaaatgaggagggttttatattttgaagaa 348  Q
    ||||||| ||||||||| ||||||||||||| ||||| |||| |||||||    
T  8827866 aatacaactttttagtttcccaaatgaggagagttttgtattatgaagaa 8827915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 289 - 403
Target Start/End: Original strand, 37756749 - 37756866
Alignment:
Q  289 accctcctccaatacaattttttagtt-ccccaaatgaggagggttttatattttga-agaaaaataagcctccaaagtcc-ctccttctgatgtcttat 385  Q
    |||||||||||| ||||||||| |||| |||||||||||| || |||| |||| |||   |||||| | ||||||||| || ||||| |  ||||||| |    
T  37756749 accctcctccaacacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttct 37756848  T
Q  386 atttcttccacttactcc 403  Q
    ||||||||||||| ||||    
T  37756849 atttcttccacttgctcc 37756866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 69; Significance: 2e-30; HSPs: 46)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 289 - 403
Target Start/End: Original strand, 49102988 - 49103104
Alignment:
Q  289 accctcctccaatacaattttttagttcccc-aaatgaggagggttttatattttgaagaaaaat-aagcctccaaagtccctccttctgatgtcttata 386  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||| || ||||||||| ||||||| |  ||||| | ||    
T  49102988 accctcctccaatacaattttttagttcccccaaatgaggagggttttatgttttgaagaaaaataaaccctccaaagcccctcctcccaatgtcctcta 49103087  T
Q  387 tttcttccacttactcc 403  Q
    |||||||||||||||||    
T  49103088 tttcttccacttactcc 49103104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 289 - 403
Target Start/End: Complemental strand, 17556712 - 17556596
Alignment:
Q  289 accctcctccaatacaattttttagttcccc-aaatgaggagggttttatattttgaagaaaaataag-cctccaaagtccctccttctgatgtcttata 386  Q
    |||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||| || |||||| | ||||| |  ||||| | ||    
T  17556712 accctcctccaatagaattttttagttcccccaaatgaggagggttttatattttgaagaaaaataagccccccaaagcctctcctcccaatgtcctcta 17556613  T
Q  387 tttcttccacttactcc 403  Q
    |||||||||||||||||    
T  17556612 tttcttccacttactcc 17556596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 289 - 403
Target Start/End: Original strand, 35619540 - 35619656
Alignment:
Q  289 accctcctccaatacaattttttagttccc-caaatgaggagggttttatattttgaagaaaaataagcct-ccaaagtccctccttctgatgtcttata 386  Q
    |||||| ||||||||||||||||||||||| || ||||  || |||||||||||||||||||||||||||| |||||| |||||||||  || || | ||    
T  35619540 accctcatccaatacaattttttagttccctcagatgattagagttttatattttgaagaaaaataagcctcccaaagcccctccttccaatatcattta 35619639  T
Q  387 tttcttccacttactcc 403  Q
    |||||| ||||||||||    
T  35619640 tttctttcacttactcc 35619656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 292 - 357
Target Start/End: Original strand, 12625863 - 12625928
Alignment:
Q  292 ctcctccaatacaattttttagttccccaaatgaggagggttttatattttgaagaaaaataagcc 357  Q
    |||||||||||||| |||||||||| ||||||||||||  ||||||||||||||||||||||||||    
T  12625863 ctcctccaatacaagtttttagttctccaaatgaggagatttttatattttgaagaaaaataagcc 12625928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 289 - 357
Target Start/End: Original strand, 24436968 - 24437037
Alignment:
Q  289 accctcctccaatacaattttttagttcccc-aaatgaggagggttttatattttgaagaaaaataagcc 357  Q
    ||||||||| ||||||||||||||  ||||| ||||||||||||||||||||||||||||||||||||||    
T  24436968 accctcctctaatacaattttttaactcccccaaatgaggagggttttatattttgaagaaaaataagcc 24437037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 289 - 350
Target Start/End: Original strand, 25561353 - 25561414
Alignment:
Q  289 accctcctccaatacaattttttagttccccaaatgaggagggttttatattttgaagaaaa 350  Q
    |||||||||||||| |||||||||||||||||||||| || |||||||||||||||||||||    
T  25561353 accctcctccaatataattttttagttccccaaatgacgatggttttatattttgaagaaaa 25561414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 300 - 392
Target Start/End: Original strand, 34552134 - 34552227
Alignment:
Q  300 atacaattttttagttccccaaatgaggagggttttatattttgaagaaaaataagcctccaaag-tccctccttctgatgtcttatatttctt 392  Q
    |||||||||||||||||| |||||||||||||||||||||||| ||||||||||| || |||||| || ||||| || ||||| | ||||||||    
T  34552134 atacaattttttagttcctcaaatgaggagggttttatattttaaagaaaaataaacccccaaagctctctcctcctaatgtcctttatttctt 34552227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 294 - 401
Target Start/End: Original strand, 43036354 - 43036462
Alignment:
Q  294 cctccaatacaattttttagttc-cccaaatgaggagggttttatattttgaagaaaaa-taagcctccaaagtccctccttctgatgtcttatatttct 391  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||| ||| || |||||| ||||||| |  ||||  | |||||||    
T  43036354 cctccaatacaattttttagttctcccaaatgaggagggttttata-tttgaagaaaaattaaccccccaaagcccctcctcccaatgtactctatttct 43036452  T
Q  392 tccacttact 401  Q
    ||||||||||    
T  43036453 tccacttact 43036462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 289 - 352
Target Start/End: Original strand, 41432802 - 41432865
Alignment:
Q  289 accctcctccaatacaattttttagttccccaaatgaggagggttttatattttgaagaaaaat 352  Q
    ||||||||||||||||| |||| ||| ||||||||||||||||||||||||| |||||||||||    
T  41432802 accctcctccaatacaaattttgagtcccccaaatgaggagggttttatattatgaagaaaaat 41432865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 291 - 354
Target Start/End: Complemental strand, 42806214 - 42806151
Alignment:
Q  291 cctcctccaatacaattttttagttccccaaatgaggagggttttatattttgaagaaaaataa 354  Q
    |||| ||||||||||||||||||| ||| ||||||| |||||||||||||||||||||||||||    
T  42806214 cctcttccaatacaattttttagtccccaaaatgagaagggttttatattttgaagaaaaataa 42806151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 289 - 350
Target Start/End: Complemental strand, 5584550 - 5584488
Alignment:
Q  289 accctcctccaatacaattttttagttcc-ccaaatgaggagggttttatattttgaagaaaa 350  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||| |||| |||||||||    
T  5584550 accctcctccaatacaattttttagttcctccaaatgaggagggttttgtattatgaagaaaa 5584488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 299 - 357
Target Start/End: Complemental strand, 50084159 - 50084102
Alignment:
Q  299 aatacaattttttagttccccaaatgaggagggttttatattttgaagaaaaataagcc 357  Q
    ||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||    
T  50084159 aatacaattttttagttccccaaatgacgagggttttatatttt-aagaaaaataagcc 50084102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 292 - 363
Target Start/End: Complemental strand, 46001608 - 46001536
Alignment:
Q  292 ctcctccaatacaattttttagttcc-ccaaatgaggagggttttatattttgaagaaaaataagcctccaaa 363  Q
    |||||| ||||||||||||||||||| ||||||||||||||||||||||| ||||||||| | | ||||||||    
T  46001608 ctcctcaaatacaattttttagttcctccaaatgaggagggttttatattatgaagaaaagttaacctccaaa 46001536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 292 - 350
Target Start/End: Complemental strand, 29092128 - 29092069
Alignment:
Q  292 ctcctccaatacaattttttagttcc-ccaaatgaggagggttttatattttgaagaaaa 350  Q
    |||||||||||||||||||||||||| |||||||||||||||||| |||| |||||||||    
T  29092128 ctcctccaatacaattttttagttcctccaaatgaggagggttttgtattatgaagaaaa 29092069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 292 - 350
Target Start/End: Complemental strand, 36269785 - 36269726
Alignment:
Q  292 ctcctccaatacaattttttagtt-ccccaaatgaggagggttttatattttgaagaaaa 350  Q
    |||||||||||||||||||||||| |||||||||||||||||||| |||| |||||||||    
T  36269785 ctcctccaatacaattttttagttcccccaaatgaggagggttttgtattatgaagaaaa 36269726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 289 - 367
Target Start/End: Original strand, 41817335 - 41817414
Alignment:
Q  289 accctcctccaatacaattttttagttcc-ccaaatgaggagggttttatattttgaagaaaaataagcctccaaagtcc 367  Q
    ||||||||||||||||||||||||||||| |||||||| ||||||||| |||| ||||||||| | | || |||||||||    
T  41817335 accctcctccaatacaattttttagttcctccaaatgatgagggttttgtattatgaagaaaagttaacccccaaagtcc 41817414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 291 - 354
Target Start/End: Complemental strand, 50097670 - 50097607
Alignment:
Q  291 cctcctccaatacaattttttagttccccaaatgaggagggttttatattttgaagaaaaataa 354  Q
    |||| |||||||||| ||||||||||| ||||| |||| |||||||||||||||||||||||||    
T  50097670 cctcatccaatacaactttttagttcctcaaataaggatggttttatattttgaagaaaaataa 50097607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 289 - 350
Target Start/End: Complemental strand, 2909163 - 2909101
Alignment:
Q  289 accctcctccaatacaattttttagttcc-ccaaatgaggagggttttatattttgaagaaaa 350  Q
    ||||||||||||||||||||||||||||| ||||||||| |||||||| |||| |||||||||    
T  2909163 accctcctccaatacaattttttagttcctccaaatgagtagggttttctattatgaagaaaa 2909101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 289 - 350
Target Start/End: Original strand, 17760511 - 17760573
Alignment:
Q  289 accctcctccaatacaattttttagttcc-ccaaatgaggagggttttatattttgaagaaaa 350  Q
    |||| |||||||||||||||||||||||| |||||||||||||||||| |||| |||||||||    
T  17760511 acccccctccaatacaattttttagttcctccaaatgaggagggttttgtattatgaagaaaa 17760573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 289 - 350
Target Start/End: Original strand, 37649652 - 37649714
Alignment:
Q  289 accctcctccaatacaattttttagttcc-ccaaatgaggagggttttatattttgaagaaaa 350  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||| |||| | |||||||    
T  37649652 accctcctccaatacaattttttagttcctccaaatgaggagggttttgtattataaagaaaa 37649714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 289 - 350
Target Start/End: Original strand, 52068173 - 52068235
Alignment:
Q  289 accctcctccaatacaattttttagttcc-ccaaatgaggagggttttatattttgaagaaaa 350  Q
    ||||||||||||||||||||||||||||| |||||||||||| ||||| |||| |||||||||    
T  52068173 accctcctccaatacaattttttagttcctccaaatgaggagagttttgtattatgaagaaaa 52068235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 292 - 395
Target Start/End: Complemental strand, 10618855 - 10618751
Alignment:
Q  292 ctcctccaatacaattttttagttccccaaatgaggagggttttatattttgaagaaaaa-taagcctccaaagtccctccttctgatgtcttatatttc 390  Q
    |||||||| ||||||||||||||||||   |||||||| |||||||||||||||||||||  || || |||||| ||||||| || ||||  | ||||||    
T  10618855 ctcctccattacaattttttagttccctccatgaggagagttttatattttgaagaaaaacaaatcccccaaagcccctcctcctaatgttctctatttc 10618756  T
Q  391 ttcca 395  Q
    |||||    
T  10618755 ttcca 10618751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 289 - 352
Target Start/End: Original strand, 28848825 - 28848889
Alignment:
Q  289 accctcctccaatacaattttttagtt-ccccaaatgaggagggttttatattttgaagaaaaat 352  Q
    |||||||||||||||||||||| |||| |||||||||||||||||||| | || |||||||||||    
T  28848825 accctcctccaatacaatttttgagttcccccaaatgaggagggttttgtgttatgaagaaaaat 28848889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 289 - 349
Target Start/End: Complemental strand, 33579279 - 33579219
Alignment:
Q  289 accctcctccaatacaattttttagttccccaaatgaggagggttttatattttgaagaaa 349  Q
    ||||||||||||||||| |||| |||||||||||||||||||||||| |||| | ||||||    
T  33579279 accctcctccaatacaacttttgagttccccaaatgaggagggttttgtattataaagaaa 33579219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 292 - 352
Target Start/End: Complemental strand, 42333686 - 42333626
Alignment:
Q  292 ctcctccaatacaattttttagttccccaaatgaggagggttttatattttgaagaaaaat 352  Q
    |||||||||||||| | |||||||||| |||||||||||||||| |||| |||||||||||    
T  42333686 ctcctccaatacaactctttagttccctaaatgaggagggttttgtattatgaagaaaaat 42333626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 291 - 349
Target Start/End: Complemental strand, 6538001 - 6537943
Alignment:
Q  291 cctcctccaatacaattttttagttccccaaatgaggagggttttatattttgaagaaa 349  Q
    |||||||||||||| ||||||| ||| ||||| |||||| |||||||||||||||||||    
T  6538001 cctcctccaatacatttttttaattctccaaacgaggagagttttatattttgaagaaa 6537943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 289 - 350
Target Start/End: Original strand, 34154364 - 34154426
Alignment:
Q  289 accctcctccaatacaattttttagttcc-ccaaatgaggagggttttatattttgaagaaaa 350  Q
    |||| |||||||||||||||||||||||| ||||||||||| |||||| |||| |||||||||    
T  34154364 acccccctccaatacaattttttagttcctccaaatgaggaaggttttgtattatgaagaaaa 34154426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 297 - 359
Target Start/End: Original strand, 45752268 - 45752329
Alignment:
Q  297 ccaatacaattttttagttccccaaatgaggagggttttatattttgaagaaaaataagcctc 359  Q
    |||||||||||||||||||||||||  ||| ||| |||||||||||||||||||| |||||||    
T  45752268 ccaatacaattttttagttccccaatggagaagg-ttttatattttgaagaaaaacaagcctc 45752329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 289 - 352
Target Start/End: Complemental strand, 7915558 - 7915494
Alignment:
Q  289 accctcctccaatacaattttttagttccccaaa-tgaggagggttttatattttgaagaaaaat 352  Q
    |||||||||||||||||||||| | | ||||||| ||||||||||| |||||| |||||||||||    
T  7915558 accctcctccaatacaatttttgaatcccccaaaatgaggagggttctatattatgaagaaaaat 7915494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 292 - 350
Target Start/End: Complemental strand, 50226082 - 50226023
Alignment:
Q  292 ctcctccaatacaattttttagttc-cccaaatgaggagggttttatattttgaagaaaa 350  Q
    |||||||||||||||||||||||||  ||||||||| ||||||| ||||| |||||||||    
T  50226082 ctcctccaatacaattttttagttcttccaaatgagaagggtttaatattatgaagaaaa 50226023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 289 - 350
Target Start/End: Complemental strand, 36886914 - 36886852
Alignment:
Q  289 accctcctccaatacaattttttagttcccc-aaatgaggagggttttatattttgaagaaaa 350  Q
    ||||||||||||| ||||||||||||||||| |||||||| ||||||  |||| |||||||||    
T  36886914 accctcctccaatgcaattttttagttccccaaaatgaggggggtttagtattatgaagaaaa 36886852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 300 - 350
Target Start/End: Original strand, 51839230 - 51839280
Alignment:
Q  300 atacaattttttagttccccaaatgaggagggttttatattttgaagaaaa 350  Q
    |||||||||||||||||| ||||| |||||| |||| ||||||||||||||    
T  51839230 atacaattttttagttcctcaaattaggaggattttgtattttgaagaaaa 51839280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 292 - 403
Target Start/End: Original strand, 1688256 - 1688369
Alignment:
Q  292 ctcctccaatacaattttttagttccccaaatgaggagggttttatattttga-agaaaaataagcctccaaagtcc-ctccttctgatgtcttatattt 389  Q
    |||| |||||||||||||| |||||||||||||||| || |||| |||| |||   |||||| | ||||||||| || ||||| |  ||||||| |||||    
T  1688256 ctcccccaatacaatttttgagttccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttctattt 1688355  T
Q  390 cttccacttactcc 403  Q
    ||||||||| ||||    
T  1688356 cttccacttgctcc 1688369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 296 - 350
Target Start/End: Original strand, 39886968 - 39887024
Alignment:
Q  296 tccaatacaattttttagttcc--ccaaatgaggagggttttatattttgaagaaaa 350  Q
    ||||||||||||||||||||||  |||||||||||||||||  |||| |||||||||    
T  39886968 tccaatacaattttttagttcccaccaaatgaggagggtttagtattatgaagaaaa 39887024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 333 - 401
Target Start/End: Complemental strand, 49851411 - 49851342
Alignment:
