View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11926_high_15 (Length: 261)
Name: NF11926_high_15
Description: NF11926
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11926_high_15 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 242; Significance: 1e-134; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 12 - 261
Target Start/End: Original strand, 29607089 - 29607338
Alignment:
| Q |
12 |
gagaagaaaacacaagcatagtaagcataagaaacatcacgcactagctctagcaccagagcctacaagttcaagttcaacaatcattaggaggagtccc |
111 |
Q |
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| T |
29607089 |
gagaagaaaacacaagcatagtaagcataagaaacatcacgcactagctctagcaccagagcctacaagttcaagttcaacaatcattaggaggagtccc |
29607188 |
T |
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| Q |
112 |
ccagcaccactggctgatgataatactacaatgagttcagatgaaggaccgtcaccagcacccagtcccagtgcggtaatatccttttccattttacttt |
211 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
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| T |
29607189 |
ccagcaccactggctgatgataatactacaatgagttcagatgaaggaccgtcaccagcacccagtcccagtgcggtaatatctttttccattttacttt |
29607288 |
T |
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| Q |
212 |
aagttacaattctatatttacggacctctttggtctggattatgccgcat |
261 |
Q |
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|||||||||||||||||||||||||||||||||||||||| ||||||||| |
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| T |
29607289 |
aagttacaattctatatttacggacctctttggtctggatcatgccgcat |
29607338 |
T |
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