View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11928_high_66 (Length: 317)
Name: NF11928_high_66
Description: NF11928
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11928_high_66 |
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Alignment Details
Target: chr7 (Bit Score: 281; Significance: 1e-157; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 281; E-Value: 1e-157
Query Start/End: Original strand, 1 - 300
Target Start/End: Original strand, 36885258 - 36885560
Alignment:
| Q |
1 |
ttcccagcaatcctattttagagtggagggaatgattactttcatgtgttcacttttgtttgatgaaataaaatatggtgatcaaactcataatagttgt |
100 |
Q |
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| T |
36885258 |
ttcccagcaatcctattttagagtggagggaatgattactttcatgtgttcacttttgtttgatgaaataaaatatggtgatcaaactcataatagttgt |
36885357 |
T |
|
| Q |
101 |
tcactaaccataaattttttatgtgctgaaaatgacgtggaagaaggccactgaacagattatcttgaatgttcctggcaagacagacaaataagcaaa- |
199 |
Q |
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| T |
36885358 |
tcactaaccataaattttttatgtgctgaaaatgacgtggaagaaggccactgaacagattatcttgaatgttcctggcaagacagacaaataagcaaat |
36885457 |
T |
|
| Q |
200 |
--tagtagaagtgtaaacatatattgggaaaatgttagagataatcctacaaatctgtaagtgggagtttggccaggtaggcaactgatccagtgaattt |
297 |
Q |
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| T |
36885458 |
agtagtagaactgtaaacatatattgggaaaatgttagagataatcctacaaatctgtaagtgggagttcggccaggtaggcaactgatccagtgaattt |
36885557 |
T |
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| Q |
298 |
gtt |
300 |
Q |
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||| |
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| T |
36885558 |
gtt |
36885560 |
T |
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