View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11928_low_92 (Length: 253)

Name: NF11928_low_92
Description: NF11928
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11928_low_92
NF11928_low_92
[»] chr1 (26 HSPs)
chr1 (52-253)||(11999296-11999491)
chr1 (47-129)||(534127-534209)
chr1 (43-128)||(12368721-12368806)
chr1 (50-128)||(29232162-29232240)
chr1 (47-128)||(15053346-15053427)
chr1 (47-128)||(37987208-37987289)
chr1 (47-128)||(36248033-36248114)
chr1 (47-130)||(15054707-15054790)
chr1 (47-128)||(30981450-30981531)
chr1 (47-128)||(33709460-33709541)
chr1 (52-128)||(37985909-37985984)
chr1 (54-128)||(36249380-36249454)
chr1 (42-128)||(36368403-36368489)
chr1 (47-124)||(21795907-21795984)
chr1 (47-128)||(33708019-33708100)
chr1 (53-128)||(12898910-12898985)
chr1 (47-130)||(46595847-46595934)
chr1 (47-128)||(36362178-36362259)
chr1 (53-128)||(27552037-27552112)
chr1 (47-128)||(21794779-21794859)
chr1 (53-126)||(49767368-49767441)
chr1 (53-129)||(51338139-51338215)
chr1 (53-128)||(12251905-12251980)
chr1 (53-136)||(51340139-51340222)
chr1 (53-126)||(51839897-51839970)
chr1 (47-88)||(29231077-29231118)
[»] chr7 (26 HSPs)
chr7 (47-128)||(43084352-43084433)
chr7 (47-128)||(38198762-38198843)
chr7 (42-128)||(15131838-15131924)
chr7 (47-128)||(45957806-45957887)
chr7 (47-128)||(33625920-33626001)
chr7 (47-128)||(43831963-43832044)
chr7 (47-126)||(33624487-33624566)
chr7 (44-128)||(46044805-46044889)
chr7 (47-128)||(46043367-46043448)
chr7 (48-128)||(43083029-43083108)
chr7 (47-140)||(38200083-38200176)
chr7 (47-128)||(38875073-38875154)
chr7 (47-128)||(43308456-43308537)
chr7 (47-128)||(43309630-43309711)
chr7 (64-128)||(38873882-38873946)
chr7 (47-127)||(43830653-43830733)
chr7 (49-128)||(46331883-46331961)
chr7 (47-128)||(3495359-3495439)
chr7 (49-130)||(3496696-3496777)
chr7 (53-126)||(37107358-37107431)
chr7 (52-128)||(45959179-45959255)
chr7 (53-128)||(46330496-46330571)
chr7 (53-130)||(8082798-8082875)
chr7 (47-92)||(44168295-44168340)
chr7 (53-116)||(12622115-12622178)
chr7 (53-128)||(44166843-44166918)
[»] chr5 (21 HSPs)
chr5 (47-130)||(43439947-43440030)
chr5 (47-128)||(23318050-23318131)
chr5 (47-128)||(34527615-34527696)
chr5 (47-127)||(23312658-23312738)
chr5 (47-141)||(13921167-13921261)
chr5 (47-128)||(26866192-26866273)
chr5 (47-128)||(41140135-41140216)
chr5 (47-132)||(43441375-43441459)
chr5 (46-128)||(34526722-34526804)
chr5 (47-128)||(41138726-41138807)
chr5 (47-131)||(8218514-8218599)
chr5 (42-126)||(18951153-18951237)
chr5 (47-126)||(38691690-38691769)
chr5 (47-130)||(38693953-38694036)
chr5 (47-130)||(19116857-19116939)
chr5 (47-126)||(26864933-26865012)
chr5 (47-133)||(8217211-8217297)
chr5 (47-128)||(20898446-20898527)
chr5 (44-128)||(28381324-28381408)
chr5 (53-128)||(3407430-3407505)
chr5 (55-128)||(2263335-2263408)
[»] chr4 (27 HSPs)
chr4 (47-128)||(35054884-35054965)
chr4 (47-128)||(10322832-10322913)
chr4 (47-128)||(33688375-33688456)
chr4 (47-128)||(35061329-35061410)
chr4 (47-128)||(44208575-44208656)
chr4 (49-128)||(31470662-31470741)
chr4 (47-128)||(31318069-31318150)
chr4 (48-128)||(13086444-13086524)
chr4 (42-128)||(53568853-53568939)
chr4 (48-128)||(11669820-11669900)
chr4 (47-125)||(25423198-25423276)
chr4 (47-128)||(15562629-15562709)
chr4 (53-126)||(25244123-25244196)
chr4 (49-128)||(45046730-45046809)
chr4 (47-128)||(40171413-40171494)
chr4 (47-128)||(53572040-53572121)
chr4 (48-128)||(45045201-45045281)
chr4 (54-128)||(40170071-40170145)
chr4 (47-128)||(44209998-44210079)
chr4 (68-128)||(10321403-10321463)
chr4 (55-127)||(25421766-25421837)
chr4 (53-128)||(44451763-44451839)
chr4 (53-124)||(31316242-31316313)
chr4 (55-128)||(53570708-53570780)
chr4 (53-128)||(28162912-28162987)
chr4 (53-128)||(34513574-34513649)
chr4 (47-127)||(37329912-37329996)
[»] chr3 (31 HSPs)
chr3 (48-137)||(27867767-27867856)
chr3 (48-127)||(32148114-32148193)
chr3 (42-128)||(50614245-50614331)
chr3 (47-128)||(117947-118028)
chr3 (47-128)||(37180079-37180160)
chr3 (53-128)||(32146699-32146774)
chr3 (47-125)||(116626-116704)
chr3 (48-130)||(54185299-54185381)
chr3 (46-128)||(44558080-44558162)
chr3 (50-128)||(32944124-32944202)
chr3 (50-127)||(19831131-19831208)
chr3 (47-128)||(32942688-32942769)
chr3 (47-128)||(45234416-45234496)
chr3 (53-128)||(33476698-33476773)
chr3 (42-128)||(54185834-54185920)
chr3 (53-117)||(53439033-53439097)
chr3 (53-128)||(41926949-41927024)
chr3 (53-124)||(45235865-45235936)
chr3 (47-117)||(37178649-37178719)
chr3 (47-128)||(19825281-19825362)
chr3 (47-128)||(41786589-41786670)
chr3 (53-133)||(53244708-53244788)
chr3 (53-128)||(31992189-31992264)
chr3 (48-127)||(50615588-50615666)
chr3 (48-128)||(3670720-3670800)
chr3 (52-104)||(19669420-19669472)
chr3 (53-88)||(8576448-8576483)
chr3 (53-128)||(25233404-25233479)
chr3 (56-126)||(53246660-53246730)
chr3 (47-88)||(1430419-1430460)
chr3 (64-128)||(45387152-45387216)
[»] chr8 (32 HSPs)
chr8 (47-128)||(1692586-1692667)
chr8 (47-128)||(37705834-37705915)
chr8 (43-126)||(21136451-21136534)
chr8 (47-128)||(13322884-13322965)
chr8 (47-128)||(35370203-35370283)
chr8 (47-128)||(36062501-36062582)
chr8 (47-128)||(39338033-39338114)
chr8 (48-128)||(39336714-39336794)
chr8 (53-128)||(35368887-35368962)
chr8 (47-128)||(13324065-13324146)
chr8 (47-128)||(21135020-21135101)
chr8 (47-128)||(24451178-24451259)
chr8 (47-128)||(39308276-39308357)
chr8 (47-127)||(24452614-24452694)
chr8 (42-128)||(21575508-21575594)
chr8 (47-128)||(37707237-37707318)
chr8 (47-128)||(42816016-42816097)
chr8 (52-128)||(16472690-16472766)
chr8 (52-128)||(16477261-16477337)
chr8 (48-136)||(22959784-22959872)
chr8 (49-128)||(35864176-35864255)
chr8 (53-126)||(32243357-32243430)
chr8 (47-128)||(39310633-39310714)
chr8 (47-128)||(42817221-42817302)
chr8 (49-128)||(41280185-41280264)
chr8 (50-128)||(14835019-14835097)
chr8 (47-128)||(45021962-45022043)
chr8 (53-128)||(3865366-3865441)
chr8 (53-91)||(3866904-3866942)
chr8 (49-119)||(16478620-16478690)
chr8 (95-128)||(35862669-35862702)
chr8 (43-128)||(44893533-44893618)
[»] chr6 (14 HSPs)
chr6 (47-128)||(7852248-7852329)
chr6 (47-128)||(7855403-7855484)
chr6 (47-128)||(17246595-17246676)
chr6 (47-128)||(15119355-15119436)
chr6 (47-127)||(5080022-5080101)
chr6 (50-127)||(22972303-22972380)
chr6 (50-127)||(23816018-23816095)
chr6 (53-128)||(22971593-22971668)
chr6 (53-128)||(23816730-23816805)
chr6 (54-126)||(3335689-3335761)
chr6 (53-128)||(3912938-3913013)
chr6 (53-128)||(5086964-5087038)
chr6 (47-106)||(8230922-8230981)
chr6 (47-76)||(18503493-18503522)
[»] chr2 (24 HSPs)
chr2 (42-127)||(42488177-42488262)
chr2 (47-128)||(20721735-20721816)
chr2 (47-128)||(23787320-23787401)
chr2 (47-128)||(18673326-18673408)
chr2 (47-127)||(20721062-20721142)
chr2 (48-128)||(44494015-44494095)
chr2 (53-128)||(9112217-9112292)
chr2 (47-130)||(33001376-33001459)
chr2 (53-126)||(3104693-3104766)
chr2 (47-128)||(43931840-43931921)
chr2 (47-119)||(38276051-38276123)
chr2 (49-128)||(1373264-1373343)
chr2 (53-128)||(1373721-1373795)
chr2 (47-128)||(21438996-21439077)
chr2 (56-128)||(43933257-43933329)
chr2 (55-128)||(44492581-44492654)
chr2 (47-107)||(33000692-33000752)
chr2 (47-117)||(20719551-20719621)
chr2 (47-128)||(23788058-23788139)
chr2 (47-108)||(42486772-42486833)
chr2 (64-128)||(3105939-3106003)
chr2 (53-128)||(32317890-32317965)
chr2 (48-86)||(21440329-21440367)
chr2 (47-127)||(9190056-9190136)
[»] scaffold0093 (1 HSPs)
scaffold0093 (49-128)||(49272-49351)
[»] scaffold0097 (3 HSPs)
scaffold0097 (47-128)||(25564-25645)
scaffold0097 (47-117)||(23389-23459)
scaffold0097 (64-127)||(24907-24970)
[»] scaffold0385 (1 HSPs)
scaffold0385 (47-131)||(10464-10548)
[»] scaffold0651 (2 HSPs)
scaffold0651 (47-128)||(5520-5601)
scaffold0651 (53-124)||(7384-7455)
[»] scaffold0148 (2 HSPs)
scaffold0148 (47-123)||(38894-38970)
scaffold0148 (54-128)||(34673-34747)
[»] scaffold0003 (2 HSPs)
scaffold0003 (47-128)||(239207-239288)
scaffold0003 (47-87)||(240513-240553)
[»] scaffold0287 (1 HSPs)
scaffold0287 (49-130)||(237-318)
[»] scaffold0005 (1 HSPs)
scaffold0005 (53-133)||(282607-282687)


Alignment Details
Target: chr1 (Bit Score: 147; Significance: 1e-77; HSPs: 26)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 52 - 253
Target Start/End: Complemental strand, 11999491 - 11999296
Alignment:
Q  52 caaaaatttaataaaatttaaataggaactaatgttgaaaatacgcctatttatagagacctaaaacataattaaccttatatttatttagggagagtga 151  Q
    ||||| |||||||||||||||||||| ||||||||| |||| | | ||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  11999491 caaaattttaataaaatttaaatagggactaatgttaaaaacatgtctatttatagagacctaaaacataattaaccctatatttatttagggagagtga 11999392  T
Q  152 atgccatacaatcttactcttactcttagatggtgtttgaatattgtccctttagattacaaattcaaacagtcatcattgcgctagcgcccacatgatt 251  Q
    ||||||||||||||||||      |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11999391 atgccatacaatcttact------cttagatggtctttgaatattgtccctttagattacaaattcaaacagtcatcattgcgctagcgcccacatgatt 11999298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 47 - 129
Target Start/End: Original strand, 534127 - 534209
Alignment:
Q  47 gggaccaaaaatttaataaaatttaaataggaactaatgttgaaaatacgcctatttatagagacctaaaacataattaacct 129  Q
    |||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||    
T  534127 gggatcaaaaatttaataaaatttaaataggaactaatgttgaaaacacgcctatttattgagacctaaaacataattaacct 534209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 43 - 128
Target Start/End: Original strand, 12368721 - 12368806
Alignment:
Q  43 gttagggaccaaaaatttaataaaatttaaataggaactaatgttgaaaatacgcctatttatagagacctaaaacataattaacc 128  Q
    |||||||||||||||||||||||||||||| |||| |||||||||| |||  ||||||||||||| ||||||||||||||||||||    
T  12368721 gttagggaccaaaaatttaataaaatttaagtagggactaatgttggaaacgcgcctatttatagggacctaaaacataattaacc 12368806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 50 - 128
Target Start/End: Original strand, 29232162 - 29232240
