View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11928_low_109 (Length: 231)

Name: NF11928_low_109
Description: NF11928
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11928_low_109
NF11928_low_109
[»] chr6 (18 HSPs)
chr6 (19-231)||(22880943-22881155)
chr6 (19-231)||(22898878-22899090)
chr6 (161-231)||(17225296-17225366)
chr6 (161-231)||(390858-390928)
chr6 (161-231)||(7405469-7405539)
chr6 (161-231)||(34639093-34639163)
chr6 (161-228)||(885655-885722)
chr6 (161-231)||(24949684-24949754)
chr6 (161-231)||(30686569-30686639)
chr6 (161-231)||(31971083-31971153)
chr6 (161-231)||(33859515-33859585)
chr6 (161-230)||(6801604-6801673)
chr6 (161-228)||(6047849-6047916)
chr6 (161-228)||(766480-766547)
chr6 (162-225)||(13144263-13144326)
chr6 (176-231)||(14931283-14931338)
chr6 (165-231)||(6045738-6045804)
chr6 (161-231)||(8558967-8559036)
[»] chr8 (30 HSPs)
chr8 (161-231)||(2229123-2229193)
chr8 (161-231)||(43135069-43135139)
chr8 (161-231)||(2339315-2339385)
chr8 (161-231)||(25847992-25848062)
chr8 (161-230)||(22781908-22781977)
chr8 (161-230)||(34028409-34028478)
chr8 (161-228)||(40465291-40465358)
chr8 (161-231)||(7668216-7668286)
chr8 (161-231)||(29563683-29563753)
chr8 (161-231)||(30923974-30924044)
chr8 (165-228)||(33642486-33642549)
chr8 (161-231)||(32159087-32159157)
chr8 (165-231)||(33837605-33837671)
chr8 (165-231)||(42351255-42351321)
chr8 (161-230)||(41569149-41569218)
chr8 (166-231)||(45145894-45145959)
chr8 (161-221)||(34157696-34157756)
chr8 (161-221)||(40834171-40834231)
chr8 (161-231)||(8242248-8242318)
chr8 (173-231)||(12270121-12270179)
chr8 (161-231)||(37564684-37564754)
chr8 (161-231)||(41915619-41915689)
chr8 (161-231)||(42189828-42189898)
chr8 (161-223)||(43295116-43295178)
chr8 (161-231)||(3799769-3799840)
chr8 (161-228)||(27793225-27793292)
chr8 (161-231)||(11293240-11293310)
chr8 (161-230)||(25878225-25878293)
chr8 (188-223)||(12270089-12270124)
chr8 (168-230)||(29916553-29916616)
[»] chr5 (33 HSPs)
chr5 (161-231)||(37699833-37699903)
chr5 (161-231)||(1108308-1108378)
chr5 (161-231)||(13144905-13144975)
chr5 (161-231)||(25027719-25027789)
chr5 (161-231)||(29374195-29374265)
chr5 (161-231)||(36419038-36419108)
chr5 (161-231)||(41989589-41989659)
chr5 (161-230)||(7945863-7945932)
chr5 (161-231)||(6338368-6338438)
chr5 (161-231)||(26898216-26898286)
chr5 (161-230)||(904019-904088)
chr5 (161-230)||(18353261-18353330)
chr5 (161-230)||(36417100-36417169)
chr5 (161-231)||(1643369-1643439)
chr5 (161-231)||(7053673-7053743)
chr5 (161-231)||(7749943-7750013)
chr5 (161-231)||(21090429-21090499)
chr5 (165-230)||(23411191-23411256)
chr5 (161-230)||(31803011-31803080)
chr5 (161-231)||(9601646-9601716)
chr5 (161-231)||(15569384-15569454)
chr5 (165-231)||(41046853-41046919)
chr5 (161-231)||(42311863-42311933)
chr5 (161-230)||(2959292-2959361)
chr5 (161-230)||(2967761-2967830)
chr5 (161-230)||(21610354-21610423)
chr5 (161-230)||(41815211-41815280)
chr5 (161-221)||(2825895-2825955)
chr5 (173-231)||(20578720-20578778)
chr5 (161-230)||(6910738-6910807)
chr5 (161-221)||(16089140-16089200)
chr5 (188-223)||(21610334-21610369)
chr5 (165-230)||(38393812-38393877)
[»] chr4 (38 HSPs)
chr4 (161-231)||(49122573-49122643)
chr4 (19-72)||(23187064-23187117)
chr4 (161-231)||(18135366-18135436)
chr4 (161-231)||(23125671-23125741)
chr4 (161-231)||(36099512-36099582)
chr4 (161-231)||(47948964-47949034)
chr4 (161-230)||(2411893-2411962)
chr4 (161-230)||(31227297-31227366)
chr4 (161-228)||(35328967-35329034)
chr4 (161-231)||(2279549-2279619)
chr4 (161-231)||(5970332-5970402)
chr4 (165-231)||(7350263-7350329)
chr4 (161-231)||(18430308-18430378)
chr4 (161-231)||(39834299-39834369)
chr4 (161-231)||(53621381-53621451)
chr4 (161-230)||(31854432-31854501)
chr4 (161-230)||(38687964-38688033)
chr4 (161-231)||(2385248-2385318)
chr4 (161-231)||(4758830-4758900)
chr4 (165-231)||(6246633-6246699)
chr4 (161-227)||(39877432-39877498)
chr4 (161-230)||(19485598-19485667)
chr4 (165-230)||(21221143-21221208)
chr4 (161-217)||(20688455-20688511)
chr4 (161-231)||(580464-580534)
chr4 (161-231)||(3085925-3085995)
chr4 (161-231)||(51833037-51833107)
chr4 (161-231)||(53303761-53303831)
chr4 (161-231)||(56216259-56216329)
chr4 (176-230)||(15170951-15171005)
chr4 (161-219)||(21229262-21229320)
chr4 (161-231)||(44200025-44200095)
chr4 (161-230)||(55292165-55292234)
chr4 (175-231)||(27006530-27006586)
chr4 (165-230)||(4698649-4698714)
chr4 (161-230)||(52536004-52536073)
chr4 (188-228)||(29833293-29833333)
chr4 (187-223)||(56216313-56216349)
[»] chr3 (36 HSPs)
chr3 (161-231)||(6086954-6087024)
chr3 (161-231)||(10049693-10049763)
chr3 (161-231)||(8243735-8243805)
chr3 (161-231)||(9440181-9440251)
chr3 (161-231)||(26999046-26999116)
chr3 (161-231)||(47449941-47450011)
chr3 (161-230)||(335428-335497)
chr3 (165-231)||(14768123-14768189)
chr3 (164-230)||(19202306-19202372)
chr3 (161-231)||(25846564-25846634)
chr3 (161-231)||(40464547-40464617)
chr3 (161-231)||(42605880-42605950)
chr3 (161-231)||(49122969-49123039)
chr3 (161-231)||(52114077-52114147)
chr3 (161-226)||(1122305-1122370)
chr3 (161-230)||(18765311-18765380)
chr3 (161-230)||(42225615-42225684)
chr3 (161-231)||(9465124-9465194)
chr3 (161-231)||(21653397-21653467)
chr3 (165-231)||(22003821-22003887)
chr3 (165-231)||(22011338-22011404)
chr3 (161-231)||(25113402-25113472)
chr3 (161-231)||(28945681-28945751)
chr3 (165-231)||(29019760-29019826)
chr3 (161-230)||(23825175-23825244)
chr3 (161-231)||(28564988-28565058)
chr3 (164-230)||(40141930-40141996)
chr3 (161-231)||(40214953-40215023)
chr3 (161-231)||(51698167-51698237)
chr3 (161-227)||(9190057-9190123)
chr3 (165-225)||(8825762-8825822)
chr3 (162-227)||(16660334-16660401)
chr3 (161-225)||(39341428-39341492)
chr3 (161-227)||(13826141-13826207)
chr3 (165-230)||(55139199-55139264)
chr3 (188-228)||(29019815-29019855)
[»] chr2 (28 HSPs)
chr2 (161-231)||(16241320-16241390)
chr2 (161-231)||(25891997-25892067)
chr2 (161-231)||(6761490-6761560)
chr2 (161-231)||(18452594-18452664)
chr2 (161-231)||(29866107-29866177)
chr2 (161-231)||(40430719-40430789)
chr2 (161-230)||(42263523-42263592)
chr2 (161-231)||(1944587-1944657)
chr2 (161-231)||(11363051-11363121)
chr2 (161-231)||(41260050-41260120)
chr2 (161-228)||(43657978-43658045)
chr2 (161-231)||(7765847-7765917)
chr2 (161-231)||(20427026-20427096)
chr2 (165-231)||(30864732-30864798)
chr2 (165-231)||(32880932-32880998)
chr2 (161-231)||(45065633-45065703)
chr2 (161-230)||(32197402-32197471)
chr2 (161-221)||(2100052-2100112)
chr2 (161-228)||(13775739-13775806)
chr2 (161-231)||(11711377-11711447)
chr2 (161-231)||(42341643-42341713)
chr2 (161-231)||(44737336-44737405)
chr2 (165-231)||(38598481-38598547)
chr2 (161-231)||(3264947-3265013)
chr2 (161-230)||(4740736-4740805)
chr2 (161-225)||(32750395-32750459)
chr2 (197-226)||(38598545-38598574)
chr2 (185-221)||(40255508-40255544)
[»] chr1 (28 HSPs)
chr1 (161-231)||(14281615-14281685)
chr1 (162-231)||(24594972-24595041)
chr1 (161-231)||(9301972-9302042)
chr1 (161-231)||(23398105-23398175)
chr1 (165-231)||(38830508-38830574)
chr1 (161-231)||(2352334-2352404)
chr1 (161-231)||(2961157-2961227)
chr1 (161-231)||(10380443-10380513)
chr1 (165-231)||(1674029-1674095)
chr1 (161-231)||(7796143-7796213)
chr1 (161-231)||(29312464-29312534)
chr1 (161-231)||(40161226-40161296)
chr1 (161-230)||(6784685-6784754)
chr1 (161-230)||(10065308-10065377)
chr1 (161-230)||(26545023-26545092)
chr1 (165-230)||(28359128-28359193)
chr1 (161-230)||(28989298-28989367)
chr1 (165-225)||(30264831-30264891)
chr1 (161-231)||(15289798-15289868)
chr1 (161-231)||(26550340-26550410)
chr1 (161-230)||(9548698-9548767)
chr1 (161-228)||(45536216-45536283)
chr1 (173-231)||(23537386-23537444)
chr1 (161-231)||(33325358-33325428)
chr1 (161-231)||(34718916-34718986)
chr1 (165-230)||(26733811-26733876)
chr1 (161-231)||(24463315-24463384)
chr1 (21-69)||(26925813-26925861)
[»] scaffold0144 (1 HSPs)
scaffold0144 (161-231)||(38850-38920)
[»] chr7 (21 HSPs)
chr7 (161-231)||(12763254-12763324)
chr7 (161-231)||(30866270-30866340)
chr7 (161-231)||(34281722-34281792)
chr7 (161-230)||(19979547-19979616)
chr7 (161-231)||(3411357-3411427)
chr7 (161-231)||(5909524-5909594)
chr7 (165-231)||(23248725-23248791)
chr7 (161-231)||(29770347-29770417)
chr7 (161-231)||(35427712-35427782)
chr7 (161-231)||(5347776-5347845)
chr7 (161-231)||(20397840-20397910)
chr7 (161-230)||(46680882-46680951)
chr7 (161-231)||(12426583-12426653)
chr7 (161-231)||(32050133-32050203)
chr7 (19-114)||(9417473-9417570)
chr7 (161-231)||(10599369-10599439)
chr7 (161-230)||(7463475-7463544)
chr7 (188-223)||(23248701-23248736)
chr7 (165-231)||(7107655-7107721)
chr7 (161-231)||(12085077-12085147)
chr7 (161-214)||(15074659-15074712)
[»] scaffold2107 (1 HSPs)
scaffold2107 (161-230)||(469-538)
[»] scaffold0123 (1 HSPs)
scaffold0123 (161-230)||(29270-29339)
[»] scaffold0002 (1 HSPs)
scaffold0002 (161-230)||(492358-492427)
[»] scaffold0592 (1 HSPs)
scaffold0592 (161-228)||(407-474)
[»] scaffold0024 (1 HSPs)
scaffold0024 (161-231)||(35979-36049)
[»] scaffold0221 (1 HSPs)
scaffold0221 (165-231)||(11055-11121)
[»] scaffold0246 (1 HSPs)
scaffold0246 (173-230)||(15181-15238)
[»] scaffold0067 (2 HSPs)
scaffold0067 (165-230)||(5242-5307)
scaffold0067 (188-228)||(5296-5336)
[»] scaffold0007 (1 HSPs)
scaffold0007 (165-221)||(77402-77458)
[»] scaffold0009 (1 HSPs)
scaffold0009 (161-231)||(3684-3763)


Alignment Details
Target: chr6 (Bit Score: 205; Significance: 1e-112; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 19 - 231
Target Start/End: Complemental strand, 22881155 - 22880943
Alignment:
Q  19 attgtggtatagctgtcatatgagaacaaatgagtgagttttgagcacttgtcacctgagaaaaatatataacgcacaaggaaaaaatattgtgaatgaa 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22881155 attgtggtatagctgtcatatgagaacaaatgagtgagttttgagcacttgtcacctgagaaaaatatataacgcacaaggaaaaaatattgtgaatgaa 22881056  T
Q  119 ccaagctgaactaaatattgagttgtaaaaagtaaattattcaatgtatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaa 218  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  22881055 ccaagctgaactaaatattgagttgtaaaaagtaaattattccatgtatgtatatagtcaagaacctaaactaaatatataaattattcaatgtatctaa 22880956  T
Q  219 aaagtaaattgtc 231  Q
    |||||||||||||    
T  22880955 aaagtaaattgtc 22880943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 19 - 231
Target Start/End: Complemental strand, 22899090 - 22898878
Alignment:
Q  19 attgtggtatagctgtcatatgagaacaaatgagtgagttttgagcacttgtcacctgagaaaaatatataacgcacaaggaaaaaatattgtgaatgaa 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22899090 attgtggtatagctgtcatatgagaacaaatgagtgagttttgagcacttgtcacctgagaaaaatatataacgcacaaggaaaaaatattgtgaatgaa 22898991  T
Q  119 ccaagctgaactaaatattgagttgtaaaaagtaaattattcaatgtatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaa 218  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||    
T  22898990 ccaagctgaactaaatattgagttgtaaaaagtaaattattcaatgtatgtatatagtcaagaacctaaaccaaatatataaattattcaatgtatctaa 22898891  T
Q  219 aaagtaaattgtc 231  Q
    |||||||||||||    
T  22898890 aaagtaaattgtc 22898878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 161 - 231
Target Start/End: Original strand, 17225296 - 17225366
Alignment:
Q  161 aatgtatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaattgtc 231  Q
    ||||||||||| ||||||||||||||||| ||||||||| |||||| ||||||||||||||||||||||||    
T  17225296 aatgtatgtatctagtcaagaacctaaaccaaatatataaattatttaatgtatctaaaaagtaaattgtc 17225366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 161 - 231
Target Start/End: Original strand, 390858 - 390928
Alignment:
Q  161 aatgtatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaattgtc 231  Q
    ||||||||||| ||||||||||||||||| ||||| ||| |||||| ||||||||||||||||||||||||    
T  390858 aatgtatgtatctagtcaagaacctaaaccaaatacataaattatttaatgtatctaaaaagtaaattgtc 390928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 161 - 231
Target Start/End: Complemental strand, 7405539 - 7405469
Alignment:
Q  161 aatgtatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaattgtc 231  Q
    ||||||||||| ||||||||||||||||| ||||| ||| |||||| ||||||||||||||||||||||||    
T  7405539 aatgtatgtatctagtcaagaacctaaaccaaatacataaattatttaatgtatctaaaaagtaaattgtc 7405469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 161 - 231
Target Start/End: Original strand, 34639093 - 34639163
Alignment:
Q  161 aatgtatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaattgtc 231  Q
    ||||||||||| ||||||||||||||||| ||||| ||| ||| |||||||||||||||||||||||||||    
T  34639093 aatgtatgtatctagtcaagaacctaaaccaaatacataaatttttcaatgtatctaaaaagtaaattgtc 34639163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 161 - 228
Target Start/End: Original strand, 885655 - 885722
Alignment:
Q  161 aatgtatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaatt 228  Q
    ||||||||||| ||||||||||||||||| ||||| ||| |||||| |||||||||||||||||||||    
T  885655 aatgtatgtatctagtcaagaacctaaaccaaatacataaattatttaatgtatctaaaaagtaaatt 885722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 161 - 231
