View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11925_low_14 (Length: 202)
Name: NF11925_low_14
Description: NF11925
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11925_low_14 |
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Alignment Details
Target: chr7 (Bit Score: 70; Significance: 9e-32; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 108 - 181
Target Start/End: Complemental strand, 23676121 - 23676048
Alignment:
| Q |
108 |
aactcaaatgtatgttattaatgagagaaaaaacaatataataattggaaaccctattcatacatacatacata |
181 |
Q |
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| T |
23676121 |
aactcaaatgtgtgttattaatgagagaaaaaacaatataataattggaaaccctattcatacatacatacata |
23676048 |
T |
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Target: chr7; HSP #2
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 54 - 106
Target Start/End: Complemental strand, 23676507 - 23676455
Alignment:
| Q |
54 |
gagttgtgttatataaacatatacaaaagttagacatggtaagctataaaata |
106 |
Q |
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| T |
23676507 |
gagttgtgttatataaacatatacaaaagttagacatggtaagctataaaata |
23676455 |
T |
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