View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF11928_high_1 (Length: 1197)
Name: NF11928_high_1
Description: NF11928
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11928_high_1 |
 | |
|
Alignment Details
Target: chr5 (Bit Score: 984; Significance: 0; HSPs: 28)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 984; E-Value: 0
Query Start/End: Original strand, 53 - 1184
Target Start/End: Original strand, 30059842 - 30060973
Alignment:
| Q |
53 |
ccatgacaagcataattcatgaaggtcttttttacccatcaaattagccgtttcagcttcagataaactaccaacattgtttaatcctttgatactcagt |
152 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| |||| || ||||||||||||||||||| |||| |||| |
|
|
| T |
30059842 |
ccatgacaagtataattcatgaaggtcttttttacccatcaaattagccgcttcagcttcaaataacctgccaacattgtttaatccttggatatgcagt |
30059941 |
T |
|
| Q |
153 |
tttccaccgaggtttagatcacgtaactctgtcaagctattccctctctctaaactaacaatgtacacacttaatgttcttagacaagttaattttccaa |
252 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30059942 |
tttccaccgaggtttagatcacgtaactctgtcaagctattccctttctctaaactaacaatgtacacacttaatgttcttagacaagttaattttccaa |
30060041 |
T |
|
| Q |
253 |
tgttgggaaacatacgagacaaagatgaacaatattcaatgactatatgtctaagattttgtaaacaaaccaagcgtttcggaagacaactcagtgaatc |
352 |
Q |
| |
|
|||| |||||||| |||||||||| ||| |||||||||||||||||||||||||||||| ||| |||||||||| || |||||||||||| | |
|
|
| T |
30060042 |
tgttaggaaacatgagagacaaagaccgacatacttcaatgactatatgtctaagattttgtaagcaagccaagcgttttgggagacaactcagtttacg |
30060141 |
T |
|
| Q |
353 |
acacttttttattttcaagatttccagtttttgtaagttgtaaattgagttaggcaacttttttatatcaagagaacgaagttccaaataccttaaatga |
452 |
Q |
| |
|
||| | |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30060142 |
acagtcttttattttcaagatttccagtttttgtaagttgtaaattgagtcaggcaacttttttatatcaagagaacgaagttccaaataccttaaatga |
30060241 |
T |
|
| Q |
453 |
attaaactacctagtaatggctctcggataaaggttatgcgtaaaacccgaagagaaaggtttgttgggaagtaatcatgtttttcttttgaccaagtac |
552 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
30060242 |
attaaactacctagtaatggctctcggataaaggttatgcataaaacccgaagagaaaggtttgttgggaagtaatcatgtttttcttttgaaaaagtac |
30060341 |
T |
|
| Q |
553 |
tacaaaactcaaaccatgttcgcaaggattcaactattttgaaagcatccttgtcgaaggataacaagtctttagtgtcaaaactaatgtggtgtgtgct |
652 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||| |
|
|
| T |
30060342 |
tacaaaactcaaaccatgttcgcaaggattcaactattttgaaagcatccttgtcgaaggataacgagtctttattgtcaaaactaatgtggtgtgtgct |
30060441 |
T |
|
| Q |
653 |
ttttgacaaactagtcaagtttgcattctccaaatacatacattcttgccccattactgattgagcaagatcatggacaagatcatgcatcttgaatgaa |
752 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
30060442 |
ttttgacaaactagtcaagtttgcattctccaaatacatacattcttgccccattactgattgagcaagatcatggacaaggtcatgcatcttgaatgaa |
30060541 |
T |
|
| Q |
753 |
atgtcgccagaaaattcatccatttttctatcttgaaagaatgatttttggtacaattcatcccacaccatgatgccagcatcttcaacctccgtattac |
852 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| |
|
|
| T |
30060542 |
atgtcgccagaaaattcatccatttttctatcttgaaagaatgatttttggtacaattcatcccacaccatgatgccaacatcttcaacctccgtagtac |
30060641 |
T |
|
| Q |
853 |
ccctagatgaaatcaatccattagccatccaaagccaaatcaattcttcctttaggatttctgcatctttgggaaatatagcacaaaaagagaaacattg |
952 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30060642 |
ccctagatgaaatcaatccattagccatccaaagccaaatcaattcttcctttaggatttctgcatctttgggaaatatagcacaaaaagagaaacattg |
30060741 |
T |
|
| Q |
953 |
ttttagggctgccggtaaataaaagtaactcaacctcaaagcaggcaaaatggaattttcatctgataaatcccaaagttcactgtctttaattttaagc |
1052 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30060742 |
ttttagggctgccggtaaataaaagtaactcaacctcaaagcaggcaaaatggaattttcatctgataaatcccaaagttcactgtctttaattttaagc |
30060841 |
T |
|
| Q |
1053 |
cattccttttcatctttccttgagttcattaaacttcccaatgattttgctgcaagaggcaatccattgcatttctttactatctcctttcctattgcca |
1152 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30060842 |
cattccttttcatctttccttgagttcattaaacttcccaatgattttgctgcaagaggcaatccattgcatttctttactatctcctttcctattgcca |
30060941 |
T |
|
| Q |
1153 |
cgagatcagcacgctcttctttgtgatgtcca |
1184 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |
|
|
| T |
30060942 |
cgagatcagcacgctcttctttgtgatgtcca |
30060973 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 938; E-Value: 0
Query Start/End: Original strand, 52 - 1184
Target Start/End: Original strand, 30749115 - 30750247
Alignment:
| Q |
52 |
cccatgacaagcataattcatgaaggtcttttttacccatcaaattagccgtttcagcttcagataaactaccaacattgtttaatcctttgatactcag |
151 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
30749115 |
cccatgacaagcataattcatgaaggtcttttttacccatcaaattagccgcttcagcttcagataaactgccaacattgtttaatcctttgatactcag |
30749214 |
T |
|
| Q |
152 |
ttttccaccgaggtttagatcacgtaactctgtcaagctattccctctctctaaactaacaatgtacacacttaatgttcttagacaagttaattttcca |
251 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30749215 |
ttttccaccgaggtttagatcacgtaactctgtcaagctattccctttctctaaactaacaatgtacacacttaatgttcttagacaagttaattttcca |
30749314 |
T |
|
| Q |
252 |
atgttgggaaacatacgagacaaagatgaacaatattcaatgactatatgtctaagattttgtaaacaaaccaagcgtttcggaagacaactcagtgaat |
351 |
Q |
| |
|
||||| |||||||| ||||||||||| ||| ||||||||||||||||||||||||||||| ||| |||||||||| || |||||||||||| | |
|
|
| T |
30749315 |
atgttaggaaacatgagagacaaagatttacatctgtcaatgactatatgtctaagattttgtaagcaagccaagcgttttgggagacaactcagtttac |
30749414 |
T |
|
| Q |
352 |
cacacttttttattttcaagatttccagtttttgtaagttgtaaattgagttaggcaacttttttatatcaagagaacgaagttccaaataccttaaatg |
451 |
Q |
| |
|
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30749415 |
gacagcgttttattttcaagatttccagtttttgtaagttgtaaattgagttaggcaacttttttatatcaagagaacgaagttccaaataccttaaatg |
30749514 |
T |
|
| Q |
452 |
aattaaactacctagtaatggc-tctcggataaaggttatgcgtaaaacccgaagagaaaggtttgttgggaagtaatcatgtttttcttttgaccaagt |
550 |
Q |
| |
|
||||||||| |||||| ||||| ||| ||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || | |
|
|
| T |
30749515 |
aattaaactccctagtgatggcatct-ggataaaggatgtgcgtaaaacccgaagagaaaggtttgttgggaagtaatcatgtttttcttttgacaaaat |
30749613 |
T |
|
| Q |
551 |
actacaaaactcaaaccatgttcgcaaggattcaactattttgaaagcatccttgtcgaaggataacaagtctttagtgtcaaaactaatgtggtgtgtg |
650 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| ||||||||||||| ||||||||| |
|
|
| T |
30749614 |
actacacaactcaaaccatgttcgcaaggattcaactattttgaaagcatccttgtcgaaggataacgagtcgttattgtcaaaactaatatggtgtgtg |
30749713 |
T |
|
| Q |
651 |
ctttttgacaaactagtcaagtttgcattctccaaatacatacattcttgccccattactgattgagcaagatcatggacaagatcatgcatcttgaatg |
750 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
30749714 |
cttttcgacaaactagtcaagtttgcattctccaaatacatacattcttgccccattactgattgagcaagatcatggacaagatcatgaatcttgaatg |
30749813 |
T |
|
| Q |
751 |
aaatgtcgccagaaaattcatccatttttctatcttgaaagaatgatttttggtacaattcatcccacaccatgatgccagcatcttcaacctccgtatt |
850 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| |||||||||||||| |||| |
|
|
| T |
30749814 |
aaatgtcgccagaaaattcatccatttttctatcttgaaagaatgatttttgatacaattcatcccaaaccatgatgccaacatcttcaacctccatatt |
30749913 |
T |
|
| Q |
851 |
acccctagatgaaatcaatccattagccatccaaagccaaatcaattcttcctttaggatttctgcatctttgggaaatatagcacaaaaagagaaacat |
950 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30749914 |
acccctagatgaaatcaatccattagccatccaaagccaaatcaatttttcctttaggatttctgcatctttgggaaatatagcacaaaaagagaaacat |
30750013 |
T |
|
| Q |
951 |
tgttttagggctgccggtaaataaaagtaactcaacctcaaagcaggcaaaatggaattttcatctgataaatcccaaagttcactgtctttaattttaa |
1050 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
30750014 |
tgttttagggctgccggtaaataaaagtaactcaacctcaaagcaggcaaaatggaattttcatctgataaatcccaaagttcactatctttaattttaa |
30750113 |
T |
|
| Q |
1051 |
gccattccttttcatctttccttgagttcattaaacttcccaatgattttgctgcaagaggcaatccattgcatttctttactatctcctttcctattgc |
1150 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
30750114 |
gccattccttttcatctttccttgagttcattaaacttcccaatgcttttgctgcaagaggcaatccattacatttctttactatctcctttcctattgc |
30750213 |
T |
|
| Q |
1151 |
cacgagatcagcacgctcttctttgtgatgtcca |
1184 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||| |
|
|
| T |
30750214 |
cacgagatcagcacgctcttctttgtaatgtcca |
30750247 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 652; E-Value: 0
Query Start/End: Original strand, 51 - 1172
Target Start/End: Original strand, 30399548 - 30400666
Alignment:
| Q |
51 |
tcccatgacaagcataattcatgaaggtcttttttacccatcaaattagccgtttcagcttcagataaactaccaacattgtttaatcctttgatactca |
150 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||| ||||| || ||||| ||||||||| |||| || ||||| |||| ||||| || |
|
|
| T |
30399548 |
tcccatgacaagcataattcatgaaggtcttttttacccatcaaatcagccgcttgagcttgagataaactgccaaaatcttttaagccttcgatacgca |
30399647 |
T |
|
| Q |
151 |
gttttccaccgaggtttagatcacgtaactctgtcaagctattccctctctctaaactaacaatgtacacacttaatgttcttagacaagttaattttcc |
250 |
Q |
| |
|
||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||| |||||| |||||||||||| |
|
|
| T |
30399648 |
gttttccaccgaggtttagatcacgtaactctgacaagctattccctttctctaaactaacaatgtacacacttaatgtttttagactagttaattttcc |
30399747 |
T |
|
| Q |
251 |
aatgttgggaaacatacgagacaaagatgaacaatattcaatgactatatgtctaagattttgtaaacaaaccaagcgtttcggaagacaactcagtgaa |
350 |
Q |
| |
|
|||||| |||||||| |||||||||||| |||||||||||| ||||||||||||||||||||||| || |||||||||| || |||||| ||||| | |
|
|
| T |
30399748 |
aatgttaggaaacattcgagacaaagatatacaatattcaataactatatgtctaagattttgtaagaaagccaagcgttttgggagacaaatcagttca |
30399847 |
T |
|
| Q |
351 |
tcacacttttttattttcaagatttccagtttttgtaagttgtaaattgagttaggcaacttttttatatcaagagaacgaagttccaaataccttaaat |
450 |
Q |
| |
|
|||| | ||||||||||||| |||||||||||||||||||||||||||||| |||||||| || ||| |||||| || |||| |||||||||||||||| |
|
|
| T |
30399848 |
ccacaatgttttattttcaaggtttccagtttttgtaagttgtaaattgagtcaggcaactcttgtatgtcaagataaagaagctccaaataccttaaat |
30399947 |
T |
|
| Q |
451 |
gaattaaactacctagtaatggctctcggataaaggttatgcgtaaaacccgaagagaaaggtttgttgggaagtaatcatgtttttcttttgaccaagt |
550 |
Q |
| |
|
||||||||||||||||||||||| | |||||||||||| ||| |||||||||||||||| ||| ||||||||||||||| |||| |||||||| |||| |
|
|
| T |
30399948 |
gaattaaactacctagtaatggcccccggataaaggttgtgcataaaacccgaagagaagggtctgttgggaagtaatcctgttcttcttttggaaaagt |
30400047 |
T |
|
| Q |
551 |
actacaaaactcaaaccatgttcgcaaggattcaactattttgaaagcatccttgtcgaaggataacaagtctttagtgtcaaaactaatgtggtgtgtg |
650 |
Q |
| |
|
| |||||||||||||||||||||||||||||||| || |||| ||| ||| ||||| |||||||| | | || || |||||| |||||||||||| |
|
|
| T |
30400048 |
ag---aaaactcaaaccatgttcgcaaggattcaacttttctgaaggcaccctcatcgaatgataacaaattatcagagttaaaacttatgtggtgtgtg |
30400144 |
T |
|
| Q |
651 |
ctttttgacaaactagtcaagtttgcattctccaaatacatacattcttgccccattactgattgagcaagatcatggacaagatcatgcatcttgaatg |
750 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||| | ||| ||||||||||||||||||||||||||||||| |
|
|
| T |
30400145 |
ctttttgacaaactagtcatgtttgcattctccaaatatatacattcttgccccattactgacttagcgagatcatggacaagatcatgcatcttgaatg |
30400244 |
T |
|
| Q |