Target Start/End: Original strand, 24949684 - 24949754
Alignment:
Q  161 aatgtatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaattgtc 231  Q
    ||||||||||| ||||||||||| ||||| ||||| ||| |||||| ||||||||||||||||||||||||    
T  24949684 aatgtatgtatctagtcaagaacataaaccaaatacataaattatttaatgtatctaaaaagtaaattgtc 24949754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 161 - 231
Target Start/End: Complemental strand, 30686639 - 30686569
Alignment:
Q  161 aatgtatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaattgtc 231  Q
    ||||||||||| ||||||| ||||||||| ||||| ||| |||||| ||||||||||||||||||||||||    
T  30686639 aatgtatgtatctagtcaaaaacctaaacgaaatacataaattatttaatgtatctaaaaagtaaattgtc 30686569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 161 - 231
Target Start/End: Original strand, 31971083 - 31971153
Alignment:
Q  161 aatgtatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaattgtc 231  Q
    ||||||||||| ||||||||||||||||| ||||| ||| |||||| ||||||||||||| ||||||||||    
T  31971083 aatgtatgtatctagtcaagaacctaaaccaaatacataaattatttaatgtatctaaaatgtaaattgtc 31971153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 161 - 231
Target Start/End: Complemental strand, 33859585 - 33859515
Alignment:
Q  161 aatgtatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaattgtc 231  Q
    ||||||||||| |||||||||| |||||| ||||| ||| |||||| ||||||||||||||||||||||||    
T  33859585 aatgtatgtatctagtcaagaaactaaaccaaatacataaattatttaatgtatctaaaaagtaaattgtc 33859515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 161 - 230
Target Start/End: Original strand, 6801604 - 6801673
Alignment:
Q  161 aatgtatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaattgt 230  Q
    ||||||||||| ||||||||||||||||| ||||| ||  |||||| |||||||||||||||||||||||    
T  6801604 aatgtatgtatctagtcaagaacctaaaccaaatacatgaattatttaatgtatctaaaaagtaaattgt 6801673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 161 - 228
Target Start/End: Original strand, 6047849 - 6047916
Alignment:
Q  161 aatgtatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaatt 228  Q
    ||||||||||| ||||||||||||||||  ||||| ||| |||||| |||||||||||||||||||||    
T  6047849 aatgtatgtatctagtcaagaacctaaatcaaatacataaattatttaatgtatctaaaaagtaaatt 6047916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 161 - 228
Target Start/End: Original strand, 766480 - 766547
Alignment:
Q  161 aatgtatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaatt 228  Q
    ||||||||||| ||||||| ||||||||| ||||| ||| |||||| |||||||||||||| ||||||    
T  766480 aatgtatgtatttagtcaataacctaaaccaaatacataaattatttaatgtatctaaaaaataaatt 766547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 162 - 225
Target Start/End: Original strand, 13144263 - 13144326
Alignment:
Q  162 atgtatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaa 225  Q
    ||||||||||  |||||||||||||||| ||||| ||| |||||| ||||||||||||||||||    
T  13144263 atgtatgtatcaagtcaagaacctaaacaaaatacataaattatttaatgtatctaaaaagtaa 13144326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 176 - 231
Target Start/End: Complemental strand, 14931338 - 14931283
Alignment:
Q  176 tcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaattgtc 231  Q
    |||| ||||||||| ||||| ||| |||||| ||||||||||||||||||||||||    
T  14931338 tcaaaaacctaaaccaaatacataaattatttaatgtatctaaaaagtaaattgtc 14931283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 165 - 231
Target Start/End: Original strand, 6045738 - 6045804
Alignment:
Q  165 tatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaattgtc 231  Q
    ||||||| |||||||||| |||||  ||||| ||| |||||| ||| ||||||||||||||||||||    
T  6045738 tatgtatctagtcaagaatctaaatcaaatacataaattatttaatctatctaaaaagtaaattgtc 6045804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 161 - 231
Target Start/End: Original strand, 8558967 - 8559036
Alignment:
Q  161 aatgtatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaattgtc 231  Q
    ||||||||||| |||| |||||||||||| ||||| ||| ||||||  ||||||||||||| |||||||||    
T  8558967 aatgtatgtatctagttaagaacctaaaccaaatacataaattatt-tatgtatctaaaaaataaattgtc 8559036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 55; Significance: 9e-23; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 161 - 231
Target Start/End: Original strand, 2229123 - 2229193
Alignment:
Q  161 aatgtatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaattgtc 231  Q
    ||||||||||| ||||||||||||||||| ||||| ||| |||||||||||||||||||||||||||||||    
T  2229123 aatgtatgtatctagtcaagaacctaaaccaaatacataaattattcaatgtatctaaaaagtaaattgtc 2229193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 161 - 231
Target Start/End: Complemental strand, 43135139 - 43135069
Alignment:
Q  161 aatgtatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaattgtc 231  Q
    ||||||||||| ||||||||||||||||| ||||| ||| |||||||||||||||||||||||||||||||    
T  43135139 aatgtatgtatctagtcaagaacctaaaccaaatacataaattattcaatgtatctaaaaagtaaattgtc 43135069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 161 - 231
Target Start/End: Complemental strand, 2339385 - 2339315
Alignment:
Q  161 aatgtatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaattgtc 231  Q
    ||||||||||| ||||||||||||||||| ||||| ||| |||||| ||||||||||||||||||||||||    
T  2339385 aatgtatgtatctagtcaagaacctaaaccaaatacataaattatttaatgtatctaaaaagtaaattgtc 2339315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 161 - 231
Target Start/End: Complemental strand, 25848062 - 25847992
Alignment:
Q  161 aatgtatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaattgtc 231  Q
    ||||||||||| ||||||||||||||||| ||||| ||| |||||| ||||||||||||||||||||||||    
T  25848062 aatgtatgtatttagtcaagaacctaaaccaaatacataaattatttaatgtatctaaaaagtaaattgtc 25847992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 161 - 230
Target Start/End: Complemental strand, 22781977 - 22781908
Alignment:
Q  161 aatgtatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaattgt 230  Q
    ||||||||||| ||||||||||||||||| ||||| ||| |||||| |||||||||||||||||||||||    
T  22781977 aatgtatgtatctagtcaagaacctaaaccaaatacataaattatttaatgtatctaaaaagtaaattgt 22781908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 161 - 230
Target Start/End: Complemental strand, 34028478 - 34028409
Alignment:
Q  161 aatgtatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaattgt 230  Q
    ||||||||||| ||||||||||||||||| ||||| ||| |||||| |||||||||||||||||||||||    
T  34028478 aatgtatgtatctagtcaagaacctaaaccaaatacataaattatttaatgtatctaaaaagtaaattgt 34028409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 161 - 228
Target Start/End: Original strand, 40465291 - 40465358
Alignment:
Q  161 aatgtatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaatt 228  Q
    ||||||||||| ||||||||||||||||| ||||| ||| |||||| |||||||||||||||||||||    
T  40465291 aatgtatgtatctagtcaagaacctaaaccaaatacataaattatttaatgtatctaaaaagtaaatt 40465358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 161 - 231
Target Start/End: Complemental strand, 7668286 - 7668216
Alignment:
Q  161 aatgtatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaattgtc 231  Q
    ||||||||||| ||||||||||||||||| ||||| ||| |||||| |||||||||||||| |||||||||    
T  7668286 aatgtatgtatttagtcaagaacctaaaccaaatacataaattatttaatgtatctaaaaaataaattgtc 7668216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 161 - 231
Target Start/End: Complemental strand, 29563753 - 29563683
Alignment:
Q  161 aatgtatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaattgtc 231  Q
    ||||||||||| |||| |||||||||||| ||||| ||| |||||| ||||||||||||||||||||||||    
T  29563753 aatgtatgtatctagttaagaacctaaaccaaatacataaattatttaatgtatctaaaaagtaaattgtc 29563683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 161 - 231
Target Start/End: Original strand, 30923974 - 30924044
Alignment:
Q  161 aatgtatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaattgtc 231  Q
    ||||||||||| || |||||||||||||| ||||| ||| |||||| ||||||||||||||||||||||||    
T  30923974 aatgtatgtatctaatcaagaacctaaaccaaatacataaattatttaatgtatctaaaaagtaaattgtc 30924044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 165 - 228
Target Start/End: Complemental strand, 33642549 - 33642486
Alignment:
Q  165 tatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaatt 228  Q
    ||||||| ||||||||||||||||| ||||| ||| |||||| |||||||||||||||||||||    
T  33642549 tatgtatctagtcaagaacctaaaccaaatacataaattatttaatgtatctaaaaagtaaatt 33642486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 161 - 231
Target Start/End: Original strand, 32159087 - 32159157
Alignment:
Q  161 aatgtatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaattgtc 231  Q
    ||||||||||| || ||||||| |||||| ||||| ||| |||||| ||||||||||||||||||||||||    
T  32159087 aatgtatgtatctaatcaagaatctaaaccaaatacataaattatttaatgtatctaaaaagtaaattgtc 32159157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 165 - 231
Target Start/End: Complemental strand, 33837671 - 33837605
Alignment:
Q  165 tatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaattgtc 231  Q
    ||||||| |||||||||| |||||||||||  ||| |||||| ||||||||||||||||||||||||    
T  33837671 tatgtatctagtcaagaatctaaactaaatgcataaattatttaatgtatctaaaaagtaaattgtc 33837605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 165 - 231
Target Start/End: Original strand, 42351255 - 42351321
Alignment:
Q  165 tatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaattgtc 231  Q
    ||||||| ||||||||||||||||  ||||||||| |||||| |||||||||||||| |||||||||    
T  42351255 tatgtatctagtcaagaacctaaatcaaatatataaattatttaatgtatctaaaaaataaattgtc 42351321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 161 - 230
Target Start/End: Original strand, 41569149 - 41569218
Alignment:
Q  161 aatgtatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaattgt 230  Q
    ||||||||||| ||||||||||||| ||| ||||| ||| |||||| ||| |||||||||||||||||||    
T  41569149 aatgtatgtatctagtcaagaacctcaaccaaatacataaattatttaatatatctaaaaagtaaattgt 41569218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 166 - 231
Target Start/End: Complemental strand, 45145959 - 45145894
Alignment:
Q  166 atgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaattgtc 231  Q
    |||||| ||||||||||||||||| ||| | ||| |||||| ||||||||||||||||||||||||    
T  45145959 atgtatgtagtcaagaacctaaaccaaaaacataaattatttaatgtatctaaaaagtaaattgtc 45145894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 161 - 221
Target Start/End: Complemental strand, 34157756 - 34157696
Alignment:
Q  161 aatgtatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaa 221  Q
    ||||||||||| ||||||||||||||||| ||||| ||| |||||| ||||||||||||||    
T  34157756 aatgtatgtatttagtcaagaacctaaaccaaatacataaattatttaatgtatctaaaaa 34157696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 161 - 221
Target Start/End: Complemental strand, 40834231 - 40834171
Alignment:
Q  161 aatgtatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaa 221  Q
    ||||||||||| ||||||||||||||||| ||||| ||| |||||| ||||||||||||||    
T  40834231 aatgtatgtatttagtcaagaacctaaaccaaatacataaattatttaatgtatctaaaaa 40834171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 161 - 231
Target Start/End: Complemental strand, 8242318 - 8242248
Alignment:
Q  161 aatgtatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaattgtc 231  Q
    ||||||||||| ||||||||||||||||  ||||| ||| || ||| ||||||| ||||||||||||||||    
T  8242318 aatgtatgtatctagtcaagaacctaaatcaaatacataaatcatttaatgtatttaaaaagtaaattgtc 8242248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 173 - 231
Target Start/End: Original strand, 12270121 - 12270179
Alignment:
Q  173 tagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaattgtc 231  Q
    ||||||||||| ||||| ||||| ||| |||||| ||||||||||||||||||||||||    
T  12270121 tagtcaagaacttaaaccaaatacataaattatttaatgtatctaaaaagtaaattgtc 12270179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 161 - 231
Target Start/End: Original strand, 37564684 - 37564754
Alignment:
Q  161 aatgtatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaattgtc 231  Q
    |||||||| || |||| |||||||||||| ||||| ||| |||||| ||||||| ||||||||||||||||    
T  37564684 aatgtatgcatctagttaagaacctaaaccaaatacataaattatttaatgtatttaaaaagtaaattgtc 37564754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 161 - 231
Target Start/End: Complemental strand, 41915689 - 41915619
Alignment:
Q  161 aatgtatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaattgtc 231  Q
    ||||||||||| ||||||| || |||||| ||||| ||| |||||| |||||||||||||| |||||||||    
T  41915689 aatgtatgtatctagtcaataatctaaaccaaatacataaattatttaatgtatctaaaaattaaattgtc 41915619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 161 - 231
Target Start/End: Complemental strand, 42189898 - 42189828
Alignment:
Q  161 aatgtatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaattgtc 231  Q
    ||||||| ||| ||||||||||||||||| ||||| ||| |||||| ||| ||| ||||||||||||||||    
T  42189898 aatgtatatatctagtcaagaacctaaaccaaatacataaattatttaatatatttaaaaagtaaattgtc 42189828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 161 - 223