Q  333 tttatattttgaagaaaaataag-cctccaaagtccctccttctgatgtcttatatttcttccacttact 401  Q
    ||||||||||||||||||||||| || |||||||||||||||   || || | |||||||||||||||||    
T  49851411 tttatattttgaagaaaaataagcccaccaaagtccctcctttcaatatcctctatttcttccacttact 49851342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 298 - 350
Target Start/End: Complemental strand, 69769 - 69717
Alignment:
Q  298 caatacaattttttagttccccaaatgaggagggttttatattttgaagaaaa 350  Q
    |||||||||||||||||||| |||| |||||||||||  |||| |||||||||    
T  69769 caatacaattttttagttcctcaaacgaggagggtttagtattatgaagaaaa 69717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 289 - 352
Target Start/End: Original strand, 52073484 - 52073548
Alignment:
Q  289 accctcctccaatacaattttttagttcccc-aaatgaggagggttttatattttgaagaaaaat 352  Q
    ||||||||| | |||||||||| |||||||| ||||||||||||||||  ||| |||||||||||    
T  52073484 accctcctctagtacaatttttgagttcccccaaatgaggagggttttgaattatgaagaaaaat 52073548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 289 - 351
Target Start/End: Complemental strand, 50476583 - 50476520
Alignment:
Q  289 accctcctccaatacaattttttagttccc-caaatgaggagggttttatattttgaagaaaaa 351  Q
    |||||||||||||||||||||| ||||||| ||||||||| || |||| |||| |||| |||||    
T  50476583 accctcctccaatacaatttttgagttccctcaaatgagggggattttgtattatgaataaaaa 50476520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 289 - 350
Target Start/End: Complemental strand, 27255254 - 27255192
Alignment:
Q  289 accctcctccaatacaattttttagttccc-caaatgaggagggttttatattttgaagaaaa 350  Q
    ||||||| || ||||| ||||||||||||  ||||||||||||||||| |||| |||||||||    
T  27255254 accctcccccgatacatttttttagttccttcaaatgaggagggttttgtattatgaagaaaa 27255192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 289 - 350
Target Start/End: Complemental strand, 33324678 - 33324617
Alignment:
Q  289 accctcctccaatacaattttttagttccc-caaatgaggagggttttatattttgaagaaaa 350  Q
    ||||||||| |||||||||||| ||||||| ||||||||||||||||  |||| |||||||||    
T  33324678 accctcctctaatacaattttt-agttccctcaaatgaggagggtttagtattatgaagaaaa 33324617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 291 - 329
Target Start/End: Original strand, 41428032 - 41428070
Alignment:
Q  291 cctcctccaatacaattttttagttccccaaatgaggag 329  Q
    |||||||||||| ||||||| ||||||||||||||||||    
T  41428032 cctcctccaatataatttttgagttccccaaatgaggag 41428070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 289 - 327
Target Start/End: Complemental strand, 45565174 - 45565136
Alignment:
Q  289 accctcctccaatacaattttttagttccccaaatgagg 327  Q
    ||||||| ||||||||||||||||||||| |||||||||    
T  45565174 accctcccccaatacaattttttagttcctcaaatgagg 45565136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 296 - 403
Target Start/End: Original strand, 5883647 - 5883755
Alignment:
Q  296 tccaatacaattttttagttccc-caaatgaggagggttttatattttgaagaaaaataagcctccaaag-tccctccttctgatgtcttatatttcttc 393  Q
    ||||||||||  ||||||||||| ||||| ||||  |  ||||||||||||||||||||| || |||||| || ||||| || ||||||| ||||| ||     
T  5883647 tccaatacaacattttagttccctcaaataaggaacgacttatattttgaagaaaaataaacccccaaagctctctcctcctaatgtcttctattt-ttg 5883745  T
Q  394 cacttactcc 403  Q
    ||||||||||    
T  5883746 cacttactcc 5883755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 300 - 352
Target Start/End: Original strand, 23412000 - 23412053
Alignment:
Q  300 atacaattttttagttcc-ccaaatgaggagggttttatattttgaagaaaaat 352  Q
    |||||||||||||||||| ||||||||||||| ||||  ||| |||||||||||    
T  23412000 atacaattttttagttcctccaaatgaggaggattttgaattatgaagaaaaat 23412053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 289 - 330
Target Start/End: Complemental strand, 32287625 - 32287584
Alignment:
Q  289 accctcctccaatacaattttttagttccccaaatgaggagg 330  Q
    |||||| |||||||||||||||||||||| ||||||| ||||    
T  32287625 accctcatccaatacaattttttagttcctcaaatgaagagg 32287584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 289 - 403
Target Start/End: Complemental strand, 33991586 - 33991469
Alignment:
Q  289 accctcctccaatacaattttttagtt-ccccaaatgaggagggttttatattttga-agaaaaataagcctccaaagtcc-ctccttctgatgtcttat 385  Q
    ||||||| |||||||||||||| |||| |||||||||||| || |||| |||| |||   |||||| | ||||||||| || ||||| |  ||||||| |    
T  33991586 accctcccccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttct 33991487  T
Q  386 atttcttccacttactcc 403  Q
    ||||||||||||| ||||    
T  33991486 atttcttccacttgctcc 33991469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 67; Significance: 2e-29; HSPs: 48)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 291 - 403
Target Start/End: Complemental strand, 15803231 - 15803117
Alignment:
Q  291 cctcctccaatacaattttttagttccccaaa-tgaggagggttttatattttgaagaaaaataag-cctccaaagtccctccttctgatgtcttatatt 388  Q
    ||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||| ||||||||| |||||||||  ||||| |  |||    
T  15803231 cctcctccaatacaattttttagttcccccaactgaggagggttttatattttgaagaaaaataagccctccaaagcccctccttccaatgtcctccatt 15803132  T
Q  389 tcttccacttactcc 403  Q
    |||||||||| ||||    
T  15803131 tcttccacttgctcc 15803117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 291 - 374
Target Start/End: Original strand, 31584804 - 31584888
Alignment:
Q  291 cctcctccaatacaattttttagttccccaaatgaggagggttttatattttgaagaaaaataagcctc-caaagtccctccttc 374  Q
    |||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||| ||||    
T  31584804 cctccttcaatataattttttagttccccaaatgaggagggttttatattttgaagaaaaataagcccctcaaagtcccttcttc 31584888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 289 - 357
Target Start/End: Original strand, 11522216 - 11522285
Alignment:
Q  289 accctcctccaatacaattttttagttccccaaatgaggagggttttata-ttttgaagaaaaataagcc 357  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  11522216 accctcctccaatacaactttttagttccccaaatgaggagggttttatatttttgaagaaaaataagcc 11522285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 289 - 403
Target Start/End: Complemental strand, 27987713 - 27987595
Alignment:
Q  289 accctcctccaatacaattttttagttccccaaatgagg----agggttttatattttgaagaaaaataagcctccaaagtccctccttctgatgtctta 384  Q
    ||||| || |||||||||||||||||||| |||| ||||    || ||||||||||||||||||||||||||| |||||| |||||||||  ||||| ||    
T  27987713 acccttctacaatacaattttttagttcctcaaacgagggagaagagttttatattttgaagaaaaataagcccccaaagcccctccttccaatgtccta 27987614  T
Q  385 tatttcttccacttactcc 403  Q
    |||||||| ||||||||||    
T  27987613 tatttctttcacttactcc 27987595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 289 - 403
Target Start/End: Complemental strand, 28074246 - 28074128
Alignment:
Q  289 accctcctccaatacaattttttagttccccaaatgagg----agggttttatattttgaagaaaaataagcctccaaagtccctccttctgatgtctta 384  Q
    ||||| || |||||||||||||||||||| |||| ||||    || ||||||||||||||||||||||||||| |||||| |||||||||  ||||| ||    
T  28074246 acccttctacaatacaattttttagttcctcaaacgagggagaagagttttatattttgaagaaaaataagcccccaaagcccctccttccaatgtccta 28074147  T
Q  385 tatttcttccacttactcc 403  Q
    |||||||| ||||||||||    
T  28074146 tatttctttcacttactcc 28074128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 293 - 401
Target Start/End: Original strand, 44954037 - 44954146
Alignment:
Q  293 tcctccaatacaattttttagttccccaaatgaggagggttttatattttgaagaaaaataagcct-ccaaagtccctccttctgatgtcttatatttct 391  Q
    ||||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||  || |||||| |||||| || | |||| | |||||||    
T  44954037 tcctccaatacaattttttagttcttaaaatgaggagggttttatattttgaagaaaaataaatctcccaaagcccctccgtccggtgtcctctatttct 44954136  T
Q  392 tccacttact 401  Q
    ||||||||||    
T  44954137 tccacttact 44954146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 289 - 403
Target Start/End: Complemental strand, 36870308 - 36870193
Alignment:
Q  289 accctcctccaatacaattttttagttcccc-aaatgaggagggttttatattttgaagaaaaataa-gcctccaaagtccctccttctgatgtcttata 386  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||  || |||||| |||||| ||  ||||| | ||    
T  36870308 accctcctccaatacaattttttagttcccccaaatgaggagggttttctattttgaagaaaaataatcccaccaaagcccctcc-tccaatgtcctcta 36870210  T
Q  387 tttcttccacttactcc 403  Q
    ||||||||||| |||||    
T  36870209 tttcttccactcactcc 36870193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 291 - 374
Target Start/End: Original strand, 9087503 - 9087586
Alignment:
Q  291 cctcctccaatacaattttttagttccccaaatgaggagggttttatattttgaagaaaaataagcctccaaagtccctccttc 374  Q
    |||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||| |||| | |||||| || ||||||    
T  9087503 cctcctccgatacaatttttcagttccccaaatgaggagggttttatattttgaagaaaattaagtccccaaaggccatccttc 9087586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 289 - 363
Target Start/End: Original strand, 30072098 - 30072173
Alignment:
Q  289 accctcctccaatacaattttttagttc-cccaaatgaggagggttttatattttgaagaaaaataag-cctccaaa 363  Q
    |||||||||||||||||||||| ||||| |||||||||||||| |||||||||||||||||||||||| ||||||||    
T  30072098 accctcctccaatacaattttt-agttctcccaaatgaggaggattttatattttgaagaaaaataagtcctccaaa 30072173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 293 - 403
Target Start/End: Original strand, 9087738 - 9087848
Alignment:
Q  293 tcctccaatacaattttttagttccc-caaatgaggagggttttatattttgaagaaaaataagcctccaaagtccctccttctgatgtcttatatttct 391  Q
    |||||| ||||||||||| ||||||| ||||||||||||||||||||||||||| |||| |||| |||||||| || ||||||  || || | |||||||    
T  9087738 tcctccgatacaattttt-agttccctcaaatgaggagggttttatattttgaaaaaaattaagtctccaaagcccatccttccaatatcatctatttct 9087836  T
Q  392 tccacttactcc 403  Q
    | ||||||||||    
T  9087837 ttcacttactcc 9087848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 289 - 350
Target Start/End: Complemental strand, 1364878 - 1364816
Alignment:
Q  289 accctcctccaatacaattttttagttcc-ccaaatgaggagggttttatattttgaagaaaa 350  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||| |||| |||||||||    
T  1364878 accctcctccaatacaattttttagttcctccaaatgaggagggttttgtattatgaagaaaa 1364816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 289 - 350
Target Start/End: Complemental strand, 11515089 - 11515027
Alignment:
Q  289 accctcctccaatacaattttttagttcc-ccaaatgaggagggttttatattttgaagaaaa 350  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||| |||| |||||||||    
T  11515089 accctcctccaatacaattttttagttcctccaaatgaggagggttttgtattatgaagaaaa 11515027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 289 - 350
Target Start/End: Complemental strand, 37194312 - 37194250
Alignment:
Q  289 accctcctccaatacaattttttagttcc-ccaaatgaggagggttttatattttgaagaaaa 350  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||| |||| |||||||||    
T  37194312 accctcctccaatacaattttttagttcctccaaatgaggagggttttgtattatgaagaaaa 37194250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 289 - 349
Target Start/End: Complemental strand, 34757650 - 34757589
Alignment:
Q  289 accctcctccaatacaattttttagttcc-ccaaatgaggagggttttatattttgaagaaa 349  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||| |||| ||||||||    
T  34757650 accctcctccaatacaattttttagttcctccaaatgaggagggttttgtattatgaagaaa 34757589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 291 - 340
Target Start/End: Original strand, 41100143 - 41100192
Alignment:
Q  291 cctcctccaatacaattttttagttccccaaatgaggagggttttatatt 340  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  41100143 cctcctccaatacaattttttagttccccaaatgaggagggttttgtatt 41100192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 292 - 403
Target Start/End: Original strand, 12941837 - 12941953
Alignment:
Q  292 ctcctccaatacaattttttagttcccc-aaatgaggagggttttatattttgaagaaaaataag----cctccaaagtccctccttctgatgtcttata 386  Q
    ||||||||||| |||||| ||||||||| ||||||| ||| ||||||||||||||||||||||||    || |||||| || |||| |  ||||| | ||    
T  12941837 ctcctccaatataattttctagttcccccaaatgagaaggattttatattttgaagaaaaataagcccccccccaaagcccttcctcccaatgtcctcta 12941936  T
Q  387 tttcttccacttactcc 403  Q
    |||||||||||||||||    
T  12941937 tttcttccacttactcc 12941953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 297 - 364
Target Start/End: Original strand, 36574468 - 36574534
Alignment:
Q  297 ccaatacaattttttagttccccaaatgaggagggttttatattttgaagaaaaataagcctccaaag 364  Q
    |||||||||||||||||| |||||| || ||||||||||||| |||||| ||||||||||||||||||    
T  36574468 ccaatacaattttttagt-ccccaagtggggagggttttatactttgaataaaaataagcctccaaag 36574534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 309 - 360
Target Start/End: Complemental strand, 39181102 - 39181051
Alignment:
Q  309 tttagttccccaaatgaggagggttttatattttgaagaaaaataagcctcc 360  Q
    ||||||||| ||||||||||| ||||||||||||||||||||||||||||||    
T  39181102 tttagttcctcaaatgaggagagttttatattttgaagaaaaataagcctcc 39181051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 292 - 350
Target Start/End: Original strand, 43572583 - 43572642
Alignment:
Q  292 ctcctccaatacaattttttagttcc-ccaaatgaggagggttttatattttgaagaaaa 350  Q
    |||||||||||||||||||||||||| |||||||||||||||||| |||| |||||||||    
T  43572583 ctcctccaatacaattttttagttcctccaaatgaggagggttttgtattatgaagaaaa 43572642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 289 - 339
Target Start/End: Complemental strand, 3254680 - 3254630
Alignment:
Q  289 accctcctccaatacaattttttagttccccaaatgaggagggttttatat 339  Q
    |||||| |||||| |||||||||||||||||||||||||||||||||||||    
T  3254680 accctcatccaatgcaattttttagttccccaaatgaggagggttttatat 3254630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 289 - 350
Target Start/End: Complemental strand, 26905849 - 26905787
Alignment:
Q  289 accctcctccaatacaattttttagttcc-ccaaatgaggagggttttatattttgaagaaaa 350  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||| |||  |||||||||    
T  26905849 accctcctccaatacaattttttagttcctccaaatgaggagggttttgtatcatgaagaaaa 26905787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 289 - 350
Target Start/End: Complemental strand, 40212048 - 40211986
Alignment:
Q  289 accctcctccaatacaattttttagttcc-ccaaatgaggagggttttatattttgaagaaaa 350  Q
    |||||| |||||||||||||||||||||| |||||||||||||||||| |||| |||||||||    
T  40212048 accctcatccaatacaattttttagttcctccaaatgaggagggttttgtattatgaagaaaa 40211986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 289 - 364
Target Start/End: Complemental strand, 21834986 - 21834909
Alignment:
Q  289 accctcctccaatacaattttttagttcccc-aaatgaggagggttttatattttgaagaaaaa-taagcctccaaag 364  Q
    ||||||||| ||||||| ||||||||||||| |||||||||| |||||||||| |||||||||| ||| |||||||||    
T  21834986 accctcctctaatacaactttttagttcccctaaatgaggagagttttatattatgaagaaaaattaatcctccaaag 21834909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 295 - 352
Target Start/End: Complemental strand, 39819936 - 39819879
Alignment:
Q  295 ctccaatacaattttttagttccccaaatgaggagggttttatattttgaagaaaaat 352  Q
    |||||||||||||||||||||||||||||||||||| |||| ||||  ||||||||||    