Alignment:
Q  50 accaaaaatttaataaaatttaaataggaactaatgttgaaaatacgcctatttatagagacctaaaacataattaacc 128  Q
    ||||||||||||||||||||||| |||| | |||||||| |||||||||||||||||| ||||||||||||||||||||    
T  29232162 accaaaaatttaataaaatttaagtagggattaatgttggaaatacgcctatttatagggacctaaaacataattaacc 29232240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 47 - 128
Target Start/End: Complemental strand, 15053427 - 15053346
Alignment:
Q  47 gggaccaaaaatttaataaaatttaaataggaactaatgttgaaaatacgcctatttatagagacctaaaacataattaacc 128  Q
    ||||||||| |||||||||||||||| |||| ||||||||||||||  ||||||||||||| ||||||||||||||||||||    
T  15053427 gggaccaaatatttaataaaatttaagtagggactaatgttgaaaacgcgcctatttatagggacctaaaacataattaacc 15053346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 47 - 128
Target Start/End: Original strand, 37987208 - 37987289
Alignment:
Q  47 gggaccaaaaatttaataaaatttaaataggaactaatgttgaaaatacgcctatttatagagacctaaaacataattaacc 128  Q
    |||||||||||||||||||||||||| |||| |||||||||| |||  ||||||||||||| ||||||||||||||||||||    
T  37987208 gggaccaaaaatttaataaaatttaagtagggactaatgttggaaacgcgcctatttatagggacctaaaacataattaacc 37987289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 47 - 128
Target Start/End: Complemental strand, 36248114 - 36248033
Alignment:
Q  47 gggaccaaaaatttaataaaatttaaataggaactaatgttgaaaatacgcctatttatagagacctaaaacataattaacc 128  Q
    |||||||||||||||||||||||||| |||| |||||||||| |||  || |||||||||| ||||||||||||||||||||    
T  36248114 gggaccaaaaatttaataaaatttaagtagggactaatgttggaaacgcgtctatttatagggacctaaaacataattaacc 36248033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 47 - 130
Target Start/End: Original strand, 15054707 - 15054790
Alignment:
Q  47 gggaccaaaaatttaataaaatttaaataggaactaatgttgaaaatacgcctatttatagagacctaaaacataattaacctt 130  Q
    |||||||||||||||||||||||| | |||| |||||||||| ||| || ||||||||||| ||| ||||||||||||||||||    
T  15054707 gggaccaaaaatttaataaaattttagtaggtactaatgttggaaacacacctatttatagggacttaaaacataattaacctt 15054790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 47 - 128
Target Start/End: Complemental strand, 30981531 - 30981450
Alignment:
Q  47 gggaccaaaaatttaataaaatttaaataggaactaatgttgaaaatacgcctatttatagagacctaaaacataattaacc 128  Q
    |||||||||||||||||||||||||| |||| |||||||||| |||  ||||||| ||| | ||||||||||||||||||||    
T  30981531 gggaccaaaaatttaataaaatttaagtagggactaatgttggaaacgcgcctatatatcgggacctaaaacataattaacc 30981450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 47 - 128
Target Start/End: Original strand, 33709460 - 33709541
Alignment:
Q  47 gggaccaaaaatttaataaaatttaaataggaactaatgttgaaaatacgcctatttatagagacctaaaacataattaacc 128  Q
    |||| ||||||||||||||||||||| |||| |||||| ||  ||| |||||||||||||| ||||||||||||||||||||    
T  33709460 gggatcaaaaatttaataaaatttaagtagggactaatattagaaacacgcctatttatagggacctaaaacataattaacc 33709541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 52 - 128
Target Start/End: Complemental strand, 37985984 - 37985909
Alignment:
Q  52 caaaaatttaataaaatttaaataggaactaatgttgaaaatacgcctatttatagagacctaaaacataattaacc 128  Q
    |||||||||||||||||||||||||| |||||||||| ||| ||| ||||||||| ||| |||||||||||||||||    
T  37985984 caaaaatttaataaaatttaaatagggactaatgttgcaaacacgtctatttata-agatctaaaacataattaacc 37985909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 54 - 128
Target Start/End: Original strand, 36249380 - 36249454
Alignment:
Q  54 aaaatttaataaaatttaaataggaactaatgttgaaaatacgcctatttatagagacctaaaacataattaacc 128  Q
    ||||||||||||||||||| |||| ||||||||||||||  |||||||||||||  || ||||||||||||||||    
T  36249380 aaaatttaataaaatttaagtagggactaatgttgaaaacgcgcctatttataggaacttaaaacataattaacc 36249454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 42 - 128
Target Start/End: Original strand, 36368403 - 36368489
Alignment:
Q  42 tgttagggaccaaaaatttaataaaatttaaataggaactaatgttgaaaatacgcctatttatagagacctaaaacataattaacc 128  Q
    |||| |||| ||||||||||||||||||||| |||| ||||| |||| |||  ||||||||||||  ||||||||||||||||||||    
T  36368403 tgttggggatcaaaaatttaataaaatttaagtagggactaaggttggaaacgcgcctatttataaggacctaaaacataattaacc 36368489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 47 - 124
Target Start/End: Original strand, 21795907 - 21795984
Alignment:
Q  47 gggaccaaaaatttaataaaatttaaataggaactaatgttgaaaatacgcctatttatagagacctaaaacataatt 124  Q
    |||||||||||||||||||||||||| |||| ||| |||||| ||| ||| |||||||||| ||||| ||||||||||    
T  21795907 gggaccaaaaatttaataaaatttaagtagggactgatgttgtaaacacgtctatttatagggaccttaaacataatt 21795984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 47 - 128
Target Start/End: Complemental strand, 33708100 - 33708019
Alignment:
Q  47 gggaccaaaaatttaataaaatttaaataggaactaatgttgaaaatacgcctatttatagagacctaaaacataattaacc 128  Q
    |||||||||||||||||||||||||| || | |||||||||| |||   ||||||||||||  |||||||||||||||||||    
T  33708100 gggaccaaaaatttaataaaatttaagtatggactaatgttggaaacgtgcctatttataggaacctaaaacataattaacc 33708019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 53 - 128
Target Start/End: Original strand, 12898910 - 12898985
Alignment:
Q  53 aaaaatttaataaaatttaaataggaactaatgttgaaaatacgcctatttatagagacctaaaacataattaacc 128  Q
    |||||||||||||||||||||||||||| ||||||| ||   ||| ||||||||| ||||| ||||||||||||||    
T  12898910 aaaaatttaataaaatttaaataggaaccaatgttggaagctcgcttatttatagggaccttaaacataattaacc 12898985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 47 - 130
Target Start/End: Complemental strand, 46595934 - 46595847
Alignment:
Q  47 gggaccaaaaatttaataaaatttaaataggaactaatgttgaaaatacgcctatttatagagacc----taaaacataattaacctt 130  Q
    ||||| |||||||||||||||||||| |||| ||||| ||||||||  ||||||||||||| ||||    ||||||||||||||||||    
T  46595934 gggacaaaaaatttaataaaatttaagtagggactaacgttgaaaacgcgcctatttatagggacctaattaaaacataattaacctt 46595847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 47 - 128
Target Start/End: Complemental strand, 36362259 - 36362178
Alignment:
Q  47 gggaccaaaaatttaataaaatttaaataggaactaatgttgaaaatacgcctatttatagagacctaaaacataattaacc 128  Q
    ||||| |||||||||||||||||||||| || | |||||||| ||| | |||||||||||   |||||||||||||||||||    
T  36362259 gggactaaaaatttaataaaatttaaatggggattaatgttggaaacatgcctatttataagaacctaaaacataattaacc 36362178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 53 - 128
Target Start/End: Original strand, 27552037 - 27552112
Alignment:
Q  53 aaaaatttaataaaatttaaataggaactaatgttgaaaatacgcctatttatagagacctaaaacataattaacc 128  Q
    ||||||||||||||||||||||||| || |||||| |||   ||| ||||||||| ||||| ||||||||||||||    
T  27552037 aaaaatttaataaaatttaaatagggaccaatgttaaaagctcgcttatttatagggaccttaaacataattaacc 27552112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 47 - 128
Target Start/End: Complemental strand, 21794859 - 21794779
Alignment:
Q  47 gggaccaaaaatttaataaaatttaaataggaactaatgttgaaaatacgcctatttatagagacctaaaacataattaacc 128  Q
    |||||||||||||||||||||||||| ||||   |||||||| ||| ||| ||||||| || ||||| ||||||||||||||    
T  21794859 gggaccaaaaatttaataaaatttaagtaggggttaatgttggaaacacggctattta-agggaccttaaacataattaacc 21794779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 53 - 126
Target Start/End: Complemental strand, 49767441 - 49767368
Alignment:
Q  53 aaaaatttaataaaatttaaataggaactaatgttgaaaatacgcctatttatagagacctaaaacataattaa 126  Q
    |||||||||||||||||||||||||||| ||| || ||||| ||  |||||||||  |||| ||||||||||||    
T  49767441 aaaaatttaataaaatttaaataggaacgaatattaaaaattcgtttatttatagcaaccttaaacataattaa 49767368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 53 - 129
Target Start/End: Complemental strand, 51338215 - 51338139
Alignment:
Q  53 aaaaatttaataaaatttaaataggaactaatgttgaaaatacgcctatttatagagacctaaaacataattaacct 129  Q
    |||||||||||||||||||||||||||| ||||||| |||  ||| ||||| ||| || || ||| |||||||||||    
T  51338215 aaaaatttaataaaatttaaataggaaccaatgttggaaactcgcttatttgtagggatcttaaatataattaacct 51338139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 53 - 128
Target Start/End: Original strand, 12251905 - 12251980
Alignment:
Q  53 aaaaatttaataaaatttaaataggaactaatgttgaaaatacgcctatttatagagacctaaaacataattaacc 128  Q
    ||||||||||||||||||||||||| || ||||||| ||   ||| ||||||||| ||| | ||||||||||||||    
T  12251905 aaaaatttaataaaatttaaatagggaccaatgttggaagctcgcttatttatagggactttaaacataattaacc 12251980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 53 - 136
Target Start/End: Original strand, 51340139 - 51340222
Alignment:
Q  53 aaaaatttaataaaatttaaataggaactaatgttgaaaatacgcctatttatagagacctaaaacataattaaccttatattt 136  Q
    ||||||||||||||||||||||||| || |||| ||||||  ||| ||| | ||  ||||| |||||||||||||||| |||||    
T  51340139 aaaaatttaataaaatttaaatagggaccaatgctgaaaactcgcttatatgtaaggaccttaaacataattaaccttttattt 51340222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 53 - 126
Target Start/End: Complemental strand, 51839970 - 51839897
Alignment:
Q  53 aaaaatttaataaaatttaaataggaactaatgttgaaaatacgcctatttatagagacctaaaacataattaa 126  Q
    ||||||||||||||||||||||||| || ||||||| ||   ||| ||||||||| ||| | ||||||||||||    
T  51839970 aaaaatttaataaaatttaaatagggaccaatgttggaagctcgcttatttatagggactttaaacataattaa 51839897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 47 - 88
Target Start/End: Complemental strand, 29231118 - 29231077
Alignment:
Q  47 gggaccaaaaatttaataaaatttaaataggaactaatgttg 88  Q
    |||||||||||||||||||||||||| || | ||||||||||    
T  29231118 gggaccaaaaatttaataaaatttaagtaaggactaatgttg 29231077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 70; Significance: 1e-31; HSPs: 26)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 47 - 128
Target Start/End: Original strand, 43084352 - 43084433
Alignment:
Q  47 gggaccaaaaatttaataaaatttaaataggaactaatgttgaaaatacgcctatttatagagacctaaaacataattaacc 128  Q
    |||||||||||||||||||||||||| ||||||||||||||| ||| |||||||||||||||||||||||||||||||||||    