Target Start/End: Original strand, 43295116 - 43295178
Alignment:
Q  161 aatgtatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagt 223  Q
    ||||||||||| ||||||||||||||||| ||||| ||| |||||| ||||||| ||||||||    
T  43295116 aatgtatgtatctagtcaagaacctaaaccaaatacataaattatttaatgtatataaaaagt 43295178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 231
Target Start/End: Original strand, 3799769 - 3799840
Alignment:
Q  161 aatgtatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatct-aaaaagtaaattgtc 231  Q
    ||||||||||| |||||||||| |||||| ||||| ||| |||||| ||||||| | |||||||||||||||    
T  3799769 aatgtatgtatctagtcaagaatctaaaccaaatacataaattatttaatgtatttaaaaaagtaaattgtc 3799840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 228
Target Start/End: Complemental strand, 27793292 - 27793225
Alignment:
Q  161 aatgtatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaatt 228  Q
    ||||||| ||| | ||||||||||||||| ||||| ||| |||||| |||| ||||||||||||||||    
T  27793292 aatgtatatatctggtcaagaacctaaaccaaatacataaattatttaatgcatctaaaaagtaaatt 27793225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 161 - 231
Target Start/End: Original strand, 11293240 - 11293310
Alignment:
Q  161 aatgtatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaattgtc 231  Q
    ||||||||||| ||||||||||||||||| |  || ||| || ||| ||||||| ||||||||||||||||    
T  11293240 aatgtatgtatctagtcaagaacctaaaccatttacataaatgatttaatgtatttaaaaagtaaattgtc 11293310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 161 - 230
Target Start/End: Original strand, 25878225 - 25878293
Alignment:
Q  161 aatgtatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaattgt 230  Q
    ||||||||||| ||||||||||||||||  ||||| ||| |||||  ||||||||| |||||||||||||    
T  25878225 aatgtatgtatctagtcaagaacctaaatcaaatacataaattatataatgtatct-aaaagtaaattgt 25878293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 188 - 223
Target Start/End: Complemental strand, 12270124 - 12270089
Alignment:
Q  188 actaaatatatatattattcaatgtatctaaaaagt 223  Q
    |||||||||||||||||||| |||||||||||||||    
T  12270124 actaaatatatatattattcgatgtatctaaaaagt 12270089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 168 - 230
Target Start/End: Complemental strand, 29916616 - 29916553
Alignment:
Q  168 gtatatagtcaagaacctaaactaaatatatatattattcaatgtatcta-aaaagtaaattgt 230  Q
    |||| ||||||||||| ||||| ||||| ||| |||||| |||||||||| |||||||||||||    
T  29916616 gtatttagtcaagaacttaaaccaaatacataaattatttaatgtatctaaaaaagtaaattgt 29916553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 55; Significance: 9e-23; HSPs: 33)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 161 - 231
Target Start/End: Original strand, 37699833 - 37699903
Alignment:
Q  161 aatgtatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaattgtc 231  Q
    ||||||||||| ||||||||||||||||| ||||| ||| |||||||||||||||||||||||||||||||    
T  37699833 aatgtatgtatctagtcaagaacctaaaccaaatacataaattattcaatgtatctaaaaagtaaattgtc 37699903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 161 - 231
Target Start/End: Complemental strand, 1108378 - 1108308
Alignment:
Q  161 aatgtatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaattgtc 231  Q
    ||||||||||| ||||||||||||||||||||||| ||| ||||||  |||||||||||||||||||||||    
T  1108378 aatgtatgtatctagtcaagaacctaaactaaatacataaattattttatgtatctaaaaagtaaattgtc 1108308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 161 - 231
Target Start/End: Complemental strand, 13144975 - 13144905
Alignment:
Q  161 aatgtatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaattgtc 231  Q
    ||||||||||| ||||||||||||||||| ||||| ||| |||||| ||||||||||||||||||||||||    
T  13144975 aatgtatgtatctagtcaagaacctaaaccaaatacataaattatttaatgtatctaaaaagtaaattgtc 13144905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 161 - 231
Target Start/End: Complemental strand, 25027789 - 25027719
Alignment:
Q  161 aatgtatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaattgtc 231  Q
    ||||||| ||| ||||||||||||||||| ||||| ||| |||||||||||||||||||||||||||||||    
T  25027789 aatgtatatatctagtcaagaacctaaaccaaatacataaattattcaatgtatctaaaaagtaaattgtc 25027719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 161 - 231
Target Start/End: Complemental strand, 29374265 - 29374195
Alignment:
Q  161 aatgtatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaattgtc 231  Q
    ||||||||||| | ||||||||||||||| ||||| ||| |||||||||||||||||||||||||||||||    
T  29374265 aatgtatgtatctcgtcaagaacctaaaccaaatacataaattattcaatgtatctaaaaagtaaattgtc 29374195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 161 - 231
Target Start/End: Original strand, 36419038 - 36419108
Alignment:
Q  161 aatgtatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaattgtc 231  Q
    ||||||||||| ||||||||||||||||||||||| ||| ||||||  |||||||||||||||||||||||    
T  36419038 aatgtatgtatctagtcaagaacctaaactaaatacataaattattttatgtatctaaaaagtaaattgtc 36419108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 161 - 231
Target Start/End: Complemental strand, 41989659 - 41989589
Alignment:
Q  161 aatgtatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaattgtc 231  Q
    ||||||||||| ||||||||||||||||| ||||| ||| |||||| ||||||||||||||||||||||||    
T  41989659 aatgtatgtatctagtcaagaacctaaaccaaatacataaattatttaatgtatctaaaaagtaaattgtc 41989589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 161 - 230
Target Start/End: Complemental strand, 7945932 - 7945863
Alignment:
Q  161 aatgtatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaattgt 230  Q
    ||||||||||| |||||||||| |||||| ||||||||| |||||| |||||||||||||||||||||||    
T  7945932 aatgtatgtatctagtcaagaatctaaaccaaatatataaattatttaatgtatctaaaaagtaaattgt 7945863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 161 - 231
Target Start/End: Original strand, 6338368 - 6338438
Alignment:
Q  161 aatgtatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaattgtc 231  Q
    ||||||||||| || |||||||||||||| ||||| ||| |||||| ||||||||||||||||||||||||    
T  6338368 aatgtatgtatctaatcaagaacctaaaccaaatacataaattatttaatgtatctaaaaagtaaattgtc 6338438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 161 - 231
Target Start/End: Complemental strand, 26898286 - 26898216
Alignment:
Q  161 aatgtatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaattgtc 231  Q
    ||||||||||| ||||||||||||||||| ||||| ||| |||||| ||||||| ||||||||||||||||    
T  26898286 aatgtatgtatttagtcaagaacctaaaccaaatacataaattatttaatgtatttaaaaagtaaattgtc 26898216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 161 - 230
Target Start/End: Original strand, 904019 - 904088
Alignment:
Q  161 aatgtatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaattgt 230  Q
    ||||| ||||| ||||||||||||||||| ||||| ||| |||||| |||||||||||||||||||||||    
T  904019 aatgtgtgtatctagtcaagaacctaaaccaaatacataaattatttaatgtatctaaaaagtaaattgt 904088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 161 - 230
Target Start/End: Original strand, 18353261 - 18353330
Alignment:
Q  161 aatgtatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaattgt 230  Q
    ||||||||||| ||||||||||| ||||| ||||| ||| |||||| |||||||||||||||||||||||    
T  18353261 aatgtatgtatctagtcaagaacataaaccaaatacataaattatttaatgtatctaaaaagtaaattgt 18353330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 161 - 230
Target Start/End: Original strand, 36417100 - 36417169
Alignment:
Q  161 aatgtatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaattgt 230  Q
    ||||||||||| ||||||||||||||| | ||||| ||| |||||| |||||||||||||||||||||||    
T  36417100 aatgtatgtatctagtcaagaacctaatccaaatacataaattatttaatgtatctaaaaagtaaattgt 36417169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 161 - 231
Target Start/End: Complemental strand, 1643439 - 1643369
Alignment:
Q  161 aatgtatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaattgtc 231  Q
    ||||||||||| |||||||||| |||||  ||||| ||| ||| |||||||||||||||||||||||||||    
T  1643439 aatgtatgtatctagtcaagaatctaaatcaaatacataaatttttcaatgtatctaaaaagtaaattgtc 1643369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 161 - 231
Target Start/End: Complemental strand, 7053743 - 7053673
Alignment:
Q  161 aatgtatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaattgtc 231  Q
    ||||||||||| ||||||||| ||||||  ||||| ||| |||||| ||||||||||||||||||||||||    
T  7053743 aatgtatgtatctagtcaagagcctaaatcaaatacataaattatttaatgtatctaaaaagtaaattgtc 7053673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 161 - 231
Target Start/End: Complemental strand, 7750013 - 7749943
Alignment:
Q  161 aatgtatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaattgtc 231  Q
    ||||||||||| |||||||||| |||||| ||||| ||| |||||| |||||||||||||| |||||||||    
T  7750013 aatgtatgtatctagtcaagaatctaaaccaaatacataaattatttaatgtatctaaaaattaaattgtc 7749943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 161 - 231
Target Start/End: Original strand, 21090429 - 21090499
Alignment:
Q  161 aatgtatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaattgtc 231  Q
    ||||||||||| |||||||||| |||||| ||||| ||| |||||| ||||||| ||||||||||||||||    
T  21090429 aatgtatgtatctagtcaagaatctaaaccaaatacatacattatttaatgtatttaaaaagtaaattgtc 21090499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 165 - 230
Target Start/End: Complemental strand, 23411256 - 23411191
Alignment:
Q  165 tatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaattgt 230  Q
    ||||||| ||||||||||||||||| ||||| ||| |||||| |||||||||||||||||| ||||    
T  23411256 tatgtatctagtcaagaacctaaaccaaatacataaattatttaatgtatctaaaaagtaatttgt 23411191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 161 - 230
Target Start/End: Original strand, 31803011 - 31803080
Alignment:
Q  161 aatgtatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaattgt 230  Q
    ||||||| ||| ||||||| ||||||||| ||||| ||| |||||| |||||||||||||||||||||||    
T  31803011 aatgtatatatctagtcaataacctaaaccaaatacataaattatttaatgtatctaaaaagtaaattgt 31803080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 161 - 231
Target Start/End: Original strand, 9601646 - 9601716
Alignment:
Q  161 aatgtatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaattgtc 231  Q
    ||||||||||| ||||||| || |||||| ||||| ||| ||||||  |||||||||||||||||||||||    
T  9601646 aatgtatgtatctagtcaaaaatctaaaccaaatacataaattatttgatgtatctaaaaagtaaattgtc 9601716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 161 - 231
Target Start/End: Original strand, 15569384 - 15569454
Alignment:
Q  161 aatgtatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaattgtc 231  Q
    ||||||| ||| || |||||||| ||||| ||||| ||| |||||| ||||||||||||||||||||||||    
T  15569384 aatgtatatatctaatcaagaacataaaccaaatacataaattatttaatgtatctaaaaagtaaattgtc 15569454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 165 - 231
Target Start/End: Complemental strand, 41046919 - 41046853
Alignment:
Q  165 tatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaattgtc 231  Q
    ||||||| ||||||||||| ||||| ||||| ||| |||||| ||||||||||||||||| ||||||    
T  41046919 tatgtatctagtcaagaacttaaaccaaatacataaattatttaatgtatctaaaaagtagattgtc 41046853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 161 - 231
Target Start/End: Original strand, 42311863 - 42311933
Alignment:
Q  161 aatgtatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaattgtc 231  Q
    ||||||||||| ||||||| ||| ||||| ||||| ||| |||||| |||||||||||||| |||||||||    
T  42311863 aatgtatgtatttagtcaaaaacttaaaccaaatacataaattatttaatgtatctaaaaaataaattgtc 42311933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 161 - 230
Target Start/End: Original strand, 2959292 - 2959361
Alignment:
Q  161 aatgtatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaattgt 230  Q
    ||||||| ||| ||||||||||  ||||  ||||| |||||||||| |||||||||||||||||||||||    
T  2959292 aatgtatatatctagtcaagaatttaaatcaaatacatatattatttaatgtatctaaaaagtaaattgt 2959361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 161 - 230
Target Start/End: Original strand, 2967761 - 2967830
Alignment:
Q  161 aatgtatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaattgt 230  Q
    ||||||| ||| ||||||||||  ||||  ||||| |||||||||| |||||||||||||||||||||||    
T  2967761 aatgtatatatctagtcaagaatttaaatcaaatacatatattatttaatgtatctaaaaagtaaattgt 2967830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 161 - 230
Target Start/End: Original strand, 21610354 - 21610423
Alignment:
Q  161 aatgtatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaattgt 230  Q
    ||||||| ||| ||||||||||||||||| ||||| ||| |||||| ||||||| |||||||| ||||||    
T  21610354 aatgtatatatttagtcaagaacctaaaccaaatacataaattatttaatgtatataaaaagttaattgt 21610423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 161 - 230
Target Start/End: Complemental strand, 41815280 - 41815211
Alignment:
Q  161 aatgtatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaattgt 230  Q
    |||||| |||| ||||||||||||| ||| ||||| ||| |||||| ||||||| |||||||||||||||    