T  39819936 ctccaatacaattttttagttccccaaatgaggaggattttgtattaggaagaaaaat 39819879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 289 - 352
Target Start/End: Complemental strand, 4003473 - 4003409
Alignment:
Q  289 accctcctccaatacaattttttagtt-ccccaaatgaggagggttttatattttgaagaaaaat 352  Q
    |||||||||||||||||||||| |||| |||||||||||||| ||||| |||| |||||||||||    
T  4003473 accctcctccaatacaatttttgagttcccccaaatgaggagagttttgtattatgaagaaaaat 4003409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 291 - 350
Target Start/End: Complemental strand, 30523289 - 30523230
Alignment:
Q  291 cctcctccaatacaattttttagttccccaaatgaggagggttttatattttgaagaaaa 350  Q
    ||||||||||||||||||||||||||||||||| || ||| |||| |||| |||||||||    
T  30523289 cctcctccaatacaattttttagttccccaaattagaaggattttgtattatgaagaaaa 30523230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 293 - 351
Target Start/End: Complemental strand, 567427 - 567369
Alignment:
Q  293 tcctccaatacaattttttagttccccaaatgaggagggttttatattttgaagaaaaa 351  Q
    ||||| |||||||||||| ||||||| |||||||||| |||||||| ||||||||||||    
T  567427 tcctctaatacaatttttgagttccctaaatgaggagagttttataatttgaagaaaaa 567369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 289 - 350
Target Start/End: Original strand, 13018514 - 13018576
Alignment:
Q  289 accctcctccaatacaattttttagttcc-ccaaatgaggagggttttatattttgaagaaaa 350  Q
    ||||||| |||||||| |||||||||||| |||||||||||||||||| |||| |||||||||    
T  13018514 accctcccccaatacatttttttagttcctccaaatgaggagggttttgtattatgaagaaaa 13018576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 295 - 352
Target Start/End: Original strand, 15555388 - 15555446
Alignment:
Q  295 ctccaatacaattttttagttcc-ccaaatgaggagggttttatattttgaagaaaaat 352  Q
    ||||||||||||||||||||||| ||||||||| |||||||| |||| |||||||||||    
T  15555388 ctccaatacaattttttagttcctccaaatgagaagggttttgtattatgaagaaaaat 15555446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 289 - 350
Target Start/End: Complemental strand, 6656165 - 6656101
Alignment:
Q  289 accctcctccaatacaattt--tttagttcc-ccaaatgaggagggttttatattttgaagaaaa 350  Q
    ||||||||||||||||||||  ||||||||| |||||||||||||||||| |||| |||||||||    
T  6656165 accctcctccaatacaatttgttttagttcctccaaatgaggagggttttgtattatgaagaaaa 6656101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 289 - 350
Target Start/End: Original strand, 44656786 - 44656846
Alignment:
Q  289 accctcctccaatacaattttttagttccccaaatgaggagggttttatattttgaagaaaa 350  Q
    ||||||| |||||||| |||| |||||||||||||||||| | |||||||||||||||||||    
T  44656786 accctccaccaatacagtttt-tagttccccaaatgaggatgattttatattttgaagaaaa 44656846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 289 - 352
Target Start/End: Original strand, 16519125 - 16519189
Alignment:
Q  289 accctcctccaatacaattttttagtt-ccccaaatgaggagggttttatattttgaagaaaaat 352  Q
    ||||||||| ||||||| ||||||||| ||||||||||||||| |||| |||| |||||||||||    
T  16519125 accctcctctaatacaactttttagtttccccaaatgaggaggattttgtattatgaagaaaaat 16519189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 289 - 350
Target Start/End: Complemental strand, 21626168 - 21626106
Alignment:
Q  289 accctcctccaatacaattttttagttcccc-aaatgaggagggttttatattttgaagaaaa 350  Q
    ||||| ||||||||||| ||||||||||||| ||||||||| |||||| |||| |||||||||    
T  21626168 acccttctccaatacaactttttagttcccccaaatgaggatggttttgtattatgaagaaaa 21626106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 291 - 334
Target Start/End: Complemental strand, 39205060 - 39205015
Alignment:
Q  291 cctcctccaatacaattttttagtt--ccccaaatgaggagggttt 334  Q
    |||||||||||||||||||||||||  |||||||||||||||||||    
T  39205060 cctcctccaatacaattttttagttccccccaaatgaggagggttt 39205015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 301 - 335
Target Start/End: Complemental strand, 39750184 - 39750150
Alignment:
Q  301 tacaattttttagttccccaaatgaggagggtttt 335  Q
    |||||||||||||||||||||||||||||||||||    
T  39750184 tacaattttttagttccccaaatgaggagggtttt 39750150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 295 - 348
Target Start/End: Original strand, 35550200 - 35550253
Alignment:
Q  295 ctccaatacaattttttagttccccaaatgaggagggttttatattttgaagaa 348  Q
    ||||| ||||| ||||||||||||||||||||||||||||  |||| |||||||    
T  35550200 ctccagtacaactttttagttccccaaatgaggagggtttagtattatgaagaa 35550253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 289 - 352
Target Start/End: Original strand, 26599285 - 26599349
Alignment:
Q  289 accctcctccaatacaattttttagtt-ccccaaatgaggagggttttatattttgaagaaaaat 352  Q
    |||||||||||||||||||| | |||| ||||||||||||||||  || |||| |||||||||||    
T  26599285 accctcctccaatacaatttgtgagttcccccaaatgaggagggaattgtattatgaagaaaaat 26599349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 307 - 354
Target Start/End: Complemental strand, 11949932 - 11949885
Alignment:
Q  307 tttttagttccccaaatgaggagggttttatattttgaagaaaaataa 354  Q
    |||||||||||||||||||| || ||||| |||| |||||||||||||    
T  11949932 tttttagttccccaaatgagaagagttttgtattatgaagaaaaataa 11949885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 294 - 364
Target Start/End: Complemental strand, 37664618 - 37664547
Alignment:
Q  294 cctccaatacaattttttagttcc-ccaaatgaggagggttttatattttgaagaaaaataagcctccaaag 364  Q
    ||||||||||||||||| |||||| |||||| |||  | ||||||||| ||||||||||||| || ||||||    
T  37664618 cctccaatacaatttttaagttcctccaaataagggagattttatattatgaagaaaaataaaccaccaaag 37664547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 301 - 352
Target Start/End: Original strand, 41656691 - 41656742
Alignment:
Q  301 tacaattttttagttccccaaatgaggagggttttatattttgaagaaaaat 352  Q
    |||||||||| |||||||| ||||||||| ||||| |||| |||||||||||    
T  41656691 tacaatttttgagttcccccaatgaggagagttttgtattatgaagaaaaat 41656742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 294 - 364
Target Start/End: Complemental strand, 42644697 - 42644626
Alignment:
Q  294 cctccaatacaattttttagtt-ccccaaatgaggagggttttatattttgaagaaaaataagcctccaaag 364  Q
    |||||||||||||||||||||| |||||||| ||| ||  ||| |||| ||||||||| ||| |||||||||    
T  42644697 cctccaatacaattttttagttcccccaaattagggggaatttgtattatgaagaaaactaaacctccaaag 42644626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 289 - 327
Target Start/End: Original strand, 13765975 - 13766013
Alignment:
Q  289 accctcctccaatacaattttttagttccccaaatgagg 327  Q
    ||||||| |||||||||||||| ||||||||||||||||    
T  13765975 accctcccccaatacaatttttgagttccccaaatgagg 13766013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 296 - 334
Target Start/End: Original strand, 28539469 - 28539507
Alignment:
Q  296 tccaatacaattttttagttccccaaatgaggagggttt 334  Q
    ||||||||||||||||||| |||||||||||||| ||||    
T  28539469 tccaatacaattttttagtcccccaaatgaggagagttt 28539507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 289 - 334
Target Start/End: Complemental strand, 31082860 - 31082814
Alignment:
Q  289 accctcctccaatacaattttttagtt-ccccaaatgaggagggttt 334  Q
    |||||||||||||||||| |||||||| ||||||| |||||||||||    
T  31082860 accctcctccaatacaatattttagttcccccaaacgaggagggttt 31082814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 291 - 352
Target Start/End: Complemental strand, 36030856 - 36030794
Alignment:
Q  291 cctcctccaatacaattttttagttcccc-aaatgaggagggttttatattttgaagaaaaat 352  Q
    ||||||||| |||||||||| |||||||| ||||||||||  |||| |||| |||||||||||    
T  36030856 cctcctccattacaatttttgagttcccccaaatgaggagaattttgtattctgaagaaaaat 36030794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 289 - 327
Target Start/End: Complemental strand, 38293933 - 38293895
Alignment:
Q  289 accctcctccaatacaattttttagttccccaaatgagg 327  Q
    ||||||| |||||||||||||| ||||||||||||||||    
T  38293933 accctcccccaatacaatttttgagttccccaaatgagg 38293895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 291 - 329
Target Start/End: Complemental strand, 39913298 - 39913260
Alignment:
Q  291 cctcctccaatacaattttttagttccccaaatgaggag 329  Q
    |||||||||||| ||||||| ||||||||||||||||||    
T  39913298 cctcctccaatataatttttgagttccccaaatgaggag 39913260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 296 - 352
Target Start/End: Original strand, 5322162 - 5322219
Alignment:
Q  296 tccaatacaattttttagttcccc-aaatgaggagggttttatattttgaagaaaaat 352  Q
    ||||||||| ||||| |||||||| ||||||||||| |||| |||| |||||||||||    
T  5322162 tccaatacagtttttgagttcccccaaatgaggaggattttgtattatgaagaaaaat 5322219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 66; Significance: 9e-29; HSPs: 40)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 289 - 402
Target Start/End: Original strand, 4788038 - 4788150
Alignment:
Q  289 accctcctccaatacaattttttagttccccaaatgaggagggttttatattttgaagaaaaataagcctccaaagtccctccttctgatgtcttatatt 388  Q
    ||||| ||||||||||||||||||||||||||||| |||| | ||||||||| |||||||||||||||| ||||||| ||||||||  ||||| | ||||    
T  4788038 accctactccaatacaattttttagttccccaaataaggatgattttatattatgaagaaaaataagcccccaaagt-cctccttccaatgtcatctatt 4788136  T
Q  389 tcttccacttactc 402  Q
    ||||||||||||||    
T  4788137 tcttccacttactc 4788150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 289 - 349
Target Start/End: Complemental strand, 31055419 - 31055359
Alignment:
Q  289 accctcctccaatacaattttttagttccccaaatgaggagggttttatattttgaagaaa 349  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  31055419 accctcctccaatacaattttttagttccccaaatgaggagggttttatattttaaagaaa 31055359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 289 - 403
Target Start/End: Original strand, 7391446 - 7391560
Alignment:
Q  289 accctcctccaatacaattttttagttccccaaatgaggagggttttatattttgaagaaaaataag-cctccaaagtccctccttctgatgtcttatat 387  Q
    |||||| ||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||| || ||||| ||| ||||    ||||||| |||    
T  7391446 accctcatccaataca-ttttttagttccccaaataaggagggttttatattttgaagaaaaataagccccccaaattccttcctctcaatgtcttctat 7391544  T
Q  388 ttcttccacttactcc 403  Q
    ||||||||| ||||||    
T  7391545 ttcttccacctactcc 7391560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 296 - 398
Target Start/End: Complemental strand, 1277976 - 1277872
Alignment:
Q  296 tccaatacaattttttagttccccaaa-tgaggagggttttatattttgaagaaaaataag-cctccaaagtccctccttctgatgtcttatatttcttc 393  Q
    ||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||| || |||||| ||||||| |  ||||| | ||||| |||    
T  1277976 tccaatacaattttttagttccccaaaatgaggatggttttatattttgaagaaaaataagccccccaaagcccctcctcccaatgtcctctattttttc 1277877  T
Q  394 cactt 398  Q
    |||||    
T  1277876 cactt 1277872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 291 - 354
Target Start/End: Original strand, 30301962 - 30302025
Alignment:
Q  291 cctcctccaatacaattttttagttccccaaatgaggagggttttatattttgaagaaaaataa 354  Q
    ||||||||||||||||||||||||| | ||||||||||| ||||||||||||||||||||||||    
T  30301962 cctcctccaatacaattttttagtttctcaaatgaggagagttttatattttgaagaaaaataa 30302025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 292 - 398
Target Start/End: Original strand, 33187885 - 33187992
Alignment:
Q  292 ctcctccaatacaattttttagttccccaaatgaggagggttttatattttgaagaaaaataag-cctccaaagtccctccttctgatgtcttatatttc 390  Q
    |||||||||||||||||||||||||| |||||||||| | |||||||||||||||||||| ||| || |||||| | |||||||  ||||||| |||||     
T  33187885 ctcctccaatacaattttttagttcctcaaatgaggatgattttatattttgaagaaaaacaagccccccaaagcctctccttccaatgtcttctatttt 33187984  T
Q  391 ttccactt 398  Q
    || |||||    
T  33187985 tttcactt 33187992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 292 - 355
Target Start/End: Original strand, 31180006 - 31180068
Alignment:
Q  292 ctcctccaatacaattttttagttccccaaatgaggagggttttatattttgaagaaaaataag 355  Q
    ||||||||||||||||||||||| || ||||||||||| |||||||||||||||||||||||||    
T  31180006 ctcctccaatacaattttttagt-cctcaaatgaggagagttttatattttgaagaaaaataag 31180068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 294 - 367
Target Start/End: Complemental strand, 19791730 - 19791657
Alignment:
Q  294 cctccaatacaattttttagttccccaaatgaggagggttttatattttgaagaaaaataagcctccaaagtcc 367  Q
    |||||||||||||||||||||||||||||||||| ||||||  |||| ||||||||| | | ||||||||||||    
T  19791730 cctccaatacaattttttagttccccaaatgaggtgggtttagtattatgaagaaaagttaacctccaaagtcc 19791657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 290 - 352
Target Start/End: Original strand, 46611864 - 46611927
Alignment:
Q  290 ccctcctccaatacaattttttagttccc-caaatgaggagggttttatattttgaagaaaaat 352  Q
    ||||| || |||||||||||||||||||| |||||| |||||||||||||||||||||||||||    
T  46611864 ccctcatcaaatacaattttttagttccctcaaatggggagggttttatattttgaagaaaaat 46611927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 289 - 350
Target Start/End: Original strand, 2826283 - 2826345
Alignment:
Q  289 accctcctccaatacaattttttagtt-ccccaaatgaggagggttttatattttgaagaaaa 350  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||  |||| |||||||||    
T  2826283 accctcctccaatacaattttttagttcccccaaatgaggagggtttagtattatgaagaaaa 2826345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 289 - 350
Target Start/End: Original strand, 38505370 - 38505432
Alignment:
Q  289 accctcctccaatacaattttttagtt-ccccaaatgaggagggttttatattttgaagaaaa 350  Q
    ||||||||||||||||||||| ||||| |||||||||||||||||||| |||| |||||||||    
T  38505370 accctcctccaatacaattttatagttcccccaaatgaggagggttttgtattatgaagaaaa 38505432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 290 - 350
Target Start/End: Original strand, 15748986 - 15749047
Alignment:
Q  290 ccctcctccaatacaattttttagttcc-ccaaatgaggagggttttatattttgaagaaaa 350  Q
    ||||| |||||||||||||||||||||| |||||||||||||||||| |||| |||||||||    
T  15748986 ccctcatccaatacaattttttagttcctccaaatgaggagggttttgtattatgaagaaaa 15749047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 291 - 364
Target Start/End: Original strand, 22556739 - 22556812
Alignment:
Q  291 cctcctccaatacaattttttagttccccaaatgaggagggttttatattttgaagaaaaataagcctccaaag 364  Q
    |||||| ||||||||||||   |||||||||||||| || ||||||||||||||||||| ||||||| ||||||    
T  22556739 cctccttcaatacaattttaaggttccccaaatgagaagagttttatattttgaagaaatataagcccccaaag 22556812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 295 - 350
Target Start/End: Original strand, 45940442 - 45940498
Alignment:
Q  295 ctccaatacaattttttagttcc-ccaaatgaggagggttttatattttgaagaaaa 350  Q
    ||||||||||||||||||||||| |||||||||||||||||| |||| |||||||||    
T  45940442 ctccaatacaattttttagttcctccaaatgaggagggttttgtattatgaagaaaa 45940498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 292 - 350
Target Start/End: Original strand, 44487356 - 44487415
Alignment:
Q  292 ctcctccaatacaattttttagttcc-ccaaatgaggagggttttatattttgaagaaaa 350  Q
    |||||||||||||||||||||||||| | ||||||||||  |||||||||||||||||||    
T  44487356 ctcctccaatacaattttttagttcctctaaatgaggagaattttatattttgaagaaaa 44487415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 289 - 350