751 |
aaatgtcgccagaaaattcatccatttttctatcttgaaagaatgatttttggtacaattcatcccacaccatgatgccagcatcttcaacctccgtatt |
850 |
Q |
| |
|
|||||| |||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||| |
|
|
| T |
30400245 |
aaatgttgccagaaaattcatccatttttttgtcttgaaagaatgatttttggtacaattcatcccaaaccatgatgccaacatcttcaacctccgtatt |
30400344 |
T |
|
| Q |
851 |
acccctagatgaaatcaatccattagccatccaaagccaaatcaattcttcctttaggatttctgcatctttgggaaatatagcacaaaaagagaaacat |
950 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||| |||||||||||| || | |||||| ||| |||||||||||||||||||||||||||||| |
|
|
| T |
30400345 |
accccaagatgaaatcaatccattagccatccaaagctgaatcaattcttctttcaagatttccctatccttgggaaatatagcacaaaaagagaaacat |
30400444 |
T |
|
| Q |
951 |
tgttttagggctgccggtaaataaaagtaactcaacctcaaagcaggcaaaatggaattttcatctgataaatcccaaagttcactgtctttaattttaa |
1050 |
Q |
| |
|
|| ||||||| | | |||||||||||||||||||||||||| | ||||||| ||||||| |||| |||| ||||||| ||| |||||||||| | || |
|
|
| T |
30400445 |
tgctttagggtcggtgttaaataaaagtaactcaacctcaaagaacgcaaaatataattttcttctggtaaagcccaaagctcagtgtctttaatatcaa |
30400544 |
T |
|
| Q |
1051 |
gccattccttttcatctttccttgagttcattaaacttcccaatgattttgctgcaagaggcaatccattgcatttctttactatctcctttcctattgc |
1150 |
Q |
| |
|
||||||||||||| | ||||||||| |||| |||| |||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
30400545 |
gccattccttttctccattccttgagctcatcaaacctcccaatgcttttgctgcaagaggcaatccattacatttctttactatctcctttcctattgc |
30400644 |
T |
|
| Q |
1151 |
cacgagatcagcacgctcttct |
1172 |
Q |
| |
|
|| || || |||||||||||| |
|
|
| T |
30400645 |
tacaagttctgcacgctcttct |
30400666 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 574; E-Value: 0
Query Start/End: Original strand, 57 - 1153
Target Start/End: Original strand, 30435299 - 30436389
Alignment:
| Q |
57 |
gacaagcataattcatgaaggtcttttttacccatcaaattagccgtttcagcttcagataaactaccaacattgtttaatcctttgatactcagttttc |
156 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30435299 |
gacaagcataattcatgaaggtcttttttacccttcaaattagccgcttcagcttcagataaactaccaacattgtttaatcctttgatactcagttttc |
30435398 |
T |
|
| Q |
157 |
caccgaggtttagatcacgtaactctgtcaagctattccctctctctaaactaacaatgtacacacttaatgttcttagacaagttaattttccaatgtt |
256 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30435399 |
caccgaggtttagatcatgtaactctgtcaagctatttcctttctctaaactaacaatgtacacacttaatgttcttagacaagttaattttccaatgtt |
30435498 |
T |
|
| Q |
257 |
gggaaacatacgagacaaagatgaacaatattcaatgactatatgtctaagattttgtaaacaaaccaagcgtttcggaagacaactcagtgaatcacac |
356 |
Q |
| |
|
||||||||| ||| | |||||| ||| |||||||||||||||||||||||||||||| |||||||||||||| || |||||||||||| | ||| |
|
|
| T |
30435499 |
gggaaacattcgaaataaagatccacatccttcaatgactatatgtctaagattttgtaagcaaaccaagcgttttgggagacaactcagttcacgacaa |
30435598 |
T |
|
| Q |
357 |
ttttttattttcaagatttccagtttttgtaagttgtaaattgagttaggcaacttttttatatcaagagaacgaagttccaaataccttaaatgaatta |
456 |
Q |
| |
|
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
30435599 |
tattttattttcaagatttccagtttttgtaagttgtaaattgagttaggcaacttttttatatcaagagaacaaagttccaaataccttaaatgaatta |
30435698 |
T |
|
| Q |
457 |
aactacctagtaatggctctcggataaaggttatgcgtaaaacccgaagagaaaggtttgttgggaagtaatcatgtttttcttttgacca-agtactac |
555 |
Q |
| |
|
|||| | || ||| || | | | ||| | ||| |||||| |||||||| |||| |||||||| |||||||||| ||| || | | | || | |
|
|
| T |
30435699 |
aactcc---atactgggccttgtagagaggatgtgcttaaaactcgaagagagctgtttaatgggaagtgatcatgtttt--tttggaatataattctcc |
30435793 |
T |
|
| Q |
556 |
aaaactcaaaccatgttcgcaaggattcaactattttgaaagcatccttgtcgaaggataacaagtctttagtgtcaaaactaatgtggtgtgtgctttt |
655 |
Q |
| |
|
|| |||||| ||||||| |||||||||||| ||||||| ||| ||| ||||| |||||||| | || || || |||||| |||||||||||| |||| |
|
|
| T |
30435794 |
--aagtcaaacaatgttcgtaaggattcaacttttttgaaggcaccctcatcgaatgataacaaattttcagagttaaaacttatgtggtgtgtgttttt |
30435891 |
T |
|
| Q |
656 |
tgacaaactagtcaagtttgcattctccaaatacatacattcttgccccattactgattgagcaagatcatggacaagatcatgcatcttgaatgaaatg |
755 |
Q |
| |
|
|| |||| |||||| ||||||||||||||||||||||||||||| |||| ||||||||||||| ||||||||||||||||||||||||||||| |||||| |
|
|
| T |
30435892 |
tgtcaaattagtcatgtttgcattctccaaatacatacattctttccccgttactgattgagcgagatcatggacaagatcatgcatcttgaaagaaatg |
30435991 |
T |
|
| Q |
756 |
tcgccagaaaattcatccatttttctatcttgaaagaatgatttttggtacaattcatcccacaccatgatgccagcatcttcaacctccgtattacccc |
855 |
Q |
| |
|
|| ||| || |||||||||| || |||||||||||||||||||||||||||||||| | ||| ||||| | ||| |||||||||| ||| ||||||| |
|
|
| T |
30435992 |
tctccaaaatattcatccatcttgctatcttgaaagaatgatttttggtacaattccttccaaaccatttttccaacatcttcaacgtccaaattaccca |
30436091 |
T |
|
| Q |
856 |
tagatgaaatcaatccattagccatccaaagccaaatcaattcttcctttaggatttctgcatctttgggaaatatagcacaaaaagagaaacattgttt |
955 |
Q |
| |
|
|||||||||| ||| |||||||||||||||| | |||||||||||| |||||||||||| ||| |||||||||||||||||||||||||||||||| || |
|
|
| T |
30436092 |
tagatgaaataaattcattagccatccaaagtcgaatcaattcttcttttaggatttctctatccttgggaaatatagcacaaaaagagaaacattgctt |
30436191 |
T |
|
| Q |
956 |
tagggctgccggtaaataaaagtaactcaacctcaaagcaggcaaaatggaattttcatctgataaatcccaaagttcactgtctttaattttaagccat |
1055 |
Q |
| |
|
||||| || | |||||||||||||||||| |||||||| |||||||| |||||||| | || |||| ||||||| |||||||||||||| | ||||||| |
|
|
| T |
30436192 |
tagggttggtgttaaataaaagtaactcaatctcaaagcgggcaaaatagaattttcttgtggtaaagcccaaagctcactgtctttaatatcaagccat |
30436291 |
T |
|
| Q |
1056 |
tccttttcatctttccttgagttcattaaacttcccaatgattttgctgcaagaggcaatccattgcatttctttactatctcctttcctattgccac |
1153 |
Q |
| |
|
|||||||| || ||||||||| |||| |||| ||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| ||| |||| |
|
|
| T |
30436292 |
tccttttcttcattccttgagctcatcaaaccccccaatgcttttgctgcaagaggcaatccattacatttctttactatctcctttccaatttccac |
30436389 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 563; E-Value: 0
Query Start/End: Original strand, 53 - 1148
Target Start/End: Complemental strand, 30243002 - 30241919
Alignment:
| Q |
53 |
ccatgacaagcataattcatgaaggtcttttttacccatcaaattagccgtttcagcttcagataaactaccaacattgtttaatcctttgatactcagt |
152 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||| || |||||||||| |
|
|
| T |
30243002 |
ccatgacaagcataattcatgaaggtcttttttacccatcaaattagccgcttcagcttcagataaactgccaacattgtttaagtgttggatactcagt |
30242903 |
T |
|
| Q |
153 |
tttccaccgaggtttagatcacgtaactctgtcaagctattccctctctctaaactaacaatgtacacacttaatgttcttagacaagttaattttccaa |
252 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30242902 |
tttccaccgaggtttagatcacgtaactctgtcaagctattccctttctctaaactaacaatatacacacttaatgttcttagacaagttaattttccaa |
30242803 |
T |
|
| Q |
253 |
tgttgggaaacatacgagacaaagatgaacaatattcaatgactatatgtctaagattttgtaaacaaaccaagcgtttcggaagacaactcagtgaatc |
352 |
Q |
| |
|
|||| |||||||| |||||||||| ||| | || ||||||||||||||||||||||||||| ||| ||||| |||| || |||||||||||| | |
|
|
| T |
30242802 |
tgttaggaaacatgagagacaaagaccgacattctttaatgactatatgtctaagattttgtaagcaagccaagtgttttgggagacaactcagtttacg |
30242703 |
T |
|
| Q |
353 |
acacttttttattttcaagatttccagtttttgtaagttgtaaattgagttaggcaacttttttatatcaagagaacgaagttccaaataccttaaatga |
452 |
Q |
| |
|
||| | ||||||||||||||||||||| |||| || |||||||||||||| |||||| ||||| || ||||||||||||||||||||||||||||||||| |
|
|
| T |
30242702 |
acaatgttttattttcaagatttccagcttttttaggttgtaaattgagtcaggcaaatttttgatgtcaagagaacgaagttccaaataccttaaatga |
30242603 |
T |
|
| Q |
453 |
attaaactacctagtaatggctctcggataaaggttatgcgtaaaacccgaagagaaaggtttgttgggaagtaatcatgtttttcttttgaccaagtac |
552 |
Q |
| |
|
|||||||| |||||| ||||| |||||||||| | ||| |||||||||||||||||||| ||||||||||| ||||||||||| ||||| | | || |
|
|
| T |
30242602 |
attaaactccctagtgatggcatccggataaaggatgtgcataaaacccgaagagaaaggtatgttgggaagttatcatgttttt-ttttggcataata- |
30242505 |
T |
|
| Q |
553 |
tacaaaactcaaaccatgttcgcaaggattcaactattttgaaagcatccttgtcgaaggataacaagtctttagtgtcaaaactaatgtggtgtgtgct |
652 |
Q |
| |
|
|| |||| |||| |||||| ||||||||||||| |||||||||||| ||| || ||||||||||||||||| |||||||| ||||||||||||||| |
|
|
| T |
30242504 |
-actcaactgaaacaatgttctcaaggattcaacttttttgaaagcattcttatcaaaggataacaagtctttgtagtcaaaaccaatgtggtgtgtgct |
30242406 |
T |
|
| Q |
653 |
ttttgacaaactagtcaagtttgcattctccaaatacatacattcttgccccattactgattgagcaagatcatggacaagatcatgcatcttgaatgaa |
752 |
Q |
| |
|
|||||||||||| |||| |||| ||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||| ||| |
|
|
| T |
30242405 |
ttttgacaaactggtcatgtttttgttctccaaatacatacattctggccccattactgattgagcgagatcatggacaagatcatgcatcttgaaagaa |
30242306 |
T |
|
| Q |
753 |
atgtcgccagaaaattcatccatttttctatcttgaaagaatgatttttggtacaattcatcccacaccatgatgccagcatcttcaacctccgtattac |
852 |
Q |
| |
|
||||| |||||| ||||||||||||| || |||||||| |||||||||||||||||||| | ||| |||||| | ||| |||||||||||| | ||| | |
|
|
| T |
30242305 |
atgtctccagaatattcatccattttgctgtcttgaaaaaatgatttttggtacaattccttccaaaccatgtttccaacatcttcaacct-ctaatttc |
30242207 |
T |
|
| Q |
853 |
ccctagatgaaatcaatccattagccatccaaagccaaatcaattcttcctttaggatttctgcatctttgggaaatatagcacaaaaagagaaacattg |
952 |
Q |
| |
|
| || || ||| |||||||||||||| || ||| ||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30242206 |
ctct--ttgcaataaatccattagccattcagagctgaatcaattcttccttcaggatttctccatctttgggaaatatagcacaaaaagagaaacattg |
30242109 |
T |
|
| Q |
953 |
ttttagggctgccggtaaataaaagtaactcaacctcaaagcaggcaaaatggaattttcatctgataaatcccaaagttcactgtctttaattttaagc |
1052 |
Q |
| |
|
|||||| | || | ||||||||||||||||||||||||||||||||||| |||| | || || ||||||| || || |||||||||| |||| |
|
|
| T |
30242108 |
ttttagagttggtgttaaataaaagtaactcaacctcaaagcaggcaaaa------tttcttgtggcaaggcccaaagctcgctatctttaatttcaagc |
30242015 |
T |
|
| Q |
1053 |
cattccttttcatctttccttgagttcattaaacttcccaatgattttgctgcaagaggcaatccattgcatttctttactatctcctttcctatt |
1148 |
Q |
| |
|
||||||| ||| || ||||||||| ||||||||| |||||||| ||| |||||||||||||||||||| ||||||||||| ||||||||||||||| |
|
|
| T |
30242014 |
cattcctcttcttcattccttgagctcattaaacctcccaatgctttcgctgcaagaggcaatccattacatttctttacaatctcctttcctatt |
30241919 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 556; E-Value: 0
Query Start/End: Original strand, 53 - 1153
Target Start/End: Complemental strand, 30714052 - 30712958
Alignment:
| Q |
53 |
ccatgacaagcataattcatgaaggtcttttttacccatcaaattagccgtttcagcttcagataaactaccaacattgtttaatcctttgatactcagt |
152 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
30714052 |
ccatgacaagtataattcatgaaggtcttttttacccatcaaattagccgcttcagcttcaaataaactgccaacattgtttaatcctttgatactcagt |
30713953 |
T |
|
| Q |
153 |
tttccaccgaggtttagatcacgtaactctgtcaagctattccctctctctaaactaacaatgtacacacttaatgttcttagacaagttaattttccaa |
252 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30713952 |
tttccaccgaggtttagatcacgtaactctgtcaagctattccctttctctaaactaacaatgtacacacttaatgttcttagacaagttaattttccaa |
30713853 |
T |
|
| Q |
253 |
tgttgggaaacatacgagacaaagatgaacaatattcaatgactatatgtctaagattttgtaaacaaaccaagcgtttcggaagacaactcagtgaatc |
352 |
Q |
| |
|
|||| |||||||| |||||||||||| ||| | |||||||||||||||||||||||||||||||||| |||||||||||||||| ||||| ||| || |
|
|
| T |