T  41815280 aatgtacgtatttagtcaagaacctgaaccaaatacataaattatttaatgtatttaaaaagtaaattgt 41815211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 161 - 221
Target Start/End: Complemental strand, 2825955 - 2825895
Alignment:
Q  161 aatgtatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaa 221  Q
    ||||||||||| |||| |||||||||||| ||||| ||| |||||| ||||||||||||||    
T  2825955 aatgtatgtatctagttaagaacctaaaccaaatacataaattatttaatgtatctaaaaa 2825895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 173 - 231
Target Start/End: Original strand, 20578720 - 20578778
Alignment:
Q  173 tagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaattgtc 231  Q
    ||||||| ||||||||| ||||| ||| |||||| ||||||| ||||||||||||||||    
T  20578720 tagtcaataacctaaaccaaatacataaattatttaatgtatataaaaagtaaattgtc 20578778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 161 - 230
Target Start/End: Complemental strand, 6910807 - 6910738
Alignment:
Q  161 aatgtatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaattgt 230  Q
    |||||||| || |||||||||| |||||  ||||| ||| |||||| |||||||||||||| ||||||||    
T  6910807 aatgtatgcatctagtcaagaatctaaatcaaatacataaattatttaatgtatctaaaaaataaattgt 6910738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 161 - 221
Target Start/End: Original strand, 16089140 - 16089200
Alignment:
Q  161 aatgtatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaa 221  Q
    ||||||||||| |||||| |||||||||| ||||| ||| |||||| ||| ||||||||||    
T  16089140 aatgtatgtatctagtcatgaacctaaaccaaatacataaattatttaatatatctaaaaa 16089200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 188 - 223
Target Start/End: Complemental strand, 21610369 - 21610334
Alignment:
Q  188 actaaatatatatattattcaatgtatctaaaaagt 223  Q
    |||||||||||| |||||||||||||||||||||||    
T  21610369 actaaatatatacattattcaatgtatctaaaaagt 21610334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 165 - 230
Target Start/End: Original strand, 38393812 - 38393877
Alignment:
Q  165 tatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaattgt 230  Q
    |||||||||||||||||| |||||  ||||  ||| |||||||||| ||| |||||||| ||||||    
T  38393812 tatgtatatagtcaagaatctaaatcaaattcataaattattcaatatatttaaaaagtcaattgt 38393877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 55; Significance: 9e-23; HSPs: 38)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 161 - 231
Target Start/End: Original strand, 49122573 - 49122643
Alignment:
Q  161 aatgtatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaattgtc 231  Q
    ||||||||||| |||| |||||||||||| ||||||||| |||||||||||||||||||||||||||||||    
T  49122573 aatgtatgtatctagttaagaacctaaaccaaatatataaattattcaatgtatctaaaaagtaaattgtc 49122643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 19 - 72
Target Start/End: Complemental strand, 23187117 - 23187064
Alignment:
Q  19 attgtggtatagctgtcatatgagaacaaatgagtgagttttgagcacttgtca 72  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23187117 attgtggtatagctgtcatatgagaacaaatgagtgagttttgagcacttgtca 23187064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 161 - 231
Target Start/End: Original strand, 18135366 - 18135436
Alignment:
Q  161 aatgtatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaattgtc 231  Q
    ||||||||||| ||||||||||||||||  ||||| ||| |||||||||||||||||||||||||||||||    
T  18135366 aatgtatgtatctagtcaagaacctaaatcaaatacataaattattcaatgtatctaaaaagtaaattgtc 18135436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 161 - 231
Target Start/End: Complemental strand, 23125741 - 23125671
Alignment:
Q  161 aatgtatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaattgtc 231  Q
    ||||||||||| ||||||||||||||||| ||||| ||| |||||| ||||||||||||||||||||||||    
T  23125741 aatgtatgtatttagtcaagaacctaaaccaaatacataaattatttaatgtatctaaaaagtaaattgtc 23125671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 161 - 231
Target Start/End: Complemental strand, 36099582 - 36099512
Alignment:
Q  161 aatgtatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaattgtc 231  Q
    ||||||||||| ||||||||||||||||| ||||| ||| |||||| ||||||||||||||||||||||||    
T  36099582 aatgtatgtatctagtcaagaacctaaaccaaatacataaattatttaatgtatctaaaaagtaaattgtc 36099512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 161 - 231
Target Start/End: Complemental strand, 47949034 - 47948964
Alignment:
Q  161 aatgtatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaattgtc 231  Q
    ||||||||||| ||||||||||||||||| ||||| ||| |||||| ||||||||||||||||||||||||    
T  47949034 aatgtatgtatttagtcaagaacctaaaccaaatacataaattatttaatgtatctaaaaagtaaattgtc 47948964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 161 - 230
Target Start/End: Original strand, 2411893 - 2411962
Alignment:
Q  161 aatgtatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaattgt 230  Q
    ||||||||||| |||||||||| |||||||||||| ||| |||||| |||||||||||||||||||||||    
T  2411893 aatgtatgtatctagtcaagaatctaaactaaatacataaattatttaatgtatctaaaaagtaaattgt 2411962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 161 - 230
Target Start/End: Complemental strand, 31227366 - 31227297
Alignment:
Q  161 aatgtatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaattgt 230  Q
    ||||||||||| ||||||||||||||||| ||||| ||| |||||| |||||||||||||||||||||||    
T  31227366 aatgtatgtatctagtcaagaacctaaaccaaatacataaattatttaatgtatctaaaaagtaaattgt 31227297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 161 - 228
Target Start/End: Complemental strand, 35329034 - 35328967
Alignment:
Q  161 aatgtatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaatt 228  Q
    ||||||||||| ||||||||||||||||| ||||| ||| |||||| |||||||||||||||||||||    
T  35329034 aatgtatgtatctagtcaagaacctaaaccaaatacataaattatttaatgtatctaaaaagtaaatt 35328967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 161 - 231
Target Start/End: Complemental strand, 2279619 - 2279549
Alignment:
Q  161 aatgtatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaattgtc 231  Q
    ||||||||||| |||||| |||||||||| ||||| ||| |||||| ||||||||||||||||||||||||    
T  2279619 aatgtatgtatctagtcatgaacctaaaccaaatacataaattatttaatgtatctaaaaagtaaattgtc 2279549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 161 - 231
Target Start/End: Original strand, 5970332 - 5970402
Alignment:
Q  161 aatgtatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaattgtc 231  Q
    ||||||||||| ||||||||||||||||| ||||| ||| |||||| ||||| ||||||||||||||||||    
T  5970332 aatgtatgtatctagtcaagaacctaaaccaaatacataaattatttaatgtgtctaaaaagtaaattgtc 5970402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 165 - 231
Target Start/End: Original strand, 7350263 - 7350329
Alignment:
Q  165 tatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaattgtc 231  Q
    ||||||| ||||||||||||||||| ||||| ||| |||||| ||||||||||||||||||||||||    
T  7350263 tatgtatctagtcaagaacctaaaccaaatacataaattatttaatgtatctaaaaagtaaattgtc 7350329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 161 - 231
Target Start/End: Original strand, 18430308 - 18430378
Alignment:
Q  161 aatgtatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaattgtc 231  Q
    ||||||||||| ||||||||||||||||  ||||| ||| |||||| ||||||||||||||||||||||||    
T  18430308 aatgtatgtatctagtcaagaacctaaatcaaatacataaattatttaatgtatctaaaaagtaaattgtc 18430378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 161 - 231
Target Start/End: Complemental strand, 39834369 - 39834299
Alignment:
Q  161 aatgtatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaattgtc 231  Q
    ||||||||||| || |||||||||||||| ||||||||| |||||| |||||||||||||| |||||||||    
T  39834369 aatgtatgtatctaatcaagaacctaaacaaaatatataaattatttaatgtatctaaaaaataaattgtc 39834299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 161 - 231
Target Start/End: Original strand, 53621381 - 53621451
Alignment:
Q  161 aatgtatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaattgtc 231  Q
    ||||||||||| || | |||||||||||| ||||| ||| |||||||||||||||||||||||||||||||    
T  53621381 aatgtatgtatctaatgaagaacctaaaccaaatacataaattattcaatgtatctaaaaagtaaattgtc 53621451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 161 - 230
Target Start/End: Original strand, 31854432 - 31854501
Alignment:
Q  161 aatgtatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaattgt 230  Q
    ||||||||||| ||||||| ||||||||| ||||| ||| |||||| |||||||||||||||||||||||    
T  31854432 aatgtatgtatctagtcaataacctaaaccaaatacataaattatttaatgtatctaaaaagtaaattgt 31854501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 161 - 230
Target Start/End: Original strand, 38687964 - 38688033
Alignment:
Q  161 aatgtatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaattgt 230  Q
    |||||| |||| ||||||||||||||||| ||||| ||| |||||| |||||||||||||||||||||||    
T  38687964 aatgtacgtatctagtcaagaacctaaaccaaatacataaattatttaatgtatctaaaaagtaaattgt 38688033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 161 - 231
Target Start/End: Original strand, 2385248 - 2385318
Alignment:
Q  161 aatgtatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaattgtc 231  Q
    ||||||||||| |||||||||| |||||| ||||| ||| |||||| |||||||||||||| |||||||||    
T  2385248 aatgtatgtatctagtcaagaatctaaacaaaatacataaattatttaatgtatctaaaaattaaattgtc 2385318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 161 - 231
Target Start/End: Original strand, 4758830 - 4758900
Alignment:
Q  161 aatgtatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaattgtc 231  Q
    ||||||||||| |||| |||||||||||  ||||| ||| |||||| ||||||||||||||||||||||||    
T  4758830 aatgtatgtatctagttaagaacctaaatcaaatacataaattatttaatgtatctaaaaagtaaattgtc 4758900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 165 - 231
Target Start/End: Complemental strand, 6246699 - 6246633
Alignment:
Q  165 tatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaattgtc 231  Q
    ||||||| | ||||||||||||||| ||||| ||| |||||| ||||||||||||||||||||||||    
T  6246699 tatgtatttggtcaagaacctaaaccaaatacataaattatttaatgtatctaaaaagtaaattgtc 6246633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 161 - 227
Target Start/End: Complemental strand, 39877498 - 39877432
Alignment:
Q  161 aatgtatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaat 227  Q
    ||||||||||| ||||||| ||||||||| ||||| ||| |||||| ||||||||||||||||||||    
T  39877498 aatgtatgtatctagtcaataacctaaaccaaatacataaattatttaatgtatctaaaaagtaaat 39877432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 161 - 230
Target Start/End: Complemental strand, 19485667 - 19485598
Alignment:
Q  161 aatgtatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaattgt 230  Q
    ||||||||||| || |||||||||||||| ||||| ||| |||||| ||||||| |||||||||||||||    
T  19485667 aatgtatgtatctaatcaagaacctaaaccaaatacataaattatttaatgtatttaaaaagtaaattgt 19485598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 165 - 230
Target Start/End: Complemental strand, 21221208 - 21221143
Alignment:
Q  165 tatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaattgt 230  Q
    ||||||| ||||||| ||||||||| ||||| ||| |||||| |||||||||||||||||||||||    
T  21221208 tatgtatctagtcaataacctaaaccaaatacataaattatttaatgtatctaaaaagtaaattgt 21221143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 161 - 217
Target Start/End: Complemental strand, 20688511 - 20688455
Alignment:
Q  161 aatgtatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatcta 217  Q
    ||||||||||| ||||||||||||||||| ||||| ||| |||||||||||||||||    
T  20688511 aatgtatgtatctagtcaagaacctaaaccaaatacataaattattcaatgtatcta 20688455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 161 - 231
Target Start/End: Original strand, 580464 - 580534
Alignment:
Q  161 aatgtatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaattgtc 231  Q
    |||||||||||  |||||| ||||||||| ||||| ||| |||||| |||||||||||||| |||||||||    
T  580464 aatgtatgtatccagtcaaaaacctaaaccaaatacataaattatttaatgtatctaaaaaataaattgtc 580534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 161 - 231
Target Start/End: Original strand, 3085925 - 3085995
Alignment:
Q  161 aatgtatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaattgtc 231  Q
    ||||||||||| ||||||| ||| ||||| ||||| ||| |||||| |||||||||||||| |||||||||    
T  3085925 aatgtatgtatttagtcaataacataaaccaaatacataaattatttaatgtatctaaaaaataaattgtc 3085995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 161 - 231
Target Start/End: Complemental strand, 51833107 - 51833037
Alignment:
Q  161 aatgtatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaattgtc 231  Q
    ||||||| ||| || |||||||||||||| ||||| ||| |||||| |||||||||||||| |||||||||    
T  51833107 aatgtatatatttattcaagaacctaaaccaaatacataaattatttaatgtatctaaaaaataaattgtc 51833037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 161 - 231
Target Start/End: Complemental strand, 53303831 - 53303761
Alignment:
Q  161 aatgtatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaattgtc 231  Q
    ||||||||||| |||||||||| |||||| ||||| ||| |||||| | |||||||||||| |||||||||    
T  53303831 aatgtatgtatttagtcaagaatctaaaccaaatacataaattatttagtgtatctaaaaaataaattgtc 53303761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 161 - 231