T  43084352 gggaccaaaaatttaataaaatttaagtaggaactaatgttggaaacacgcctatttatagagacctaaaacataattaacc 43084433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 47 - 128
Target Start/End: Complemental strand, 38198843 - 38198762
Alignment:
Q  47 gggaccaaaaatttaataaaatttaaataggaactaatgttgaaaatacgcctatttatagagacctaaaacataattaacc 128  Q
    ||||||||||||||||||||||||||||||| |||||||||| ||| |||||||||||||| ||||||||||||||||||||    
T  38198843 gggaccaaaaatttaataaaatttaaatagggactaatgttggaaacacgcctatttatagggacctaaaacataattaacc 38198762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 42 - 128
Target Start/End: Original strand, 15131838 - 15131924
Alignment:
Q  42 tgttagggaccaaaaatttaataaaatttaaataggaactaatgttgaaaatacgcctatttatagagacctaaaacataattaacc 128  Q
    |||| |||||||||||||||||||||||||| ||||||||||||||||||| ||||| |||||||  ||||||||||||||||||||    
T  15131838 tgttggggaccaaaaatttaataaaatttaagtaggaactaatgttgaaaacacgccgatttataaggacctaaaacataattaacc 15131924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 47 - 128
Target Start/End: Complemental strand, 45957887 - 45957806
Alignment:
Q  47 gggaccaaaaatttaataaaatttaaataggaactaatgttgaaaatacgcctatttatagagacctaaaacataattaacc 128  Q
    |||||||||||||||||||||||||| ||||  ||||||||||||| |||||||||||||| ||||||||||||||||||||    
T  45957887 gggaccaaaaatttaataaaatttaagtaggggctaatgttgaaaacacgcctatttatagggacctaaaacataattaacc 45957806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 47 - 128
Target Start/End: Original strand, 33625920 - 33626001
Alignment:
Q  47 gggaccaaaaatttaataaaatttaaataggaactaatgttgaaaatacgcctatttatagagacctaaaacataattaacc 128  Q
    |||||||||||||||||||||||||| |||||||||||| || ||| ||| |||||||||| ||||||||||||||||||||    
T  33625920 gggaccaaaaatttaataaaatttaagtaggaactaatgatggaaacacgtctatttatagggacctaaaacataattaacc 33626001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 47 - 128
Target Start/End: Original strand, 43831963 - 43832044
Alignment:
Q  47 gggaccaaaaatttaataaaatttaaataggaactaatgttgaaaatacgcctatttatagagacctaaaacataattaacc 128  Q
    ||||| |||||||||||||||||||| |||| ||||||||||||||  ||||||||||||||||||| ||||||||||||||    
T  43831963 gggacaaaaaatttaataaaatttaagtagggactaatgttgaaaacgcgcctatttatagagaccttaaacataattaacc 43832044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 47 - 126
Target Start/End: Complemental strand, 33624566 - 33624487
Alignment:
Q  47 gggaccaaaaatttaataaaatttaaataggaactaatgttgaaaatacgcctatttatagagacctaaaacataattaa 126  Q
    |||| ||||||||||||||||||||| |||||||||||||| ||||  ||||||||||||| ||||||||||||||||||    
T  33624566 gggatcaaaaatttaataaaatttaagtaggaactaatgttaaaaacgcgcctatttatagggacctaaaacataattaa 33624487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 44 - 128
Target Start/End: Original strand, 46044805 - 46044889
Alignment:
Q  44 ttagggaccaaaaatttaataaaatttaaataggaactaatgttgaaaatacgcctatttatagagacctaaaacataattaacc 128  Q
    ||||||| ||||||||||||||||||||| |||| |||||||||||||| |||| ||||||||   |||||||||||||||||||    
T  46044805 ttagggatcaaaaatttaataaaatttaagtagggactaatgttgaaaacacgcttatttataagaacctaaaacataattaacc 46044889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 47 - 128
Target Start/End: Complemental strand, 46043448 - 46043367
Alignment:
Q  47 gggaccaaaaatttaataaaatttaaataggaactaatgttgaaaatacgcctatttatagagacctaaaacataattaacc 128  Q
    |||||||||||||||||||||||||| |||| |||||||||| |||  ||| |||||||||  |||||||||||||||||||    
T  46043448 gggaccaaaaatttaataaaatttaagtagggactaatgttggaaacgcgcatatttataggaacctaaaacataattaacc 46043367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 48 - 128
Target Start/End: Complemental strand, 43083108 - 43083029
Alignment:
Q  48 ggaccaaaaatttaataaaatttaaataggaactaatgttgaaaatacgcctatttatagagacctaaaacataattaacc 128  Q
    ||||||||||||||||||||||||| |||  ||||||||| |||| ||| |||||||||| ||||||||||||||||||||    
T  43083108 ggaccaaaaatttaataaaatttaagtagagactaatgttaaaaacacgtctatttatag-gacctaaaacataattaacc 43083029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 47 - 140
Target Start/End: Original strand, 38200083 - 38200176
Alignment:
Q  47 gggaccaaaaatttaataaaatttaaataggaactaatgttgaaaatacgcctatttatagagacctaaaacataattaaccttatatttattt 140  Q
    |||||||||||||||||||||||||| ||   |||||||||||||||  ||| |||||||  ||| |||||||||||||||| | |||||||||    
T  38200083 gggaccaaaaatttaataaaatttaagtaatgactaatgttgaaaatgagcccatttataaggacttaaaacataattaaccctttatttattt 38200176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 47 - 128
Target Start/End: Original strand, 38875073 - 38875154
Alignment:
Q  47 gggaccaaaaatttaataaaatttaaataggaactaatgttgaaaatacgcctatttatagagacctaaaacataattaacc 128  Q
    |||||||||||||||||||||||||| |||  |||||||||| ||  |||| ||||||||| ||||| ||||||||||||||    
T  38875073 gggaccaaaaatttaataaaatttaagtagagactaatgttggaagcacgcttatttatagggaccttaaacataattaacc 38875154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 47 - 128
Target Start/End: Complemental strand, 43308537 - 43308456
Alignment:
Q  47 gggaccaaaaatttaataaaatttaaataggaactaatgttgaaaatacgcctatttatagagacctaaaacataattaacc 128  Q
    |||||||||||||||||||||||||| | || ||| |||||||||| ||| |||||||||  ||||| ||||||||||||||    
T  43308537 gggaccaaaaatttaataaaatttaagttgggactgatgttgaaaacacgtctatttataaggaccttaaacataattaacc 43308456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 47 - 128
Target Start/End: Original strand, 43309630 - 43309711
Alignment:
Q  47 gggaccaaaaatttaataaaatttaaataggaactaatgttgaaaatacgcctatttatagagacctaaaacataattaacc 128  Q
    |||| ||||||||||||||||||||| |||  | |||||||||||| |||||||||||||| ||||| |||||| |||||||    
T  43309630 gggatcaaaaatttaataaaatttaagtagagattaatgttgaaaacacgcctatttatagggaccttaaacatgattaacc 43309711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 64 - 128
Target Start/End: Complemental strand, 38873946 - 38873882
Alignment:
Q  64 aaaatttaaataggaactaatgttgaaaatacgcctatttatagagacctaaaacataattaacc 128  Q
    ||||||||| |||| ||||||||||||||| ||||||||||||| ||||| ||||||||||||||    
T  38873946 aaaatttaagtagggactaatgttgaaaatgcgcctatttatagggaccttaaacataattaacc 38873882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 47 - 127
Target Start/End: Complemental strand, 43830733 - 43830653
Alignment:
Q  47 gggaccaaaaatttaataaaatttaaataggaactaatgttgaaaatacgcctatttatagagacctaaaacataattaac 127  Q
    |||| ||||||||||||||||||||| |||| ||||||||||||||  | ||||||||||| | ||| |||||||||||||    
T  43830733 gggatcaaaaatttaataaaatttaagtagggactaatgttgaaaacgcacctatttataggggccttaaacataattaac 43830653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 49 - 128
Target Start/End: Original strand, 46331883 - 46331961
Alignment:
Q  49 gaccaaaaatttaataaaatttaaataggaactaatgttgaaaatacgcctatttatagagacctaaaacataattaacc 128  Q
    |||||||||||||||||||||||| |||| |||||||||| |||  |||||||||| || ||||||||| ||||||||||    
T  46331883 gaccaaaaatttaataaaatttaagtagggactaatgttggaaacgcgcctatttacag-gacctaaaatataattaacc 46331961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 47 - 128
Target Start/End: Complemental strand, 3495439 - 3495359
Alignment:
Q  47 gggaccaaaaatttaataaaatttaaataggaactaatgttgaaaatacgcctatttatagagacctaaaacataattaacc 128  Q
    |||||||||||||||||||||||||| |||| ||||||||| ||||  || |||||||||   |||||||||||||||||||    
T  3495439 gggaccaaaaatttaataaaatttaagtagggactaatgtt-aaaacgcgtctatttataagcacctaaaacataattaacc 3495359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 49 - 130
Target Start/End: Original strand, 3496696 - 3496777
Alignment:
Q  49 gaccaaaaatttaataaaatttaaataggaactaatgttgaaaatacgcctatttatagagacctaaaacataattaacctt 130  Q
    |||||||||| ||||||||||||| |||   |||||||||||||  ||||||||||| |  |||||||||||||||||||||    
T  3496696 gaccaaaaatataataaaatttaagtagaggctaatgttgaaaacgcgcctatttattggaacctaaaacataattaacctt 3496777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 53 - 126
Target Start/End: Complemental strand, 37107431 - 37107358
Alignment:
Q  53 aaaaatttaataaaatttaaataggaactaatgttgaaaatacgcctatttatagagacctaaaacataattaa 126  Q
    ||||||||||||||||||||||||| || |||||| ||||  ||| ||||||||| ||||| ||||||||||||    
T  37107431 aaaaatttaataaaatttaaatagggaccaatgttaaaaactcgcttatttatagggaccttaaacataattaa 37107358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 52 - 128
Target Start/End: Original strand, 45959179 - 45959255
Alignment:
Q  52 caaaaatttaataaaatttaaataggaactaatgttgaaaatacgcctatttatagagacctaaaacataattaacc 128  Q
    ||||| ||||||||||||||| |||  |||||||||| |||    ||||||||||||||||||||||||||||||||    
T  45959179 caaaattttaataaaatttaagtagagactaatgttggaaacgaacctatttatagagacctaaaacataattaacc 45959255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 53 - 128
Target Start/End: Complemental strand, 46330571 - 46330496
Alignment:
Q  53 aaaaatttaataaaatttaaataggaactaatgttgaaaatacgcctatttatagagacctaaaacataattaacc 128  Q
    |||||||||||||||||||| |||| |||||||||| ||| ||||||||| |||  || ||||| |||||||||||    
T  46330571 aaaaatttaataaaatttaagtagggactaatgttggaaacacgcctattcatatggaactaaatcataattaacc 46330496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 53 - 130
Target Start/End: Original strand, 8082798 - 8082875
Alignment:
Q  53 aaaaatttaataaaatttaaataggaactaatgttgaaaatacgcctatttatagagacctaaaacataattaacctt 130  Q
    |||||||||||||||||| |||||| || ||||||||||   ||| ||||| ||| || || ||||||||||||||||    
T  8082798 aaaaatttaataaaattttaatagggaccaatgttgaaagctcgcttatttgtagggatcttaaacataattaacctt 8082875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 47 - 92
Target Start/End: Original strand, 44168295 - 44168340
Alignment:
Q  47 gggaccaaaaatttaataaaatttaaataggaactaatgttgaaaa 92  Q
    |||| ||||||||||||||||||||| |||| ||||||||||||||    
T  44168295 gggatcaaaaatttaataaaatttaagtagggactaatgttgaaaa 44168340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 53 - 116
Target Start/End: Original strand, 12622115 - 12622178
Alignment:
Q  53 aaaaatttaataaaatttaaataggaactaatgttgaaaatacgcctatttatagagacctaaa 116  Q
    ||||||||||||||||||||||||| || ||||||||||   ||| ||||||||| ||| ||||    