30713852 |
tgttaggaaacattcgagacaaagatcgacattcttcaatgactatatgtctaagattttgtaaacaagccaagcgtttcggaaggcaactaagtttatt |
30713753 |
T |
|
| Q |
353 |
acacttttttattttcaagatttccagtttttgtaagttgtaaattgagttaggcaacttttttatatcaagagaacgaagttccaaataccttaaatga |
452 |
Q |
| |
|
||| | |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||| ||| ||||||||||||||||||| |
|
|
| T |
30713752 |
acagtgttttattttcaagatttccagtttttgtaagttgtaaattgagtcaggcaacttttttatgccaagagaatgaatttccaaataccttaaatga |
30713653 |
T |
|
| Q |
453 |
attaaactacctagtaatggctctcggataaaggttatgcgtaaaacccgaagagaaaggtttgttgggaagtaatcatgtttttcttttgaccaagtac |
552 |
Q |
| |
|
|||||||| | || ||| | | | ||||| | ||| |||||| |||||||| |||| |||||||| ||||||||||| || | | | | |
|
|
| T |
30713652 |
attaaactcc---atactgggacctgtagaaaggatgtgcttaaaactcgaagagagctgtttaatgggaagtgatcatgttttt-ttgcaatataattc |
30713557 |
T |
|
| Q |
553 |
tacaaaactcaaaccatgttcgcaaggattcaactattttgaaagcatccttgtcgaaggataacaagtctttagtgtcaaaactaatgtggtgtgtgct |
652 |
Q |
| |
|
| | || |||||| ||||||| |||||||||||| ||||||| ||| ||| ||||| |||||||| | || || || |||||| |||||||||||| | |
|
|
| T |
30713556 |
tcc--aagtcaaacaatgttcgtaaggattcaacttttttgaaggcaccctcatcgaatgataacaatttttcagagtgaaaacttatgtggtgtgtgtt |
30713459 |
T |
|
| Q |
653 |
ttttgacaaactagtcaagtttgcattctccaaatacatacattcttgccccattactgattgagcaagatcatggacaagatcatgcatcttgaatgaa |
752 |
Q |
| |
|
||||| |||| |||||| |||||||||||||||||||| |||||||| |||| ||||||||||||| ||||||||||||||||||||||| || || ||| |
|
|
| T |
30713458 |
ttttgtcaaattagtcatgtttgcattctccaaatacacacattctttccccgttactgattgagcgagatcatggacaagatcatgcattttaaaagaa |
30713359 |
T |
|
| Q |
753 |
atgtcgccagaaaattcatccatttttctatcttgaaagaatgatttttggtacaattcatcccacaccatgatgccagcatcttcaacctccgtattac |
852 |
Q |
| |
|
|||| |||||| |||||||||| || | |||||| ||||||||||||||||||||||| | ||| |||||| | ||| |||||||||| ||| ||||| |
|
|
| T |
30713358 |
atgtttccagaatattcatccatcttgcaatcttggaagaatgatttttggtacaattccttccaaaccatgtttccaacatcttcaacgtccaaattac |
30713259 |
T |
|
| Q |
853 |
ccctagatgaaatcaatccattagccatccaaagccaaatcaattcttcctttaggatttctgcatctttgggaaatatagcacaaaaagagaaacattg |
952 |
Q |
| |
|
|| |||||||||| |||||||||||||||||||| | |||||||||||| |||||||||||| ||| |||||||||||||||||||||||||||||||| |
|
|
| T |
30713258 |
ccatagatgaaataaatccattagccatccaaagtcgaatcaattcttcttttaggatttctctatccttgggaaatatagcacaaaaagagaaacattg |
30713159 |
T |
|
| Q |
953 |
ttttagggctgccggtaaataaaagtaactcaacctcaaagcaggcaaaatggaattttcatctgataaatcccaaagttcactgtctttaattttaagc |
1052 |
Q |
| |
|
||||||| || | ||||||||||||||||| |||||||||||||||||| |||||||| | || |||| ||||||| |||||||||||||| | |||| |
|
|
| T |
30713158 |
ctttagggttggtgataaataaaagtaactcagcctcaaagcaggcaaaatagaattttcttgtggtaaagcccaaagctcactgtctttaatatcaagc |
30713059 |
T |
|
| Q |
1053 |
cattccttttcatctttccttgagttcattaaacttcccaatgattttgctgcaagaggcaatccattgcatttctttactatctcctttcctattgcca |
1152 |
Q |
| |
|
||||| ||||| || ||||||||| |||| |||| ||||||| |||||||||||| ||||||||||| ||||||||| ||||||||||||||||| ||| |
|
|
| T |
30713058 |
cattcattttcttcattccttgagctcatcaaaccccccaatgcttttgctgcaagtggcaatccattacatttctttgctatctcctttcctatttcca |
30712959 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 551; E-Value: 0
Query Start/End: Original strand, 53 - 1148
Target Start/End: Original strand, 29871659 - 29872742
Alignment:
| Q |
53 |
ccatgacaagcataattcatgaaggtcttttttacccatcaaattagccgtttcagcttcagataaactaccaacattgtttaatcctttgatactcagt |
152 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||| |||||||||| |
|
|
| T |
29871659 |
ccatgacaagcataattgatgaaggtcttttttacccatcaaattagccgcttcagcttcagataaactgccaacattgtttaatccttcgatactcagt |
29871758 |
T |
|
| Q |
153 |
tttccaccgaggtttagatcacgtaactctgtcaagctattccctctctctaaactaacaatgtacacacttaatgttcttagacaagttaattttccaa |
252 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
29871759 |
tttccaccgagttttagatcacgtaactctgtcaaactattccctttctctaaactaacaatgtacacacttaatgttcttaaacaagttaattttccaa |
29871858 |
T |
|
| Q |
253 |
tgttgggaaacatacgagacaaagatgaacaatattcaatgactatatgtctaagattttgtaaacaaaccaagcgtttcggaagacaactcagtgaatc |
352 |
Q |
| |
|
|||| |||||||||| |||||||||| ||| | |||||||||||||||||||||||||||||||||| |||||||||||||||| || || ||| ||| |
|
|
| T |
29871859 |
tgttaggaaacatactagacaaagatcgacattcttcaatgactatatgtctaagattttgtaaacaagccaagcgtttcggaagccagctaagtttatc |
29871958 |
T |
|
| Q |
353 |
acacttttttattttcaagatttccagtttttgtaagttgtaaattgagttaggcaacttttttatatcaagagaacgaagttccaaataccttaaatga |
452 |
Q |
| |
|
||| | ||||||||||||||||||||| |||| || ||||||||||||| ||||||||||||||| |||||| |||||||| ||||||||||||||||| |
|
|
| T |
29871959 |
acagtattttattttcaagatttccagcttttttagattgtaaattgagtcaggcaacttttttatgtcaagaaaacgaagtcccaaataccttaaatga |
29872058 |
T |
|
| Q |
453 |
attaaactacctagtaatggctctcggataaaggttatgcgtaaaacccgaagagaaaggtttgttgggaagtaatcatgtttttcttttgaccaagtac |
552 |
Q |
| |
|
|||||||| || ||| ||||| |||||||||| | || ||||||||| |||||||| | || |||||||| |||||||||| ||||| ||| |
|
|
| T |
29872059 |
attaaactccccagtgatggcatccggataaaggatgcgcataaaacccggagagaaagatatgctgggaagttatcatgtttt--ttttg-----gtaa |
29872151 |
T |
|
| Q |
553 |
tacaaaactcaaaccatgttcgcaaggattcaactattttgaaagcatccttgtcgaaggataacaagtctttagtgtcaaaactaatgtggtgtgtgct |
652 |
Q |
| |
|
| | ||||| ||| |||||| ||||||||||||| |||||||||||| | || |||||||||| |||| ||||| | ||||||||||||||| |
|
|
| T |
29872152 |
ga-ataactc-aacaatgttctcaaggattcaacttttttgaaagcattttcatcaaaggataaca---ctttgtagtcaacaacaatgtggtgtgtgct |
29872246 |
T |
|
| Q |
653 |
ttttgacaaactagtcaagtttgcattctccaaatacatacattcttgccccattactgattgagcaagatcatggacaagatcatgcatcttgaatgaa |
752 |
Q |
| |
|
|||||||||||| |||| |||| |||||||||| |||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||| ||| |
|
|
| T |
29872247 |
ttttgacaaactggtcatgtttttgttctccaaatgcatacattcttgccccattattgattgagcgagatcatggacaagatcatgcatcttgaaagaa |
29872346 |
T |
|
| Q |
753 |
atgtcgccagaaaattcatccatttttctatcttgaaagaatgatttttggtacaattcatcccacaccatgatgccagcatcttcaacctccgtattac |
852 |
Q |
| |
|
||||| |||||| |||||||||| || | |||||||||||||||||||||||||||||| | ||| |||||| | ||| |||||||||| ||| ||||| |
|
|
| T |
29872347 |
atgtctccagaatattcatccatcttgccatcttgaaagaatgatttttggtacaattccttccaaaccatgtttccaacatcttcaacgtccaaattac |
29872446 |
T |
|
| Q |
853 |
ccctagatgaaatcaatccattagccatccaaagccaaatcaattcttcctttaggatttctgcatctttgggaaatatagcacaaaaagagaaacattg |
952 |
Q |
| |
|
|| |||||||||| ||| |||||||||||||||| |||||||||||| || ||||||| | ||| |||||||||||||| ||||||||||||||||| |
|
|
| T |
29872447 |
ccatagatgaaataaattcattagccatccaaagttgaatcaattcttctttcaggatttttctatccttgggaaatatagcgcaaaaagagaaacattg |
29872546 |
T |
|
| Q |
953 |
ttttagggctgccggtaaataaaagtaactcaacctcaaagcaggcaaaatggaattttcatctgataaatcccaaagttcactgtctttaattttaagc |
1052 |
Q |
| |
|
||||||| || | |||||||||||||||||||||||||||| ||||||| |||||||| | |||||| ||||||| |||||||| ||||| | |||| |
|
|
| T |
29872547 |
ctttagggttggtgttaaataaaagtaactcaacctcaaagcaagcaaaatagaattttcttgcgataaagcccaaagctcactgtccttaatatcaagc |
29872646 |
T |
|
| Q |
1053 |
cattccttttcatctttccttgagttcattaaacttcccaatgattttgctgcaagaggcaatccattgcatttctttactatctcctttcctatt |
1148 |
Q |
| |
|
||||||||||| || ||||||||| |||| |||| |||||||| |||||||||||||||||||||||| ||||||||||| ||||||||||||||| |
|
|
| T |
29872647 |
cattccttttcttcattccttgagctcatcaaacctcccaatgcttttgctgcaagaggcaatccattacatttctttacaatctcctttcctatt |
29872742 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 487; E-Value: 0
Query Start/End: Original strand, 52 - 876
Target Start/End: Complemental strand, 30677799 - 30676978
Alignment:
| Q |
52 |
cccatgacaagcataattcatgaaggtcttttttacccatcaaattagccgtttcagcttcagataaactaccaacattgtttaatcctttgatactcag |
151 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| ||||||| ||||||| ||||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
30677799 |
cccatgacaagcataattcatgaaggtcttttttatccatcaatttagccgcttcagcttcagataaactagcaacattgtttaatcctttgatactcag |
30677700 |
T |
|
| Q |
152 |
ttttccaccgaggtttagatcacgtaactctgtcaagctattccctctctctaaactaacaatgtacacacttaatgttcttagacaagttaattttcca |
251 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| | |
|
|
| T |
30677699 |
ttttccactgaggtttagatcacgtaactctgtcaagctattccctttctctaaactaacaatgtacacacttaatgttcttaaacaagttaattttcta |
30677600 |
T |
|
| Q |
252 |
atgttgggaaacatacgagacaaagatgaacaatattcaatgactatatgtctaagattttgtaaacaaaccaagcgtttcggaagacaactcagtgaat |
351 |
Q |
| |
|
||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||| ||||| || || ||| || |
|
|
| T |
30677599 |
atgttaggaaacatacgagacaaagattcacaatattcaatgactatatgtctaagattttgtaaacaagccaagcgttttggaagccagctaagtttat |
30677500 |
T |
|
| Q |
352 |
cacacttttttattttcaagatttccagtttttgtaagttgtaaattgagttaggcaacttttttatatcaagagaacgaagttccaaataccttaaatg |
451 |
Q |
| |
|
|||| | ||||||||||||||||||||| |||| || |||||||||||||| ||||||| | ||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
30677499 |
cacagtgttttattttcaagatttccagcttttttaggttgtaaattgagtcaggcaacatatttatgtcaagagaacgaagttccaaataccttaaatg |
30677400 |
T |
|
| Q |
452 |
aattaaactacctagtaatggctctcggataaaggttatgcgtaaaacccgaagagaaaggtttgttgggaagtaatcatgtttttcttttgaccaagta |
551 |
Q |
| |
|
||||||||| |||||| ||||| |||||||||| | ||| |||||||||||||||||||| |||||||||| |||||||||||| ||| || || | |
|
|
| T |
30677399 |
aattaaactccctagtgatggcatccggataaaggatgtgcataaaacccgaagagaaaggtatgttgggaagaaatcatgtttttttttggaataataa |
30677300 |
T |
|
| Q |
552 |
ctacaaaactcaaaccatgttcgcaaggattcaactattttgaaagcatccttgtcgaaggataacaagtctttagtgtcaaaactaatgtggtgtgtgc |
651 |
Q |
| |
|
|| |||| |||| |||||| ||||||||||||| |||||||||||| ||| || ||||||||||||||||| |||||||| |||||||||||||| |
|
|
| T |
30677299 |
ct---caactgaaacaatgttctcaaggattcaacttttttgaaagcattcttatcaaaggataacaagtctttgaggtcaaaaccaatgtggtgtgtgc |
30677203 |
T |
|
| Q |
652 |
tttttgacaaactagtcaagtttgcattctccaaatacatacattcttgccccattactgattgagcaagatcatggacaagatcatgcatcttgaatga |
751 |
Q |
| |
|
||||||||||||| |||| |||| ||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||||||||| || || |
|
|
| T |
30677202 |
tttttgacaaactggtcatgttttttttctccaaatacatacattctggccccattactaattgagcgagatcatggacaagatcatgcatcttaaaaga |
30677103 |
T |
|
| Q |
752 |
aatgtcgccagaaaattcatccatttttctatcttgaaagaatgatttttggtacaattcatcccacaccatgatgccagcatcttcaacctccgtatta |
851 |
Q |
| |
|
|||||| |||||| |||||||||| ||||||||||||||||||||||||||||||||||| | ||| ||| || | ||| |||| ||||| ||| |||| |
|
|
| T |
30677102 |
aatgtctccagaatattcatccatctttctatcttgaaagaatgatttttggtacaattccttccaaaccgtgtttccaacatcatcaacgtccaaatta |
30677003 |
T |
|
| Q |
852 |
cccctagatgaaatcaatccattag |
876 |
Q |
| |
|
||| |||||||||| |||||||||| |
|
|
| T |
30677002 |
cccatagatgaaataaatccattag |
30676978 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 460; E-Value: 0
Query Start/End: Original strand, 63 - 1172
Target Start/End: Original strand, 30206008 - 30207114
Alignment:
| Q |
63 |
cataattcatgaaggtcttttttacccatcaaattagccgtttcagcttcagataaactaccaacattgtttaatcctttgatactcagttttccaccga |
162 |
Q |
| |
|