Target Start/End: Complemental strand, 56216329 - 56216259
Alignment:
Q  161 aatgtatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaattgtc 231  Q
    ||||||||||| |||| ||||| | |||| ||||| ||| |||||| ||||||||||||||||||||||||    
T  56216329 aatgtatgtatttagttaagaatccaaaccaaatacataaattatttaatgtatctaaaaagtaaattgtc 56216259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 176 - 230
Target Start/End: Original strand, 15170951 - 15171005
Alignment:
Q  176 tcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaattgt 230  Q
    |||||||| ||||  ||||| ||| ||||||||||||||||||||||||||||||    
T  15170951 tcaagaacataaatcaaatacataaattattcaatgtatctaaaaagtaaattgt 15171005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 161 - 219
Target Start/End: Complemental strand, 21229320 - 21229262
Alignment:
Q  161 aatgtatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaa 219  Q
    ||||||||||| ||||||||||||||||| ||||| ||| |||||| ||||||| ||||    
T  21229320 aatgtatgtatttagtcaagaacctaaaccaaatacataaattatttaatgtatttaaa 21229262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 161 - 231
Target Start/End: Original strand, 44200025 - 44200095
Alignment:
Q  161 aatgtatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaattgtc 231  Q
    ||||||| ||| |||||| ||| |||||| ||||| ||| |||||| | ||||||||||||||||||||||    
T  44200025 aatgtatatatctagtcaggaatctaaaccaaatacataaattatttagtgtatctaaaaagtaaattgtc 44200095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 161 - 230
Target Start/End: Original strand, 55292165 - 55292234
Alignment:
Q  161 aatgtatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaattgt 230  Q
    ||||||| ||| ||||| ||||||||||  ||||| ||| |||||| |||||||||||||| ||||||||    
T  55292165 aatgtatatatctagtcgagaacctaaatcaaatacataaattatttaatgtatctaaaaaataaattgt 55292234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 175 - 231
Target Start/End: Complemental strand, 27006586 - 27006530
Alignment:
Q  175 gtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaattgtc 231  Q
    |||||||| |||||  ||||| ||| |||||| ||||||||||||||||||||||||    
T  27006586 gtcaagaatctaaatcaaatacataaattatttaatgtatctaaaaagtaaattgtc 27006530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 165 - 230
Target Start/End: Complemental strand, 4698714 - 4698649
Alignment:
Q  165 tatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaattgt 230  Q
    ||||||||| ||| |||| |||||| | ||| ||| ||||||||||||||||||||| | ||||||    
T  4698714 tatgtatatggtctagaatctaaaccagatacataaattattcaatgtatctaaaaattcaattgt 4698649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 161 - 230
Target Start/End: Original strand, 52536004 - 52536073
Alignment:
Q  161 aatgtatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaattgt 230  Q
    ||||||||||| |||| || ||||||||  ||||| ||| |||||| ||||||| |||||||| ||||||    
T  52536004 aatgtatgtatctagttaaaaacctaaatcaaatacataaattatttaatgtatataaaaagttaattgt 52536073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 188 - 228
Target Start/End: Complemental strand, 29833333 - 29833293
Alignment:
Q  188 actaaatatatatattattcaatgtatctaaaaagtaaatt 228  Q
    |||||||| ||||||| ||||||||||||||||||| ||||    
T  29833333 actaaatacatatattcttcaatgtatctaaaaagtcaatt 29833293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 187 - 223
Target Start/End: Original strand, 56216313 - 56216349
Alignment:
Q  187 aactaaatatatatattattcaatgtatctaaaaagt 223  Q
    ||||||||| ||| |||||||||||||||||||||||    
T  56216313 aactaaatacatacattattcaatgtatctaaaaagt 56216349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 55; Significance: 9e-23; HSPs: 36)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 161 - 231
Target Start/End: Original strand, 6086954 - 6087024
Alignment:
Q  161 aatgtatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaattgtc 231  Q
    ||||||||||| ||||||||||||||||| ||||| ||| |||||||||||||||||||||||||||||||    
T  6086954 aatgtatgtatctagtcaagaacctaaaccaaatacataaattattcaatgtatctaaaaagtaaattgtc 6087024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 161 - 231
Target Start/End: Complemental strand, 10049763 - 10049693
Alignment:
Q  161 aatgtatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaattgtc 231  Q
    ||||||||||| ||||||||||||||||| ||||| ||| |||||||||||||||||||||||||||||||    
T  10049763 aatgtatgtatctagtcaagaacctaaaccaaatacataaattattcaatgtatctaaaaagtaaattgtc 10049693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 161 - 231
Target Start/End: Original strand, 8243735 - 8243805
Alignment:
Q  161 aatgtatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaattgtc 231  Q
    ||||||||||| |||||||||| |||||| ||||| ||| |||||||||||||||||||||||||||||||    
T  8243735 aatgtatgtatctagtcaagaatctaaaccaaatacataaattattcaatgtatctaaaaagtaaattgtc 8243805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 161 - 231
Target Start/End: Original strand, 9440181 - 9440251
Alignment:
Q  161 aatgtatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaattgtc 231  Q
    ||||||||||| ||||||||||| ||||| ||||| ||| |||||||||||||||||||||||||||||||    
T  9440181 aatgtatgtatctagtcaagaacttaaaccaaatacataaattattcaatgtatctaaaaagtaaattgtc 9440251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 161 - 231
Target Start/End: Complemental strand, 26999116 - 26999046
Alignment:
Q  161 aatgtatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaattgtc 231  Q
    ||||||||||| ||||||||||||||||| ||||| ||| |||||| ||||||||||||||||||||||||    
T  26999116 aatgtatgtatctagtcaagaacctaaaccaaatacataaattatttaatgtatctaaaaagtaaattgtc 26999046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 161 - 231
Target Start/End: Complemental strand, 47450011 - 47449941
Alignment:
Q  161 aatgtatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaattgtc 231  Q
    ||||||||||| ||||||||||||||||| ||||| ||| |||||| ||||||||||||||||||||||||    
T  47450011 aatgtatgtatctagtcaagaacctaaaccaaatacataaattatttaatgtatctaaaaagtaaattgtc 47449941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 161 - 230
Target Start/End: Original strand, 335428 - 335497
Alignment:
Q  161 aatgtatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaattgt 230  Q
    ||||||||||| ||||||||||||||||| ||||| ||| |||||| |||||||||||||||||||||||    
T  335428 aatgtatgtatctagtcaagaacctaaaccaaatacataaattatttaatgtatctaaaaagtaaattgt 335497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 165 - 231
Target Start/End: Complemental strand, 14768189 - 14768123
Alignment:
Q  165 tatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaattgtc 231  Q
    ||||||| ||||||||||||||||| ||||| ||| |||||| ||||||||||||||||||||||||    
T  14768189 tatgtatctagtcaagaacctaaaccaaatacataaattatttaatgtatctaaaaagtaaattgtc 14768123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 164 - 230
Target Start/End: Original strand, 19202306 - 19202372
Alignment:
Q  164 gtatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaattgt 230  Q
    |||||||| ||||||||||||||||| ||||| ||| |||||| |||||||||||||||||||||||    
T  19202306 gtatgtatctagtcaagaacctaaaccaaatacataaattatttaatgtatctaaaaagtaaattgt 19202372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 161 - 231
Target Start/End: Original strand, 25846564 - 25846634
Alignment:
Q  161 aatgtatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaattgtc 231  Q
    ||||||||||| ||||||||||||||||| ||||| ||| |||||| ||||||| ||||||||||||||||    
T  25846564 aatgtatgtatctagtcaagaacctaaaccaaatacataaattatttaatgtatttaaaaagtaaattgtc 25846634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 161 - 231
Target Start/End: Complemental strand, 40464617 - 40464547
Alignment:
Q  161 aatgtatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaattgtc 231  Q
    ||||||||||| ||||||||||||||||| ||||| ||| |||||| ||| ||||||||||||||||||||    
T  40464617 aatgtatgtatctagtcaagaacctaaaccaaatacataaattatttaatttatctaaaaagtaaattgtc 40464547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 161 - 231
Target Start/End: Original strand, 42605880 - 42605950
Alignment:
Q  161 aatgtatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaattgtc 231  Q
    ||||||||||| ||||||||||| ||||||||||| ||| ||||||  |||||||||||||||||||||||    
T  42605880 aatgtatgtatctagtcaagaacttaaactaaatacataaattattttatgtatctaaaaagtaaattgtc 42605950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 161 - 231
Target Start/End: Complemental strand, 49123039 - 49122969
Alignment:
Q  161 aatgtatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaattgtc 231  Q
    ||||||||||| ||||||||| ||||||| ||||| ||| |||||| ||||||||||||||||||||||||    
T  49123039 aatgtatgtatctagtcaagagcctaaaccaaatacataaattatttaatgtatctaaaaagtaaattgtc 49122969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 161 - 231
Target Start/End: Original strand, 52114077 - 52114147
Alignment:
Q  161 aatgtatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaattgtc 231  Q
    ||||||||||| |||| |||||||||||| ||||| ||| |||||| ||||||||||||||||||||||||    
T  52114077 aatgtatgtatctagtaaagaacctaaaccaaatacataaattatttaatgtatctaaaaagtaaattgtc 52114147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 161 - 226
Target Start/End: Complemental strand, 1122370 - 1122305
Alignment:
Q  161 aatgtatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaa 226  Q
    ||||||||||| |||||||||||||||| |||||| ||| |||||| |||||||||||||||||||    
T  1122370 aatgtatgtatctagtcaagaacctaaaataaatacataaattatttaatgtatctaaaaagtaaa 1122305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 161 - 230
Target Start/End: Original strand, 18765311 - 18765380
Alignment:
Q  161 aatgtatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaattgt 230  Q
    ||||||||||| ||||||||||||||||| ||||| ||| |||||| |||| ||||||||||||||||||    
T  18765311 aatgtatgtatttagtcaagaacctaaaccaaatacataaattatttaatgcatctaaaaagtaaattgt 18765380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 161 - 230
Target Start/End: Original strand, 42225615 - 42225684
Alignment:
Q  161 aatgtatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaattgt 230  Q
    ||||||||||| ||||||| ||||||||||||||| ||| |||||| |||||||| ||||||||||||||    
T  42225615 aatgtatgtatctagtcaataacctaaactaaatacataaattatttaatgtatcaaaaaagtaaattgt 42225684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 161 - 231
Target Start/End: Original strand, 9465124 - 9465194
Alignment:
Q  161 aatgtatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaattgtc 231  Q
    ||||||||||| ||||||||||||||||  ||||| ||| ||||||  |||||||||||||||||||||||    
T  9465124 aatgtatgtatctagtcaagaacctaaatcaaatacataaattattttatgtatctaaaaagtaaattgtc 9465194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 161 - 231
Target Start/End: Original strand, 21653397 - 21653467
Alignment:
Q  161 aatgtatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaattgtc 231  Q
    ||||||| ||| ||||||||||||||||| ||||  ||| |||||| ||||||||||||||||||||||||    
T  21653397 aatgtatatatctagtcaagaacctaaaccaaatgcataaattatttaatgtatctaaaaagtaaattgtc 21653467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 165 - 231
Target Start/End: Complemental strand, 22003887 - 22003821
Alignment:
Q  165 tatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaattgtc 231  Q
    ||||||| |||| ||||| |||||||||||||||| ||||||||||||||||||||| | |||||||    
T  22003887 tatgtatctagtaaagaatctaaactaaatatataaattattcaatgtatctaaaaaattaattgtc 22003821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 165 - 231
Target Start/End: Complemental strand, 22011404 - 22011338
Alignment:
Q  165 tatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaattgtc 231  Q
    ||||||| |||| ||||| |||||||||||||||| ||||||||||||||||||||| | |||||||    
T  22011404 tatgtatctagtaaagaatctaaactaaatatataaattattcaatgtatctaaaaaattaattgtc 22011338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 161 - 231
Target Start/End: Original strand, 25113402 - 25113472
Alignment:
Q  161 aatgtatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaattgtc 231  Q
    ||||||||||| || |||||||||||||| ||||| ||| |||||| |||||||| |||||||||||||||    
T  25113402 aatgtatgtatttaatcaagaacctaaaccaaatacataaattatttaatgtatcgaaaaagtaaattgtc 25113472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 161 - 231
Target Start/End: Complemental strand, 28945751 - 28945681
Alignment:
Q  161 aatgtatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaattgtc 231  Q
    ||||||||| | |||| |||||||||||| ||||| ||| |||||| ||||||||||||||||||||||||    
T  28945751 aatgtatgtttctagttaagaacctaaaccaaatacataaattatttaatgtatctaaaaagtaaattgtc 28945681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 165 - 231
Target Start/End: Complemental strand, 29019826 - 29019760
Alignment:
Q  165 tatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaattgtc 231  Q
    ||||||| ||||||||||||||||| ||||| ||| |||||| ||||||||||||| ||||||||||    
T  29019826 tatgtatctagtcaagaacctaaaccaaatacataaattatttaatgtatctaaaatgtaaattgtc 29019760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 161 - 230
Target Start/End: Complemental strand, 23825244 - 23825175
Alignment:
Q  161 aatgtatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaattgt 230  Q