T  12622115 aaaaatttaataaaatttaaatagggaccaatgttgaaagctcgcttatttatagggacttaaa 12622178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 128
Target Start/End: Complemental strand, 44166918 - 44166843
Alignment:
Q  53 aaaaatttaataaaatttaaataggaactaatgttgaaaatacgcctattta-tagagacctaaaacataattaacc 128  Q
    |||||||||||||||||||| |||| | |||||||  |||  |||||||||| |||| |||||||| ||||||||||    
T  44166918 aaaaatttaataaaatttaagtagggattaatgttagaaacgcgcctatttattaga-acctaaaatataattaacc 44166843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 68; Significance: 2e-30; HSPs: 21)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 47 - 130
Target Start/End: Complemental strand, 43440030 - 43439947
Alignment:
Q  47 gggaccaaaaatttaataaaatttaaataggaactaatgttgaaaatacgcctatttatagagacctaaaacataattaacctt 130  Q
    |||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||| ||||||||| ||||||||||||    
T  43440030 gggaccaaaaatttaataaaatttaagtaggaactaatgttgaaaacacgcctatttatagggacctaaaagataattaacctt 43439947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 47 - 128
Target Start/End: Original strand, 23318050 - 23318131
Alignment:
Q  47 gggaccaaaaatttaataaaatttaaataggaactaatgttgaaaatacgcctatttatagagacctaaaacataattaacc 128  Q
    |||||||||||||||||||||||||| |||| |||||||||| ||| |||||||||||||| ||||||||||||||||||||    
T  23318050 gggaccaaaaatttaataaaatttaagtagggactaatgttggaaacacgcctatttatagggacctaaaacataattaacc 23318131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 47 - 128
Target Start/End: Original strand, 34527615 - 34527696
Alignment:
Q  47 gggaccaaaaatttaataaaatttaaataggaactaatgttgaaaatacgcctatttatagagacctaaaacataattaacc 128  Q
    |||||||||||||||||||||||||| |||||| |||||||| ||| ||||||||||||||||| |||||||||||||||||    
T  34527615 gggaccaaaaatttaataaaatttaagtaggaattaatgttggaaacacgcctatttatagagatctaaaacataattaacc 34527696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 47 - 127
Target Start/End: Complemental strand, 23312738 - 23312658
Alignment:
Q  47 gggaccaaaaatttaataaaatttaaataggaactaatgttgaaaatacgcctatttatagagacctaaaacataattaac 127  Q
    |||||||||||||||||||||||||| |||||| |||||||| ||| |||||||||||||| |||||||||||||||||||    
T  23312738 gggaccaaaaatttaataaaatttaagtaggaattaatgttggaaacacgcctatttatagggacctaaaacataattaac 23312658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 47 - 141
Target Start/End: Original strand, 13921167 - 13921261
Alignment:
Q  47 gggaccaaaaatttaataaaatttaaataggaactaatgttgaaaatacgcctatttatagagacctaaaacataattaaccttatatttattta 141  Q
    ||||||||||||||||||||||||||||||| |||||||||| |||  ||||||||||||  ||||||||||||||||||||  || ||||||||    
T  13921167 gggaccaaaaatttaataaaatttaaatagggactaatgttggaaacgcgcctatttataaggacctaaaacataattaacccaatctttattta 13921261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 47 - 128
Target Start/End: Original strand, 26866192 - 26866273
Alignment:
Q  47 gggaccaaaaatttaataaaatttaaataggaactaatgttgaaaatacgcctatttatagagacctaaaacataattaacc 128  Q
    |||| ||||||||||||||||||||| |||| |||||||||| ||| |||||||||||||| ||||||||||||||||||||    
T  26866192 gggagcaaaaatttaataaaatttaagtagggactaatgttggaaacacgcctatttatagggacctaaaacataattaacc 26866273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 47 - 128
Target Start/End: Original strand, 41140135 - 41140216
Alignment:
Q  47 gggaccaaaaatttaataaaatttaaataggaactaatgttgaaaatacgcctatttatagagacctaaaacataattaacc 128  Q
    |||||||||||||||||||||||||| |||| |||||||||| |||  ||||||||||||| ||||||||||||||||||||    
T  41140135 gggaccaaaaatttaataaaatttaagtagggactaatgttggaaacgcgcctatttatagggacctaaaacataattaacc 41140216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 47 - 132
Target Start/End: Original strand, 43441375 - 43441459
Alignment:
Q  47 gggaccaaaaatttaataaaatttaaataggaactaatgttgaaaatacgcctatttatagagacctaaaacataattaaccttat 132  Q
    |||||||||||||||||||||||||| |||  |||||||||||||| |||||||||| ||||||||| ||||||||||||||||||    
T  43441375 gggaccaaaaatttaataaaatttaagtagagactaatgttgaaaacacgcctatttttagagacct-aaacataattaaccttat 43441459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 46 - 128
Target Start/End: Complemental strand, 34526804 - 34526722
Alignment:
Q  46 agggaccaaaaatttaataaaatttaaataggaactaatgttgaaaatacgcctatttatagagacctaaaacataattaacc 128  Q
    ||||||||||||||||||||||||||| ||| || |||||||| ||| |||||||||||||| ||||||||||||||| ||||    
T  34526804 agggaccaaaaatttaataaaatttaagtagaaattaatgttggaaacacgcctatttatagggacctaaaacataatcaacc 34526722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 47 - 128
Target Start/End: Complemental strand, 41138807 - 41138726
Alignment:
Q  47 gggaccaaaaatttaataaaatttaaataggaactaatgttgaaaatacgcctatttatagagacctaaaacataattaacc 128  Q
    |||||||||||||||||||||||||| |||| |||||||||| | |  ||||||||||||| ||||||||||||||||||||    
T  41138807 gggaccaaaaatttaataaaatttaagtagggactaatgttggagacgcgcctatttatagggacctaaaacataattaacc 41138726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 47 - 131
Target Start/End: Original strand, 8218514 - 8218599
Alignment:
Q  47 gggaccaaaaatttaataaaatttaaataggaactaa-tgttgaaaatacgcctatttatagagacctaaaacataattaacctta 131  Q
    ||||||||||| |||||||||||||| |||| ||||| ||||| ||| || ||||||||||||||||||||| |||||||||||||    
T  8218514 gggaccaaaaacttaataaaatttaagtagggactaaatgttggaaacacacctatttatagagacctaaaatataattaacctta 8218599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 42 - 126
Target Start/End: Original strand, 18951153 - 18951237
Alignment:
Q  42 tgttagggaccaaaaatttaataaaatttaaataggaactaatgttgaaaatacgcctatttatagagacctaaaacataattaa 126  Q
    |||| |||| ||||||||||||||||||||| |||| |||||||||| ||| |||| ||||||||  ||||||||||||||||||    
T  18951153 tgttggggatcaaaaatttaataaaatttaagtagggactaatgttggaaacacgcttatttataaggacctaaaacataattaa 18951237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 47 - 126
Target Start/End: Complemental strand, 38691769 - 38691690
Alignment:
Q  47 gggaccaaaaatttaataaaatttaaataggaactaatgttgaaaatacgcctatttatagagacctaaaacataattaa 126  Q
    ||||||||| |||||||||||||||| |||| | |||||||  ||| |||||||| ||||||||||||||||||||||||    
T  38691769 gggaccaaatatttaataaaatttaagtagggattaatgttagaaaaacgcctatatatagagacctaaaacataattaa 38691690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 47 - 130
Target Start/End: Original strand, 38693953 - 38694036
Alignment:
Q  47 gggaccaaaaatttaataaaatttaaataggaactaatgttgaaaatacgcctatttatagagacctaaaacataattaacctt 130  Q
    |||| ||||||||||||||||||||| | || | |||| ||| ||| |||||||||||||| ||||||||||||||||||||||    
T  38693953 gggatcaaaaatttaataaaatttaagtggggattaatattggaaacacgcctatttatagggacctaaaacataattaacctt 38694036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 47 - 130
Target Start/End: Complemental strand, 19116939 - 19116857
Alignment:
Q  47 gggaccaaaaatttaataaaatttaaataggaactaatgttgaaaatacgcctatttatagagacctaaaacataattaacctt 130  Q
    |||||||||||||||||||||||||| |||| |||||| |||||||| | ||||||||  | ||| ||||||||||||||||||    
T  19116939 gggaccaaaaatttaataaaatttaagtagggactaatattgaaaatgcacctattta-cgggacataaaacataattaacctt 19116857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 47 - 126
Target Start/End: Complemental strand, 26865012 - 26864933
Alignment:
Q  47 gggaccaaaaatttaataaaatttaaataggaactaatgttgaaaatacgcctatttatagagacctaaaacataattaa 126  Q
    ||||||||||||| |||||||||||| |||| |||||||||  |||  ||| ||||||||| ||||||||||||||||||    
T  26865012 gggaccaaaaattgaataaaatttaagtagggactaatgttagaaacgcgcttatttatagggacctaaaacataattaa 26864933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 47 - 133
Target Start/End: Complemental strand, 8217297 - 8217211
Alignment:
Q  47 gggaccaaaaatttaataaaatttaaataggaactaatgttgaaaatacgcctatttatagagacctaaaacataattaaccttata 133  Q
    |||||||||||||||||||||||||  | ||  ||||||||| ||| || |||||||||||  ||||||||||||||||||| ||||    
T  8217297 gggaccaaaaatttaataaaatttatgttggggctaatgttggaaacacacctatttataggaacctaaaacataattaaccctata 8217211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 47 - 128
Target Start/End: Complemental strand, 20898527 - 20898446
Alignment:
Q  47 gggaccaaaaatttaataaaatttaaataggaactaatgttgaaaatacgcctatttatagagacctaaaacataattaacc 128  Q
    |||||||||||||||||| ||||||| | ||  ||||||||| ||| || |||| |||||| ||||| ||||||||||||||    
T  20898527 gggaccaaaaatttaatacaatttaagttggggctaatgttggaaacacacctaattatagggaccttaaacataattaacc 20898446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 44 - 128
Target Start/End: Original strand, 28381324 - 28381408
Alignment:
Q  44 ttagggaccaaaaatttaataaaatttaaataggaactaatgttgaaaatacgcctatttatagagacctaaaacataattaacc 128  Q
    ||||||||||||||||  ||||||||||| || | |||||| || ||||  ||| ||||||||  ||||||||||||||||||||    
T  28381324 ttagggaccaaaaattatataaaatttaagtatggactaatattaaaaacgcgcatatttataaggacctaaaacataattaacc 28381408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 53 - 128
Target Start/End: Original strand, 3407430 - 3407505
Alignment:
Q  53 aaaaatttaataaaatttaaataggaactaatgttgaaaatacgcctatttatagagacctaaaacataattaacc 128  Q
    |||||||||||||||||| | |||| || ||||||||||   ||| ||||| ||| ||||| ||||||||||||||    
T  3407430 aaaaatttaataaaattttagtagggaccaatgttgaaagctcgcttatttgtagggaccttaaacataattaacc 3407505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 55 - 128
Target Start/End: Original strand, 2263335 - 2263408
Alignment:
Q  55 aaatttaataaaatttaaataggaactaatgttgaaaatacgcctatttatagagacctaaaacataattaacc 128  Q
    ||||||||||||||||||||||| || ||||||| || |  || |||||  || ||||| ||||||||||||||    
T  2263335 aaatttaataaaatttaaatagggaccaatgttggaagtttgcttatttgaagggaccttaaacataattaacc 2263408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 66; Significance: 3e-29; HSPs: 27)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 47 - 128
Target Start/End: Complemental strand, 35054965 - 35054884
Alignment:
Q  47 gggaccaaaaatttaataaaatttaaataggaactaatgttgaaaatacgcctatttatagagacctaaaacataattaacc 128  Q
    |||||||||||||||||||||||||| |||||||||||||||||||| || |||||||||| ||||||||||||||||||||    