|||||||| || ||||||||||||||||||||||| || | || ||||||||||||||||| ||||| ||||| ||||||||||| |||||||| || | |
|
|
| T |
30206008 |
cataattcctggaggtcttttttacccatcaaattggctgcttgagcttcagataaactacaaacatcatttaaacctttgatacttagttttcctccca |
30206107 |
T |
|
| Q |
163 |
ggtttagatcacgtaactctgtcaagctattccctctctctaaactaacaatgtacacacttaatgttcttagacaagttaattttccaatgttgggaaa |
262 |
Q |
| |
|
|||||||||| ||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||| |
|
|
| T |
30206108 |
ggtttagatcgtgtaactctgccaagctattccctttctctaaactaacaatgtacacacttaatgttcttagacaggttaattttccaatgtatggaaa |
30206207 |
T |
|
| Q |
263 |
catacgagacaaagatgaacaatattcaatgactatatgtctaagattttgtaaacaaaccaagcgtttcggaagacaactcagtgaatcacactttttt |
362 |
Q |
| |
|
||| || |||| || |||| || |||||| | |||||| ||||| ||||||||| |||||| |||||||||||| || ||| | ||| | |||| |
|
|
| T |
30206208 |
catgtgaaacaatgaatggcaatctttaatgacaagatgtctgagattctgtaaacaagccaagcctttcggaagacagctaagtttttgacaatctttt |
30206307 |
T |
|
| Q |
363 |
attttcaagatttccagtttttgtaagttgtaaattgagttaggcaacttttttatatcaagagaacgaagttccaaataccttaaatgaattaaactac |
462 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| |||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
30206308 |
attttcaagatttccagtttttgtaagttgtaaattgagtccggcaacatttttatttcaagagaacgaagttccaaataccttaaatgaattaaactcc |
30206407 |
T |
|
| Q |
463 |
ctagtaatggctctcggataaaggttatgcgtaaaacccgaagagaaaggtttgttgggaagtaatcatgtttttcttttgaccaagtactacaaaactc |
562 |
Q |
| |
|
||||| |||| | ||||||||| | ||| |||||||||||| ||| |||||||||| |||||||||||||| ||| | || | | |||| |
|
|
| T |
30206408 |
ctagtgatggtacctggataaaggatgtgcataaaacccgaagggaacggtttgttggcgagtaatcatgttttgttttggtgtaatgattc---aactg |
30206504 |
T |
|
| Q |
563 |
aaaccatgttcgcaaggattcaactattttgaaagcatccttgtcgaaggataacaagtctttagtgtcaaaactaatgtggtgtgtgctttttgacaaa |
662 |
Q |
| |
|
|||| |||||| ||||||||||||| | |||| ||| ||| |||||| ||||||| ||| | | || |||||| |||||||||||||||||||||||| |
|
|
| T |
30206505 |
aaacaatgttctcaaggattcaactttcctgaaggcaccctcgtcgaatgataacacgtcatcatagtgaaaacttatgtggtgtgtgctttttgacaaa |
30206604 |
T |
|
| Q |
663 |
ctagtcaagtttgcattctccaaatacatacattcttgccccattactgattgagcaagatcatggacaagatcatgcatcttgaatgaaatgtcgccag |
762 |
Q |
| |
|
|||||| ||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||| |
|
|
| T |
30206605 |
gtagtcatgtttgaattctccaaatacatacattcttgacccattactgattgagcaagatcatggacaagatcatgcatcttgaaagaaatgtctccag |
30206704 |
T |
|
| Q |
763 |
aaaattcatccatttttctatcttgaaagaatgatttttggtacaattcatcccacaccatgatgccagcatcttcaacctccgtattacccctagatga |
862 |
Q |
| |
|
|| | ||||| || | ||||||||||| ||||||||| ||||||||| ||| |||||| ||||| |||||||||||||| |||| |||||||| | |
|
|
| T |
30206705 |
aaccgttgtccatcttgatgtcttgaaagaaagatttttggcacaattcattccaaaccatgctgccaacatcttcaacctccatattttccctagataa |
30206804 |
T |
|
| Q |
863 |
aatcaatccattagccatccaaagccaaatcaattcttcctttaggatttctgcatctttgggaaatatagcacaaaaagagaaacattgttttagggct |
962 |
Q |
| |
|
||| ||| |||||||||||||||| ||||||||||||| | | || ||||| |||||||||||| ||||||||||||| |||||| | |||| || | |
|
|
| T |
30206805 |
aataaattcattagccatccaaagatgaatcaattcttccctcacgaattctgtatctttgggaaacatagcacaaaaagcgaaacaccgctttaaggtt |
30206904 |
T |
|
| Q |
963 |
gccggtaaataaaagtaactcaacctcaaagcaggcaaaatggaattttcatctgataaatcccaaagttcactgtctttaattttaagccattcctttt |
1062 |
Q |
| |
|
| | ||||| |||||| ||||||||||||||||| ||||| |||| |||| || |||| ||||||||||||| |||||||||| ||||||||| |||| |
|
|
| T |
30206905 |
ggagttaaatgaaagtagctcaacctcaaagcaggtaaaatataattctcatgtggtaaagcccaaagttcactctctttaatttcaagccattcttttt |
30207004 |
T |
|
| Q |
1063 |
catctttccttgagttcattaaacttcccaatgattttgctgcaagaggcaatccattgcatttctttactatctcctttcctattgccacgagatcagc |
1162 |
Q |
| |
|
| || |||||||| |||||| || |||||||| || |||||||||||||||||||| ||||||||||||||||||||||||||| |||| || || || |
|
|
| T |
30207005 |
cttcattccttgaactcattagacctcccaatgcttgtgctgcaagaggcaatccatcacatttctttactatctcctttcctatttccacaagctctgc |
30207104 |
T |
|
| Q |
1163 |
acgctcttct |
1172 |
Q |
| |
|
|||||||||| |
|
|
| T |
30207105 |
acgctcttct |
30207114 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 302; E-Value: 1e-169
Query Start/End: Original strand, 568 - 1153
Target Start/End: Original strand, 29853299 - 29853884
Alignment:
| Q |
568 |
atgttcgcaaggattcaactattttgaaagcatccttgtcgaaggataacaagtctttagtgtcaaaactaatgtggtgtgtgctttttgacaaactagt |
667 |
Q |
| |
|
|||||||||||||||||||| |||| || ||| ||| ||||| |||||||| | | | || |||||| ||||||||||||||||||| ||||||||| |
|
|
| T |
29853299 |
atgttcgcaaggattcaacttttttaaaggcaccctcatcgaatgataacaaattatcggagttaaaacttatgtggtgtgtgctttttgtcaaactagt |
29853398 |
T |
|
| Q |
668 |
caagtttgcattctccaaatacatacattcttgccccattactgattgagcaagatcatggacaagatcatgcatcttgaatgaaatgtcgccagaaaat |
767 |
Q |
| |
|
|| |||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||||| || |
|
|
| T |
29853399 |
catgtttgcattctccaaatacacacattcttgccccattactgattgagcgagatcatggacaagatcatgcatcttgaaaaaaatgtctccagagtat |
29853498 |
T |
|
| Q |
768 |
tcatccatttttctatcttgaaagaatgatttttggtacaattcatcccacaccatgatgccagcatcttcaacctccgtattacccctagatgaaatca |
867 |
Q |
| |
|
|||||||| || |||||||||||||||| |||||||||||||| | ||| ||||| | ||| |||||||||| ||| ||||||| |||||||||| | |
|
|
| T |
29853499 |
tcatccatcttgatatcttgaaagaatgacttttggtacaattccttccaaaccatatttccaacatcttcaacgtccaaattacccttagatgaaataa |
29853598 |
T |
|
| Q |
868 |
atccattagccatccaaagccaaatcaattcttcctttaggatttctgcatctttgggaaatatagcacaaaaagagaaacattgttttagggctgccgg |
967 |
Q |
| |
|
||||||||||||||||||| |||||||||||| || ||||||||| |||| |||||||||||||| ||||| ||||||||||||||||||| || | |
|
|
| T |
29853599 |
atccattagccatccaaagttgaatcaattcttctttcaggatttctccatccttgggaaatatagcgcaaaaggagaaacattgttttagggttggtgt |
29853698 |
T |
|
| Q |
968 |
taaataaaagtaactcaacctcaaagcaggcaaaatggaattttcatctgataaatcccaaagttcactgtctttaattttaagccattccttttcatct |
1067 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||| |||||||| | || |||| ||||||| |||||||||||||| | ||||||||||||||| || |
|
|
| T |
29853699 |
taaataaaagtaactcaacctcaaagcaagcaaaatagaattttcttgtggtaaagcccaaagctcactgtctttaatatcaagccattccttttcttca |
29853798 |
T |
|
| Q |
1068 |
ttccttgagttcattaaacttcccaatgattttgctgcaagaggcaatccattgcatttctttactatctcctttcctattgccac |
1153 |
Q |
| |
|
||||||||| |||| |||| |||||||| |||||||||||||||||||||||| ||||||||||| ||||||||||||||| |||| |
|
|
| T |
29853799 |
ttccttgagctcatcaaacctcccaatgtttttgctgcaagaggcaatccattacatttctttacaatctcctttcctatttccac |
29853884 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 287; E-Value: 1e-160
Query Start/End: Original strand, 561 - 1153
Target Start/End: Complemental strand, 30338647 - 30338058
Alignment:
| Q |
561 |
tcaaaccatgttcgcaaggattcaactattttgaaagcatccttgtcgaaggataacaagtctttagtgtcaaaactaatgtggtgtgtgctttttgaca |
660 |
Q |
| |
|
|||||| | |||||||||||||||||| |||||||||||| | ||||||||||| |||| || ||||||||| ||||||||||||||||||||||| |
|
|
| T |
30338647 |
tcaaacaaagttcgcaaggattcaacttttttgaaagcattttcatcgaaggataaaaagttgttgctgtcaaaaccaatgtggtgtgtgctttttgaca |
30338548 |
T |
|
| Q |
661 |
aactagtcaagtttgcattctccaaatacatacattcttgccccattactgattgagcaagatcatggacaagatcatgcatcttgaatgaaatgtcgcc |
760 |
Q |
| |
|
|| ||||| |||| |||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||| || |
|
|
| T |
30338547 |
aattagtcgtgtttttattctccaaacacatacattcttgccccattactgattgagcgagatcatggacaagatcatgcatcttgaaagaaatgtctcc |
30338448 |
T |
|
| Q |
761 |
agaaaattcatccatttttctatcttgaaagaatgatttttggtacaattcatcccacaccatgatgccagcatcttcaacctccgtattacccctagat |
860 |
Q |
| |
|
|||| |||||||||| || |||||||||||||| ||||||| ||||||||| | ||| |||||| | ||| ||||||||||||| ||| | | | | |
|
|
| T |
30338447 |
agaatattcatccatcttgctatcttgaaagaacgattttttgtacaattccttccaaaccatgtttccaacatcttcaacctctaaattcctctt---t |
30338351 |
T |
|
| Q |
861 |
gaaatcaatccattagccatccaaagccaaatcaattcttcctttaggatttctgcatctttgggaaatatagcacaaaaagagaaacattgttttaggg |
960 |
Q |
| |
|
| ||| |||||||||||||||||||| ||||||||||||||| ||||||||| |||||||||||||||||||||||| ||||||||||| ||||||| |
|
|
| T |
30338350 |
gcaataaatccattagccatccaaagttgaatcaattcttccttcaggatttctctatctttgggaaatatagcacaaaaggagaaacattgctttaggg |
30338251 |
T |
|
| Q |
961 |
ctgccggtaaataaaagtaactcaacctcaaagcaggcaaaatggaattttcatctgataaatcccaaagttcactgtctttaattttaagccattcctt |
1060 |
Q |
| |
|
|| | |||||||||||||||||| ||||||||||| ||||| || ||||||| || |||||||||||| |||||||||||||| | |||||||||||| |
|
|
| T |
30338250 |
ttggtgttaaataaaagtaactcaaactcaaagcaggtaaaatagatttttcatgtggtaaatcccaaagctcactgtctttaatatcaagccattcctt |
30338151 |
T |
|
| Q |
1061 |
ttcatctttccttgagttcattaaacttcccaatgattttgctgcaagaggcaatccattgcatttctttactatctcctttcctattgccac |
1153 |
Q |
| |
|
||| || ||| ||||| |||||||| ||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| ||| |||| |
|
|
| T |
30338150 |
ttcttcattcattgagaccattaaaccccccaatgcttttgctgcaagaggcaatccattacatttctttactatctcctttccaatttccac |
30338058 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 282; E-Value: 1e-157
Query Start/End: Original strand, 561 - 1144
Target Start/End: Original strand, 30483385 - 30483965
Alignment:
| Q |
561 |
tcaaaccatgttcgcaaggattcaactattttgaaagcatccttgtcgaaggataacaagtctttagtgtcaaaactaatgtggtgtgtgctttttgaca |
660 |
Q |
| |
|
|||||| |||||||||||||||||||| |||||||||||| | ||||||||||| || | || ||| ||||| ||||||||||||||||||||||| |
|
|
| T |
30483385 |
tcaaacaatgttcgcaaggattcaacttttttgaaagcattttcatcgaaggataaaaatttcttgctgttaaaaccaatgtggtgtgtgctttttgaca |
30483484 |
T |
|
| Q |
661 |
aactagtcaagtttgcattctccaaatacatacattcttgccccattactgattgagcaagatcatggacaagatcatgcatcttgaatgaaatgtcgcc |
760 |
Q |
| |
|
|| ||||| |||| |||||||||| || |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||| || |
|
|
| T |
30483485 |
aattagtcgtgtttttattctccaaacacgtacattcttgccccattactgattgagcgagatcatggacaagatcatgcatcttgaaagaaatgtctcc |
30483584 |
T |
|
| Q |
761 |
agaaaattcatccatttttctatcttgaaagaatgatttttggtacaattcatcccacaccatgatgccagcatcttcaacctccgtattacccctagat |
860 |
Q |
| |
|
|||| |||||||||| || |||||||||||||| |||||| ||||||||| | ||| |||||| | ||| ||||||||||||| ||| | | | | |
|
|
| T |
30483585 |
agaatattcatccatcttgctatcttgaaagaacgattttctgtacaattccttccaaaccatgtttccaacatcttcaacctctaaattcctctt---t |
30483681 |
T |
|
| Q |
861 |
gaaatcaatccattagccatccaaagccaaatcaattcttcctttaggatttctgcatctttgggaaatatagcacaaaaagagaaacattgttttaggg |
960 |
Q |
| |
|
| ||| ||||||||||||||||||||| ||||||||||||||| ||||||||| |||||||||||||||||||||||| ||||||||||| ||||||| |
|
|
| T |
30483682 |
gcaataaatccattagccatccaaagctgaatcaattcttccttcaggatttctctatctttgggaaatatagcacaaaaggagaaacattgctttaggg |
30483781 |
T |
|
| Q |
961 |
ctgccggtaaataaaagtaactcaacctcaaagcaggcaaaatggaattttcatctgataaatcccaaagttcactgtctttaattttaagccattcctt |
1060 |
Q |
| |
|
|| | |||||||||||||||||||||||||||||| ||||| || ||||||| || |||||||||||| |||||||||||||| | |||||||||||| |
|
|
| T |
30483782 |
ttggtgttaaataaaagtaactcaacctcaaagcaggtaaaatagatttttcatgtggtaaatcccaaagctcactgtctttaatatcaagccattcctt |
30483881 |
T |
|
| Q |
1061 |
ttcatctttccttgagttcattaaacttcccaatgattttgctgcaagaggcaatccattgcatttctttactatctcctttcc |