    ||||||||||| |||||||||| |||||| ||||| ||| ||||||  ||||||||||||||||||||||    
T  23825244 aatgtatgtatctagtcaagaatctaaaccaaatacataaattatttgatgtatctaaaaagtaaattgt 23825175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 161 - 231
Target Start/End: Original strand, 28564988 - 28565058
Alignment:
Q  161 aatgtatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaattgtc 231  Q
    ||||||||||| |||||||||| |||||| ||||| ||| |||||| |||| ||||||||| |||||||||    
T  28564988 aatgtatgtatctagtcaagaatctaaaccaaatacataaattatttaatgcatctaaaaaataaattgtc 28565058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 164 - 230
Target Start/End: Original strand, 40141930 - 40141996
Alignment:
Q  164 gtatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaattgt 230  Q
    |||||||| ||||||||||  ||||| ||||| ||| |||||| |||||||||||||||||||||||    
T  40141930 gtatgtatttagtcaagaatttaaaccaaatacataaattatttaatgtatctaaaaagtaaattgt 40141996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 161 - 231
Target Start/End: Original strand, 40214953 - 40215023
Alignment:
Q  161 aatgtatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaattgtc 231  Q
    ||||||||||| |||||||||| |||||  ||||| ||| |||||| |||||||||||||||||| |||||    
T  40214953 aatgtatgtatctagtcaagaatctaaatcaaatacataaattatttaatgtatctaaaaagtaacttgtc 40215023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 161 - 231
Target Start/End: Original strand, 51698167 - 51698237
Alignment:
Q  161 aatgtatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaattgtc 231  Q
    ||||||||||| |||| | |||| ||||| ||||| ||| |||||| ||||||||||||||||||||||||    
T  51698167 aatgtatgtatctagtaatgaacataaaccaaatacataaattatttaatgtatctaaaaagtaaattgtc 51698237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 161 - 227
Target Start/End: Complemental strand, 9190123 - 9190057
Alignment:
Q  161 aatgtatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaat 227  Q
    ||||||||||| ||||||||||  ||||| ||||| ||| |||||| ||||||||| ||||||||||    
T  9190123 aatgtatgtatctagtcaagaatttaaaccaaatacataaattatttaatgtatcttaaaagtaaat 9190057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 165 - 225
Target Start/End: Complemental strand, 8825822 - 8825762
Alignment:
Q  165 tatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaa 225  Q
    ||||||| ||||||||||| ||||| ||||| ||| |||||| ||| ||||||||||||||    
T  8825822 tatgtatctagtcaagaacttaaaccaaatacataaattatttaatatatctaaaaagtaa 8825762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 162 - 227
Target Start/End: Original strand, 16660334 - 16660401
Alignment:
Q  162 atgtatgtatatagtcaagaacctaaactaaatatatatatt--attcaatgtatctaaaaagtaaat 227  Q
    |||||||||| ||||||| ||||||||| ||||| ||| |||  ||| ||||||||||||||||||||    
T  16660334 atgtatgtatttagtcaacaacctaaaccaaatacataaattttatttaatgtatctaaaaagtaaat 16660401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 161 - 225
Target Start/End: Original strand, 39341428 - 39341492
Alignment:
Q  161 aatgtatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaa 225  Q
    ||||||||||| |||||||||| |||||  ||||||||| |||||| ||| ||||||||| ||||    
T  39341428 aatgtatgtatctagtcaagaatctaaatcaaatatataaattatttaatatatctaaaatgtaa 39341492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 227
Target Start/End: Complemental strand, 13826207 - 13826141
Alignment:
Q  161 aatgtatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaat 227  Q
    ||||||||||| ||||||||||||||||  ||||  ||| |||||| ||||||  ||||||||||||    
T  13826207 aatgtatgtatttagtcaagaacctaaatcaaattcataaattatttaatgtaaataaaaagtaaat 13826141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 165 - 230
Target Start/End: Complemental strand, 55139264 - 55139199
Alignment:
Q  165 tatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaattgt 230  Q
    ||||||| | ||||||||  ||||  ||||| ||| ||||||||||||||||||||||| ||||||    
T  55139264 tatgtatttggtcaagaatttaaaacaaatacataaattattcaatgtatctaaaaagtcaattgt 55139199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 188 - 228
Target Start/End: Original strand, 29019815 - 29019855
Alignment:
Q  188 actaaatatatatattattcaatgtatctaaaaagtaaatt 228  Q
    |||| ||| ||||||||||||||||||||||||||| ||||    
T  29019815 actagatacatatattattcaatgtatctaaaaagtcaatt 29019855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 55; Significance: 9e-23; HSPs: 28)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 161 - 231
Target Start/End: Original strand, 16241320 - 16241390
Alignment:
Q  161 aatgtatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaattgtc 231  Q
    ||||||||||| ||||||||||||||||| ||||| ||| |||||||||||||||||||||||||||||||    
T  16241320 aatgtatgtatctagtcaagaacctaaaccaaatacataaattattcaatgtatctaaaaagtaaattgtc 16241390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 161 - 231
Target Start/End: Original strand, 25891997 - 25892067
Alignment:
Q  161 aatgtatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaattgtc 231  Q
    ||||||||||| ||||||||||||||||| ||||| ||| |||||||||||||||||||||||||||||||    
T  25891997 aatgtatgtatctagtcaagaacctaaaccaaatacataaattattcaatgtatctaaaaagtaaattgtc 25892067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 161 - 231
Target Start/End: Complemental strand, 6761560 - 6761490
Alignment:
Q  161 aatgtatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaattgtc 231  Q
    ||||||||||| ||||||||||| ||||| ||||| ||| |||||||||||||||||||||||||||||||    
T  6761560 aatgtatgtatctagtcaagaacataaaccaaatacataaattattcaatgtatctaaaaagtaaattgtc 6761490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 161 - 231
Target Start/End: Complemental strand, 18452664 - 18452594
Alignment:
Q  161 aatgtatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaattgtc 231  Q
    ||||||||||| ||||||||||| ||||| ||||| ||| |||||||||||||||||||||||||||||||    
T  18452664 aatgtatgtatctagtcaagaacttaaaccaaatacataaattattcaatgtatctaaaaagtaaattgtc 18452594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 161 - 231
Target Start/End: Complemental strand, 29866177 - 29866107
Alignment:
Q  161 aatgtatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaattgtc 231  Q
    ||||||||||| ||||||||||||||||| ||||| ||| |||||| ||||||||||||||||||||||||    
T  29866177 aatgtatgtatctagtcaagaacctaaaccaaatacataaattatttaatgtatctaaaaagtaaattgtc 29866107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 161 - 231
Target Start/End: Original strand, 40430719 - 40430789
Alignment:
Q  161 aatgtatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaattgtc 231  Q
    ||||||||||| ||||||||||||||||| ||||| ||| |||||| ||||||||||||||||||||||||    
T  40430719 aatgtatgtatctagtcaagaacctaaaccaaatacataaattatttaatgtatctaaaaagtaaattgtc 40430789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 161 - 230
Target Start/End: Original strand, 42263523 - 42263592
Alignment:
Q  161 aatgtatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaattgt 230  Q
    ||||||||||| ||||||||||||||||| ||||| ||| |||||| |||||||||||||||||||||||    
T  42263523 aatgtatgtatttagtcaagaacctaaaccaaatacataaattatttaatgtatctaaaaagtaaattgt 42263592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 161 - 231
Target Start/End: Original strand, 1944587 - 1944657
Alignment:
Q  161 aatgtatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaattgtc 231  Q
    ||||||||||| ||||||||||||||||| ||||  |||||||||| |||||||||||||||||| |||||    
T  1944587 aatgtatgtatctagtcaagaacctaaaccaaattcatatattatttaatgtatctaaaaagtaacttgtc 1944657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 161 - 231
Target Start/End: Original strand, 11363051 - 11363121
Alignment:
Q  161 aatgtatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaattgtc 231  Q
    ||||||| ||| ||||||||||||||||| ||||| ||| |||||| ||||||||||||||||||||||||    
T  11363051 aatgtatctatctagtcaagaacctaaaccaaatacataaattatttaatgtatctaaaaagtaaattgtc 11363121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 161 - 231
Target Start/End: Complemental strand, 41260120 - 41260050
Alignment:
Q  161 aatgtatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaattgtc 231  Q
    ||||||||||| ||||||||||||||||| ||||| ||| |||||| |||||||| |||||||||||||||    
T  41260120 aatgtatgtatctagtcaagaacctaaaccaaatacataaattatttaatgtatcaaaaaagtaaattgtc 41260050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 161 - 228
Target Start/End: Original strand, 43657978 - 43658045
Alignment:
Q  161 aatgtatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaatt 228  Q
    ||||||||||| ||||||| ||||||||| ||||| ||| |||||| |||||||||||||||||||||    
T  43657978 aatgtatgtatctagtcaaaaacctaaaccaaatacataaattatttaatgtatctaaaaagtaaatt 43658045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 161 - 231
Target Start/End: Original strand, 7765847 - 7765917
Alignment:
Q  161 aatgtatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaattgtc 231  Q
    ||||||||||| ||||||||||||||||  ||||| |||  ||||| ||||||||||||||||||||||||    
T  7765847 aatgtatgtatctagtcaagaacctaaatcaaatacataatttatttaatgtatctaaaaagtaaattgtc 7765917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 161 - 231
Target Start/End: Complemental strand, 20427096 - 20427026
Alignment:
Q  161 aatgtatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaattgtc 231  Q
    ||||||||||| ||||||||||||||||  ||||| ||| |||||| ||| ||||||||||||||||||||    
T  20427096 aatgtatgtatctagtcaagaacctaaatcaaatacataaattatttaatctatctaaaaagtaaattgtc 20427026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 165 - 231
Target Start/End: Original strand, 30864732 - 30864798
Alignment:
Q  165 tatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaattgtc 231  Q
    ||||||| ||||||||||| ||||| ||||| ||| |||||| ||||||||||||||||||||||||    
T  30864732 tatgtatctagtcaagaacttaaaccaaatacataaattatttaatgtatctaaaaagtaaattgtc 30864798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 165 - 231
Target Start/End: Complemental strand, 32880998 - 32880932
Alignment:
Q  165 tatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaattgtc 231  Q
    ||||||| ||||||||||||||||| ||||| ||| |||||| ||||||| ||||||||||||||||    
T  32880998 tatgtatctagtcaagaacctaaaccaaatacataaattatttaatgtatataaaaagtaaattgtc 32880932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 161 - 231
Target Start/End: Original strand, 45065633 - 45065703
Alignment:
Q  161 aatgtatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaattgtc 231  Q
    ||||||||||| ||||| |||| ||||| |||||| ||| |||||| ||||||||||||||||||||||||    
T  45065633 aatgtatgtatctagtctagaatctaaattaaatacataaattatttaatgtatctaaaaagtaaattgtc 45065703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 161 - 230
Target Start/End: Complemental strand, 32197471 - 32197402
Alignment:
Q  161 aatgtatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaattgt 230  Q
    ||||||||||| ||||||||||| ||||| ||||| ||| |||||| |||||||||||||| ||||||||    
T  32197471 aatgtatgtatctagtcaagaacataaaccaaatacataaattatttaatgtatctaaaaaataaattgt 32197402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 161 - 221
Target Start/End: Complemental strand, 2100112 - 2100052
Alignment:
Q  161 aatgtatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaa 221  Q
    ||||||||||| ||||||||||||||||| ||||| ||| |||||| ||||||||||||||    
T  2100112 aatgtatgtatctagtcaagaacctaaaccaaatacataaattatttaatgtatctaaaaa 2100052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 161 - 228
Target Start/End: Complemental strand, 13775806 - 13775739
Alignment:
Q  161 aatgtatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaatt 228  Q
    ||||||||||| ||||||| ||||||||| ||||| ||| |||||| ||| |||||||||||||||||    
T  13775806 aatgtatgtatctagtcaaaaacctaaaccaaatacataaattatttaatatatctaaaaagtaaatt 13775739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 161 - 231
Target Start/End: Original strand, 11711377 - 11711447
Alignment:
Q  161 aatgtatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaattgtc 231  Q
    ||||||||||| |||||||||||||||   ||||| ||| |||||| ||||||||| ||||||||||||||    
T  11711377 aatgtatgtatctagtcaagaacctaagtcaaatacataaattatttaatgtatcttaaaagtaaattgtc 11711447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 161 - 231
Target Start/End: Complemental strand, 42341713 - 42341643
Alignment:
Q  161 aatgtatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaattgtc 231  Q
    ||||||||||| || ||||||| |||||| ||||| ||| |||||| ||||||| ||||||||||||||||    
T  42341713 aatgtatgtatctaatcaagaatctaaaccaaatacataaattatttaatgtatttaaaaagtaaattgtc 42341643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 161 - 231
Target Start/End: Original strand, 44737336 - 44737405
Alignment:
Q  161 aatgtatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaattgtc 231  Q
    ||||||||||| |||| ||||| |||| | ||||| ||| |||||||||||||||||||||||||||||||    
T  44737336 aatgtatgtatctagttaagaatctaacc-aaatacataaattattcaatgtatctaaaaagtaaattgtc 44737405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 165 - 231
Target Start/End: Complemental strand, 38598547 - 38598481
Alignment:
Q  165 tatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaattgtc 231  Q