Target Start/End: Original strand, 16805603 - 16805665
Alignment:
Q  289 accctcctccaatacaattttttagttcc-ccaaatgaggagggttttatattttgaagaaaa 350  Q
    ||||||||||||||||||||||||||||| |||||||| || |||||| |||| |||||||||    
T  16805603 accctcctccaatacaattttttagttcctccaaatgaagaaggttttgtattatgaagaaaa 16805665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 289 - 350
Target Start/End: Complemental strand, 17818351 - 17818289
Alignment:
Q  289 accctcctccaatacaattttttagttcc-ccaaatgaggagggttttatattttgaagaaaa 350  Q
    ||||||||||||||||||||||||||||| | |||||| ||||||||| |||| |||||||||    
T  17818351 accctcctccaatacaattttttagttcctctaaatgatgagggttttgtattctgaagaaaa 17818289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 300 - 357
Target Start/End: Complemental strand, 30081412 - 30081354
Alignment:
Q  300 atacaattttttagttcc-ccaaatgaggagggttttatattttgaagaaaaataagcc 357  Q
    |||||||||||||||||| |||| |||| |||||||| |||||||||||||||||||||    
T  30081412 atacaattttttagttcctccaagtgagaagggttttttattttgaagaaaaataagcc 30081354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 289 - 350
Target Start/End: Original strand, 33872147 - 33872209
Alignment:
Q  289 accctcctccaatacaattttttagtt-ccccaaatgaggagggttttatattttgaagaaaa 350  Q
    |||||||||||||||||||| |||||| |||||||||||||||||||  |||| |||||||||    
T  33872147 accctcctccaatacaatttgttagttcccccaaatgaggagggtttagtattatgaagaaaa 33872209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 289 - 335
Target Start/End: Original strand, 35264908 - 35264954
Alignment:
Q  289 accctcctccaatacaattttttagttccccaaatgaggagggtttt 335  Q
    ||||||||||||||||||||||||||||||||||||| ||| |||||    
T  35264908 accctcctccaatacaattttttagttccccaaatgaagagtgtttt 35264954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 296 - 352
Target Start/End: Complemental strand, 13697320 - 13697263
Alignment:
Q  296 tccaatacaattttttagttcccc-aaatgaggagggttttatattttgaagaaaaat 352  Q
    |||||||||| ||||||||||||| |||||||||||||||| |||| |||||||||||    
T  13697320 tccaatacaactttttagttcccccaaatgaggagggttttgtattatgaagaaaaat 13697263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 297 - 354
Target Start/End: Original strand, 38680058 - 38680115
Alignment:
Q  297 ccaatacaattttttagttccccaaatgaggagggttttatattttgaagaaaaataa 354  Q
    ||||||||||| |||||||||||||||  | || ||||||||||||||||||||||||    
T  38680058 ccaatacaattatttagttccccaaataggaagagttttatattttgaagaaaaataa 38680115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 289 - 349
Target Start/End: Complemental strand, 42254003 - 42253942
Alignment:
Q  289 accctcctccaatacaattttttagttcc-ccaaatgaggagggttttatattttgaagaaa 349  Q
    |||||||| ||||| |||||||||||||| |||||||||||||||||| |||| ||||||||    
T  42254003 accctccttcaatataattttttagttcctccaaatgaggagggttttgtattatgaagaaa 42253942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 289 - 357
Target Start/End: Original strand, 7362683 - 7362751
Alignment:
Q  289 accctcctccaatacaattttttagttccccaaatgaggagggttttatattttgaagaaaaataagcc 357  Q
    ||||||||| ||| || |||||||||| | |||||||| | ||||||||||||||||| ||||||||||    
T  7362683 accctcctctaatccagttttttagtttctcaaatgagaaaggttttatattttgaagtaaaataagcc 7362751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 296 - 352
Target Start/End: Original strand, 42113002 - 42113058
Alignment:
Q  296 tccaatacaattttttagttccccaaatgaggagggttttatattttgaagaaaaat 352  Q
    |||||||||| ||||||||||||||||||||||| ||||  |||| |||||||||||    
T  42113002 tccaatacaactttttagttccccaaatgaggagagtttagtattatgaagaaaaat 42113058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 293 - 352
Target Start/End: Original strand, 24924620 - 24924679
Alignment:
Q  293 tcctccaatacaattttttagttccccaaatgaggagggttttatattttgaagaaaaat 352  Q
    ||||| |||||||||||  |||||| ||||||||||||||||| |||| |||||||||||    
T  24924620 tcctcaaatacaattttcaagttcctcaaatgaggagggttttgtattatgaagaaaaat 24924679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 289 - 350
Target Start/End: Original strand, 4058175 - 4058237
Alignment:
Q  289 accctcctccaatacaattttttagtt-ccccaaatgaggagggttttatattttgaagaaaa 350  Q
    |||||| |||||||||||||||||||| | ||||| |||||||||||| |||| |||||||||    
T  4058175 accctcatccaatacaattttttagttgctccaaacgaggagggttttgtattatgaagaaaa 4058237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 295 - 356
Target Start/End: Original strand, 12624416 - 12624477
Alignment:
Q  295 ctccaatacaattttttagttccccaaatgaggagggttttatattttgaagaaaaataagc 356  Q
    ||||||| ||| ||||||||||||||||| || || ||||| ||||||||||||||| ||||    
T  12624416 ctccaatgcaaatttttagttccccaaataagaagagttttttattttgaagaaaaacaagc 12624477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 317 - 369
Target Start/End: Original strand, 23772604 - 23772657
Alignment:
Q  317 cccaaatgaggagggttttatattttgaagaaaaataagcct-ccaaagtccct 369  Q
    |||||||||||||  |||||||||||||||||||||||| || |||||||||||    
T  23772604 cccaaatgaggagatttttatattttgaagaaaaataagtctcccaaagtccct 23772657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 291 - 335
Target Start/End: Original strand, 32650429 - 32650474
Alignment:
Q  291 cctcctccaatacaattttttagttcc-ccaaatgaggagggtttt 335  Q
    ||||||||||| ||||||||||||||| ||||||||||||||||||    
T  32650429 cctcctccaatgcaattttttagttcctccaaatgaggagggtttt 32650474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 295 - 351
Target Start/End: Complemental strand, 23551696 - 23551640
Alignment:
Q  295 ctccaatacaattttttagttccccaaatgaggagggttttatattttgaagaaaaa 351  Q
    |||||||||||  ||||||||||| |||||||||||| ||| |||| ||||||||||    
T  23551696 ctccaatacaaccttttagttcccaaaatgaggagggctttgtattatgaagaaaaa 23551640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 289 - 352
Target Start/End: Complemental strand, 38137986 - 38137922
Alignment:
Q  289 accctcctccaatacaattttttagttcccc-aaatgaggagggttttatattttgaagaaaaat 352  Q
    ||||||||||||||||| |||| || ||||| ||||||||||| |||| |||| |||||||||||    
T  38137986 accctcctccaatacaaattttgagctcccccaaatgaggaggattttgtattatgaagaaaaat 38137922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 298 - 354
Target Start/End: Complemental strand, 46509312 - 46509257
Alignment:
Q  298 caatacaattttttagttccccaaatgaggagggttttatattttgaagaaaaataa 354  Q
    ||||||||||||||||||  | ||||||||||| ||||||||| |||||||||||||    
T  46509312 caatacaattttttagttttctaaatgaggagg-ttttatattatgaagaaaaataa 46509257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 290 - 352
Target Start/End: Original strand, 17884231 - 17884291
Alignment:
Q  290 ccctcctccaatacaattttttagttccccaaatgaggagggttttatattttgaagaaaaat 352  Q
    |||||||||||||||||||||||||||| ||||| || |  ||||| |||| |||||||||||    
T  17884231 ccctcctccaatacaattttttagttcctcaaataagaa--gttttgtattatgaagaaaaat 17884291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 294 - 352
Target Start/End: Original strand, 23466038 - 23466097
Alignment:
Q  294 cctccaatacaattttttagttccc-caaatgaggagggttttatattttgaagaaaaat 352  Q
    ||||||||||||||| | ||||||| ||||||||||||||||| |||| | |||||||||    
T  23466038 cctccaatacaatttgtgagttccctcaaatgaggagggttttgtattataaagaaaaat 23466097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 300 - 399
Target Start/End: Original strand, 21018741 - 21018843
Alignment:
Q  300 atacaattttttagttcc-ccaaatgaggagggttttatattttgaagaaaaat-aagcctccaaagtcc-ctccttctgatgtcttatatttcttccac 396  Q
    |||||||||||||||||| ||||| ||||||| || | |||| ||||||||||| ||| | ||||||| | | |||| | ||||||| ||||||||||||    
T  21018741 atacaattttttagttcctccaaacgaggaggattctgtattatgaagaaaaatgaagtccccaaagttctccccttttaatgtcttctatttcttccac 21018840  T
Q  397 tta 399  Q
    |||    
T  21018841 tta 21018843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 301 - 350
Target Start/End: Complemental strand, 21687467 - 21687417
Alignment:
Q  301 tacaattttttagttcc-ccaaatgaggagggttttatattttgaagaaaa 350  Q
    ||||||||||||||||| |||||||||||  ||| ||||||||||||||||    
T  21687467 tacaattttttagttcctccaaatgaggaaagttgtatattttgaagaaaa 21687417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 296 - 350
Target Start/End: Complemental strand, 46442746 - 46442692
Alignment:
Q  296 tccaatacaattttttagttccccaaatgaggagggttttatattttgaagaaaa 350  Q
    ||||| |||||||||||| ||||||||||| |||| |||| |||| |||||||||    
T  46442746 tccaaaacaattttttagctccccaaatgatgaggattttgtattatgaagaaaa 46442692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 289 - 403
Target Start/End: Original strand, 3571795 - 3571912
Alignment:
Q  289 accctcctccaatacaattttttagtt-ccccaaatgaggagggttttatattttga-agaaaaataagcctccaaagtcc-ctccttctgatgtcttat 385  Q
    |||||||  ||||||||||||| |||| |||||||||||| || |||| |||| |||   |||||| | |||||||||||| ||| |||  ||||||| |    
T  3571795 accctcccgcaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagtcctctctttccaatgtcttct 3571894  T
Q  386 atttcttccacttactcc 403  Q
    ||||||||||||| ||||    
T  3571895 atttcttccacttgctcc 3571912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 301 - 334
Target Start/End: Original strand, 44858149 - 44858182
Alignment:
Q  301 tacaattttttagttccccaaatgaggagggttt 334  Q
    ||||||||||||||||||| ||||||||||||||    
T  44858149 tacaattttttagttcccccaatgaggagggttt 44858182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 58; Significance: 6e-24; HSPs: 53)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 291 - 360
Target Start/End: Original strand, 3458324 - 3458393
Alignment:
Q  291 cctcctccaatacaattttttagttccccaaatgaggagggttttatattttgaagaaaaataagcctcc 360  Q
    |||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||| ||||    
T  3458324 cctcctccaatacaattttttagttccccaaacgaggacggttttatattttgaagaaaaataagtctcc 3458393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 289 - 355
Target Start/End: Complemental strand, 48444551 - 48444485
Alignment:
Q  289 accctcctccaatacaattttttagttccccaaatgaggagggttttatattttgaagaaaaataag 355  Q
    |||||| |||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||    
T  48444551 accctcatccaatacaattttttagatccccaaatgaggaaggttttatattttgaagaaaaataag 48444485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 289 - 402
Target Start/End: Original strand, 32721097 - 32721210
Alignment:
Q  289 accctcctccaatacaattttttagttccccaaatgaggagggttttatattttgaagaaaaataagcctccaaagtccctccttctgatgtcttatatt 388  Q
    ||||| ||||||| |||||||| |||| ||||||||| ||| ||||||||||||||||||||||||| | ||||||  ||||||||  || | || ||||    
T  32721097 acccttctccaatgcaatttttgagtttcccaaatgaagagagttttatattttgaagaaaaataagtccccaaagctcctccttccaatattttttatt 32721196  T
Q  389 tcttccacttactc 402  Q
    ||||||||||||||    
T  32721197 tcttccacttactc 32721210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 289 - 357
Target Start/End: Complemental strand, 53888532 - 53888463
Alignment:
Q  289 accctcctccaatacaattttttagttcccc-aaatgaggagggttttatattttgaagaaaaataagcc 357  Q
    ||||||||||||||||||||||||||||||| |||  |||||||||||||||||||||||||||||||||    
T  53888532 accctcctccaatacaattttttagttcccccaaacaaggagggttttatattttgaagaaaaataagcc 53888463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 293 - 352
Target Start/End: Complemental strand, 35283128 - 35283068
Alignment:
Q  293 tcctccaatacaattttttagttcccc-aaatgaggagggttttatattttgaagaaaaat 352  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  35283128 tcctccaatacaattttttagttcccccaaatgaggagggttttatattttgaagaaaaat 35283068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 289 - 356
Target Start/End: Original strand, 50345683 - 50345750
Alignment:
Q  289 accctcctccaatacaattttttagttccccaaatgaggagggttttatattttgaagaaaaataagc 356  Q
    |||||| |||||||||||| |||||||||||||| |||||| ||||||||||||||||||||||||||    
T  50345683 accctcatccaatacaattctttagttccccaaacgaggagtgttttatattttgaagaaaaataagc 50345750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 292 - 403
Target Start/End: Complemental strand, 46891428 - 46891315
Alignment:
Q  292 ctcctccaatacaattttttagttcc-ccaaatgaggagggttttatat-tttgaagaaaaataagcctccaaagtccctccttctgatgtcttatattt 389  Q
    |||||| ||||||||||||||||||  ||||| ||  |||||||||||| |||||||||||||||||||||||||  ||||||||  ||||| | |||||    
T  46891428 ctcctctaatacaattttttagttcttccaaacgataagggttttatatatttgaagaaaaataagcctccaaagcacctccttccaatgtcctctattt 46891329  T
Q  390 cttccacttactcc 403  Q
    |||||||| |||||    
T  46891328 cttccactcactcc 46891315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 289 - 350
Target Start/End: Original strand, 33944676 - 33944738
Alignment:
Q  289 accctcctccaatacaattttttagttcc-ccaaatgaggagggttttatattttgaagaaaa 350  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||| |||| |||||||||    
T  33944676 accctcctccaatacaattttttagttcctccaaatgaggagggttttgtattatgaagaaaa 33944738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 289 - 350
Target Start/End: Complemental strand, 38639634 - 38639572
Alignment:
Q  289 accctcctccaatacaattttttagttcc-ccaaatgaggagggttttatattttgaagaaaa 350  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||| |||| |||||||||    
T  38639634 accctcctccaatacaattttttagttcctccaaatgaggagggttttgtattatgaagaaaa 38639572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 291 - 352
Target Start/End: Original strand, 45570981 - 45571043
Alignment:
Q  291 cctcctccaatacaattttttagtt-ccccaaatgaggagggttttatattttgaagaaaaat 352  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| ||||| |||||||||||    
T  45570981 cctcctccaatacaattttttagttcccccaaatgaggagggtttaatattatgaagaaaaat 45571043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 289 - 350
Target Start/End: Original strand, 53664635 - 53664697
Alignment:
Q  289 accctcctccaatacaattttttagttcc-ccaaatgaggagggttttatattttgaagaaaa 350  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||| |||| |||||||||    
T  53664635 accctcctccaatacaattttttagttcctccaaatgaggagggttttgtattatgaagaaaa 53664697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 303 - 360
Target Start/End: Complemental strand, 3354036 - 3353979
Alignment:
Q  303 caattttttagttccccaaatgaggagggttttatattttgaagaaaaataagcctcc 360  Q
    |||||||||| ||||||||| |||||| ||||||||||||||||||||||||||||||    
T  3354036 caattttttaattccccaaacgaggagagttttatattttgaagaaaaataagcctcc 3353979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 289 - 350
Target Start/End: Complemental strand, 51686551 - 51686490
Alignment:
Q  289 accctcctccaatacaattttttagttccccaaatgaggagggttttatattttgaagaaaa 350  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||  |||| |||||||||    
T  51686551 accctcctccaatacaattttttagttccccaaatgaggggggtttagtattatgaagaaaa 51686490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 291 - 350
Target Start/End: Original strand, 25754140 - 25754200
Alignment:
Q  291 cctcctccaatacaattttttagttcc-ccaaatgaggagggttttatattttgaagaaaa 350  Q
