View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11928_high_77 (Length: 280)
Name: NF11928_high_77
Description: NF11928
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11928_high_77 |
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Alignment Details
Target: chr8 (Bit Score: 241; Significance: 1e-133; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 14 - 262
Target Start/End: Original strand, 35110988 - 35111236
Alignment:
| Q |
14 |
gatgaatggatactacaaggtaatgtgcttatcaaaatacaaacctttcccaatacctttttgtcaatgttgttcaatcatatagttaaaccaaccttca |
113 |
Q |
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| T |
35110988 |
gatgaatggatactacaaggtaatgtgcttatcaaaatacaaacctttcccaatacctttttgtcaatgttgttcaatcatatagttaaaccaaccttca |
35111087 |
T |
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| Q |
114 |
ttggcattcatgaaacatcaaacaccttttacatgatattcaaacaaccctgtcaaaagtataggagtctataagcgtagcgtatttcacaattcatagg |
213 |
Q |
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||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35111088 |
ttggcattcatgacacatcaaacaccttttccatgatattcaaacaaccctgtcaaaagtataggagtctataagcgtagcgtatttcacaattcatagg |
35111187 |
T |
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| Q |
214 |
cacatcatgtgattttattgatgttttctggatgaagtcatgatagtta |
262 |
Q |
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| T |
35111188 |
cacatcatgtgattttattgatgttttctggatgaagtcatgatagtta |
35111236 |
T |
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