T  35054965 gggaccaaaaatttaataaaatttaagtaggaactaatgttgaaaatgcgtctatttatagggacctaaaacataattaacc 35054884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 47 - 128
Target Start/End: Original strand, 10322832 - 10322913
Alignment:
Q  47 gggaccaaaaatttaataaaatttaaataggaactaatgttgaaaatacgcctatttatagagacctaaaacataattaacc 128  Q
    |||||||||||||||||||||||||| |||| |||||||||| |||  ||||||||||||| ||||||||||||||||||||    
T  10322832 gggaccaaaaatttaataaaatttaagtagggactaatgttggaaactcgcctatttatagggacctaaaacataattaacc 10322913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 47 - 128
Target Start/End: Complemental strand, 33688456 - 33688375
Alignment:
Q  47 gggaccaaaaatttaataaaatttaaataggaactaatgttgaaaatacgcctatttatagagacctaaaacataattaacc 128  Q
    |||||||||||||||||||||||||| ||||||||||||||| |||  | ||||||||||| ||||||||||||||||||||    
T  33688456 gggaccaaaaatttaataaaatttaagtaggaactaatgttggaaacgcacctatttatagggacctaaaacataattaacc 33688375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 47 - 128
Target Start/End: Original strand, 35061329 - 35061410
Alignment:
Q  47 gggaccaaaaatttaataaaatttaaataggaactaatgttgaaaatacgcctatttatagagacctaaaacataattaacc 128  Q
    |||| ||||||||||||||||||||| |||| ||||||||||||||  ||||||||||||| ||||||||||||||||||||    
T  35061329 gggatcaaaaatttaataaaatttaagtagggactaatgttgaaaacgcgcctatttatagggacctaaaacataattaacc 35061410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 47 - 128
Target Start/End: Complemental strand, 44208656 - 44208575
Alignment:
Q  47 gggaccaaaaatttaataaaatttaaataggaactaatgttgaaaatacgcctatttatagagacctaaaacataattaacc 128  Q
    |||||||||||||||||||||||||| |||| ||||||||||||||  || ||||||||| |||||||||||||||||||||    
T  44208656 gggaccaaaaatttaataaaatttaagtagggactaatgttgaaaacgcgtctatttataaagacctaaaacataattaacc 44208575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 49 - 128
Target Start/End: Complemental strand, 31470741 - 31470662
Alignment:
Q  49 gaccaaaaatttaataaaatttaaataggaactaatgttgaaaatacgcctatttatagagacctaaaacataattaacc 128  Q
    |||||||||||||||||||||||| |||| |||||||||||||| | |||||||||||  ||||||||||||||||||||    
T  31470741 gaccaaaaatttaataaaatttaagtagggactaatgttgaaaacatgcctatttataaggacctaaaacataattaacc 31470662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 47 - 128
Target Start/End: Original strand, 31318069 - 31318150
Alignment:
Q  47 gggaccaaaaatttaataaaatttaaataggaactaatgttgaaaatacgcctatttatagagacctaaaacataattaacc 128  Q
    |||||||||||||||||||||||||| |||| |||||||||  |||  ||||||||||||| ||||||||||||||||||||    
T  31318069 gggaccaaaaatttaataaaatttaagtagggactaatgttagaaacgcgcctatttatagggacctaaaacataattaacc 31318150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 48 - 128
Target Start/End: Original strand, 13086444 - 13086524
Alignment:
Q  48 ggaccaaaaatttaataaaatttaaataggaactaatgttgaaaatacgcctatttatagagacctaaaacataattaacc 128  Q
    ||||||||||||||||||||||||| | || ||||||||||||||| |||||||||||||  |||| ||||||||||||||    
T  13086444 ggaccaaaaatttaataaaatttaagttgggactaatgttgaaaatgcgcctatttataggaaccttaaacataattaacc 13086524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 42 - 128
Target Start/End: Complemental strand, 53568939 - 53568853
Alignment:
Q  42 tgttagggaccaaaaatttaataaaatttaaataggaactaatgttgaaaatacgcctatttatagagacctaaaacataattaacc 128  Q
    |||| |||||||||||||||||||||||||| ||   | |||||||||||| ||||||||||||||  |||||||||||||||||||    
T  53568939 tgttggggaccaaaaatttaataaaatttaagtaaagattaatgttgaaaacacgcctatttataggaacctaaaacataattaacc 53568853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 48 - 128
Target Start/End: Complemental strand, 11669900 - 11669820
Alignment:
Q  48 ggaccaaaaatttaataaaatttaaataggaactaatgttgaaaatacgcctatttatagagacctaaaacataattaacc 128  Q
    |||||||| ||||||||||||||||||||| |||||||||| |||  ||||| ||||||| ||||||||||| ||||||||    
T  11669900 ggaccaaatatttaataaaatttaaatagggactaatgttggaaacgcgcctttttatagggacctaaaacacaattaacc 11669820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 47 - 125
Target Start/End: Original strand, 25423198 - 25423276
Alignment:
Q  47 gggaccaaaaatttaataaaatttaaataggaactaatgttgaaaatacgcctatttatagagacctaaaacataatta 125  Q
    |||||||||||||||||||||||||| |||| |||||||||| |||  |||||||||||||   |||||||||||||||    
T  25423198 gggaccaaaaatttaataaaatttaagtagggactaatgttggaaacgcgcctatttataggatcctaaaacataatta 25423276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 47 - 128
Target Start/End: Complemental strand, 15562709 - 15562629
Alignment:
Q  47 gggaccaaaaatttaataaaatttaaataggaactaatgttgaaaatacgcctatttatagagacctaaaacataattaacc 128  Q
    ||||||||||||| |||||| ||||| |||| |||||||||| |||  ||||||||||||| ||||||||||||||||||||    
T  15562709 gggaccaaaaattcaataaa-tttaagtagggactaatgttggaaacgcgcctatttatagggacctaaaacataattaacc 15562629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 53 - 126
Target Start/End: Original strand, 25244123 - 25244196
Alignment:
Q  53 aaaaatttaataaaatttaaataggaactaatgttgaaaatacgcctatttatagagacctaaaacataattaa 126  Q
    ||||||||||||||||||||||||||| |||||||| |||  ||||||||||||| |||  |||||||||||||    
T  25244123 aaaaatttaataaaatttaaataggaattaatgttggaaacgcgcctatttatagggactcaaaacataattaa 25244196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 49 - 128
Target Start/End: Original strand, 45046730 - 45046809
Alignment:
Q  49 gaccaaaaatttaataaaatttaaataggaactaatgttgaaaatacgcctatttatagagacctaaaacataattaacc 128  Q
    |||||||||||||||||||||||| |||| |||||||||| |||  || |||||||||| ||||| ||| ||||||||||    
T  45046730 gaccaaaaatttaataaaatttaagtagggactaatgttggaaacgcgtctatttatagggaccttaaagataattaacc 45046809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 47 - 128
Target Start/End: Original strand, 40171413 - 40171494
Alignment:
Q  47 gggaccaaaaatttaataaaatttaaataggaactaatgttgaaaatacgcctatttatagagacctaaaacataattaacc 128  Q
    ||||| |||||||||||||||||||| |||  | |||||||| |||  | ||||||||||||||||| ||||||||||||||    
T  40171413 gggacaaaaaatttaataaaatttaagtagagattaatgttggaaacgcacctatttatagagaccttaaacataattaacc 40171494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 47 - 128
Target Start/End: Original strand, 53572040 - 53572121
Alignment:
Q  47 gggaccaaaaatttaataaaatttaaataggaactaatgttgaaaatacgcctatttatagagacctaaaacataattaacc 128  Q
    |||| ||||||||||||||||||||| |||  ||||||||| |||| || |||||||||||  |||||||| ||||||||||    
T  53572040 gggatcaaaaatttaataaaatttaagtagagactaatgttaaaaacacacctatttataggaacctaaaatataattaacc 53572121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 48 - 128
Target Start/End: Complemental strand, 45045281 - 45045201
Alignment:
Q  48 ggaccaaaaatttaataaaatttaaataggaactaatgttgaaaatacgcctatttatagagacctaaaacataattaacc 128  Q
    |||| |||||| |||||||||||||||||| |||||||||| |||| ||| |||||||||  || | ||||||||||||||    
T  45045281 ggactaaaaatataataaaatttaaatagggactaatgttggaaatgcgcatatttataggaactttaaacataattaacc 45045201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 54 - 128
Target Start/End: Complemental strand, 40170145 - 40170071
Alignment:
Q  54 aaaatttaataaaatttaaataggaactaatgttgaaaatacgcctatttatagagacctaaaacataattaacc 128  Q
    ||||| |||||||||||||||| | |||||||||| ||| | |||||||| ||  ||||||||||||||||||||    
T  40170145 aaaatataataaaatttaaatatggactaatgttggaaacaagcctatttgtaaggacctaaaacataattaacc 40170071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 47 - 128
Target Start/End: Original strand, 44209998 - 44210079
Alignment:
Q  47 gggaccaaaaatttaataaaatttaaataggaactaatgttgaaaatacgcctatttatagagacctaaaacataattaacc 128  Q
    |||| ||||||||||||||||||||| ||   ||||||||| ||||  ||||||||||||| ||| |||||||| |||||||    
T  44209998 gggatcaaaaatttaataaaatttaagtaaagactaatgttaaaaacgcgcctatttatagggacgtaaaacatgattaacc 44210079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 68 - 128
Target Start/End: Complemental strand, 10321463 - 10321403
Alignment:
Q  68 tttaaataggaactaatgttgaaaatacgcctatttatagagacctaaaacataattaacc 128  Q
    ||||| ||||||||||||||| |||  ||||||||||||| || |||||||||||||||||    
T  10321463 tttaagtaggaactaatgttggaaacgcgcctatttatagggatctaaaacataattaacc 10321403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 55 - 127
Target Start/End: Complemental strand, 25421837 - 25421766
Alignment:
Q  55 aaatttaataaaatttaaataggaactaatgttgaaaatacgcctatttatagagacctaaaacataattaac 127  Q
    |||||||||||||||||| || | |||  |||||||||| | ||||||||||| |||||||||||||||||||    
T  25421837 aaatttaataaaatttaagtaaggactgttgttgaaaatgcacctatttatag-gacctaaaacataattaac 25421766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 53 - 128
Target Start/End: Complemental strand, 44451839 - 44451763
Alignment:
Q  53 aaaaatttaataaaatttaaataggaactaatgttgaaaatacgcctatttata-gagacctaaaacataattaacc 128  Q
    |||||||||||||||||||||||||||| |||||||||||  ||  | |||||| | ||||| ||||||||||||||    
T  44451839 aaaaatttaataaaatttaaataggaaccaatgttgaaaactcgtttctttataggggaccttaaacataattaacc 44451763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 53 - 124
Target Start/End: Complemental strand, 31316313 - 31316242
Alignment:
Q  53 aaaaatttaataaaatttaaataggaactaatgttgaaaatacgcctatttatagagacctaaaacataatt 124  Q
    |||||||||||||||||||| |||| |||||||||| |||  | ||||||||||  || |||||||||||||    
T  31316313 aaaaatttaataaaatttaagtagggactaatgttggaaacgcacctatttataaggatctaaaacataatt 31316242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 55 - 128
Target Start/End: Complemental strand, 53570780 - 53570708
Alignment:
Q  55 aaatttaataaaatttaaataggaactaatgttgaaaatacgcctatttatagagacctaaaacataattaacc 128  Q
    |||||||||||||||||| || | ||||||||| ||||    |||||||||||| |||||||||||||||||||    
T  53570780 aaatttaataaaatttaagtatggactaatgttaaaaacgaacctatttataga-acctaaaacataattaacc 53570708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 53 - 128
Target Start/End: Complemental strand, 28162987 - 28162912
Alignment:
Q  53 aaaaatttaataaaatttaaataggaactaatgttgaaaatacgcctatttatagagacctaaaacataattaacc 128  Q