    ||||||||||||||||||||||||||| |||||||||||||||||| |||| |||||||||    
T  25754140 cctcctccaatacaattttttagttcctccaaatgaggagggttttgtattatgaagaaaa 25754200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 292 - 350
Target Start/End: Complemental strand, 3537250 - 3537191
Alignment:
Q  292 ctcctccaatacaattttttagtt-ccccaaatgaggagggttttatattttgaagaaaa 350  Q
    |||||||||||||||||||||||| |||||||||||||||||||| |||| |||||||||    
T  3537250 ctcctccaatacaattttttagttcccccaaatgaggagggttttgtattatgaagaaaa 3537191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 289 - 350
Target Start/End: Original strand, 33908985 - 33909047
Alignment:
Q  289 accctcctccaatacaattttttagtt-ccccaaatgaggagggttttatattttgaagaaaa 350  Q
    ||||||||||||||||| ||||||||| |||||||||||||||||||| |||| |||||||||    
T  33908985 accctcctccaatacaactttttagtttccccaaatgaggagggttttgtattatgaagaaaa 33909047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 289 - 350
Target Start/End: Complemental strand, 50948251 - 50948189
Alignment:
Q  289 accctcctccaatacaattttttagttcc-ccaaatgaggagggttttatattttgaagaaaa 350  Q
    ||||||||||||||||||||||||||||| |||| ||||||||||||| |||| |||||||||    
T  50948251 accctcctccaatacaattttttagttcctccaactgaggagggttttgtattatgaagaaaa 50948189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 294 - 363
Target Start/End: Original strand, 7435656 - 7435725
Alignment:
Q  294 cctccaatacaattttttagttccccaaatgaggagggttttatattttgaagaaaaataagcctccaaa 363  Q
    ||||||||||||||||||||||| ||| ||||||||| ||||||||| ||||||||| | |||| |||||    
T  7435656 cctccaatacaattttttagttctccagatgaggaggattttatattatgaagaaaagttagcccccaaa 7435725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 294 - 354
Target Start/End: Complemental strand, 11500144 - 11500083
Alignment:
Q  294 cctccaatacaattttttagttc-cccaaatgaggagggttttatattttgaagaaaaataa 354  Q
    ||||||||||||||||||||||  ||||||||||||||||||| |||| |||||||||||||    
T  11500144 cctccaatacaattttttagttatcccaaatgaggagggttttctattatgaagaaaaataa 11500083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 292 - 348
Target Start/End: Complemental strand, 35989158 - 35989102
Alignment:
Q  292 ctcctccaatacaattttttagttccccaaatgaggagggttttatattttgaagaa 348  Q
    |||||| ||||||||||||||||||||||||| |||||||||| ||||| |||||||    
T  35989158 ctcctctaatacaattttttagttccccaaattaggagggtttaatattatgaagaa 35989102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 289 - 352
Target Start/End: Complemental strand, 29623281 - 29623218
Alignment:
Q  289 accctcctccaatacaattttttagttccccaaatgaggagggttttatattttgaagaaaaat 352  Q
    |||||||| |||||||| |||| |||| ||||||||||||||||||| |||| |||||||||||    
T  29623281 accctcctgcaatacaacttttgagtttcccaaatgaggagggttttgtattatgaagaaaaat 29623218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 297 - 354
Target Start/End: Complemental strand, 27681845 - 27681787
Alignment:
Q  297 ccaatacaattttttagttcc-ccaaatgaggagggttttatattttgaagaaaaataa 354  Q
    ||||||||| ||||||||||| |||||||| |||||||||||||||| |||||||||||    
T  27681845 ccaatacaactttttagttcctccaaatgacgagggttttatatttttaagaaaaataa 27681787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 292 - 352
Target Start/End: Complemental strand, 32858872 - 32858811
Alignment:
Q  292 ctcctccaatacaattttttagttcccc-aaatgaggagggttttatattttgaagaaaaat 352  Q
    |||||| |||||||||||| |||||||| ||||||||||| ||||||||| |||||||||||    
T  32858872 ctcctcgaatacaatttttgagttcccccaaatgaggaggattttatattatgaagaaaaat 32858811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 289 - 350
Target Start/End: Complemental strand, 49183740 - 49183679
Alignment:
Q  289 accctcctccaatacaattttttagttccccaaatgaggagggttttatattttgaagaaaa 350  Q
    ||||||||| |||||||||||||||||| |||||||||||||| ||  |||| |||||||||    
T  49183740 accctcctctaatacaattttttagttctccaaatgaggagggattagtattatgaagaaaa 49183679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 289 - 352
Target Start/End: Original strand, 1132961 - 1133025
Alignment:
Q  289 accctcctccaatacaattttttagttcccc-aaatgaggagggttttatattttgaagaaaaat 352  Q
    |||||||||||||||||||||| |||||||| |||||||||| ||||| |||| ||||| |||||    
T  1132961 accctcctccaatacaatttttgagttccccaaaatgaggagagttttgtattatgaagtaaaat 1133025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 289 - 348
Target Start/End: Complemental strand, 27197297 - 27197237
Alignment:
Q  289 accctcctccaatacaatttttt-agttccccaaatgaggagggttttatattttgaagaa 348  Q
    |||||| |||||||||||||||| |||||| ||||||||||||||||| |||| |||||||    
T  27197297 accctcatccaatacaatttttttagttcctcaaatgaggagggttttgtattatgaagaa 27197237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 289 - 403
Target Start/End: Original strand, 47714709 - 47714825
Alignment:
Q  289 accctcctccaatacaattttttagttccccaaatgaggagggttttatattttga-agaaaaataagcctccaaagtcc-ctccttctgatgtcttata 386  Q
    ||||||| |||||||||||||| ||||||||||||||||  | |||| |||| |||   |||||| | ||||||||| || |||||||  ||||||| ||    
T  47714709 accctcccccaatacaatttttgagttccccaaatgagggagattttttattatgagtaaaaaattaacctccaaagccctctccttccaatgtcttcta 47714808  T
Q  387 tttcttccacttactcc 403  Q
    |||||||||||| ||||    
T  47714809 tttcttccacttgctcc 47714825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 296 - 398
Target Start/End: Complemental strand, 2927890 - 2927787
Alignment:
Q  296 tccaatacaattttttagttccc-caaatgaggagggttttatattttgaagaaaaataagcctccaaagtccctccttctgatgtcttatatttcttcc 394  Q
    ||||||||||||||||||||||| ||||  || ||||||||||||||||||   ||||||||| |||||| | ||||| |  || || | ||||||||||    
T  2927890 tccaatacaattttttagttccctcaaacaagaagggttttatattttgaaattaaataagcccccaaagcctctcctcccaatttcctctatttcttcc 2927791  T
Q  395 actt 398  Q
    ||||    
T  2927790 actt 2927787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 306 - 357
Target Start/End: Complemental strand, 3333891 - 3333840
Alignment:
Q  306 ttttttagttccccaaatgaggagggttttatattttgaagaaaaataagcc 357  Q
    |||||||  |||||||||||||||||||| |||||||||||||| |||||||    
T  3333891 ttttttaactccccaaatgaggagggtttcatattttgaagaaatataagcc 3333840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 296 - 357
Target Start/End: Original strand, 38401952 - 38402015
Alignment:
Q  296 tccaatacaattttttagttcccc-aaatgaggagggtt-ttatattttgaagaaaaataagcc 357  Q
    |||||||||||||||||||||||| |||||| || |||| | ||||||||||||||||||||||    
T  38401952 tccaatacaattttttagttcccctaaatgacgaaggttctaatattttgaagaaaaataagcc 38402015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 297 - 401
Target Start/End: Complemental strand, 38526190 - 38526083
Alignment:
Q  297 ccaatacaattttttagttcccc-aaatgaggagggttttatattttga-agaaaaataagcctccaaagtcc-ctccttctgatgtcttatatttcttc 393  Q
    |||||||||||||| |||||||| ||||||||  | ||||||||| ||| | |||||| | ||||||||| || |||||||  ||||||| |||||||||    
T  38526190 ccaatacaatttttgagttcccccaaatgagggagattttatattatgagaaaaaaattaacctccaaagccctctccttccaatgtcttctatttcttc 38526091  T
Q  394 cacttact 401  Q
    ||||||||    
T  38526090 cacttact 38526083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 294 - 352
Target Start/End: Original strand, 40118925 - 40118984
Alignment:
Q  294 cctccaatacaattttttagtt-ccccaaatgaggagggttttatattttgaagaaaaat 352  Q
    |||||||||||||||||||||| |||||||||||||||||||| | |  |||||||||||    
T  40118925 cctccaatacaattttttagttcccccaaatgaggagggttttgtttaatgaagaaaaat 40118984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 289 - 367
Target Start/End: Complemental strand, 27922007 - 27921930
Alignment:
Q  289 accctcctccaatacaattttttagttccccaaatgaggagggttttatattttgaagaaaaataagcctccaaagtcc 367  Q
    |||||| |||||||||| |||| |||| || | | |||||||||||||||||||||| |||||||| || |||||||||    
T  27922007 accctcttccaatacaacttttgagtttccaagacgaggagggttttatattttgaa-aaaaataaacccccaaagtcc 27921930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 289 - 350
Target Start/End: Complemental strand, 44400754 - 44400692
Alignment:
Q  289 accctcctccaatacaattttttagttc-cccaaatgaggagggttttatattttgaagaaaa 350  Q
    ||||||||||||||||||||||||||||  |||||||| ||||||||| |||  |||||||||    
T  44400754 accctcctccaatacaattttttagttcgtccaaatgaagagggttttgtatcatgaagaaaa 44400692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 289 - 350
Target Start/End: Original strand, 48908910 - 48908972
Alignment:
Q  289 accctcctccaatacaattttttagttcc-ccaaatgaggagggttttatattttgaagaaaa 350  Q
    |||||||||||||| |||||||||||||| |||||| | ||||||||| |||| |||||||||    
T  48908910 accctcctccaatataattttttagttcctccaaattatgagggttttgtattatgaagaaaa 48908972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 294 - 350
Target Start/End: Original strand, 37674181 - 37674238
Alignment:
Q  294 cctccaatacaattttttagttcc-ccaaatgaggagggttttatattttgaagaaaa 350  Q
    |||||||||||||||||||||||| | |||||||||||||||| |||  |||||||||    
T  37674181 cctccaatacaattttttagttcctcaaaatgaggagggttttgtatcatgaagaaaa 37674238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 289 - 352
Target Start/End: Original strand, 517668 - 517731
Alignment:
Q  289 accctcctccaatacaattttttagttcccc-aaatgaggagggttttatattttgaagaaaaat 352  Q
    |||||||| ||||||||||||  |||||||| |||||||||||||||| |||| |||||||||||    
T  517668 accctccttcaatacaattttg-agttcccccaaatgaggagggttttgtattatgaagaaaaat 517731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 295 - 334
Target Start/End: Original strand, 50535144 - 50535184
Alignment:
Q  295 ctccaatacaattttttagttcccc-aaatgaggagggttt 334  Q
    ||||||||||||||||||||||||| |||||||||||||||    
T  50535144 ctccaatacaattttttagttcccctaaatgaggagggttt 50535184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 307 - 354
Target Start/End: Complemental strand, 30697395 - 30697348
Alignment:
Q  307 tttttagttccccaaatgaggagggttttatattttgaagaaaaataa 354  Q
    |||||| ||||||||||| ||||||||||||||||  |||||||||||    
T  30697395 tttttaattccccaaatggggagggttttatatttcaaagaaaaataa 30697348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 289 - 351
Target Start/End: Complemental strand, 36637845 - 36637782
Alignment:
Q  289 accctcctccaatacaattttttagtt-ccccaaatgaggagggttttatattttgaagaaaaa 351  Q
    ||||||||| ||||||||||  ||||| |||||||||| |||  ||||||||||||||||||||    
T  36637845 accctcctctaatacaatttcgtagtttccccaaatgacgagaattttatattttgaagaaaaa 36637782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 306 - 357
Target Start/End: Complemental strand, 54747705 - 54747654
Alignment:
Q  306 ttttttagttccccaaatgaggagggttttatattttgaagaaaaataagcc 357  Q
    |||||||||| ||||||| |  | ||||||||||||||||||||||||||||    
T  54747705 ttttttagtttcccaaataaataaggttttatattttgaagaaaaataagcc 54747654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 289 - 350
Target Start/End: Original strand, 5939817 - 5939879
Alignment:
Q  289 accctcctccaatacaattttttagttcc-ccaaatgaggagggttttatattttgaagaaaa 350  Q
    |||||||||||||||| |||| ||||||| ||||||||||| | |||| |||| |||||||||    
T  5939817 accctcctccaatacagttttgtagttcctccaaatgaggaagattttgtattatgaagaaaa 5939879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 293 - 350
Target Start/End: Original strand, 15499339 - 15499397
Alignment:
Q  293 tcctccaatacaattttttagttc-cccaaatgaggagggttttatattttgaagaaaa 350  Q
    |||||||||||||||||| ||||| |||||||||||| | |||| |||| |||||||||    
T  15499339 tcctccaatacaatttttgagttctcccaaatgaggaagattttgtattatgaagaaaa 15499397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 294 - 352
Target Start/End: Complemental strand, 16883394 - 16883336
Alignment:
Q  294 cctccaatacaattttttagttccccaaatgaggagggttttatattttgaagaaaaat 352  Q
    |||||||||||||||||| ||| |||||| ||||||| |||  |||| |||||||||||    
T  16883394 cctccaatacaatttttttgtttcccaaacgaggaggatttggtattatgaagaaaaat 16883336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 295 - 352
Target Start/End: Complemental strand, 22225405 - 22225347
Alignment:
Q  295 ctccaatacaattttttagttcccc-aaatgaggagggttttatattttgaagaaaaat 352  Q
    |||||||| |||||||||||||||| |||||||||| ||||  |||| |||||||||||    
T  22225405 ctccaatataattttttagttcccctaaatgaggagagtttagtattatgaagaaaaat 22225347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 293 - 350
Target Start/End: Original strand, 41099767 - 41099824
Alignment:
Q  293 tcctccaatacaattttttagttc-cccaaatgaggagggttttatattttgaagaaaa 350  Q
    |||||||||||||||||| ||||| ||||||| ||||||||||| |||| |||||||||    
T  41099767 tcctccaatacaattttt-agttctcccaaataaggagggttttgtattgtgaagaaaa 41099824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 291 - 403
Target Start/End: Complemental strand, 46017269 - 46017156
Alignment:
Q  291 cctcctccaatacaattttttagttc-cccaaatgaggagggttttatattttgaagaaaaataagcctccaaagtc-cctccttctgatgtcttatatt 388  Q
    |||||||||||||||||||| ||||| ||||||| |||||| |||| |||| || || ||||| | |||||||||||  ||||| |  |||||||  |||    
T  46017269 cctcctccaatacaatttttgagttctcccaaataaggaggattttttattatg-agtaaaattaacctccaaagtcttctcctcccaatgtcttccatt 46017171  T
Q  389 tcttccacttactcc 403  Q
    |||| ||||||||||    
T  46017170 tctttcacttactcc 46017156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 289 - 350
Target Start/End: Complemental strand, 47359364 - 47359302
Alignment:
Q  289 accctcctccaatacaatttttt-agttccccaaatgaggagggttttatattttgaagaaaa 350  Q
    ||||||||||| ||||||||||| |||| |||||| |||||||||||  |||| |||||||||    
T  47359364 accctcctccactacaatttttttagtttcccaaacgaggagggtttagtattatgaagaaaa 47359302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 289 - 330
Target Start/End: Original strand, 52620861 - 52620903
Alignment:
Q  289 accctcctccaatacaattttttagttc-cccaaatgaggagg 330  Q
    |||||||||||||||||||||| ||||| ||||||||||||||    
T  52620861 accctcctccaatacaatttttgagttctcccaaatgaggagg 52620903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 292 - 352
Target Start/End: Original strand, 21777675 - 21777736
Alignment:
Q  292 ctcctccaatacaattttttagttc-cccaaatgaggagggttttatattttgaagaaaaat 352  Q
    ||||||||||||||||||| | ||| ||||||||| ||| ||||| |||| |||||||||||    
T  21777675 ctcctccaatacaatttttgatttctcccaaatgatgagagttttgtattatgaagaaaaat 21777736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 289 - 403
Target Start/End: Original strand, 24242128 - 24242245
Alignment:
Q  289 accctcctccaatacaattttttagtt-ccccaaatgaggagggttttatattttga-agaaaaataagcctccaaagtcc-ctccttctgatgtcttat 385  Q
    ||||||| |||||||||||||| |||| |||||||||||| || |||| |||| |||   |||||| | |||||||||||| ||||| |  || |||| |    
T  24242128 accctcccccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagtcctctcctcccaatatcttct 24242227  T
Q  386 atttcttccacttactcc 403  Q
    ||||||||||||| ||||    
T  24242228 atttcttccacttgctcc 24242245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 307 - 352
Target Start/End: Complemental strand, 30995896 - 30995851
Alignment:
Q  307 tttttagttccccaaatgaggagggttttatattttgaagaaaaat 352  Q
    |||||||||||||||||||| || ||||| |||| |||||||||||    