1144 |
Q |
| |
|
||| || ||| ||||| |||||||| ||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
30483882 |
ttcttcattcattgagaccattaaaccccccaatgcttttgctgcaagaggcaatccattacatttctttactatctcctttcc |
30483965 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 280; E-Value: 1e-156
Query Start/End: Original strand, 57 - 460
Target Start/End: Complemental strand, 30339151 - 30338748
Alignment:
| Q |
57 |
gacaagcataattcatgaaggtcttttttacccatcaaattagccgtttcagcttcagataaactaccaacattgtttaatcctttgatactcagttttc |
156 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||| || ||||||||||||||||||| |||| |||||||| |
|
|
| T |
30339151 |
gacaagcataattgatgaaggtcttttttacccatcaaattagccgcttcagcttcagataacctgccaacattgtttaatccttggatatgcagttttc |
30339052 |
T |
|
| Q |
157 |
caccgaggtttagatcacgtaactctgtcaagctattccctctctctaaactaacaatgtacacacttaatgttcttagacaagttaattttccaatgtt |
256 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
30339051 |
caccgaggtttagatcacgtaactctgtcaagctattccctttctctaaactaacaatgtacacacttaatgttcttagacaagataattttccaatgtt |
30338952 |
T |
|
| Q |
257 |
gggaaacatacgagacaaagatgaacaatattcaatgactatatgtctaagattttgtaaacaaaccaagcgtttcggaagacaactcagtgaatcacac |
356 |
Q |
| |
|
|||||||| |||||||||| ||| | ||||||||||||||| |||||||||||||| ||| |||||||||| ||||||||||||||| |||||| |
|
|
| T |
30338951 |
aggaaacattagagacaaagaccgacattcttcaatgactatatgcctaagattttgtaagcaagccaagcgttttggaagacaactcagtttatcacaa |
30338852 |
T |
|
| Q |
357 |
ttttttattttcaagatttccagtttttgtaagttgtaaattgagttaggcaacttttttatatcaagagaacgaagttccaaataccttaaatgaatta |
456 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||| || |||||||||||||||||||||||||| |
|
|
| T |
30338851 |
cgttttattttcaagatttccagtttttgtaagttgtaaattgagttaggcaacttttctatgtcaagataagtaagttccaaataccttaaatgaatta |
30338752 |
T |
|
| Q |
457 |
aact |
460 |
Q |
| |
|
|||| |
|
|
| T |
30338751 |
aact |
30338748 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #14
Raw Score: 276; E-Value: 1e-154
Query Start/End: Original strand, 53 - 460
Target Start/End: Original strand, 30482877 - 30483284
Alignment:
| Q |
53 |
ccatgacaagcataattcatgaaggtcttttttacccatcaaattagccgtttcagcttcagataaactaccaacattgtttaatcctttgatactcagt |
152 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| || ||||||||||||||||||| |||| |||| |
|
|
| T |
30482877 |
ccatgacaagcataattcatgaaggtcttttttacccatcaaattagccgcttcagcttcagataacctgccaacattgtttaatccttggatatgcagt |
30482976 |
T |
|
| Q |
153 |
tttccaccgaggtttagatcacgtaactctgtcaagctattccctctctctaaactaacaatgtacacacttaatgttcttagacaagttaattttccaa |
252 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30482977 |
tttccaccgaggtttagatcacgtaactctgtcaagctattccctttctctacactaacaatgtacacacttaatgttcttagacaagttaattttccaa |
30483076 |
T |
|
| Q |
253 |
tgttgggaaacatacgagacaaagatgaacaatattcaatgactatatgtctaagattttgtaaacaaaccaagcgtttcggaagacaactcagtgaatc |
352 |
Q |
| |
|
|||| |||||||| |||||||||| ||| | ||||||||||||||| |||||||||||||| ||| |||||||||| || ||||||||||| | |
|
|
| T |
30483077 |
tgttaggaaacatttgagacaaagaccgacattcttcaatgactatatgcctaagattttgtaagcaagccaagcgttttgggagacaactcagattacg |
30483176 |
T |
|
| Q |
353 |
acacttttttattttcaagatttccagtttttgtaagttgtaaattgagttaggcaacttttttatatcaagagaacgaagttccaaataccttaaatga |
452 |
Q |
| |
|
||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||| || |||||||||||||||||||||| |
|
|
| T |
30483177 |
acagtcttttattttcaagatttccagtttttgtaagttgtaaattgagttaggcaacttttctatgtcaagataaataagttccaaataccttaaatga |
30483276 |
T |
|
| Q |
453 |
attaaact |
460 |
Q |
| |
|
|||||||| |
|
|
| T |
30483277 |
attaaact |
30483284 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #15
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 51 - 460
Target Start/End: Original strand, 29852782 - 29853191
Alignment:
| Q |
51 |
tcccatgacaagcataattcatgaaggtcttttttacccatcaaattagccgtttcagcttcagataaactaccaacattgtttaatcctttgatactca |
150 |
Q |
| |
|
||||||||||| ||||||||||||| |||| ||||||||||||||||||||| |||||||||||||||||| || |||| ||||| ||||||||||||| |
|
|
| T |
29852782 |
tcccatgacaaacataattcatgaatgtctgttttacccatcaaattagccgcttcagcttcagataaactgcccacatcttttaagcctttgatactca |
29852881 |
T |
|
| Q |
151 |
gttttccaccgaggtttagatcacgtaactctgtcaagctattccctctctctaaactaacaatgtacacacttaatgttcttagacaagttaattttcc |
250 |
Q |
| |
|
| |||||||| ||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||| |||||| || |
|
|
| T |
29852882 |
gctttccaccaaggtttagatcacataactctgtcaagctattccctttctctaaactaacaatgtacatgcttaatgttcttagacaagataatttgcc |
29852981 |
T |
|
| Q |
251 |
aatgttgggaaacatacgagacaaagatgaacaatattcaatgactatatgtctaagattttgtaaacaaaccaagcgtttcggaagacaactcagtgaa |
350 |
Q |
| |
|
|||||| |||||||| ||||||||||| ||| || ||||||||||||||||||||||||||| ||| ||||| ||||||| |||||||||||| | |
|
|
| T |
29852982 |
aatgttaggaaacatgagagacaaagatcgacatcctttaatgactatatgtctaagattttgtaagcaagccaagtgtttcgggagacaactcagttca |
29853081 |
T |
|
| Q |
351 |
tcacacttttttattttcaagatttccagtttttgtaagttgtaaattgagttaggcaacttttttatatcaagagaacgaagttccaaataccttaaat |
450 |
Q |
| |
|
| || | |||||||||||| ||||||||||||||||||||||||||||||| |||||| ||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
29853082 |
ccgcagtcttttattttcaatatttccagtttttgtaagttgtaaattgagtccggcaacatttttatgtcaagagaacgaagttccaaataccttaaat |
29853181 |
T |
|
| Q |
451 |
gaattaaact |
460 |
Q |
| |
|
|||||||||| |
|
|
| T |
29853182 |
gaattaaact |
29853191 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #16
Raw Score: 118; E-Value: 1e-59
Query Start/End: Original strand, 57 - 699
Target Start/End: Complemental strand, 17418783 - 17418150
Alignment:
| Q |
57 |
gacaagcataattcatgaaggtcttttttacccatcaaattagccgtttcagcttcagataaactaccaacattgtttaatcctttgatactcagttttc |
156 |
Q |
| |
|
|||||||||||||| || |||||||||||||| ||||| ||||| || ||||||||||||| ||||||||| ||||| ||||||||||||| ||||| |
|
|
| T |
17418783 |
gacaagcataattcttggaggtcttttttacctatcaacttagcttcttgagcttcagataaattaccaacatcttttaagcctttgatactcaattttc |
17418684 |
T |
|
| Q |
157 |
caccgaggtttagatcacgtaactctgtcaagctattccctctctctaaactaacaatgtacacacttaatgttcttagacaagttaattttccaatgtt |
256 |
Q |
| |
|
|||||||||||||||||| ||||||| ||||||||| ||||||||| ||||||||||||| | ||||||||||||||| ||||||||||||| ||| |
|
|
| T |
17418683 |
caccgaggtttagatcacctaactctaccaagctattacctctctctgaactaacaatgtataagcttaatgttcttagagaagttaattttccgatgca |
17418584 |
T |
|
| Q |
257 |
gggaaacatacgagacaaagatgaacaatattcaatgactatatgtctaagattttgtaaacaaaccaagcgtttcggaagacaactcagtgaatcacac |
356 |
Q |
| |
|
||||||| ||||| | | | ||||||| | |||||||||||||||||| | | ||||| ||| || ||||||||||| || |
|
|
| T |
17418583 |
aggaaacaacttagacagtaaaccagcgtcatcaatgataagatgtctaagattttgtaagcgagacaagccttttggtggacaactcagt---cgacta |
17418487 |
T |
|
| Q |
357 |
ttttttattttcaagatttccagtttttgtaagttgtaaattgagttaggcaacttttttatatcaagagaacgaagttccaaataccttaaatgaatta |
456 |
Q |
| |
|
| ||||| ||||||||||| ||||||||||||||| ||||| ||| || || | ||||| | | |||||||||||| ||||||| ||||||||||| |
|
|
| T |
17418486 |
tgttttacattcaagatttctagtttttgtaagttgcaaattcagtccggtaaaatgtttatgtaagcagaacgaagttctaaataccataaatgaatta |
17418387 |
T |
|
| Q |
457 |
aactacctagtaatggctctcggataaaggttatgcgtaaaacccgaagagaaaggtttgttgggaagtaatcatgtttt--tcttttgaccaagtacta |
554 |
Q |
| |
|
|||| ||||| | || | ||| | ||| | ||| |||||||||||||||| ||||| |||| |||| ||||||||| ||| || | | || |
|
|
| T |
17418386 |
aactctctagtgagggtacctggagagaggatgtgcataaaacccgaagagaatggtttcttggcaagtggtcatgttttggtctgtt----atgatct- |
17418292 |
T |
|
| Q |
555 |
caaaactcaaaccatgttcgcaaggattcaactattttgaaagcatccttgtcgaaggataacaagtctttagtgtcaaaactaatgtggtgtgtgcttt |
654 |
Q |
| |
|
|||| |||| |||||||||||||||||||| ||||||| ||||||| | || |||| | |||| | || || ||||| |||||||||||||||| |
|
|
| T |
17418291 |
---aactgaaacaatgttcgcaaggattcaacttttttgaaggcatcctcattgagtgatagcgagtcatcagagtgaaaacatatgtggtgtgtgcttt |
17418195 |
T |
|
| Q |
655 |
ttgacaaactagtcaagtttgcattctccaaatacatacattctt |
699 |
Q |
| |
|
|||||||| || ||| |||||||||||| |||||||||||||||| |
|
|
| T |
17418194 |
ttgacaaaataatcatgtttgcattctctaaatacatacattctt |
17418150 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #17
Raw Score: 98; E-Value: 1e-47
Query Start/End: Original strand, 645 - 1062
Target Start/End: Original strand, 17982972 - 17983389
Alignment:
| Q |
645 |
tgtgtgctttttgacaaactagtcaagtttgcattctccaaatacatacattcttgccccattactgattgagcaagatcatggacaagatcatgcatct |
744 |
Q |
| |
|
||||| ||||||||||| |||||| ||||||||| ||| || |||||| |||||| |||||||||||||||||||||||| ||||| ||||| | |
|
|
| T |
17982972 |
tgtgtactttttgacaagttagtcacagatgcattctctaaaaccacacattcatgccccgctactgattgagcaagatcatggacgagatcgtgcattt |
17983071 |
T |
|
| Q |
745 |
tgaatgaaatgtcgccagaaaattcatccatttttctatcttgaaagaatgatttttggtacaattcatcccacaccatgatgccagcatcttcaacctc |
844 |
Q |
| |
|
|||| ||||| | | ||| | ||||| || | | ||||||||||| ||||||||||||||||||| ||| | |||| ||||| ||||||||||||| |
|
|
| T |
17983072 |
tgaaagaaatcacacttgaataatcatcaatatggatgtcttgaaagaaagatttttggtacaattcattccaaatcatgttgccaacatcttcaacctc |
17983171 |
T |
|
| Q |
845 |
cgtattacccctagatgaaatcaatccattagccatccaaagccaaatcaattcttcctttaggatttctgcatctttgggaaatatagcacaaaaagag |
944 |
Q |
| |
|
| ||| |||||||| || ||| ||||||||||||||| ||| | |||||| || | ||||||||| ||||||||||||||||||||||||| | |
|
|
| T |
17983172 |
caaattttttctagatgagataaatttattagccatccaaagatgaattagttcttctttcatgatttctgcttctttgggaaatatagcacaaaaagcg |
17983271 |
T |
|
| Q |
945 |
aaacattgttttagggctgccggtaaataaaagtaactcaacctcaaagcaggcaaaatggaattttcatctgataaatcccaaagttcactgtctttaa |
1044 |
Q |
| |
|
||||||||||||| || || | ||||| |||||| |||||||| | ||| || ||||| ||||| |||| | |||| |||| || || || ||||||| |
|
|
| T |
17983272 |
aaacattgttttaaggttggtgataaatgaaagtagctcaaccttagagctgggaaaatagaattctcatgcggtaaagcccagagctcgctctctttaa |
17983371 |
T |
|
| Q |
1045 |
ttttaagccattcctttt |
1062 |
Q |
| |
|
||| || ||||||||||| |
|
|
| T |
17983372 |
tttcaaaccattcctttt |
17983389 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #18
Raw Score: 82; E-Value: 4e-38
Query Start/End: Original strand, 677 - 1150
Target Start/End: Original strand, 30475472 - 30475945
Alignment:
| Q |
677 |
attctccaaatacatacattcttgccccattactgattgagcaagatcatggacaagatcatgcatcttgaatgaaatgtcgccagaaaattcatccatt |
776 |
Q |
| |
|
|||||||||| |||||| ||| |||||| |||||||||||||||||||| || || |||||||||||||| | |||||| || ||| | ||||| || |
|
|
| T |
30475472 |
attctccaaaatcatacactctgaccccataactgattgagcaagatcatgcactaggtcatgcatcttgaaagtaatgtctcctgaataatcatctatc |
30475571 |
T |
|
| Q |
777 |
tttctatcttgaaagaatgatttttggtacaattcatcccacaccatgatgccagcatcttcaacctccgtattacccctagatgaaatcaatccattag |
876 |
Q |
| |
|
|| | ||||| ||||||||||||||| ||| ||| | ||| | ||| ||||| | ||| || ||| |||| || | || |||| |||||||| |
|
|
| T |
30475572 |
ttgatgtcttggaagaatgatttttggcacagttccttccaaatcatattgccaaaaaattctacatccaaattagcctttgagaaaataaatccattgc |
30475671 |
T |
|
| Q |
877 |
ccatccaaagccaaatcaattcttcctttaggatttctgcatctttgggaaatatagcacaaaaagagaaacattgttttagggctgccggtaaataaaa |
976 |
Q |
| |
|
