View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11926_low_13 (Length: 307)
Name: NF11926_low_13
Description: NF11926
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11926_low_13 |
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Alignment Details
Target: chr7 (Bit Score: 274; Significance: 1e-153; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 274; E-Value: 1e-153
Query Start/End: Original strand, 18 - 295
Target Start/End: Original strand, 45519812 - 45520089
Alignment:
| Q |
18 |
taaacaattaattaaaggctcccatacttttaaaatcaatcaaatagaaacttgggactttcttttaccataacaatcatagtaaaaaactacttacaag |
117 |
Q |
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| T |
45519812 |
taaacaattaattaaaggctcccatacttttaaaatcaatcaaatagaaacttgggactttcttttaccataacaatcatagtaaaaaactacttacaag |
45519911 |
T |
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| Q |
118 |
ggatccaattcctcactctctaccttgttataggaagatcacagcaacaaggttaataggttatcaattctattagaagaatgaatgtgcatgcagatta |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45519912 |
ggatccaattcctcactctctaccttgttataggaagatcacagcaacaaggttaataggttatcaattctattagaagaatgaatgtgcatgcagatta |
45520011 |
T |
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| Q |
218 |
cttctttaaataggcttcgtttatcaattcaaatgaaacatcccaaagcaaaaagtatttgcaaatgttgggctccta |
295 |
Q |
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| T |
45520012 |
cttctttaaataggcttcgtttaccaattcaaatgaaacatcccaaagcaaaaagtatttgcaaatgttgggctccta |
45520089 |
T |
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