View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11928_low_116 (Length: 215)
Name: NF11928_low_116
Description: NF11928
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11928_low_116 |
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Alignment Details
Target: chr2 (Bit Score: 175; Significance: 2e-94; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 175; E-Value: 2e-94
Query Start/End: Original strand, 19 - 201
Target Start/End: Original strand, 37397572 - 37397754
Alignment:
| Q |
19 |
cattatccatgagatattgcaaggcatgcaatgaaattgttgcttgctccaagatcaaacaaggctttggcaaacatgaccccgctgataataatcggta |
118 |
Q |
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| T |
37397572 |
cattatccatgagatattgcaaggcatgcaatgaaattgttgcttgctccaagatcaaacaaggctttggcaaacatgaccccgctgataacaatcggta |
37397671 |
T |
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| Q |
119 |
atgtaacccttcatggatccctacactttgatgattatcacggtatgcagtgtttccaaggtactctcgactgcttttcatct |
201 |
Q |
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|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37397672 |
atgtaacccttcatggatccctacacttcgatgattatcacggtatgcagtgtttccaaggtactctcgactgcttttcatct |
37397754 |
T |
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