||||||| || |||||| |||||||||| ||||| ||||||||||||||| |||||||||| ||||| | |||| || | | ||||| ||| |
|
|
| T |
30475672 |
ccatccatagatgaatcaaatcttcctttacaatttccatatctttgggaaatatcgcacaaaaagcaaaacaccgctttaaggtcggtgttaaatgaaa |
30475771 |
T |
|
| Q |
977 |
gtaactcaacctcaaagcaggcaaaatggaattttcatctgataaatcccaaagttcactgtctttaattttaagccattccttttcatctttccttgag |
1076 |
Q |
| |
|
||| || |||||||| || |||||||||||||| |||| || ||| ||| || | |||||||||||||| ||||||||| |||||||| |||||||| |
|
|
| T |
30475772 |
gtagcttaacctcaaggctggcaaaatggaattctcatatggtaaggtccagagattactgtctttaatttcaagccattcattttcatcactccttgag |
30475871 |
T |
|
| Q |
1077 |
ttcattaaacttcccaatgattttgctgcaagaggcaatccattgcatttctttactatctcctttcctattgc |
1150 |
Q |
| |
|
||||| || |||||||| || |||||||||||||||||| || |||||||||||| |||| |||||||| |
|
|
| T |
30475872 |
cgcattagacctcccaatgcttgtgctgcaagaggcaatcctccacacttctttactatcgccttacctattgc |
30475945 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #19
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 995 - 1153
Target Start/End: Complemental strand, 30676979 - 30676821
Alignment:
| Q |
995 |
aggcaaaatggaattttcatctgataaatcccaaagttcactgtctttaattttaagccattccttttcatctttccttgagttcattaaacttcccaat |
1094 |
Q |
| |
|
||||||||| ||||||| | || |||| ||||||| |||||||||||||| | |||||||||||| || || ||||||||| |||| |||| |||||| |
|
|
| T |
30676979 |
aggcaaaatagaatttttttgtggtaaagcccaaagctcactgtctttaatatcaagccattccttctcttcattccttgagctcatcaaaccccccaat |
30676880 |
T |
|
| Q |
1095 |
gattttgctgcaagaggcaatccattgcatttctttactatctcctttcctattgccac |
1153 |
Q |
| |
|
| |||||||||||||||||||||||| ||||||||||||||||||||||| ||| |||| |
|
|
| T |
30676879 |
gcttttgctgcaagaggcaatccattacatttctttactatctcctttccaatttccac |
30676821 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #20
Raw Score: 78; E-Value: 1e-35
Query Start/End: Original strand, 568 - 881
Target Start/End: Complemental strand, 30331249 - 30330936
Alignment:
| Q |
568 |
atgttcgcaaggattcaactattttgaaagcatccttgtcgaaggataacaagtctttagtgtcaaaactaatgtggtgtgtgctttttgacaaactagt |
667 |
Q |
| |
|
|||||||||||||||||||| ||||||| ||| | | |||| |||||||| | || | ||||||||| ||||| || |||||||||| ||||||||| |
|
|
| T |
30331249 |
atgttcgcaaggattcaacttttttgaaggcaccgtcatcgattgataacaaattattggagtcaaaacttatgtgatgggtgctttttgtcaaactagt |
30331150 |
T |
|
| Q |
668 |
caagtttgcattctccaaatacatacattcttgccccattactgattgagcaagatcatggacaagatcatgcatcttgaatgaaatgtcgccagaaaat |
767 |
Q |
| |
|
|| |||||||||||||| ||||||| ||| |||| ||| || ||||||||||||||||| || ||||||| || |||| || |||||||| |||| || |
|
|
| T |
30331149 |
catgtttgcattctccagatacatatattgttgctccagtattgattgagcaagatcattgaaaagatcacgcgtctttaaagaaatgtctttagaatat |
30331050 |
T |
|
| Q |
768 |
tcatccatttttctatcttgaaagaatgatttttggtacaattcatcccacaccatgatgccagcatcttcaacctccgtattacccctagatgaaatca |
867 |
Q |
| |
|
|||| || || | |||| |||||||| ||||||| ||||| ||| ||| ||||| | || ||||| |||||| ||||| |||||||||||| | |
|
|
| T |
30331049 |
tcatagatcttgatgtcttcaaagaatggtttttggcacaatccattccaagccatgctagcaacatctaggacctccaaattacgcctagatgaaataa |
30330950 |
T |
|
| Q |
868 |
atccattagccatc |
881 |
Q |
| |
|
|||||| ||||||| |
|
|
| T |
30330949 |
atccatcagccatc |
30330936 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #21
Raw Score: 72; E-Value: 4e-32
Query Start/End: Original strand, 710 - 1149
Target Start/End: Complemental strand, 30521601 - 30521162
Alignment:
| Q |
710 |
tgattgagcaagatcatggacaagatcatgcatcttgaatgaaatgtcgccagaaaattcatccatttttctatcttgaaagaatgatttttggtacaat |
809 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||| |||||| | || ||| || |||| || | ||||| || ||||| |||||| ||||| |
|
|
| T |
30521601 |
tgattgagcaagatcatggacaagatcatgcaacttgaaagaaatgcctcctgaatcatcgaccatcttgatttcttggaaaaatgacttttggcacaat |
30521502 |
T |
|
| Q |
810 |
tcatcccacaccatgatgccagcatcttcaacctccgtattacccctagatgaaatcaatccattagccatccaaagccaaatcaattcttcctttagga |
909 |
Q |
| |
|
|||| ||| | ||| | ||| ||||||| ||||| ||| |||| ||||| || ||||| || || ||||| || ||| || ||| |||| | || |
|
|
| T |
30521501 |
tcattccaaatcatatttccaacatcttctacctctaaattttcccttgatgatataaatccgttggcgatccagagatgaattaaatctcccttcatga |
30521402 |
T |
|
| Q |
910 |
tttctgcatctttgggaaatatagcacaaaaagagaaacattgttttagggctgccggtaaataaaagtaactcaacctcaaagcaggcaaaatggaatt |
1009 |
Q |
| |
|
||||| |||||||||||| || |||||||||| |||||||||||||| || || ||||| |||||| |||||||| |||||||||||||| ||||| |
|
|
| T |
30521401 |
tttctatatctttgggaaacatggcacaaaaagtgaaacattgttttaaggttgggtttaaatgaaagtagctcaaccttaaagcaggcaaaatagaatt |
30521302 |
T |
|
| Q |
1010 |
ttcatctgataaatcccaaagttcactgtctttaattttaagccattccttttcatctttccttgagttcattaaacttcccaatgattttgctgcaaga |
1109 |
Q |
| |
|
|||| | |||| ||||| || |||||||||| ||||||||| ||||| | |||||||| ||||| | |||||||| || |||||||||| |
|
|
| T |
30521301 |
ctcattcggtaaagaccaaatcctgctatctttaatttcaagccattctttttctccactccttgagcacattaggcctcccaatgcttgtgctgcaaga |
30521202 |
T |
|
| Q |
1110 |
ggcaatccattgcatttctttactatctcctttcctattg |
1149 |
Q |
| |
|
|||||||| || |||||||||||||| |||||||||| |
|
|
| T |
30521201 |
ggcaatcccccacacttctttactatctcttttcctattg |
30521162 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #22
Raw Score: 72; E-Value: 4e-32
Query Start/End: Original strand, 710 - 1149
Target Start/End: Complemental strand, 30561941 - 30561502
Alignment:
| Q |
710 |
tgattgagcaagatcatggacaagatcatgcatcttgaatgaaatgtcgccagaaaattcatccatttttctatcttgaaagaatgatttttggtacaat |
809 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||| |||||| | || ||| || |||| || | ||||| || ||||| |||||| ||||| |
|
|
| T |
30561941 |
tgattgagcaagatcatggacaagatcatgcaacttgaaagaaatgcctcctgaatcatcgaccatcttgatttcttggaaaaatgacttttggcacaat |
30561842 |
T |
|
| Q |
810 |
tcatcccacaccatgatgccagcatcttcaacctccgtattacccctagatgaaatcaatccattagccatccaaagccaaatcaattcttcctttagga |
909 |
Q |
| |
|
|||| ||| | ||| | ||| ||||||| ||||| ||| |||| ||||| || ||||| || || ||||| || ||| || ||| |||| | || |
|
|
| T |
30561841 |
tcattccaaatcatatttccaacatcttctacctctaaattttcccttgatgatataaatccgttggcgatccagagatgaattaaatctcccttcatga |
30561742 |
T |
|
| Q |
910 |
tttctgcatctttgggaaatatagcacaaaaagagaaacattgttttagggctgccggtaaataaaagtaactcaacctcaaagcaggcaaaatggaatt |
1009 |
Q |
| |
|
||||| |||||||||||| || |||||||||| |||||||||||||| || || ||||| |||||| |||||||| |||||||||||||| ||||| |
|
|
| T |
30561741 |
tttctatatctttgggaaacatggcacaaaaagtgaaacattgttttaaggttgggtttaaatgaaagtagctcaaccttaaagcaggcaaaatagaatt |
30561642 |
T |
|
| Q |
1010 |
ttcatctgataaatcccaaagttcactgtctttaattttaagccattccttttcatctttccttgagttcattaaacttcccaatgattttgctgcaaga |
1109 |
Q |
| |
|
|||| | |||| ||||| || |||||||||| ||||||||| ||||| | |||||||| ||||| | |||||||| || |||||||||| |
|
|
| T |
30561641 |
ctcattcggtaaagaccaaatcctgctatctttaatttcaagccattctttttctccactccttgagcacattaggcctcccaatgcttgtgctgcaaga |
30561542 |
T |
|
| Q |
1110 |
ggcaatccattgcatttctttactatctcctttcctattg |
1149 |
Q |
| |
|
|||||||| || |||||||||||||| |||||||||| |
|
|
| T |
30561541 |
ggcaatcccccacacttctttactatctcttttcctattg |
30561502 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #23
Raw Score: 53; E-Value: 8e-21
Query Start/End: Original strand, 208 - 471
Target Start/End: Original strand, 17982531 - 17982795
Alignment:
| Q |
208 |
taacaatgtacacacttaatgttcttagacaagttaattttccaatgttgggaaacatacgagacaaagatgaacaatattcaatgactatatgtctaag |
307 |
Q |
| |
|
||||||| || |||||||||| | ||| || | |||||||||||||| |||||||| ||||||| || ||||| ||||||||||| ||||||||| |
|
|
| T |
17982531 |
taacaatatagacacttaatgattttaagcatgataattttccaatgtgaggaaacatgtgagacaacgaataacaacgttcaatgactaaatgtctaag |
17982630 |
T |
|
| Q |
308 |
attttgtaaacaaa-ccaagcgtttcggaagacaactcagtgaatcacacttttttattttcaagatttccagtttttgtaagttgtaaattgagttagg |
406 |
Q |
| |
|
|||||||||||||| || |||||||| |||||||||||| | | ||| | |||||||||||||| |||||||||| | |||||||||| || |
|
|
| T |
17982631 |
attttgtaaacaaagacagacgtttcggcagacaactcagtttgtaaacagatttcaatttcaagatttccaatttttgtaagctataaattgagtcggg |
17982730 |
T |
|
| Q |
407 |
caacttttttatatcaagagaacgaagttccaaataccttaaatgaattaaactacctagtaatg |
471 |
Q |
| |
|
|| ||||||| |||| | |||| ||||||||||| ||||||||||||||| | ||||||| |
|
|
| T |
17982731 |
gaatatttttatctcaaaactgtgaagctccaaatacctcaaatgaattaaactaacgagtaatg |
17982795 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 53 - 320
Target Start/End: Original strand, 30474854 - 30475121
Alignment:
| Q |
53 |
ccatgacaagcataattcatgaaggtcttttttacccatcaaattagccgtttcagcttcagataaactaccaacattgtttaatcctttgatactcagt |
152 |
Q |
| |
|
|||||||||| ||||||| || ||||| ||||||||||||||||| || | ||||||| |||| ||||||||||| | |||| || |||||| |
|
|
| T |
30474854 |
ccatgacaaggataattcttggaggtcctttttacccatcaaattggcatgtcgagcttcaaataagctaccaacatttcccagaccttgtatgctcagt |
30474953 |
T |
|
| Q |
153 |
tttccaccgaggtttagatcacgtaactctgtcaagctattccctctctctaaactaacaatgtacacacttaatgttcttagacaagttaattttccaa |
252 |
Q |
| |
|
||||| || || ||||||| ||| |||| ||||| || ||| |||||| | ||||||||| ||||||||||||||||| || |||||||||| |
|
|
| T |
30474954 |
tttcctccaagtgatagatcatgtagctctcccaagccataccccctctctgactgaacaatgtatacacttaatgttcttaggaaatacaattttccaa |
30475053 |
T |
|
| Q |
253 |
tgttgggaaacatacgagacaaagatgaacaatattcaatgactatatgtctaagattttgtaaacaa |
320 |
Q |
| |
|
| | ||||||| || |||||| || ||||| ||||||||| | ||| || ||||| ||||||||| |
|
|
| T |
30475054 |
tataaggaaacacacaagacaatgaattacaatcttcaatgacaagatgcctgagattctgtaaacaa |
30475121 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 53 - 123
Target Start/End: Original strand, 17982400 - 17982470
Alignment:
| Q |
53 |
ccatgacaagcataattcatgaaggtcttttttacccatcaaattagccgtttcagcttcagataaactac |
123 |
Q |
| |
|
|||||||| ||||||||||| |||||||||||||| || ||||| || |||| ||||||||||||||| |
|
|
| T |
17982400 |
ccatgacaggcataattcattgaggtcttttttacctataaaatttgcttcttcaacttcagataaactac |
17982470 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 711 - 748
Target Start/End: Original strand, 15347065 - 15347102
Alignment:
| Q |
711 |
gattgagcaagatcatggacaagatcatgcatcttgaa |
748 |
Q |
| |
|
||||||||||||||||| ||||||||||||||| |||| |
|
|
| T |
15347065 |
gattgagcaagatcatgaacaagatcatgcatcgtgaa |
15347102 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 716 - 749
Target Start/End: Original strand, 16396737 - 16396770
Alignment:
| Q |
716 |
agcaagatcatggacaagatcatgcatcttgaat |
749 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||| |
|
|
| T |
16396737 |
agcaagatcatgaacaagatcatgcatcttgaat |
16396770 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 711 - 748
Target Start/End: Original strand, 17927655 - 17927692
Alignment:
| Q |
711 |
gattgagcaagatcatggacaagatcatgcatcttgaa |
748 |
Q |
| |
|
||||||||||||||||| |||||||||||||| ||||| |
|
|
| T |
17927655 |
gattgagcaagatcatgaacaagatcatgcattttgaa |
17927692 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 470; Significance: 0; HSPs: 3)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 470; E-Value: 0
Query Start/End: Original strand, 51 - 1153
Target Start/End: Complemental strand, 20297223 - 20296115
Alignment:
| Q |
51 |
tcccatgacaagcataattcatgaaggtcttttttacccatcaaattagccgtttcagcttcagataaactaccaacattgtttaatcctttgatactca |
150 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||||||||||| || || ||||||||||| ||| ||||||| ||||| ||||||||||||| |
|
|
| T |
20297223 |
tcccaagacaagcataattcatgaaggtcttttttacccatcaaattggcttcttgagcttcagatatactgccaacatcttttaagcctttgatactca |
20297124 |
T |
|
| Q |
151 |
gttttccaccgaggtttagatcacgtaactctgtcaagctattccctctctctaaactaacaatgtacacacttaatgttcttagacaagttaattttcc |
250 |
Q |
| |
|
|||||||||| || ||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
20297123 |
gttttccaccaagttttagatcacgtaactctgtcaagctattccctttctttaaactaacaatgtacacacttaatgttcttagacaagataattttcc |
20297024 |
T |
|
| Q |
251 |
aatgttgggaaacatacgagacaaagatgaacaatattcaatgactatatgtctaagattttgtaaacaaaccaagcgtttcggaagacaactcagtgaa |
350 |
Q |
| |
|
|||| | |||||||| ||||||||||| |||||| ||||||||||||||||||||||||||||| || ||||| ||||||||||||||||||| | |
|
|
| T |
20297023 |
aatgctaggaaacattcgagacaaagaccaacaatcttcaatgactatatgtctaagattttgtaggcaggccaagtgtttcggaagacaactcagatta |
20296924 |
T |
|
| Q |
351 |
tcacacttttttattttcaagatttccagtttttgtaagttgtaaattgagttaggcaacttttttatatcaagagaacgaagttccaaataccttaaat |
450 |
Q |
| |
|
||||| | ||||||||||| |||||| |||||| |||||||||||||||| |||||||| |||||| ||||| |||||| |||||||||||||||| |
|
|
| T |
20296923 |
tcacagcgtattattttcaaggtttccaatttttgcaagttgtaaattgagtcaggcaactcttttatgacaagattacgaagctccaaataccttaaat |
20296824 |
T |
|
| Q |
451 |
gaattaaactacctagtaatggctctcggataaaggttatgcgtaaaacccgaagagaaaggtttgttgggaagtaatcatgtttttcttttgaccaagt |
550 |
Q |
| |
|
|||||||||| ||||| || || | || |||||| | |||| |||||||||||||||||||||||||||| ||||||||| | | ||| || || |
|
|
| T |
20296823 |
gaattaaactctctagtgatcgcacatgggtaaaggatgtgcgcaaaacccgaagagaaaggtttgttgggatgtaatcatgatctattttggaataatg |
20296724 |
T |
|
| Q |
551 |
actacaa------aactcaaaccatgttcgcaaggattcaactattttgaaagcatccttgtcgaaggataacaagtctttagtgtcaaaactaatgtgg |
644 |
Q |
| |
|
| | || |||| |||| |||||||||||||||||||| |||||| ||| |||||| || ||||||||||||| | |||||||| ||||||| |
|
|
| T |
20296723 |
atgataatcactcaactgaaacaatgttcgcaaggattcaacttctttgaaggcacccttgttgatggataacaagtctgtgtagtcaaaaccaatgtgg |
20296624 |
T |
|
| Q |
645 |
tgtgtgctttttgacaaactagtcaagtttgcattctccaaatacatacattcttgccccattactgattgagcaagatcatggacaagatcatgcatct |
744 |
Q |
| |
|
||||||||| ||||||| |||| | |||| || |||||||||||||||||||| ||||| |||||| ||| ||||||| |||||||||||||||| |
|
|
| T |
20296623 |
tgtgtgcttcgtgacaaattagtaacgtttttatcctccaaatacatacattctttccccactactgaatgaaggagatcataaacaagatcatgcatct |
20296524 |
T |
|
| Q |
745 |
tgaatgaaatgtcgccagaaaattcatccatttttctatcttgaaagaatgatttttggtacaattcatcccacaccatgatgccagcatcttcaacctc |
844 |
Q |
| |
|
|||| |||| || | |||| ||||||| ||||| | ||||||||||||||||||||||||||||| | ||| |||||| | ||| |||||||||| || |
|
|
| T |
20296523 |
tgaaataaatatctctagaatattcatctattttgatttcttgaaagaatgatttttggtacaattccttccaaaccatgtttccaacatcttcaacgtc |
20296424 |
T |
|
| Q |
845 |
cgtattacccctagatgaaatcaatccattagccatccaaagccaaatcaattcttcctttaggatttctgcatctttgggaaatatagcacaaaaagag |
944 |
Q |
| |
|
| ||||||| |||||||||| ||||||||||||||||||||| |||||||||||| || | ||||||| ||| || ||||||||||||||||||||| |
|
|
| T |
20296423 |
caaattacccatagatgaaattaatccattagccatccaaagctgaatcaattcttctttcaagatttctctatccttaggaaatatagcacaaaaagag |
20296324 |
T |
|
| Q |
945 |
aaacattgttttagggctgccggtaaataaaagtaactcaacctcaaagcaggcaaaatggaattttcatctgataaatcccaaagttcactgtctttaa |
1044 |
Q |
| |
|
|||||||| ||||| | || | ||||||||||||||||| |||||||||||||||||| || ||||| | || |||| ||||||| ||| ||||||||| |
|
|
| T |
20296323 |
aaacattgctttagagttggtgttaaataaaagtaactcagcctcaaagcaggcaaaatagatttttcttgtggtaaagcccaaaggtcattgtctttaa |
20296224 |
T |
|
| Q |
1045 |
ttttaagccattccttttcatctttccttgagttcattaaacttcccaatgattttgctgcaagaggcaatccattgcatttctttactatctcctttcc |
1144 |
Q |
| |
|
| | | ||||||||||||| || ||| ||||| |||||||| |||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
20296223 |
tatcacgccattccttttcttcattcattgagaccattaaacctcccaatgcttttgctgcaagaggcaatccattacatttctttactatctcctttcc |
20296124 |
T |
|
| Q |
1145 |
tattgccac |
1153 |
Q |
| |
|
|||| |||| |
|
|
| T |
20296123 |
tatttccac |
20296115 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 124; E-Value: 3e-63
Query Start/End: Original strand, 671 - 1153
Target Start/End: Original strand, 52352049 - 52352532
Alignment:
| Q |
671 |
gtttgcattctccaaatacatacattcttgccccattactgattgagcaagatcatggacaagatcatgcatcttgaatgaaatgtcgccagaaaattca |
770 |
Q |
| |
|
||||| |||||||| | |||||| ||| |||||| | |||||||||||||||||| |||||||||||||||||||| |||||||| || || | ||| |
|
|
| T |
52352049 |
gtttgtattctccataatcatacactctggccccacaattgattgagcaagatcatgtacaagatcatgcatcttgaaagaaatgtctcctaaataatca |
52352148 |
T |
|
| Q |
771 |
tccatttttctatcttgaaagaatgatttttggtacaattcatcccacaccatgatgccagcatctt-caacctccgtattacccctagatgaaatcaat |
869 |
Q |
| |
|
| || || | |||||||||||||| |||||||||||||||| ||| | ||| ||||| | |||| | |||||| ||| || |||| ||||| ||| |
|
|
| T |
52352149 |
ttgatcttgatgtcttgaaagaatgacttttggtacaattcattccaaatcatattgccaacttctttctacctccaaattttccttagacgaaataaat |
52352248 |
T |
|
| Q |
870 |
ccattagccatccaaagccaaatcaattcttcctttaggatttctgcatctttgggaaatatagcacaaaaagagaaacattgttttagggctgccggta |
969 |
Q |
| |
|
||||| |||||||| || |||||| || || ||||||||||| | ||||||||||||||| ||||| ||||||||||||||||||| || || || || |
|
|
| T |
52352249 |
ccattggccatccagagatgaatcaaatcgtcttttaggatttccgtatctttgggaaatatggcacagaaagagaaacattgttttaaggttgacgtta |
52352348 |
T |
|
| Q |
970 |
aataaaagtaactcaacctcaaagcaggcaaaatggaattttcatctgataaatcccaaagttcactgtctttaattttaagccattccttttcatcttt |
1069 |
Q |
| |
|
||| || |||||||||||||| ||||||||||| ||||| |||||||||||| |||||| | || |||||||||| || |||||||||||| | || |
|
|
| T |
52352349 |
aatggaaataactcaacctcaaggcaggcaaaatagaattctcatctgataaagaccaaagcttgctctctttaatttcaacccattccttttctccatt |
52352448 |
T |
|
| Q |
1070 |
ccttgagttcattaaacttcccaatgattttgctgcaagaggcaatccattgcatttctttactatctcctttcctattgccac |
1153 |
Q |
| |
|
|||||| ||||| || ||| |||| || ||| |||||||||||||| || |||||||||||| | || ||||||||||| |
|
|
| T |
52352449 |
tcttgagcgcattagacctcctaatgcttgtgcagcaagaggcaatcccccacacttctttactatcgctttgcctattgccac |
52352532 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 783 - 1152
Target Start/End: Original strand, 13616800 - 13617168
Alignment:
| Q |
783 |
tcttgaaagaatgatttttggtacaattcatcccacaccatgatgccagcatcttcaacctccgtattacccctagatgaaatcaatccattagccatcc |
882 |
Q |
| |
|
|||||||| || ||||||||||||||||||| ||| | |||| | ||| |||||||||||||| || || ||||||| ||| |||||||||||| |
|
|
| T |
13616800 |
tcttgaaaaaaagatttttggtacaattcattccaaatcatgtttccaacatcttcaacctccaatttttttttacatgaaataaattcattagccatcc |
13616899 |
T |
|
| Q |
883 |
aaagccaaatcaattcttcctttaggatttctgcatctttgggaaatatagcacaaaaagagaaacattgttttagggctgccggtaaataaaagtaact |
982 |
Q |
| |
|
|||| |||||||||||||||| ||||| || |||||| ||||||| | |||| |||| ||| |||||||| | || || || ||||| |||||||| |
|
|
| T |
13616900 |
aaagatgaatcaattcttcctttgtgatttttgtatctttaggaaatacaacacagaaagcgaatcattgtttaaaggttggcgataaat-gaagtaact |
13616998 |
T |
|
| Q |
983 |
caacctcaaagcaggcaaaatggaattttcatctgataaatcccaaagttcactgtctttaattttaagccattccttttcatctttccttgagttcatt |
1082 |
Q |
| |
|
|| ||||||| |||| ||||| ||||| |||| |||||||||||| || || ||| |||||| | |||||||||||| | |||| |||| ||| |
|
|
| T |
13616999 |
cagcctcaaatcaggaaaaatagaattctcataccgtaaatcccaaagctcgctctctctaatttcacaccattccttttctccactcctcgagtgtatt |
13617098 |
T |
|
| Q |
1083 |
aaacttcccaatgattttgctgcaagaggcaatccattgcatttctttactatctcctttcctattgcca |
1152 |
Q |
| |
|
| | ||||||| || | |||||||||||||||| || || || |||||||||||||||||||||| |
|
|
| T |
13617099 |
agagaccccaatgcttgtcctgcaagaggcaatcctccacactttttaactatctcctttcctattgcca |
13617168 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 467; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 467; E-Value: 0
Query Start/End: Original strand, 51 - 1153
Target Start/End: Original strand, 26706815 - 26707905
Alignment:
| Q |
51 |
tcccatgacaagcataattcatgaaggtcttttttacccatcaaattagccgtttcagcttcagataaactaccaacattgtttaatcctttgatactca |
150 |
Q |
| |
|
||||||||||||||||||| | |||| |||||| ||||||||||| || || ||||||||||||||| ||||||| ||||| |||| |||||||| |
|
|
| T |
26706815 |
tcccatgacaagcataatttttcgaggttttttttccccatcaaattggcttcttgagcttcagataaactgccaacatcttttaagccttcgatactca |
26706914 |
T |
|
| Q |
151 |
gttttccaccgaggtttagatcacgtaactctgtcaagctattccctctctctaaactaacaatgtacacacttaatgttcttagacaagttaattttcc |
250 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| | ||||||||| |
|
|
| T |
26706915 |
gttttccaccgaggtttagatcacgtaactctgtcaagctattccctttctctaaactaacaatgtacacacttaatgttcttagacaggataattttcc |
26707014 |
T |
|
| Q |
251 |
aatgttgggaaacatacgagacaaagatgaacaatattcaatgactatatgtctaagattttgtaaacaaaccaagcgtttcggaagacaactcagtgaa |
350 |
Q |
| |
|
|||| | |||||||| |||||||||||| ||| |||||||||||||||||||||||||||||||||| |||| |||| |||||||||||||| | |
|
|
| T |
26707015 |
aatgctaggaaacattcgagacaaagatccacatccttcaatgactatatgtctaagattttgtaaacaagtcaagtgtttaggaagacaactcagatta |
26707114 |
T |
|
| Q |
351 |
tcacacttttttattttcaagatttccagtttttgtaagttgtaaattgagttaggcaacttttttatatcaagagaacgaagttccaaataccttaaat |
450 |
Q |
| |
|
||||| | |||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
26707115 |
tcacaatcttttattttcaagatttccagtttttttaagttgtaaattgagttaggaaacttttttatatcaagataacgaagttccaaataccttaaat |
26707214 |
T |
|
| Q |
451 |
gaattaaactacctagtaatggctctcggataaaggttatgcgtaaaacccgaagagaaaggtttgttgggaagtaatcatgtttttcttttgaccaagt |
550 |
Q |
| |
|
||||||| || |||||| || | | || | ||| ||||||||||||||| ||||| |||||||| |||||| |||| | || || | |
|
|
| T |
26707215 |
gaattaagctccctagtgataatacctg------ggatgtgcataaaacccgaagagagcggtttaatgggaagtgatcatggttttttggggaataa-t |
26707307 |
T |
|
| Q |
551 |
actacaaaactcaaaccatgttcgcaaggattcaactattttgaaagcatccttgtcgaaggataacaagtctttagtgtcaaaactaatgtggtgtgtg |
650 |
Q |
| |
|
|| | || |||||| |||||||||||||||||||| ||||||| | ||| ||||| ||||| || | | || |||||| |||||||||||| |
|
|
| T |
26707308 |
tcttc--aagtcaaacaatgttcgcaaggattcaacttttttgaagataccctcatcgaatgataaaaaagtatcggagttaaaacttatgtggtgtgtg |
26707405 |
T |
|
| Q |
651 |
ctttttgacaaactagtcaagtttgcattctccaaatacatacattcttgccccattactgattgagcaagatcatggacaagatcatgcatcttgaatg |
750 |
Q |
| |
|
||||||| ||||||| ||| ||||||||||||||||||||| |||||||| ||||||||||||||||| |||||||||| |||||||||||||||||| | |
|
|
| T |
26707406 |
ctttttgtcaaactactcatgtttgcattctccaaatacatgcattcttgtcccattactgattgagcgagatcatggataagatcatgcatcttgaaag |
26707505 |
T |
|
| Q |
751 |
aaatgtcgccagaaaattcatccatttttctatcttgaaagaatgatttttggtacaattcatcccacaccatgatgccagcatcttcaacctccgtatt |
850 |
Q |
| |
|
||||||| |||||| ||||| |||| || | ||||||||||||||||||||||||||||| | ||| |||||| | ||| ||||||||||||| ||| |
|
|
| T |
26707506 |
aaatgtctccagaatattcacccatcttacagtcttgaaagaatgatttttggtacaattccttccaaaccatgtttccaacatcttcaacctctaaatt |
26707605 |
T |
|
| Q |
851 |