    |||||||||||||||||| |||||| |  ||||||| ||   ||| ||||| ||||||||| ||||||||||||||    
T  28162987 aaaaatttaataaaattttaatagggatcaatgttggaagctcgcttatttgtagagaccttaaacataattaacc 28162912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 53 - 128
Target Start/End: Original strand, 34513574 - 34513649
Alignment:
Q  53 aaaaatttaataaaatttaaataggaactaatgttgaaaatacgcctatttatagagacctaaaacataattaacc 128  Q
    |||||||||||||||||| |||||| || ||||||| ||   ||| ||||| ||| ||||| ||||||||||||||    
T  34513574 aaaaatttaataaaattttaatagggaccaatgttggaagctcgcttatttgtagggaccttaaacataattaacc 34513649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 47 - 127
Target Start/End: Original strand, 37329912 - 37329996
Alignment:
Q  47 gggaccaaaaatttaataaaatttaaataggaactaatgttgaaaatacgc----ctatttatagagacctaaaacataattaac 127  Q
    |||||||||||||||| ||||| ||  |||| |||||||||| ||| || |    |||||||||| |||||||||||||||||||    
T  37329912 gggaccaaaaatttaacaaaatgtatgtagggactaatgttggaaacacacctatctatttatagggacctaaaacataattaac 37329996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 66; Significance: 3e-29; HSPs: 31)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 48 - 137
Target Start/End: Complemental strand, 27867856 - 27867767
Alignment:
Q  48 ggaccaaaaatttaataaaatttaaataggaactaatgttgaaaatacgcctatttatagagacctaaaacataattaaccttatattta 137  Q
    ||||||||||||||||||||||||| || ||||||||||||||||  ||||||||||||| |||||||||||||||||||| ||||||||    
T  27867856 ggaccaaaaatttaataaaatttaagtatgaactaatgttgaaaactcgcctatttatagggacctaaaacataattaaccctatattta 27867767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 48 - 127
Target Start/End: Original strand, 32148114 - 32148193
Alignment:
Q  48 ggaccaaaaatttaataaaatttaaataggaactaatgttgaaaatacgcctatttatagagacctaaaacataattaac 127  Q
    |||| ||||||||||||||||||||| |||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  32148114 ggacaaaaaatttaataaaatttaaacaggaactaatgttggaaatacgcctatttatagggacctaaaacataattaac 32148193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 42 - 128
Target Start/End: Complemental strand, 50614331 - 50614245
Alignment:
Q  42 tgttagggaccaaaaatttaataaaatttaaataggaactaatgttgaaaatacgcctatttatagagacctaaaacataattaacc 128  Q
    |||| |||||||||||||||||||||||||| |||| ||||||||||||||  ||||||||||||||||| ||||||||| ||||||    
T  50614331 tgttggggaccaaaaatttaataaaatttaagtagggactaatgttgaaaacgcgcctatttatagagacttaaaacatatttaacc 50614245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 47 - 128
Target Start/End: Original strand, 117947 - 118028
Alignment:
Q  47 gggaccaaaaatttaataaaatttaaataggaactaatgttgaaaatacgcctatttatagagacctaaaacataattaacc 128  Q
    |||||||||||||||||||||||||| |||  |||||||||| ||| |||||||||||||| ||||||||||||||||||||    
T  117947 gggaccaaaaatttaataaaatttaagtagagactaatgttggaaacacgcctatttatagggacctaaaacataattaacc 118028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 47 - 128
Target Start/End: Original strand, 37180079 - 37180160
Alignment:
Q  47 gggaccaaaaatttaataaaatttaaataggaactaatgttgaaaatacgcctatttatagagacctaaaacataattaacc 128  Q
    |||||||||||||||||||||||||| |||| |||||||||| ||| |||||||||||||| |||||||||| |||||||||    
T  37180079 gggaccaaaaatttaataaaatttaagtagggactaatgttggaaacacgcctatttatagggacctaaaacgtaattaacc 37180160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 53 - 128
Target Start/End: Complemental strand, 32146774 - 32146699
Alignment:
Q  53 aaaaatttaataaaatttaaataggaactaatgttgaaaatacgcctatttatagagacctaaaacataattaacc 128  Q
    |||||||||||||||||||| || |||||||||||| |||||||||||||||||  ||||||||||||||||||||    
T  32146774 aaaaatttaataaaatttaagtatgaactaatgttggaaatacgcctatttatatggacctaaaacataattaacc 32146699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 47 - 125
Target Start/End: Complemental strand, 116704 - 116626
Alignment:
Q  47 gggaccaaaaatttaataaaatttaaataggaactaatgttgaaaatacgcctatttatagagacctaaaacataatta 125  Q
    |||||||||||||||||||||||||| |||| |||||||||| ||| |||| ||||||||| |||||||||||||||||    
T  116704 gggaccaaaaatttaataaaatttaagtagggactaatgttggaaacacgcttatttatagggacctaaaacataatta 116626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 48 - 130
Target Start/End: Complemental strand, 54185381 - 54185299
Alignment:
Q  48 ggaccaaaaatttaataaaatttaaataggaactaatgttgaaaatacgcctatttatagagacctaaaacataattaacctt 130  Q
    ||||||||||||||||||||||||| ||||||||||||||| |||  ||||||||||||  ||||||||||||||||| ||||    
T  54185381 ggaccaaaaatttaataaaatttaagtaggaactaatgttggaaacgcgcctatttataaggacctaaaacataattaccctt 54185299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 46 - 128
Target Start/End: Original strand, 44558080 - 44558162
Alignment:
Q  46 agggaccaaaaatttaataaaatttaaataggaactaatgttgaaaatacgcctatttatagagacctaaaacataattaacc 128  Q
    |||||| |||||||||||||||||||| |||| |||||||||| |||  || |||||||||| ||||||||||||||||||||    
T  44558080 agggacgaaaaatttaataaaatttaagtagggactaatgttggaaacgcgtctatttatagggacctaaaacataattaacc 44558162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 50 - 128
Target Start/End: Original strand, 32944124 - 32944202
Alignment:
Q  50 accaaaaatttaataaaatttaaataggaactaatgttgaaaatacgcctatttatagagacctaaaacataattaacc 128  Q
    ||||||||||||||||||||||| |||  ||||||||| ||||   |||||||||||| ||||||||||||||||||||    
T  32944124 accaaaaatttaataaaatttaagtagagactaatgttaaaaacgtgcctatttatagggacctaaaacataattaacc 32944202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 50 - 127
Target Start/End: Original strand, 19831131 - 19831208
Alignment:
Q  50 accaaaaatttaataaaatttaaataggaactaatgttgaaaatacgcctatttatagagacctaaaacataattaac 127  Q
    ||||||||||||||||||||||| |||| |||||||||| ||| || | ||||||||| ||||| |||||||||||||    
T  19831131 accaaaaatttaataaaatttaagtagggactaatgttggaaacacacttatttatagggaccttaaacataattaac 19831208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 47 - 128
Target Start/End: Complemental strand, 32942769 - 32942688
Alignment:
Q  47 gggaccaaaaatttaataaaatttaaataggaactaatgttgaaaatacgcctatttatagagacctaaaacataattaacc 128  Q
    |||| ||||||||||||||||||||| |||| |||||||||  ||| | |||| ||||||| ||||||||||||||||||||    
T  32942769 gggatcaaaaatttaataaaatttaagtagggactaatgttagaaacatgcctctttatagggacctaaaacataattaacc 32942688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 47 - 128
Target Start/End: Complemental strand, 45234496 - 45234416
Alignment:
Q  47 gggaccaaaaatttaataaaatttaaataggaactaatgttgaaaatacgcctatttatagagacctaaaacataattaacc 128  Q
    |||| ||||||||||||||||||||| |||| |||||||||| |||  | ||||||||||| ||||||||||||||||||||    
T  45234496 gggatcaaaaatttaataaaatttaagtagggactaatgttggaaacgcacctatttatag-gacctaaaacataattaacc 45234416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 53 - 128
Target Start/End: Original strand, 33476698 - 33476773
Alignment:
Q  53 aaaaatttaataaaatttaaataggaactaatgttgaaaatacgcctatttatagagacctaaaacataattaacc 128  Q
    ||||||||||||||||||||||||| || ||| ||||||   ||| ||||||||||||||| ||||||||||||||    
T  33476698 aaaaatttaataaaatttaaatagggaccaatattgaaagctcgcttatttatagagaccttaaacataattaacc 33476773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 42 - 128
Target Start/End: Original strand, 54185834 - 54185920
Alignment:
Q  42 tgttagggaccaaaaatttaataaaatttaaataggaactaatgttgaaaatacgcctatttatagagacctaaaacataattaacc 128  Q
    |||| |||| ||||||||||||||||||||| || | | |||||||||||| |||||||||||||   || ||||||||||||||||    
T  54185834 tgttggggatcaaaaatttaataaaatttaagtatggattaatgttgaaaacacgcctatttataagaacataaaacataattaacc 54185920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 53 - 117
Target Start/End: Complemental strand, 53439097 - 53439033
Alignment:
Q  53 aaaaatttaataaaatttaaataggaactaatgttgaaaatacgcctatttatagagacctaaaa 117  Q
    |||||||||||||||||||| ||||||||||||||  ||| |||||||||||||| ||| |||||    
T  53439097 aaaaatttaataaaatttaagtaggaactaatgttagaaacacgcctatttatagggacataaaa 53439033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 53 - 128
Target Start/End: Complemental strand, 41927024 - 41926949
Alignment:
Q  53 aaaaatttaataaaatttaaataggaactaatgttgaaaatacgcctatttatagagacctaaaacataattaacc 128  Q
    ||||||||||||||||||||||||| || ||||||| ||   ||| ||||||||| ||||| ||||||||||||||    
T  41927024 aaaaatttaataaaatttaaatagggaccaatgttggaagctcgcttatttatagggaccttaaacataattaacc 41926949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 53 - 124
Target Start/End: Original strand, 45235865 - 45235936
Alignment:
Q  53 aaaaatttaataaaatttaaataggaactaatgttgaaaatacgcctatttatagagacctaaaacataatt 124  Q
    |||||||||||||||||||| || |||||||| || |||| |||||||||||||   |||||||||||||||    
T  45235865 aaaaatttaataaaatttaagtaagaactaatattaaaaacacgcctatttataagtacctaaaacataatt 45235936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 47 - 117
Target Start/End: Complemental strand, 37178719 - 37178649
Alignment:
Q  47 gggaccaaaaatttaataaaatttaaataggaactaatgttgaaaatacgcctatttatagagacctaaaa 117  Q
    |||| ||||||||||||||||||||| || | | |||||||| ||| |||||||||||||| |||||||||    
T  37178719 gggatcaaaaatttaataaaatttaagtatggattaatgttggaaacacgcctatttatagggacctaaaa 37178649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 47 - 128
Target Start/End: Complemental strand, 19825362 - 19825281
Alignment:
Q  47 gggaccaaaaatttaataaaatttaaataggaactaatgttgaaaatacgcctatttatagagacctaaaacataattaacc 128  Q
    ||||||||||||||||| |||||||| |||  |||||||||| | | ||| |||||||||| ||||| | ||||||||||||    
T  19825362 gggaccaaaaatttaattaaatttaagtagagactaatgttggagacacgtctatttatagggaccttagacataattaacc 19825281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 47 - 128
Target Start/End: Original strand, 41786589 - 41786670
Alignment:
Q  47 gggaccaaaaatttaataaaatttaaataggaactaatgttgaaaatacgcctatttatagagacctaaaacataattaacc 128  Q
    |||| ||||||||||||||||||||| |||| | |||||||| ||| |  |||||||| || || |||||||||||||||||    
T  41786589 gggatcaaaaatttaataaaatttaagtagggaataatgttggaaacaaacctatttacagggatctaaaacataattaacc 41786670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 53 - 133