    ||||||| | ||||||||||||||| ||||| ||| |||||| ||| ||| ||||||||||||||||    
T  38598547 tatgtatctggtcaagaacctaaaccaaatacataaattatttaatatatataaaaagtaaattgtc 38598481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 161 - 231
Target Start/End: Complemental strand, 3265013 - 3264947
Alignment:
Q  161 aatgtatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaattgtc 231  Q
    ||||||||||| ||||||||||| ||||| ||||| ||    |||| ||||||||||||||||||||||||    
T  3265013 aatgtatgtatttagtcaagaacttaaaccaaataaat----tatttaatgtatctaaaaagtaaattgtc 3264947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 161 - 230
Target Start/End: Complemental strand, 4740805 - 4740736
Alignment:
Q  161 aatgtatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaattgt 230  Q
    ||||||||||| || ||||||||||| || ||||||||| |||||| ||| ||| |||||||| ||||||    
T  4740805 aatgtatgtatctaatcaagaacctataccaaatatataaattatttaatatatataaaaagttaattgt 4740736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 161 - 225
Target Start/End: Original strand, 32750395 - 32750459
Alignment:
Q  161 aatgtatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaa 225  Q
    ||||||||||| |||||||||| |||||  ||||| ||| |||||  ||||||||||||||||||    
T  32750395 aatgtatgtatctagtcaagaatctaaatcaaatacataaattatgtaatgtatctaaaaagtaa 32750459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 197 - 226
Target Start/End: Original strand, 38598545 - 38598574
Alignment:
Q  197 atatattattcaatgtatctaaaaagtaaa 226  Q
    ||||||||||||||||||||||||||||||    
T  38598545 atatattattcaatgtatctaaaaagtaaa 38598574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 221
Target Start/End: Complemental strand, 40255544 - 40255508
Alignment:
Q  185 taaactaaatatatatattattcaatgtatctaaaaa 221  Q
    ||||||||||||||| ||||||||||| |||||||||    
T  40255544 taaactaaatatataaattattcaatgaatctaaaaa 40255508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 55; Significance: 9e-23; HSPs: 28)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 161 - 231
Target Start/End: Complemental strand, 14281685 - 14281615
Alignment:
Q  161 aatgtatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaattgtc 231  Q
    ||||||||||| ||||||||||||||||| ||||| ||| |||||||||||||||||||||||||||||||    
T  14281685 aatgtatgtatctagtcaagaacctaaaccaaatacataaattattcaatgtatctaaaaagtaaattgtc 14281615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 162 - 231
Target Start/End: Original strand, 24594972 - 24595041
Alignment:
Q  162 atgtatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaattgtc 231  Q
    |||||||||| ||||||||||||||||| ||||||||| |||||| ||||||||||||||||||||||||    
T  24594972 atgtatgtatctagtcaagaacctaaaccaaatatataaattatttaatgtatctaaaaagtaaattgtc 24595041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 161 - 231
Target Start/End: Original strand, 9301972 - 9302042
Alignment:
Q  161 aatgtatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaattgtc 231  Q
    ||||||||||| ||||||||||||||||| ||||| ||| |||||| ||||||||||||||||||||||||    
T  9301972 aatgtatgtatctagtcaagaacctaaaccaaatacataaattatttaatgtatctaaaaagtaaattgtc 9302042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 161 - 231
Target Start/End: Complemental strand, 23398175 - 23398105
Alignment:
Q  161 aatgtatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaattgtc 231  Q
    ||||||||||| ||||||||||||||||| ||||| ||| ||||||||||||||||||||||||| |||||    
T  23398175 aatgtatgtatctagtcaagaacctaaaccaaatacataaattattcaatgtatctaaaaagtaagttgtc 23398105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 165 - 231
Target Start/End: Complemental strand, 38830574 - 38830508
Alignment:
Q  165 tatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaattgtc 231  Q
    ||||||| ||||||||||||||||| ||||| ||| |||||||||||||||||||||||||||||||    
T  38830574 tatgtatctagtcaagaacctaaaccaaatacataaattattcaatgtatctaaaaagtaaattgtc 38830508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 161 - 231
Target Start/End: Complemental strand, 2352404 - 2352334
Alignment:
Q  161 aatgtatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaattgtc 231  Q
    ||||||||||| ||||||||||||||||| ||||| ||| |||||| ||| ||||||||||||||||||||    
T  2352404 aatgtatgtatctagtcaagaacctaaaccaaatacataaattatttaatatatctaaaaagtaaattgtc 2352334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 161 - 231
Target Start/End: Original strand, 2961157 - 2961227
Alignment:
Q  161 aatgtatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaattgtc 231  Q
    ||||||||||| |||||| |||||||||| ||||| ||| |||||| ||||||||||||||||||||||||    
T  2961157 aatgtatgtatctagtcatgaacctaaaccaaatacataaattatttaatgtatctaaaaagtaaattgtc 2961227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 161 - 231
Target Start/End: Original strand, 10380443 - 10380513
Alignment:
Q  161 aatgtatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaattgtc 231  Q
    ||||||||||| |||||| |||||||||| ||||| ||| |||||| ||||||||||||||||||||||||    
T  10380443 aatgtatgtatctagtcatgaacctaaaccaaatacataaattatttaatgtatctaaaaagtaaattgtc 10380513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 165 - 231
Target Start/End: Original strand, 1674029 - 1674095
Alignment:
Q  165 tatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaattgtc 231  Q
    ||||||| ||||||||||||||||| ||||| ||| |||||| |||||||||||||| |||||||||    
T  1674029 tatgtatttagtcaagaacctaaaccaaatacataaattatttaatgtatctaaaaaataaattgtc 1674095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 161 - 231
Target Start/End: Original strand, 7796143 - 7796213
Alignment:
Q  161 aatgtatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaattgtc 231  Q
    ||||||||||| |||||||||| |||||| ||||| ||| |||||| |||||||||||||| |||||||||    
T  7796143 aatgtatgtatttagtcaagaatctaaaccaaatacataaattatttaatgtatctaaaaaataaattgtc 7796213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 161 - 231
Target Start/End: Complemental strand, 29312534 - 29312464
Alignment:
Q  161 aatgtatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaattgtc 231  Q
    |||||| |||| ||||||||||||||||  ||||| ||| |||||| ||||||||||||||||||||||||    
T  29312534 aatgtacgtatctagtcaagaacctaaatcaaatacataaattatttaatgtatctaaaaagtaaattgtc 29312464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 161 - 231
Target Start/End: Original strand, 40161226 - 40161296
Alignment:
Q  161 aatgtatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaattgtc 231  Q
    |||||||||||  |||||| ||||||||| ||||| ||| |||||| ||||||||||||||||||||||||    
T  40161226 aatgtatgtatccagtcaaaaacctaaaccaaatacataaattatttaatgtatctaaaaagtaaattgtc 40161296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 161 - 230
Target Start/End: Complemental strand, 6784754 - 6784685
Alignment:
Q  161 aatgtatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaattgt 230  Q
    ||||||||||| || |||||||||| ||  ||||||||| |||||| |||||||||||||||||||||||    
T  6784754 aatgtatgtatctaatcaagaacctgaatcaaatatataaattatttaatgtatctaaaaagtaaattgt 6784685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 161 - 230
Target Start/End: Original strand, 10065308 - 10065377
Alignment:
Q  161 aatgtatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaattgt 230  Q
    ||||||||||| | ||||||||||||||  ||||| ||| |||||| |||||||||||||||||||||||    
T  10065308 aatgtatgtatctcgtcaagaacctaaatcaaatacataaattatttaatgtatctaaaaagtaaattgt 10065377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 161 - 230
Target Start/End: Complemental strand, 26545092 - 26545023
Alignment:
Q  161 aatgtatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaattgt 230  Q
    ||||||||||| ||||||||||| ||||| ||||| ||| |||||| |||| ||||||||||||||||||    
T  26545092 aatgtatgtatctagtcaagaacttaaaccaaatacataaattatttaatgaatctaaaaagtaaattgt 26545023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 165 - 230
Target Start/End: Original strand, 28359128 - 28359193
Alignment:
Q  165 tatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaattgt 230  Q
    ||||||| |||||||||||| |||| ||||| ||| |||||| |||||||||||||||||||||||    
T  28359128 tatgtatctagtcaagaaccaaaaccaaatacataaattatttaatgtatctaaaaagtaaattgt 28359193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 161 - 230
Target Start/End: Complemental strand, 28989367 - 28989298
Alignment:
Q  161 aatgtatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaattgt 230  Q
    |||||| |||| |||||||||| |||||| ||||| ||| |||||| |||||||||||||||||||||||    
T  28989367 aatgtacgtatctagtcaagaatctaaaccaaatacataaattatttaatgtatctaaaaagtaaattgt 28989298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 165 - 225
Target Start/End: Original strand, 30264831 - 30264891
Alignment:
Q  165 tatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaa 225  Q
    ||||||| ||||||||||||||||| ||||||||| |||||| ||| ||||||||||||||    
T  30264831 tatgtatctagtcaagaacctaaaccaaatatataaattatttaatatatctaaaaagtaa 30264891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 161 - 231
Target Start/End: Complemental strand, 15289868 - 15289798
Alignment:
Q  161 aatgtatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaattgtc 231  Q
    ||||||||||  ||||||| ||||||||| ||||||||| |||||| ||||||||||||||  ||||||||    
T  15289868 aatgtatgtacctagtcaataacctaaaccaaatatataaattatttaatgtatctaaaaaagaaattgtc 15289798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 161 - 231
Target Start/End: Original strand, 26550340 - 26550410
Alignment:
Q  161 aatgtatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaattgtc 231  Q
    ||||||||||| |||| |||||||||||  ||||| ||| |||||| ||||| ||||||||||||||||||    
T  26550340 aatgtatgtatctagttaagaacctaaagcaaatacataaattatttaatgtttctaaaaagtaaattgtc 26550410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 161 - 230
Target Start/End: Complemental strand, 9548767 - 9548698
Alignment:
Q  161 aatgtatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaattgt 230  Q
    ||||| ||||| || |||||||||||||  ||||| ||| |||||| |||||||||||||||||||||||    
T  9548767 aatgtgtgtatctaatcaagaacctaaatcaaatacataaattatttaatgtatctaaaaagtaaattgt 9548698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 228
Target Start/End: Original strand, 45536216 - 45536283
Alignment:
Q  161 aatgtatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaatt 228  Q
    ||||||| |||  |||||||||||||||| ||||| ||| ||||||  ||||||||||||||||||||    
T  45536216 aatgtatttatcaagtcaagaacctaaaccaaatacataaattatttgatgtatctaaaaagtaaatt 45536283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 173 - 231
Target Start/End: Original strand, 23537386 - 23537444
Alignment:
Q  173 tagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaattgtc 231  Q
    ||||||||||||||||| ||||| ||| |||||| ||| |||||||||| |||||||||    
T  23537386 tagtcaagaacctaaaccaaatacataaattatttaatttatctaaaaaataaattgtc 23537444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 161 - 231
Target Start/End: Complemental strand, 33325428 - 33325358
Alignment:
Q  161 aatgtatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaattgtc 231  Q
    ||||||||||| ||||||| || |||||| | ||| ||| |||||| |||||||||||||| |||||||||    
T  33325428 aatgtatgtatctagtcaaaaatctaaaccagatacataaattatttaatgtatctaaaaaataaattgtc 33325358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 161 - 231
Target Start/End: Complemental strand, 34718986 - 34718916
Alignment:
Q  161 aatgtatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaattgtc 231  Q
    |||||| |||| ||||||| || |||||| ||||| ||| |||||| |||||||||||||| |||||||||    
T  34718986 aatgtacgtatctagtcaaaaatctaaaccaaatacataaattatttaatgtatctaaaaattaaattgtc 34718916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 165 - 230
Target Start/End: Complemental strand, 26733876 - 26733811
Alignment:
Q  165 tatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaattgt 230  Q
    ||||||| ||||||||||  ||||| ||||| ||| |||||| |||||||||||||||| ||||||    
T  26733876 tatgtatctagtcaagaatataaaccaaatacatagattatttaatgtatctaaaaagttaattgt 26733811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 231
Target Start/End: Complemental strand, 24463384 - 24463315
Alignment:
Q  161 aatgtatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaattgtc 231  Q
    ||||||||||| |  |||||||| ||||| ||||||||| |||||| ||| |||||||||| |||||||||    
T  24463384 aatgtatgtatttgatcaagaacataaaccaaatatataaattatttaatatatctaaaaa-taaattgtc 24463315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 69
Target Start/End: Complemental strand, 26925861 - 26925813
Alignment:
Q  21 tgtggtatagctgtcatatgagaacaaatgagtgagttttgagcacttg 69  Q
    |||| |||||||| || |||||||||| ||| |||||||||||||||||    
T  26925861 tgtgctatagctgccacatgagaacaattgattgagttttgagcacttg 26925813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0144 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0144
Description:

Target: scaffold0144; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 161 - 231
Target Start/End: Complemental strand, 38920 - 38850
Alignment:
Q  161 aatgtatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaattgtc 231  Q
    ||||||||||| ||||||||||||||||| ||||| ||| |||||| ||||||||||||||||||||||||    