acccctagatgaaatcaatccattagccatccaaagccaaatcaattcttcctttaggatttctgcatctttgggaaatatagcacaaaaagagaaacat |
950 |
Q |
| |
|
||| || ||| |||||||||||||||||||| ||||||||||||||| | ||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
26707606 |
---cctctttgcaataaatccattagccatccaaagttgaatcaattcttccttcaagatttctctatctttgggaaatatagcacaaaaagagaaacat |
26707702 |
T |
|
| Q |
951 |
tgttttagggctgccggtaaataaaagtaactcaacctcaaagcaggcaaaatggaattttcatctgataaatcccaaagttcactgtctttaattttaa |
1050 |
Q |
| |
|
|| ||||||| || | |||||||||||||||||||||||||||||||||||| || ||||| | || |||||||||||| |||||||||||||| | || |
|
|
| T |
26707703 |
tgctttagggttggtgttaaataaaagtaactcaacctcaaagcaggcaaaatagatttttcttgtggtaaatcccaaagctcactgtctttaatatcaa |
26707802 |
T |
|
| Q |
1051 |
gccattccttttcatctttccttgagttcattaaacttcccaatgattttgctgcaagaggcaatccattgcatttctttactatctcctttcctattgc |
1150 |
Q |
| |
|
||||||||||||| || ||| ||||| |||||||| |||||||| ||||||||||||||| |||||||| ||||| ||||||||||||||||||||| | |
|
|
| T |
26707803 |
gccattccttttcttcattcattgagaacattaaacctcccaatgcttttgctgcaagaggtaatccattacatttttttactatctcctttcctatttc |
26707902 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 156; Significance: 3e-82; HSPs: 4)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 156; E-Value: 3e-82
Query Start/End: Original strand, 633 - 1172
Target Start/End: Complemental strand, 7581772 - 7581233
Alignment:
| Q |
633 |
aaactaatgtggtgtgtgctttttgacaaactagtcaagtttgcattctccaaatacatacattcttgccccattactgattgagcaagatcatggacaa |
732 |
Q |
| |
|
|||||||| || || ||||||||||||| | | ||||| | ||||||| ||| ||||||||||||| ||| ||||||| ||||||||||||||| | |
|
|
| T |
7581772 |
aaactaatatgatgggtgctttttgacatatttgtcaaacattcattctctaaaaccatacattcttgcaccactactgatcgagcaagatcatggatga |
7581673 |
T |
|
| Q |
733 |
gatcatgcatcttgaatgaaatgtcgccagaaaattcatccatttttctatcttgaaagaatgatttttggtacaattcatcccacaccatgatgccagc |
832 |
Q |
| |
|
|||||||||| ||||| |||||||| | ||| |||||||| | | ||||||||||| || |||||| ||||||||| ||| | |||| ||||| | |
|
|
| T |
7581672 |
gatcatgcattttgaaagaaatgtctcttgaatcatcatccatatgaatgtcttgaaagaaagacttttggcacaattcattccaaatcatgttgccaac |
7581573 |
T |
|
| Q |
833 |
atcttcaacctccgtattacccctagatgaaatcaatccattagccatccaaagccaaatcaattcttcctttaggatttctgcatctttgggaaatata |
932 |
Q |
| |
|
||||||||||||| ||| ||||||||||| ||| |||||||||||||||| ||||||||||||||| | ||||| || |||||| ||||||||| |
|
|
| T |
7581572 |
atcttcaacctccaaattttttctagatgaaataaattcattagccatccaaagatgaatcaattcttccttcatgatttttgtatctttaggaaatata |
7581473 |
T |
|
| Q |
933 |
gcacaaaaagagaaacattgttttagggctgccggtaaataaaagtaactcaacctcaaagcaggcaaaatggaattttcatctgataaatcccaaagtt |
1032 |
Q |
| |
|
|||||||||| |||||||||||||| || || | ||||| |||||| ||||| |||| ||| |||||| | ||||| |||| | |||||||||||| | |
|
|
| T |
7581472 |
gcacaaaaagcgaaacattgttttaaggttggtgataaatgaaagtagctcaatctcagagctggcaaagtagaattctcatgcggtaaatcccaaagct |
7581373 |
T |
|
| Q |
1033 |
cactgtctttaattttaagccattccttttcatctttccttgagttcattaaacttcccaatgattttgctgcaagaggcaatccattgcatttctttac |
1132 |
Q |
| |
|
| || |||||||||| || |||||||||||| || ||||||||| ||||| || ||||||| || |||||||||||||||||| ||||| ||||| |
|
|
| T |
7581372 |
cgctctctttaatttcaaaccattccttttcttcactccttgagtgcattagacaccccaatgcttgtgctgcaagaggcaatcccgcacatttttttac |
7581273 |
T |
|
| Q |
1133 |
tatctcctttcctattgccacgagatcagcacgctcttct |
1172 |
Q |
| |
|
||||||||| ||||||||||| || || |||| ||||||| |
|
|
| T |
7581272 |
tatctccttgcctattgccacaagctctgcactctcttct |
7581233 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 148; E-Value: 2e-77
Query Start/End: Original strand, 633 - 1184
Target Start/End: Original strand, 7099474 - 7100025
Alignment:
| Q |
633 |
aaactaatgtggtgtgtgctttttgacaaactagtcaagtttgcattctccaaatacatacattcttgccccattactgattgagcaagatcatggacaa |
732 |
Q |
| |
|
|||||||| || ||||||||||||||||| |||||| | |||||| || ||| |||||||||||||||| |||||||||||||||||||||||| | |
|
|
| T |
7099474 |
aaactaatatgatgtgtgctttttgacaagttagtcacatatgcattatctaaaaccatacattcttgcccccctactgattgagcaagatcatggacga |
7099573 |
T |
|
| Q |
733 |
gatcatgcatcttgaatgaaatgtcgccagaaaattcatccatttttctatcttgaaagaatgatttttggtacaattcatcccacaccatgatgccagc |
832 |
Q |
| |
|
|||||||||| ||||| ||||| | | ||| | |||||||| | | ||||||||||| ||||||||||||||||||| ||| | |||| | ||| | |
|
|
| T |
7099574 |
gatcatgcattttgaaagaaatcactcttgaataatcatccatatggatgtcttgaaagaaagatttttggtacaattcattccaaatcatgtttccaac |
7099673 |
T |
|
| Q |
833 |
atcttcaacctccgtattacccctagatgaaatcaatccattagccatccaaagccaaatcaattcttcctttaggatttctgcatctttgggaaatata |
932 |
Q |
| |
|
||||||||||||| ||| ||||||||||| |||||||||||||||||||| ||||||||||||||| | ||||| || ||||||| |||||||| |
|
|
| T |
7099674 |
atcttcaacctccaaattttttctagatgaaataaatccattagccatccaaagatgaatcaattcttccttcatgatttttgtatctttgcgaaatata |
7099773 |
T |
|
| Q |
933 |
gcacaaaaagagaaacattgttttagggctgccggtaaataaaagtaactcaacctcaaagcaggcaaaatggaattttcatctgataaatcccaaagtt |
1032 |
Q |
| |
|
|||||||||| |||||||||||||| || || | ||||| ||||| |||||||||||||| |||||||| ||||| || | | |||| |||| | | |
|
|
| T |
7099774 |
gcacaaaaagcgaaacattgttttaaggttggtgataaatggaagtagctcaacctcaaagctggcaaaatagaattctcgtgcggtaaagcccagatct |
7099873 |
T |
|
| Q |
1033 |
cactgtctttaattttaagccattccttttcatctttccttgagttcattaaacttcccaatgattttgctgcaagaggcaatccattgcatttctttac |
1132 |
Q |
| |
|
|||| |||||||||| | |||| | ||||| || | ||||| | ||||| || || |||| || |||||||||||||||||| || || ||||| |
|
|
| T |
7099874 |
cactctctttaatttctaaccatgctttttcttcacttcttgaatgcattagacaccctaatgcttgtgctgcaagaggcaatcctccacacttttttac |
7099973 |
T |
|
| Q |
1133 |
tatctcctttcctattgccacgagatcagcacgctcttctttgtgatgtcca |
1184 |
Q |
| |
|
||||||||| |||||| ||| || ||||||||||||||| ||| ||||||| |
|
|
| T |
7099974 |
tatctccttgcctattttcacaagctcagcacgctcttctctgtaatgtcca |
7100025 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 99; E-Value: 3e-48
Query Start/End: Original strand, 53 - 347
Target Start/End: Original strand, 7098897 - 7099191
Alignment:
| Q |
53 |
ccatgacaagcataattcatgaaggtcttttttacccatcaaattagccgtttcagcttcagataaactaccaacattgtttaatcctttgatactcagt |
152 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||||||| ||||| || || |||||||||||||||||||||||| | ||| |||||||| ||| |
|
|
| T |
7098897 |
ccatgacaagcataattcatcgaggtcttttttacccattaaattggcttctttagcttcagataaactaccaacattttgtaagcctttgatctccagc |
7098996 |
T |
|
| Q |
153 |
tttccaccgaggtttagatcacgtaactctgtcaagctattccctctctctaaactaacaatgtacacacttaatgttcttagacaagttaattttccaa |
252 |
Q |
| |
|
||||| || | ||||||||||||||||||| ||||||| ||| |||| ||| ||||||| || |||||||| ||||||| |||| ||||||||||| |
|
|
| T |
7098997 |
tttcctcctaaatttagatcacgtaactctgctaagctatgtcctttctcgaaattaacaatataaacacttaaggttcttaagcaagataattttccaa |
7099096 |
T |
|
| Q |
253 |
tgttgggaaacatacgagacaaagatgaacaatattcaatgactatatgtctaagattttgtaaacaaaccaagcgtttcggaagacaactcagt |
347 |
Q |
| |
|
||| |||||||| |||||||| || |||| |||||||| || |||||||||||||||||| ||| |||| ||| ||||||||||||||| |
|
|
| T |
7099097 |
tgtgaggaaacatgcgagacaatgaattacaaccttcaatgattaaatgtctaagattttgtaagcaagacaagtgttctggaagacaactcagt |
7099191 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 53 - 346
Target Start/End: Complemental strand, 7582349 - 7582056
Alignment:
| Q |
53 |
ccatgacaagcataattcatgaaggtcttttttacccatcaaattagccgtttcagcttcagataaactaccaacattgtttaatcctttgatactcagt |
152 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||||||||| || || || |||||||||||||||||| ||||| ||| ||| |||| ||| |
|
|
| T |
7582349 |
ccatgacaagcataattcatcgaggtcttttttacccatcaagttggcttcttgagcttcagataaactaccgacatttggtaagcctctgatctccagc |
7582250 |
T |
|
| Q |
153 |
tttccaccgaggtttagatcacgtaactctgtcaagctattccctctctctaaactaacaatgtacacacttaatgttcttagacaagttaattttccaa |
252 |
Q |
| |
|
||||| || | |||||||||||||||||| | ||||||| ||| |||| || | ||||| || |||||||||||||||| |||| ||||||||||| |
|
|
| T |
7582249 |
tttcctcctaagtttagatcacgtaactccgctaagctatgtcctttctcggaatttacaatataaacacttaatgttcttaagcaagataattttccaa |
7582150 |
T |
|
| Q |
253 |
tgttgggaaacatacgagacaa-agatgaacaatattcaatgactatatgtctaagattttgtaaacaaaccaagcgtttcggaagacaactcag |
346 |
Q |
| |
|
| ||||||| |||||||| | |||| |||| ||||||||||| |||||||||||||||||| ||| |||| ||| ||||||||||||||| |
|
|
| T |
7582149 |
catgacgaaacatgcgagacaacaaatga-caatcttcaatgactaaatgtctaagattttgtaagcaagacaagtgttccggaagacaactcag |
7582056 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 94; Significance: 3e-45; HSPs: 3)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 94; E-Value: 3e-45
Query Start/End: Original strand, 281 - 534
Target Start/End: Complemental strand, 25294271 - 25294018
Alignment:
| Q |
281 |
acaatattcaatgactatatgtctaagattttgtaaacaaaccaagcgtttcggaagacaactcagtgaatcacacttttttattttcaagatttccagt |
380 |
Q |
| |
|
|||| ||| ||||| || |||||||||||||||||| ||| |||| |||| ||||||| ||||||| |||| | | ||||||||| |||||||||||| |
|
|
| T |
25294271 |
acaacattgaatgattagatgtctaagattttgtaagcaagccaaatgttttggaagaccactcagtttatcataatattttatttttaagatttccagt |
25294172 |
T |
|
| Q |
381 |
ttttgtaagttgtaaattgagttaggcaacttttttatatcaagagaacgaagttccaaataccttaaatgaattaaactacctagtaatggctctcgga |
480 |
Q |
| |
|
||| ||||||||||||||||| || |||| ||||||| ||||||||| |||| |||||||||||||||||||||| || |||| | |||| || ||| |
|
|
| T |
25294171 |
atttttaagttgtaaattgagtcagacaacatttttatgtcaagagaataaagtgccaaataccttaaatgaattaagcttcctattgatggtacttgga |
25294072 |
T |
|
| Q |
481 |
taaaggttatgcgtaaaacccgaagagaaaggtttgttgggaagtaatcatgtt |
534 |
Q |
| |
|
|||||| | ||| |||||| |||||| || ||||||||| ||||| |||||||| |
|
|
| T |
25294071 |
taaaggatgtgcataaaactcgaagacaacggtttgttgagaagtgatcatgtt |
25294018 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 80; E-Value: 6e-37
Query Start/End: Original strand, 782 - 1009
Target Start/End: Complemental strand, 25293828 - 25293601
Alignment:
| Q |
782 |
atcttgaaagaatgatttttggtacaattcatcccacaccatgatgccagcatcttcaacctccgtattacccctagatgaaatcaatccattagccatc |
881 |
Q |
| |
|
|||||||||||||||||||||| ||||||||| ||| |||||| ||||| |||||||||||||| ||| ||||||||||||| ||||||||||||||| |
|
|
| T |
25293828 |
atcttgaaagaatgatttttggcacaattcattccaaaccatgctgccaacatcttcaacctccaaattttccctagatgaaataaatccattagccatc |
25293729 |
T |
|
| Q |
882 |
caaagccaaatcaattcttcctttaggatttctgcatctttgggaaatatagcacaaaaagagaaacattgttttagggctgccggtaaataaaagtaac |
981 |
Q |
| |
|
||||| | ||||||||||||| ||||| || |||||| ||||| ||||||||||||| |||||| | |||| || | | |||||||||||| | |
|
|
| T |
25293728 |
caaagatgagtcaattcttccttatcgatttttgtatcttttggaaacatagcacaaaaagcaaaacatcgctttaaggtcggagttaaataaaagtagc |
25293629 |
T |
|
| Q |
982 |
tcaacctcaaagcaggcaaaatggaatt |
1009 |
Q |
| |
|
|||||| ||| | ||| ||||| ||||| |
|
|
| T |
25293628 |
tcaaccacaaggaaggaaaaatagaatt |
25293601 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 711 - 748
Target Start/End: Original strand, 8187165 - 8187202
Alignment:
| Q |
711 |
gattgagcaagatcatggacaagatcatgcatcttgaa |
748 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
8187165 |
gattgagcaagatcatgtacaagatcatgcatcttgaa |
8187202 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University