T  30995896 tttttagttccccaaatgagtagagttttgtattatgaagaaaaat 30995851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 292 - 348
Target Start/End: Complemental strand, 44979461 - 44979404
Alignment:
Q  292 ctcctccaatacaattttttagtt-ccccaaatgaggagggttttatattttgaagaa 348  Q
    |||||||||||||||||||||||| |||||||| ||| || ||| ||||| |||||||    
T  44979461 ctcctccaatacaattttttagttcccccaaattagggggatttaatattatgaagaa 44979404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 57; Significance: 2e-23; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 289 - 403
Target Start/End: Original strand, 35708789 - 35708905
Alignment:
Q  289 accctcctccaatacaattttttagttccc-caaatgaggagggttttatattttgaagaaaaa-taagcctccaaagtccctccttctgatgtcttata 386  Q
    ||||||||||| |||||||||||||||||| |||||||||||| ||||||| |||||||||||| ||| || |||||| |||||||||  ||||| |  |    
T  35708789 accctcctccagtacaattttttagttccctcaaatgaggaggattttatactttgaagaaaaactaaccccccaaagcccctccttccaatgtcctcaa 35708888  T
Q  387 tttcttccacttactcc 403  Q
    |||||||||||||||||    
T  35708889 tttcttccacttactcc 35708905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 289 - 402
Target Start/End: Complemental strand, 39428986 - 39428873
Alignment:
Q  289 accctcctccaatacaattttttagttccccaaatgaggagggttttatattttgaagaaaaataagcctccaaagtccctccttctgatgtcttatatt 388  Q
    ||||||||| ||||||||||||||||||| |||||||||| | |||||||||||||||| ||||||||| | |||| || | ||   |||||| | ||||    
T  39428986 accctcctctaatacaattttttagttcctcaaatgaggaagattttatattttgaagataaataagccgctaaagcccattctctcgatgtcatctatt 39428887  T
Q  389 tcttccacttactc 402  Q
    ||||||||||||||    
T  39428886 tcttccacttactc 39428873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 293 - 348
Target Start/End: Complemental strand, 6373178 - 6373123
Alignment:
Q  293 tcctccaatacaattttttagttccccaaatgaggagggttttatattttgaagaa 348  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6373178 tcctcgaatacaattttttagttccccaaatgaggagggttttatattttgaagaa 6373123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 293 - 360
Target Start/End: Complemental strand, 29022659 - 29022592
Alignment:
Q  293 tcctccaatacaattttttagttccccaaatgaggagggttttatattttgaagaaaaataagcctcc 360  Q
    |||||||||||||||||||||||||  |||||||||| |||||||||||||||||||||||| |||||    
T  29022659 tcctccaatacaattttttagttccttaaatgaggagagttttatattttgaagaaaaataatcctcc 29022592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 295 - 357
Target Start/End: Original strand, 3938172 - 3938235
Alignment:
Q  295 ctccaatacaattttttagttccccaaa-tgaggagggttttatattttgaagaaaaataagcc 357  Q
    |||||||||||||||||||||||||||| |||| |||||||||||||| |||||||||||||||    
T  3938172 ctccaatacaattttttagttccccaaaatgagcagggttttatatttcgaagaaaaataagcc 3938235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 289 - 356
Target Start/End: Complemental strand, 29799691 - 29799624
Alignment:
Q  289 accctcctccaatacaattttttagttccccaaatgaggagggttttatattttgaagaaaaataagc 356  Q
    |||||| ||||||||| ||||||||||||||| || | ||||||||||||||||||||||||||||||    
T  29799691 accctcatccaatacagttttttagttccccacataaagagggttttatattttgaagaaaaataagc 29799624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 296 - 401
Target Start/End: Original strand, 3081374 - 3081480
Alignment:
Q  296 tccaatacaattttttagttccc-caaatgaggagggttttatattttgaagaaaaataagcctccaaagtccctccttctgatgtcttatatttcttcc 394  Q
    ||||||| |||||||||||||   ||||||||||||||||||||| ||||||||||||||||| |||||| || |||| |  || || | ||||||||||    
T  3081374 tccaatataattttttagttctatcaaatgaggagggttttatatattgaagaaaaataagcccccaaagcccttcctcccaatatcctctatttcttcc 3081473  T
Q  395 acttact 401  Q
    |||||||    
T  3081474 acttact 3081480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 291 - 352
Target Start/End: Original strand, 19389856 - 19389917
Alignment:
Q  291 cctcctccaatacaattttttagttccccaaatgaggagggttttatattttgaagaaaaat 352  Q
    |||||||||||||||||||||||||||||||||||||||| |||| |||| |||||| ||||    
T  19389856 cctcctccaatacaattttttagttccccaaatgaggaggattttgtattatgaagataaat 19389917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 291 - 374
Target Start/End: Original strand, 19338613 - 19338697
Alignment:
Q  291 cctcctccaatacaattttttagttccc-caaatgaggagggttttatattttgaagaaaaataagcctccaaagtccctccttc 374  Q
    |||||| ||||||||||||||||||||| ||||  |  ||||||||||||||||||||||||||| || |||||| |||||||||    
T  19338613 cctccttcaatacaattttttagttccctcaaaccataagggttttatattttgaagaaaaataatcccccaaagcccctccttc 19338697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 289 - 350
Target Start/End: Original strand, 5772756 - 5772818
Alignment:
Q  289 accctcctccaatacaattttttagttcc-ccaaatgaggagggttttatattttgaagaaaa 350  Q
    |||||||||||||||||||||||| |||| |||||||||||||||||| |||| |||||||||    
T  5772756 accctcctccaatacaattttttaattcctccaaatgaggagggttttgtattatgaagaaaa 5772818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 302 - 402
Target Start/End: Original strand, 12064035 - 12064136
Alignment:
Q  302 acaattttttagttccccaaatgaggagggttttatattttgaagaaaaataag-cctccaaagtccctccttctgatgtcttatatttcttccacttac 400  Q
    |||| ||||||| ||||||||| |  |||||||||||||||||||||||||||| ||| ||||  |||| ||||  ||||| | ||||||||||||||||    
T  12064035 acaaatttttagatccccaaattattagggttttatattttgaagaaaaataagtccttcaaatacccttcttccaatgtcatctatttcttccacttac 12064134  T
Q  401 tc 402  Q
    ||    
T  12064135 tc 12064136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 294 - 350
Target Start/End: Original strand, 35683514 - 35683571
Alignment:
Q  294 cctccaatacaattttttagttcc-ccaaatgaggagggttttatattttgaagaaaa 350  Q
    |||||||||||||||||||||||| |||||||||||||||||| |||| |||||||||    
T  35683514 cctccaatacaattttttagttcctccaaatgaggagggttttgtattatgaagaaaa 35683571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 291 - 350
Target Start/End: Complemental strand, 39649614 - 39649554
Alignment:
Q  291 cctcctccaatacaattttttagttcc-ccaaatgaggagggttttatattttgaagaaaa 350  Q
    ||||||||||||||||||||||||||| |||||||||||||||||| |||  |||||||||    
T  39649614 cctcctccaatacaattttttagttcctccaaatgaggagggttttgtatcatgaagaaaa 39649554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 289 - 352
Target Start/End: Original strand, 43496897 - 43496960
Alignment:
Q  289 accctcctccaatacaattttttagttccccaaatgaggagggttttatattttgaagaaaaat 352  Q
    |||||||||||||||||||||| ||||||||||||||| || ||||| |||| | |||||||||    
T  43496897 accctcctccaatacaatttttaagttccccaaatgagcagagttttgtattattaagaaaaat 43496960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 293 - 350
Target Start/End: Complemental strand, 10843085 - 10843027
Alignment:
Q  293 tcctccaatacaattttttagttcc-ccaaatgaggagggttttatattttgaagaaaa 350  Q
    |||| |||||||||||||||||||| |||||||||||||||||| |||| |||||||||    
T  10843085 tccttcaatacaattttttagttcctccaaatgaggagggttttgtattatgaagaaaa 10843027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 289 - 350
Target Start/End: Original strand, 38568403 - 38568465
Alignment:
Q  289 accctcctccaatacaattttttagtt-ccccaaatgaggagggttttatattttgaagaaaa 350  Q
    |||||||||||||| |||||||||||| |||||||||||||||||||  |||| |||||||||    
T  38568403 accctcctccaatataattttttagttcccccaaatgaggagggtttagtattatgaagaaaa 38568465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 296 - 352
Target Start/End: Original strand, 3925824 - 3925880
Alignment:
Q  296 tccaatacaattttttagttccccaaatgaggagggttttatattttgaagaaaaat 352  Q
    ||||||||||||||||||||||||||||||||||  || |||||  |||||||||||    
T  3925824 tccaatacaattttttagttccccaaatgaggagaattctatatcatgaagaaaaat 3925880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 292 - 363
Target Start/End: Original strand, 4841899 - 4841971
Alignment:
Q  292 ctcctccaatacaattttttagttccccaaatgaggagggttttatattttgaagaaaaataag-cctccaaa 363  Q
    |||||| ||||||||||||||||| |  |||||||||||||| |||||||||| ||| |||||| ||||||||    
T  4841899 ctcctcaaatacaattttttagtttcttaaatgaggagggttgtatattttgatgaagaataagtcctccaaa 4841971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 291 - 350
Target Start/End: Original strand, 10955728 - 10955788
Alignment:
Q  291 cctcctccaatacaattttttagtt-ccccaaatgaggagggttttatattttgaagaaaa 350  Q
    |||||||||||||||| |||||||| |||||||||||||||||||| |||| ||| |||||    
T  10955728 cctcctccaatacaatcttttagttcccccaaatgaggagggttttgtattatgatgaaaa 10955788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 289 - 403
Target Start/End: Original strand, 7398816 - 7398931
Alignment:
Q  289 accctcctccaatacaattttttagttccccaaatgaggagggttttatattttgaagaaaaataagcctccaaagtccctccttct-gatgtcttatat 387  Q
    |||||| | ||||||||||||  ||||||||||||||||| | ||||  ||| ||||||||||| |||| ||||||||   || |||  ||||| |||||    
T  7398816 accctcgttcaatacaattttaaagttccccaaatgaggatgattttgaattatgaagaaaaatgagcccccaaagtcttcccctctcaatgtcatatat 7398915  T
Q  388 ttcttccacttactcc 403  Q
    || |||||||||||||    
T  7398916 tttttccacttactcc 7398931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 293 - 393
Target Start/End: Complemental strand, 6491225 - 6491123
Alignment:
Q  293 tcctccaatacaattttttagtt-ccccaaatgaggagggttttatattttgaagaaaaataagcctccaaagtcc-ctccttctgatgtcttatatttc 390  Q
    |||||||||||||||||| |||| ||||||||||||| | |||| |||| ||||||||||| | || |||||| || ||||| |  ||||||| ||||||    
T  6491225 tcctccaatacaatttttgagttcccccaaatgaggaagattttgtattatgaagaaaaatgaacccccaaagccctctcctaccaatgtcttttatttc 6491126  T
Q  391 ttc 393  Q
    |||    
T  6491125 ttc 6491123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 289 - 327
Target Start/End: Complemental strand, 41638399 - 41638361
Alignment:
Q  289 accctcctccaatacaattttttagttccccaaatgagg 327  Q
    ||||||| |||||||||||||||||||||||||||||||    
T  41638399 accctcccccaatacaattttttagttccccaaatgagg 41638361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 289 - 401
Target Start/End: Complemental strand, 39011877 - 39011759
Alignment:
Q  289 accctcctccaatacaattttttagttc-cccaaatgaggagggtttta----tattttgaagaaaaataag-cctccaaagtccctccttctgatgtct 382  Q
    |||||||  ||||||||||||||||||| | ||||||||||| ||||||    ||||| ||||||||||||| || |||||| ||||| |||  ||||      
T  39011877 accctccatcaatacaattttttagttctctcaaatgaggagagttttagacttatttcgaagaaaaataagccccccaaagcccctctttccaatgtta 39011778  T
Q  383 tatatttcttccacttact 401  Q
    | |||||||||||||||||    
T  39011777 tctatttcttccacttact 39011759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 292 - 354
Target Start/End: Complemental strand, 6632691 - 6632628
Alignment:
Q  292 ctcctccaatacaattttttagttccccaaa-tgaggagggttttatattttgaagaaaaataa 354  Q
    ||||||||||| || |||||||||| ||||| ||| |||| |||||||||| ||||||||||||    
T  6632691 ctcctccaatataaatttttagttctccaaaatgatgaggattttatatttggaagaaaaataa 6632628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 298 - 345
Target Start/End: Complemental strand, 15916920 - 15916873
Alignment:
Q  298 caatacaattttttagttccccaaatgaggagggttttatattttgaa 345  Q
    |||| |||||||||| || || ||||||||||||||||||||||||||    
T  15916920 caatgcaattttttactttcctaaatgaggagggttttatattttgaa 15916873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 289 - 398
Target Start/End: Original strand, 27480208 - 27480318
Alignment:
Q  289 accctcctccaatacaattttttagttccc-caaatgaggagggttttatattttgaagaaaaataagcctccaaagtcc-ctccttctgatgtcttata 386  Q
    ||||||| |||||||||||||| ||||||| |||||||||||| |||| ||||  | | |||||| | ||||||||| || ||||| |  ||||||| ||    
T  27480208 accctcccccaatacaatttttgagttccctcaaatgaggaggattttttattaagta-aaaaattaacctccaaagccctctcctcccaatgtcttcta 27480306  T
Q  387 tttcttccactt 398  Q
    ||||||||||||    
T  27480307 tttcttccactt 27480318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 293 - 350
Target Start/End: Original strand, 9684821 - 9684879
Alignment:
Q  293 tcctccaatacaattttttagttcccc-aaatgaggagggttttatattttgaagaaaa 350  Q
    |||| |||| |||||||||| |||||| |||||||||||||||| |||| |||||||||    
T  9684821 tccttcaatgcaattttttaattcccccaaatgaggagggttttgtattatgaagaaaa 9684879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 289 - 350
Target Start/End: Complemental strand, 10438031 - 10437969
Alignment:
Q  289 accctcctccaatacaattttttagttcc-ccaaatgaggagggttttatattttgaagaaaa 350  Q
    ||||||||||||||||| ||||||||||| | ||||||||||| |||| |||| | |||||||    
T  10438031 accctcctccaatacaactttttagttcctctaaatgaggaggattttgtattataaagaaaa 10437969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 291 - 353
Target Start/End: Complemental strand, 12150625 - 12150563
Alignment:
Q  291 cctcctccaatacaattttttagttccccaaatgaggagggttttatattttgaagaaaaata 353  Q
    |||||||||||||||||||||||||||  |||| |||  | |||| |||| ||||||||||||    
T  12150625 cctcctccaatacaattttttagttccttaaattagggagattttgtattatgaagaaaaata 12150563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 289 - 334
Target Start/End: Original strand, 14570076 - 14570122
Alignment:
Q  289 accctcctccaatacaattttttagttc-cccaaatgaggagggttt 334  Q
    ||||| |||||||| ||||||||||||| ||||||||||||||||||    
T  14570076 accctactccaatataattttttagttctcccaaatgaggagggttt 14570122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 298 - 352
Target Start/End: Complemental strand, 22103551 - 22103498
Alignment:
Q  298 caatacaattttttagttccccaaatgaggagggttttatattttgaagaaaaat 352  Q
    ||||||||||||| |||||||| ||||| ||||||||| |||| |||||||||||    
T  22103551 caatacaattttt-agttccccgaatgatgagggttttgtattatgaagaaaaat 22103498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 288 - 345
Target Start/End: Original strand, 13294009 - 13294066
Alignment:
Q  288 gaccctcctccaatacaattttttagttccccaaatgaggagggttttatattttgaa 345  Q
    ||||||||||||||||||||||| |||| |  ||||||||||| |||| |||| ||||    
T  13294009 gaccctcctccaatacaatttttaagtttcttaaatgaggaggattttgtattatgaa 13294066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 289 - 403
Target Start/End: Original strand, 38928738 - 38928855
Alignment:
Q  289 accctcctccaatacaattttttagtt-ccccaaatgaggagggttttatattttga-agaaaaataagcctccaaagtcc-ctccttctgatgtcttat 385  Q
    |||||||  ||||||||||||| |||| |||||||||||| || |||| |||| |||   |||||| | |||||||||||| ||| |||  ||||||| |    
T  38928738 accctcccgcaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagtcctctcattccaatgtcttct 38928837  T
Q  386 atttcttccacttactcc 403  Q
    ||||||||||||| ||||    
T  38928838 atttcttccacttgctcc 38928855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 289 - 403
Target Start/End: Complemental strand, 41695022 - 41694905
Alignment:
Q  289 accctcctccaatacaattttttagtt-ccccaaatgaggagggttttatattttga-agaaaaataagcctcc-aaagtccctccttctgatgtcttat 385  Q
    ||||||| |||||||||||||| |||| |||||||||||| || |||| |||| |||   |||||| | ||||| ||| || |||||||  ||||||| |    
T  41695022 accctcccccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaaactctctccttccaatgtcttct 41694923  T
Q  386 atttcttccacttactcc 403  Q
    ||||||||||||| ||||    
T  41694922 atttcttccacttgctcc 41694905  T