T  38920 aatgtatgtatctagtcaagaacctaaaccaaatacataaattatttaatgtatctaaaaagtaaattgtc 38850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 51; Significance: 2e-20; HSPs: 21)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 161 - 231
Target Start/End: Complemental strand, 12763324 - 12763254
Alignment:
Q  161 aatgtatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaattgtc 231  Q
    ||||||||||| ||||||||||||||||| ||||| ||| |||||| ||||||||||||||||||||||||    
T  12763324 aatgtatgtatctagtcaagaacctaaaccaaatacataaattatttaatgtatctaaaaagtaaattgtc 12763254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 161 - 231
Target Start/End: Complemental strand, 30866340 - 30866270
Alignment:
Q  161 aatgtatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaattgtc 231  Q
    ||||||||||| ||||||||||||||||| ||||| ||| |||||| ||||||||||||||||||||||||    
T  30866340 aatgtatgtatctagtcaagaacctaaaccaaatacataaattatttaatgtatctaaaaagtaaattgtc 30866270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 161 - 231
Target Start/End: Original strand, 34281722 - 34281792
Alignment:
Q  161 aatgtatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaattgtc 231  Q
    ||||||||||| ||||||||||||||||| ||||| ||| |||||| ||||||||||||||||||||||||    
T  34281722 aatgtatgtatttagtcaagaacctaaaccaaatacataaattatttaatgtatctaaaaagtaaattgtc 34281792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 161 - 230
Target Start/End: Original strand, 19979547 - 19979616
Alignment:
Q  161 aatgtatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaattgt 230  Q
    ||||||||||| ||||||||||||||||| ||||| ||| |||||| |||||||||||||||||||||||    
T  19979547 aatgtatgtatttagtcaagaacctaaaccaaatacataaattatttaatgtatctaaaaagtaaattgt 19979616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 161 - 231
Target Start/End: Complemental strand, 3411427 - 3411357
Alignment:
Q  161 aatgtatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaattgtc 231  Q
    ||||||||||  ||||||||||||||||| ||||| ||| |||||| ||||||||||||||||||||||||    
T  3411427 aatgtatgtacctagtcaagaacctaaaccaaatacataaattatttaatgtatctaaaaagtaaattgtc 3411357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 161 - 231
Target Start/End: Original strand, 5909524 - 5909594
Alignment:
Q  161 aatgtatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaattgtc 231  Q
    ||||||| ||| ||||||||||||||||| ||||| ||| |||||| ||||||||||||||||||||||||    
T  5909524 aatgtatatatttagtcaagaacctaaaccaaatacataaattatttaatgtatctaaaaagtaaattgtc 5909594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 165 - 231
Target Start/End: Original strand, 23248725 - 23248791
Alignment:
Q  165 tatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaattgtc 231  Q
    ||||||| ||||||||||||||||| ||||| ||| |||||| ||||||||||||||||||||||||    
T  23248725 tatgtatttagtcaagaacctaaaccaaatacataaattatttaatgtatctaaaaagtaaattgtc 23248791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 161 - 231
Target Start/End: Complemental strand, 29770417 - 29770347
Alignment:
Q  161 aatgtatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaattgtc 231  Q
    |||| |||||| ||||||||||||||||| ||||| ||| |||||| ||||||||||||||||||||||||    
T  29770417 aatgcatgtatctagtcaagaacctaaaccaaatacataaattatttaatgtatctaaaaagtaaattgtc 29770347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 161 - 231
Target Start/End: Original strand, 35427712 - 35427782
Alignment:
Q  161 aatgtatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaattgtc 231  Q
    ||||||||||||||||||| ||| ||||| ||||| ||| |||||| ||||||||||||||||||||||||    
T  35427712 aatgtatgtatatagtcaaaaacataaaccaaatacataaattatttaatgtatctaaaaagtaaattgtc 35427782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 161 - 231
Target Start/End: Original strand, 5347776 - 5347845
Alignment:
Q  161 aatgtatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaattgtc 231  Q
    ||||||||||| ||||||||||||||||| ||||| ||| |||||| ||||||||| ||||||||||||||    
T  5347776 aatgtatgtatctagtcaagaacctaaaccaaatacataaattatttaatgtatct-aaaagtaaattgtc 5347845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 161 - 231
Target Start/End: Complemental strand, 20397910 - 20397840
Alignment:
Q  161 aatgtatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaattgtc 231  Q
    ||||||||||| |||||||||| |||||| ||||| ||| |||||| |||||||||||||| |||||||||    
T  20397910 aatgtatgtatctagtcaagaatctaaacaaaatacataaattatttaatgtatctaaaaattaaattgtc 20397840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 161 - 230
Target Start/End: Original strand, 46680882 - 46680951
Alignment:
Q  161 aatgtatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaattgt 230  Q
    ||||||| ||| ||||||||||| ||||  ||||||||| |||||| |||||||||||||||||||||||    
T  46680882 aatgtatatatctagtcaagaacttaaatcaaatatataaattatttaatgtatctaaaaagtaaattgt 46680951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 161 - 231
Target Start/End: Original strand, 12426583 - 12426653
Alignment:
Q  161 aatgtatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaattgtc 231  Q
    ||||||||||| |||||||||| |||||| |||||  || |||||| ||||||||||||||||||| ||||    
T  12426583 aatgtatgtatctagtcaagaatctaaaccaaatacgtaaattatttaatgtatctaaaaagtaaactgtc 12426653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 161 - 231
Target Start/End: Original strand, 32050133 - 32050203
Alignment:
Q  161 aatgtatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaattgtc 231  Q
    ||||||||||| || ||||||||||| || ||||| ||| |||||| ||| ||||||||||||||||||||    
T  32050133 aatgtatgtatctactcaagaacctacaccaaatacataaattatttaatatatctaaaaagtaaattgtc 32050203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 19 - 114
Target Start/End: Original strand, 9417473 - 9417570
Alignment:
Q  19 attgtggtatagctgtcatatgagaacaaatgagtgag-ttttgagcacttgtca---cctgagaaaaatatataacgcacaaggaaaaaatattgtgaa 114  Q
    ||||||||||||||| || |||||||||||| |||||| |||||| |||||||||   | ||||||||| || |||  || |||||||||||||||||||    
T  9417473 attgtggtatagctgccacatgagaacaaatcagtgagtttttgaacacttgtcatatcttgagaaaaaaatttaa--cagaaggaaaaaatattgtgaa 9417570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 161 - 231
Target Start/End: Original strand, 10599369 - 10599439
Alignment:
Q  161 aatgtatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaattgtc 231  Q
    ||||||||||| |||||||  |||||||| ||||| ||| ||||||  ||||||||||||| |||||||||    
T  10599369 aatgtatgtatctagtcaaacacctaaaccaaatacataaattattgtatgtatctaaaaaataaattgtc 10599439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 161 - 230
Target Start/End: Complemental strand, 7463544 - 7463475
Alignment:
Q  161 aatgtatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaattgt 230  Q
    ||||||||||| || ||||||| |||||| ||||| ||| |||||  ||||||| |||||||||||||||    
T  7463544 aatgtatgtatctaatcaagaatctaaaccaaatacataaattatgtaatgtatttaaaaagtaaattgt 7463475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 188 - 223
Target Start/End: Complemental strand, 23248736 - 23248701
Alignment:
Q  188 actaaatatatatattattcaatgtatctaaaaagt 223  Q
    |||||||| |||||||||||||||||||||||||||    
T  23248736 actaaatacatatattattcaatgtatctaaaaagt 23248701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 165 - 231
Target Start/End: Complemental strand, 7107721 - 7107655
Alignment:
Q  165 tatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaattgtc 231  Q
    ||||||| ||||||| || |||||| ||||| ||| |||||| |||||||||||||| | |||||||    
T  7107721 tatgtatctagtcaaaaatctaaaccaaatacataaattatttaatgtatctaaaaaattaattgtc 7107655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 231
Target Start/End: Original strand, 12085077 - 12085147
Alignment:
Q  161 aatgtatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaattgtc 231  Q
    |||||||||||  | |||||||||||||  ||||| ||| |||||| |||||||||||||| |||| ||||    
T  12085077 aatgtatgtattaaatcaagaacctaaatcaaatacataaattatttaatgtatctaaaaaataaactgtc 12085147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 161 - 214
Target Start/End: Complemental strand, 15074712 - 15074659
Alignment:
Q  161 aatgtatgtatatagtcaagaacctaaactaaatatatatattattcaatgtat 214  Q
    ||||||||||| ||||||||||| ||||| ||||| ||| |||||| |||||||    
T  15074712 aatgtatgtatctagtcaagaacttaaaccaaatacataaattatttaatgtat 15074659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2107 (Bit Score: 50; Significance: 9e-20; HSPs: 1)
Name: scaffold2107
Description:

Target: scaffold2107; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 161 - 230
Target Start/End: Complemental strand, 538 - 469
Alignment:
Q  161 aatgtatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaattgt 230  Q
    ||||||||||| ||||||||||||||||| ||||| ||| |||||| |||||||||||||||||||||||    
T  538 aatgtatgtatctagtcaagaacctaaacgaaatacataaattatttaatgtatctaaaaagtaaattgt 469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 50; Significance: 9e-20; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 161 - 230
Target Start/End: Complemental strand, 29339 - 29270
Alignment:
Q  161 aatgtatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaattgt 230  Q
    ||||||||||| ||||||||||||||||| ||||| ||| |||||| |||||||||||||||||||||||    
T  29339 aatgtatgtatctagtcaagaacctaaaccaaatacataaattatttaatgtatctaaaaagtaaattgt 29270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 50; Significance: 9e-20; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 161 - 230
Target Start/End: Original strand, 492358 - 492427
Alignment:
Q  161 aatgtatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaattgt 230  Q
    ||||||||||| ||||||||||||||||| ||||| ||| |||||| |||||||||||||||||||||||    
T  492358 aatgtatgtatttagtcaagaacctaaaccaaatacataaattatttaatgtatctaaaaagtaaattgt 492427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0592 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0592
Description:

Target: scaffold0592; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 161 - 228
Target Start/End: Complemental strand, 474 - 407
Alignment:
Q  161 aatgtatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaatt 228  Q
    ||||||||||| ||||||||||||||||| | ||||||| |||||| ||| |||||||||||||||||    
T  474 aatgtatgtatctagtcaagaacctaaaccatatatataaattatttaatatatctaaaaagtaaatt 407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 161 - 231
Target Start/End: Complemental strand, 36049 - 35979
Alignment:
Q  161 aatgtatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaattgtc 231  Q
    |||| |||||| |||| |||||||||||| ||||| ||| |||||| ||||||||||||||||||||||||    
T  36049 aatgcatgtatctagttaagaacctaaacaaaatacataaattatttaatgtatctaaaaagtaaattgtc 35979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0221 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 165 - 231
Target Start/End: Complemental strand, 11121 - 11055
Alignment:
Q  165 tatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaattgtc 231  Q
    ||||||| || |||||||| ||||| ||||| ||| |||||| ||||||||||||||||||||||||    
T  11121 tatgtatctaatcaagaacttaaaccaaatacataaattatttaatgtatctaaaaagtaaattgtc 11055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0246 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0246
Description:

Target: scaffold0246; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 173 - 230
Target Start/End: Complemental strand, 15238 - 15181
Alignment:
Q  173 tagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaattgt 230  Q
    ||||||||||||||||| ||||| ||| |||||| ||||||||||||||| |||||||    
T  15238 tagtcaagaacctaaaccaaatacataaattatttaatgtatctaaaaagcaaattgt 15181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 38; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 165 - 230
Target Start/End: Complemental strand, 5307 - 5242
Alignment:
Q  165 tatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaagtaaattgt 230  Q
    ||||||| ||||||||||||||||| ||||||||| |||||| ||| |||  ||||||||||||||    
T  5307 tatgtatttagtcaagaacctaaaccaaatatataaattatttaatatattaaaaaagtaaattgt 5242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 188 - 228
Target Start/End: Original strand, 5296 - 5336
Alignment:
Q  188 actaaatatatatattattcaatgtatctaaaaagtaaatt 228  Q
    |||||||| |||||||||||||| |||||||||||| ||||    
T  5296 actaaatacatatattattcaatttatctaaaaagttaatt 5336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 165 - 221
Target Start/End: Original strand, 77402 - 77458
Alignment:
Q  165 tatgtatatagtcaagaacctaaactaaatatatatattattcaatgtatctaaaaa 221  Q
    ||||||| |||||||||| |||||| ||||| ||| |||||| ||||||||||||||    
T  77402 tatgtatgtagtcaagaatctaaaccaaatacataaattatttaatgtatctaaaaa 77458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 161 - 231
Target Start/End: Original strand, 3684 - 3763
Alignment:
Q  161 aatgtatgtatatagtcaagaacctaaactaaata---------tatatattattcaatgtatctaaaaagtaaattgtc 231  Q
    ||||||||||| ||||||||||||||||| |||||         |||| |||||| ||||||||||||||||||||||||    
T  3684 aatgtatgtatttagtcaagaacctaaaccaaatacataaattatataaattatttaatgtatctaaaaagtaaattgtc 3763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University