View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11925_high_4 (Length: 324)
Name: NF11925_high_4
Description: NF11925
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11925_high_4 |
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Alignment Details
Target: chr6 (Bit Score: 279; Significance: 1e-156; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 279; E-Value: 1e-156
Query Start/End: Original strand, 19 - 313
Target Start/End: Original strand, 9060416 - 9060710
Alignment:
| Q |
19 |
ttttcatcacaatttcaggaaaccattgaatttcattctttatattgtttaggaaagatatagcatgcatgcatgtacctataaaatcaccaagttaggt |
118 |
Q |
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| T |
9060416 |
ttttcatcacaatttcaggaaaccattgaatttcattctttatactgtttaggaaacatatagcatgcatgcatgtacctataaaatcaccaagttaggt |
9060515 |
T |
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| Q |
119 |
agcttgtaggagtcctcttcactttaaatccaaaagtttgtctcctctaatagtggatgggcttgtgcttctaaatagtattaatgtatgattgtgtcta |
218 |
Q |
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| T |
9060516 |
agcttgtaggagtcctcttcactttaaatccaaaagtttgtctcctctaatagtggatgggcttgtgcttctaaatagtattaatgtatgattgtgtcta |
9060615 |
T |
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| Q |
219 |
ttgtatgtgtgactttgatgatgataacaataagtgaaaaaatgatttagctttttcccaattcacgatagtgagctagaatccgcttcccctat |
313 |
Q |
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|||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
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| T |
9060616 |
ttgtatgtgtgactttgatgattataacaataagtgaaaaaatgatttagcttttccccaattcacgatagtgagctagaatccgcttcccctat |
9060710 |
T |
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