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Target: scaffold0598 (Bit Score: 46; Significance: 8e-17; HSPs: 1)
Name: scaffold0598
Description:

Target: scaffold0598; HSP #1
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 289 - 373
Target Start/End: Original strand, 9441 - 9525
Alignment:
Q  289 accctcctccaatacaattttttagttccccaaatgaggagggttttatattttgaagaaaaataag-cctccaaagtccctcctt 373  Q
    ||||||||||| |||||||||||||||||||||||||| | |  |||||||||| |||||||||||| || |||||||||||||||    
T  9441 accctcctccagtacaattttttagttccccaaatgagaatgactttatatttt-aagaaaaataagccccccaaagtccctcctt 9525  T

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Target: scaffold0248 (Bit Score: 43; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0248
Description:

Target: scaffold0248; HSP #1
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 289 - 350
Target Start/End: Original strand, 232 - 294
Alignment:
Q  289 accctcctccaatacaattttttagttcc-ccaaatgaggagggttttatattttgaagaaaa 350  Q
    ||||||||||||||||||||||||||||| |||||| ||||||||||| |||| |||||||||    
T  232 accctcctccaatacaattttttagttcctccaaataaggagggttttgtattatgaagaaaa 294  T

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Target: scaffold0051 (Bit Score: 43; Significance: 0.000000000000005; HSPs: 4)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 289 - 350
Target Start/End: Original strand, 6793 - 6855
Alignment:
Q  289 accctcctccaatacaattttttagttcc-ccaaatgaggagggttttatattttgaagaaaa 350  Q
    |||||||||||||||||| |||||||||| |||||||||||||||||| |||| |||||||||    
T  6793 accctcctccaatacaatgttttagttcctccaaatgaggagggttttgtattatgaagaaaa 6855  T

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Target: scaffold0051; HSP #2
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 289 - 350
Target Start/End: Original strand, 7776 - 7838
Alignment:
Q  289 accctcctccaatacaattttttagttcc-ccaaatgaggagggttttatattttgaagaaaa 350  Q
    |||||||||||||||||| |||||||||| |||||||||||||||||| |||| |||||||||    
T  7776 accctcctccaatacaatgttttagttcctccaaatgaggagggttttgtattatgaagaaaa 7838  T

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Target: scaffold0051; HSP #3
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 293 - 350
Target Start/End: Original strand, 731 - 788
Alignment:
Q  293 tcctccaatacaattttttagttccccaaatgaggagggttttatattttgaagaaaa 350  Q
    |||||||| ||||| |||||||||| ||||||||||||||||| |||| |||||||||    
T  731 tcctccaagacaatgttttagttcctcaaatgaggagggttttgtattatgaagaaaa 788  T

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Target: scaffold0051; HSP #4
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 293 - 350
Target Start/End: Original strand, 3608 - 3665
Alignment:
Q  293 tcctccaatacaattttttagttccccaaatgaggagggttttatattttgaagaaaa 350  Q
    |||||||| ||||| |||||||||| ||||||||||||||||| |||| |||||||||    
T  3608 tcctccaagacaatgttttagttcctcaaatgaggagggttttgtattatgaagaaaa 3665  T

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Target: scaffold0031 (Bit Score: 43; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 289 - 350
Target Start/End: Original strand, 93542 - 93604
Alignment:
Q  289 accctcctccaatacaattttttagttcc-ccaaatgaggagggttttatattttgaagaaaa 350  Q
    ||||||||||||||||||||||||||||| |||||||||||| ||||| |||| |||||||||    
T  93542 accctcctccaatacaattttttagttcctccaaatgaggagagttttgtattatgaagaaaa 93604  T

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Target: scaffold0128 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 289 - 350
Target Start/End: Complemental strand, 26425 - 26362
Alignment:
Q  289 accctcctccaa-tacaattttttagttcc-ccaaatgaggagggttttatattttgaagaaaa 350  Q
    |||||||||||| ||||||||||||||||| |||||||||||||||||| |||| |||||||||    
T  26425 accctcctccaaatacaattttttagttcctccaaatgaggagggttttgtattatgaagaaaa 26362  T

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Target: scaffold0471 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0471
Description:

Target: scaffold0471; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 305 - 363
Target Start/End: Original strand, 4698 - 4756
Alignment:
Q  305 attttttagttccccaaatgaggagggttttatattttgaagaaaaataagcctccaaa 363  Q
    |||||||||||||| | | |||||| |||||||||||||||||||||||||||| ||||    
T  4698 attttttagttccctatacgaggagagttttatattttgaagaaaaataagccttcaaa 4756  T

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Target: scaffold0136 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 293 - 350
Target Start/End: Original strand, 2063 - 2121
Alignment:
Q  293 tcctccaatacaattttttagttcc-ccaaatgaggagggttttatattttgaagaaaa 350  Q
    |||||||||||||||||| |||||| |||||||||||||||||| |||| |||||||||    
T  2063 tcctccaatacaatttttcagttcctccaaatgaggagggttttgtattatgaagaaaa 2121  T

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Target: scaffold0053 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 293 - 350
Target Start/End: Complemental strand, 29285 - 29227
Alignment:
Q  293 tcctccaatacaattttttagttcc-ccaaatgaggagggttttatattttgaagaaaa 350  Q
    ||||||||||||||||||||||||| |||||||| ||||||||| |||| |||||||||    
T  29285 tcctccaatacaattttttagttcctccaaatgatgagggttttgtattatgaagaaaa 29227  T

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Target: scaffold0274 (Bit Score: 36; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0274
Description:

Target: scaffold0274; HSP #1
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 289 - 352
Target Start/End: Complemental strand, 15962 - 15899
Alignment:
Q  289 accctcctccaatacaattttttagttccccaaatgaggagggttttatattttgaagaaaaat 352  Q
    |||||||||||||||||||||| | ||||||||||||||||  ||||  ||| |||||||||||    
T  15962 accctcctccaatacaatttttaaattccccaaatgaggagattttttcattatgaagaaaaat 15899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0519 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0519
Description:

Target: scaffold0519; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 292 - 354
Target Start/End: Complemental strand, 7557 - 7494
Alignment:
Q  292 ctcctccaatacaattttttagttcc-ccaaatgaggagggttttatattttgaagaaaaataa 354  Q
    ||||| |||||||||||||||||||| |||||||| || | |||| |||| |||||||||||||    
T  7557 ctccttcaatacaattttttagttcctccaaatgacgaagattttgtattatgaagaaaaataa 7494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 293 - 354
Target Start/End: Complemental strand, 82837 - 82775
Alignment:
Q  293 tcctccaatacaattttttagttccc-caaatgaggagggttttatattttgaagaaaaataa 354  Q
    |||||||||||||||||  ||||||| ||||| |||||| |||| |||| |||||||||||||    
T  82837 tcctccaatacaattttggagttccctcaaattaggaggattttgtattatgaagaaaaataa 82775  T

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Target: scaffold0028 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 289 - 327
Target Start/End: Original strand, 35491 - 35529
Alignment:
Q  289 accctcctccaatacaattttttagttccccaaatgagg 327  Q
    ||||||| |||||||||||||| ||||||||||||||||    
T  35491 accctcccccaatacaatttttgagttccccaaatgagg 35529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 289 - 350
Target Start/End: Original strand, 90911 - 90973
Alignment:
Q  289 accctcctccaatacaattttttagtt-ccccaaatgaggagggttttatattttgaagaaaa 350  Q
    |||||||||||||||||||||||| ||  ||| ||||||||||||||| || | |||||||||    
T  90911 accctcctccaatacaattttttaattatccccaatgaggagggttttgtaatatgaagaaaa 90973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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