Target Start/End: Complemental strand, 53244788 - 53244708
Alignment:
Q  53 aaaaatttaataaaatttaaataggaactaatgttgaaaatacgcctatttatagagacctaaaacataattaaccttata 133  Q
    ||||||||| |||||||||| |||| ||||||||||||||   |||||||| ||  ||||| |||||||||||||| ||||    
T  53244788 aaaaatttattaaaatttaagtagggactaatgttgaaaacgtgcctatttgtatggacctcaaacataattaaccctata 53244708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 53 - 128
Target Start/End: Original strand, 31992189 - 31992264
Alignment:
Q  53 aaaaatttaataaaatttaaataggaactaatgttgaaaatacgcctatttatagagacctaaaacataattaacc 128  Q
    |||||||||||||||||||||||||||  ||||||||||   ||| ||||| ||| ||||  ||||||||||||||    
T  31992189 aaaaatttaataaaatttaaataggaatcaatgttgaaagctcgcttatttgtagggaccataaacataattaacc 31992264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 48 - 127
Target Start/End: Original strand, 50615588 - 50615666
Alignment:
Q  48 ggaccaaaaatttaataaaatttaaataggaactaatgttgaaaatacgcctatttatagagacctaaaacataattaac 127  Q
    ||||||||||||||||| ||| ||| || | |||||||||  |||  |||||||||||| ||||||||||||||||||||    
T  50615588 ggaccaaaaatttaatagaatgtaagtaaggactaatgttagaaacgcgcctatttata-agacctaaaacataattaac 50615666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 48 - 128
Target Start/End: Original strand, 3670720 - 3670800
Alignment:
Q  48 ggaccaaaaatttaataaaatttaaataggaactaatgttgaaaatacgcctatttatagagacctaaaacataattaacc 128  Q
    ||||||||||| ||||||||||||| |||  |  ||||||| ||| ||| |||||||||  ||||| ||||||||||||||    
T  3670720 ggaccaaaaatataataaaatttaagtagagatcaatgttggaaacacgtctatttataaggaccttaaacataattaacc 3670800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 52 - 104
Target Start/End: Complemental strand, 19669472 - 19669420
Alignment:
Q  52 caaaaatttaataaaatttaaataggaactaatgttgaaaatacgcctattta 104  Q
    ||||||||||||||||||||| |||| |||||||||| |||  ||||||||||    
T  19669472 caaaaatttaataaaatttaagtagggactaatgttggaaacgcgcctattta 19669420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 53 - 88
Target Start/End: Original strand, 8576448 - 8576483
Alignment:
Q  53 aaaaatttaataaaatttaaataggaactaatgttg 88  Q
    ||||||||||||||||||||||||| ||||||||||    
T  8576448 aaaaatttaataaaatttaaatagggactaatgttg 8576483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 53 - 128
Target Start/End: Original strand, 25233404 - 25233479
Alignment:
Q  53 aaaaatttaataaaatttaaataggaactaatgttgaaaatacgcctatttatagagacctaaaacataattaacc 128  Q
    ||||||||||||||||||||||||| || ||||||| ||   ||| ||||| ||| ||||| |||||||| |||||    
T  25233404 aaaaatttaataaaatttaaatagggaccaatgttggaagctcgcttatttgtagggaccttaaacataagtaacc 25233479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 126
Target Start/End: Original strand, 53246660 - 53246730
Alignment:
Q  56 aatttaataaaatttaaataggaactaatgttgaaaatacgcctatttatagagacctaaaacataattaa 126  Q
    |||||| |||||||||| |||| | |||||||||||| || | ||||||||  ||||| ||||||||||||    
T  53246660 aatttattaaaatttaagtagggattaatgttgaaaacacacttatttatatggaccttaaacataattaa 53246730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 47 - 88
Target Start/End: Original strand, 1430419 - 1430460
Alignment:
Q  47 gggaccaaaaatttaataaaatttaaataggaactaatgttg 88  Q
    |||||||||||||||||||||||||| |||| ||| ||||||    
T  1430419 gggaccaaaaatttaataaaatttaagtagggactgatgttg 1430460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 128
Target Start/End: Complemental strand, 45387216 - 45387152
Alignment:
Q  64 aaaatttaaataggaactaatgttgaaaatacgcctatttatagagacctaaaacataattaacc 128  Q
    ||||||||| || | |||||||||| |||  ||||||||||||| ||| |||||| |||||||||    
T  45387216 aaaatttaagtatggactaatgttggaaacgcgcctatttatagggacgtaaaacctaattaacc 45387152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 62; Significance: 7e-27; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 47 - 128
Target Start/End: Complemental strand, 1692667 - 1692586
Alignment:
Q  47 gggaccaaaaatttaataaaatttaaataggaactaatgttgaaaatacgcctatttatagagacctaaaacataattaacc 128  Q
    |||||||||||||||||||||||||| |||| |||| ||||||||| |||||||||||||||||||||| ||||||||||||    
T  1692667 gggaccaaaaatttaataaaatttaagtagggactactgttgaaaacacgcctatttatagagacctaatacataattaacc 1692586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 47 - 128
Target Start/End: Complemental strand, 37705915 - 37705834
Alignment:
Q  47 gggaccaaaaatttaataaaatttaaataggaactaatgttgaaaatacgcctatttatagagacctaaaacataattaacc 128  Q
    |||||||||||||||||||||||||| |||| ||||||||||||||  ||||||||||||| ||||||||||||||||||||    
T  37705915 gggaccaaaaatttaataaaatttaagtagggactaatgttgaaaacgcgcctatttatagggacctaaaacataattaacc 37705834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 43 - 126
Target Start/End: Original strand, 21136451 - 21136534
Alignment:
Q  43 gttagggaccaaaaatttaataaaatttaaataggaactaatgttgaaaatacgcctatttatagagacctaaaacataattaa 126  Q
    |||||| ||||||||||||||||||||||| |||| |||||||||| ||| |||||||||||||| ||||||||||||||||||    
T  21136451 gttaggaaccaaaaatttaataaaatttaagtagggactaatgttggaaacacgcctatttatagggacctaaaacataattaa 21136534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 47 - 128
Target Start/End: Complemental strand, 13322965 - 13322884
Alignment:
Q  47 gggaccaaaaatttaataaaatttaaataggaactaatgttgaaaatacgcctatttatagagacctaaaacataattaacc 128  Q
    |||||||||||||||||||||||||| |||| |||||||||| ||| | |||||||||||| ||||||||||||||||||||    
T  13322965 gggaccaaaaatttaataaaatttaagtagggactaatgttggaaacatgcctatttatagggacctaaaacataattaacc 13322884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 47 - 128
Target Start/End: Original strand, 35370203 - 35370283
Alignment:
Q  47 gggaccaaaaatttaataaaatttaaataggaactaatgttgaaaatacgcctatttatagagacctaaaacataattaacc 128  Q
    |||||||||||||||||||| ||||  ||||||||||||||||||| |||||||||||||| ||||||||||||||||||||    
T  35370203 gggaccaaaaatttaataaa-tttatgtaggaactaatgttgaaaacacgcctatttatagggacctaaaacataattaacc 35370283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 47 - 128
Target Start/End: Complemental strand, 36062582 - 36062501
Alignment:
Q  47 gggaccaaaaatttaataaaatttaaataggaactaatgttgaaaatacgcctatttatagagacctaaaacataattaacc 128  Q
    ||||||||||||||||||||||||||||||  ||||||||||||||  ||||||||||||  ||||||||||||||||||||    
T  36062582 gggaccaaaaatttaataaaatttaaatagagactaatgttgaaaacgcgcctatttataaggacctaaaacataattaacc 36062501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 47 - 128
Target Start/End: Original strand, 39338033 - 39338114
Alignment:
Q  47 gggaccaaaaatttaataaaatttaaataggaactaatgttgaaaatacgcctatttatagagacctaaaacataattaacc 128  Q
    |||||||||||||||||||||||||| |||| |||||||||| ||| |||||||||||||| || |||||||||||||||||    
T  39338033 gggaccaaaaatttaataaaatttaagtagggactaatgttggaaacacgcctatttatagggatctaaaacataattaacc 39338114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 48 - 128
Target Start/End: Complemental strand, 39336794 - 39336714
Alignment:
Q  48 ggaccaaaaatttaataaaatttaaataggaactaatgttgaaaatacgcctatttatagagacctaaaacataattaacc 128  Q
    ||||||||||||||||||||||||| ||||  ||||||||| |||| ||||||||||||| ||||||||||||||||||||    
T  39336794 ggaccaaaaatttaataaaatttaagtagggtctaatgttggaaatgcgcctatttatagggacctaaaacataattaacc 39336714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 53 - 128
Target Start/End: Complemental strand, 35368962 - 35368887
Alignment:
Q  53 aaaaatttaataaaatttaaataggaactaatgttgaaaatacgcctatttatagagacctaaaacataattaacc 128  Q
    |||||||||||||||||||| |||| |||||||||||||| ||||||||||||||  |||||||||||||||||||    
T  35368962 aaaaatttaataaaatttaagtaggtactaatgttgaaaacacgcctatttataggaacctaaaacataattaacc 35368887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 47 - 128
Target Start/End: Original strand, 13324065 - 13324146
Alignment:
Q  47 gggaccaaaaatttaataaaatttaaataggaactaatgttgaaaatacgcctatttatagagacctaaaacataattaacc 128  Q
    |||| ||||||||||||||||||||| |||| |||||||||| |||  ||||||||||||| ||||||||||||||||||||    
T  13324065 gggatcaaaaatttaataaaatttaagtagggactaatgttggaaacgcgcctatttatagggacctaaaacataattaacc 13324146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 47 - 128
Target Start/End: Complemental strand, 21135101 - 21135020
Alignment:
Q  47 gggaccaaaaatttaataaaatttaaataggaactaatgttgaaaatacgcctatttatagagacctaaaacataattaacc 128  Q
    |||| ||||||||||||||||||||| | || |||||||||||||| |||||||||||||| |||| |||||||||||||||    
T  21135101 gggatcaaaaatttaataaaatttaagttgggactaatgttgaaaacacgcctatttatagggaccaaaaacataattaacc 21135020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 47 - 128
Target Start/End: Complemental strand, 24451259 - 24451178
Alignment:
Q  47 gggaccaaaaatttaataaaatttaaataggaactaatgttgaaaatacgcctatttatagagacctaaaacataattaacc 128  Q
    |||| ||||||||||||||||||||| |||| |||||||||| ||| |||||||||||||| ||||||||| ||||||||||    
T  24451259 gggatcaaaaatttaataaaatttaagtagggactaatgttggaaacacgcctatttatagggacctaaaatataattaacc 24451178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 47 - 128
Target Start/End: Complemental strand, 39308357 - 39308276
Alignment:
Q  47 gggaccaaaaatttaataaaatttaaataggaactaatgttgaaaatacgcctatttatagagacctaaaacataattaacc 128  Q
    |||||||||||||||||||||||||| |||| ||||| |||||||| ||| |||||||||| ||||| ||||||||||||||    
T  39308357 gggaccaaaaatttaataaaatttaagtagggactaaggttgaaaacacgtctatttatagggaccttaaacataattaacc 39308276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 47 - 127
Target Start/End: Original strand, 24452614 - 24452694
Alignment:
Q  47 gggaccaaaaatttaataaaatttaaataggaactaatgttgaaaatacgcctatttatagagacctaaaacataattaac 127  Q
    ||||||||||| |||||||||||||| |||| |||||||||| ||| |||||||||||||| ||| |||||||||||||||    
T  24452614 gggaccaaaaaattaataaaatttaagtagggactaatgttggaaacacgcctatttatagggacttaaaacataattaac 24452694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 42 - 128
Target Start/End: Complemental strand, 21575594 - 21575508
Alignment:
Q  42 tgttagggaccaaaaatttaataaaatttaaataggaactaatgttgaaaatacgcctatttatagagacctaaaacataattaacc 128  Q
    |||| |||| ||||||||||||||||||||| ||||||||||||||| |||  || |||||||||  ||||||||||||||||||||    
T  21575594 tgttggggatcaaaaatttaataaaatttaagtaggaactaatgttggaaacgcgtctatttataaggacctaaaacataattaacc 21575508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 47 - 128
Target Start/End: Original strand, 37707237 - 37707318
Alignment:
Q  47 gggaccaaaaatttaataaaatttaaataggaactaatgttgaaaatacgcctatttatagagacctaaaacataattaacc 128  Q
    |||| ||||||||||||||||||||| |||| |||||||||| |||  ||||| ||||||| ||||||||||||||||||||    
T  37707237 gggatcaaaaatttaataaaatttaagtagggactaatgttggaaacgcgcctgtttatagggacctaaaacataattaacc 37707318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 47 - 128
Target Start/End: Complemental strand, 42816097 - 42816016
Alignment:
Q  47 gggaccaaaaatttaataaaatttaaataggaactaatgttgaaaatacgcctatttatagagacctaaaacataattaacc 128  Q
    |||||||||||||||||||||||||| |||| |||||||||| ||  |||| ||||||||| ||||| ||||||||||||||    
T  42816097 gggaccaaaaatttaataaaatttaagtagggactaatgttggaagcacgcgtatttatagggaccttaaacataattaacc 42816016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 52 - 128
Target Start/End: Complemental strand, 16472766 - 16472690
Alignment:
Q  52 caaaaatttaataaaatttaaataggaactaatgttgaaaatacgcctatttatagagacctaaaacataattaacc 128  Q
    ||||||||||||||||||||| |||| |||||||||| |||  ||||||||||||| ||||||||| ||||||||||    
T  16472766 caaaaatttaataaaatttaagtagggactaatgttggaaacgcgcctatttatagggacctaaaatataattaacc 16472690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 52 - 128
Target Start/End: Complemental strand, 16477337 - 16477261
Alignment:
Q  52 caaaaatttaataaaatttaaataggaactaatgttgaaaatacgcctatttatagagacctaaaacataattaacc 128  Q
    ||||||||||||||||||||| |||| |||||||||| |||  ||||||||||||| ||||||||| ||||||||||    
T  16477337 caaaaatttaataaaatttaagtagggactaatgttggaaacgcgcctatttatagggacctaaaatataattaacc 16477261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 48 - 136
Target Start/End: Original strand, 22959784 - 22959872
Alignment:
Q  48 ggaccaaaaatttaataaaatttaaataggaactaatgttgaaaatacgcctatttatagagacctaaaacataattaaccttatattt 136  Q
    |||| ||||||||| |||| ||||||||||||||||||||  ||| ||| |||||||||| ||||| |||||||||||||| |||||||    
T  22959784 ggactaaaaatttattaaattttaaataggaactaatgttagaaacacgtctatttatagggaccttaaacataattaaccctatattt 22959872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 49 - 128
Target Start/End: Original strand, 35864176 - 35864255
Alignment:
Q  49 gaccaaaaatttaataaaatttaaataggaactaatgttgaaaatacgcctatttatagagacctaaaacataattaacc 128  Q
    |||||||||||||||||||||||| ||||||||||| || |||  || ||||||||||| || |||||||||||||||||    
T  35864176 gaccaaaaatttaataaaatttaagtaggaactaatattaaaagcacacctatttatagggatctaaaacataattaacc 35864255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 53 - 126
Target Start/End: Complemental strand, 32243430 - 32243357
Alignment:
Q  53 aaaaatttaataaaatttaaataggaactaatgttgaaaatacgcctatttatagagacctaaaacataattaa 126  Q
    ||||||||||||||||||||||||| || ||||||||||   ||| ||||||||||||||| ||||||||||||    
T  32243430 aaaaatttaataaaatttaaatagggaccaatgttgaaagctcgcttatttatagagaccttaaacataattaa 32243357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 47 - 128
Target Start/End: Original strand, 39310633 - 39310714
Alignment:
Q  47 gggaccaaaaatttaataaaatttaaataggaactaatgttgaaaatacgcctatttatagagacctaaaacataattaacc 128  Q
    ||||||||||||| |||||||||||| |||||| ||||||||||||   |||||||| ||| ||||| ||||||||||||||    
T  39310633 gggaccaaaaattaaataaaatttaagtaggaattaatgttgaaaacgtgcctatttctagggaccttaaacataattaacc 39310714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 47 - 128
Target Start/End: Original strand, 42817221 - 42817302
Alignment:
Q  47 gggaccaaaaatttaataaaatttaaataggaactaatgttgaaaatacgcctatttatagagacctaaaacataattaacc 128  Q
    ||||| |||||||| ||||||| ||| |||| |||||||||| ||| |||||||||||||| ||||| ||||||||||||||    
T  42817221 gggacaaaaaatttcataaaatataagtagggactaatgttggaaacacgcctatttatagggaccttaaacataattaacc 42817302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 49 - 128
Target Start/End: Complemental strand, 41280264 - 41280185
Alignment:
Q  49 gaccaaaaatttaataaaatttaaataggaactaatgttgaaaatacgcctatttatagagacctaaaacataattaacc 128  Q
    |||||||||||||||||||||||| ||   |||||||||| |||  |||||||||||||  | |||||||||||||||||    
T  41280264 gaccaaaaatttaataaaatttaagtaaatactaatgttggaaacgcgcctatttataggaatctaaaacataattaacc 41280185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 50 - 128
Target Start/End: Complemental strand, 14835097 - 14835019
Alignment:
Q  50 accaaaaatttaataaaatttaaataggaactaatgttgaaaatacgcctatttatagagacctaaaacataattaacc 128  Q
    |||||||||||| |||||||||| |||| | |||| ||||||| |||| | ||||||  ||||| ||||||||||||||    
T  14835097 accaaaaatttattaaaatttaagtagggattaatattgaaaacacgcttgtttataaggaccttaaacataattaacc 14835019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 47 - 128
Target Start/End: Complemental strand, 45022043 - 45021962
Alignment:
Q  47 gggaccaaaaatttaataaaatttaaataggaactaatgttgaaaatacgcctatttatagagacctaaaacataattaacc 128  Q
    |||||||||||||||||||||||||   ||| |||||| ||| ||  || | ||||||||| ||||| ||||||||||||||    
T  45022043 gggaccaaaaatttaataaaatttaggaagggactaatattggaagcacacgtatttatagggacctgaaacataattaacc 45021962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 53 - 128
Target Start/End: Complemental strand, 3865441 - 3865366
Alignment:
Q  53 aaaaatttaataaaatttaaataggaactaatgttgaaaatacgcctatttatagagacctaaaacataattaacc 128  Q
    |||||||||||||||||||||| || || ||||||||||   ||| |||||||||  || | ||||||||||||||    
T  3865441 aaaaatttaataaaatttaaattgggaccaatgttgaaagctcgcttatttataggaactttaaacataattaacc 3865366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 91
Target Start/End: Original strand, 3866904 - 3866942
Alignment:
Q  53 aaaaatttaataaaatttaaataggaactaatgttgaaa 91  Q
    ||||||||||||||||||||||||| || ||||||||||    
T  3866904 aaaaatttaataaaatttaaatagggaccaatgttgaaa 3866942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 119
Target Start/End: Original strand, 16478620 - 16478690
Alignment:
Q  49 gaccaaaaatttaataaaatttaaataggaactaatgttgaaaatacgcctatttatagagacctaaaaca 119  Q
    |||||| ||||||||||||||||| |||| |||||||||  |||  ||||||||||||   ||||||||||    
T  16478620 gaccaataatttaataaaatttaagtagggactaatgttagaaacgcgcctatttataacaacctaaaaca 16478690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 95 - 128
Target Start/End: Complemental strand, 35862702 - 35862669
Alignment:
Q  95 cgcctatttatagagacctaaaacataattaacc 128  Q
    ||||||||||||| ||||||||||||||||||||    
T  35862702 cgcctatttatagggacctaaaacataattaacc 35862669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 43 - 128
Target Start/End: Complemental strand, 44893618 - 44893533
Alignment:
Q  43 gttagggaccaaaaatttaataaaatttaaataggaactaatgttgaaaatacgcctatttatagagacctaaaacataattaacc 128  Q
    ||||||||  |||||||||||||||||| |||| | || ||||||| ||   ||| ||||| ||| ||||| ||||||||||||||    
T  44893618 gttagggatgaaaaatttaataaaattttaatatggaccaatgttggaagctcgcttatttgtagggaccttaaacataattaacc 44893533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 62; Significance: 7e-27; HSPs: 14)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 47 - 128
Target Start/End: Complemental strand, 7852329 - 7852248
Alignment:
Q  47 gggaccaaaaatttaataaaatttaaataggaactaatgttgaaaatacgcctatttatagagacctaaaacataattaacc 128  Q
    |||||||||||||||||||||||||| |||| | |||||||||||| |||||||||||||| ||||||||||||||||||||    
T  7852329 gggaccaaaaatttaataaaatttaagtagggattaatgttgaaaacacgcctatttatagggacctaaaacataattaacc 7852248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 47 - 128
Target Start/End: Original strand, 7855403 - 7855484
Alignment:
Q  47 gggaccaaaaatttaataaaatttaaataggaactaatgttgaaaatacgcctatttatagagacctaaaacataattaacc 128  Q
    |||||||||||||||||||||||||| |||| |||||||||||||| |||||||||||||| ||| ||||||||||||||||    
T  7855403 gggaccaaaaatttaataaaatttaagtagggactaatgttgaaaacacgcctatttatagggacttaaaacataattaacc 7855484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 47 - 128
Target Start/End: Original strand, 17246595 - 17246676
Alignment:
Q  47 gggaccaaaaatttaataaaatttaaataggaactaatgttgaaaatacgcctatttatagagacctaaaacataattaacc 128  Q
    |||||||||||||||||||||||||| |||| |||| ||||  ||| |||||||||||||||||||||||||||||||||||    
T  17246595 gggaccaaaaatttaataaaatttaagtagggactattgttagaaacacgcctatttatagagacctaaaacataattaacc 17246676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 47 - 128
Target Start/End: Original strand, 15119355 - 15119436
Alignment:
Q  47 gggaccaaaaatttaataaaatttaaataggaactaatgttgaaaatacgcctatttatagagacctaaaacataattaacc 128  Q
    |||||||||||||||||||||||||| |||| |||||||||| ||| || ||||||||||| ||||| ||||||||||||||    
T  15119355 gggaccaaaaatttaataaaatttaagtagggactaatgttggaaacacacctatttatagggaccttaaacataattaacc 15119436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 47 - 127
Target Start/End: Original strand, 5080022 - 5080101
Alignment:
Q  47 gggaccaaaaatttaataaaatttaaataggaactaatgttgaaaatacgcctatttatagagacctaaaacataattaac 127  Q
    |||||||||||||||||||||||||||||||||||||| ||| ||| ||  |||||||||| |||||||||||||||||||    
T  5080022 gggaccaaaaatttaataaaatttaaataggaactaatattggaaacacatctatttatag-gacctaaaacataattaac 5080101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 50 - 127
Target Start/End: Original strand, 22972303 - 22972380
Alignment:
Q  50 accaaaaatttaataaaatttaaataggaactaatgttgaaaatacgcctatttatagagacctaaaacataattaac 127  Q
    ||||||||||||||||||| ||| |||| |||||| ||||||| |||||||||||||   ||||||||||||||||||    
T  22972303 accaaaaatttaataaaatataagtagggactaatattgaaaacacgcctatttataagaacctaaaacataattaac 22972380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 50 - 127
Target Start/End: Complemental strand, 23816095 - 23816018
Alignment:
Q  50 accaaaaatttaataaaatttaaataggaactaatgttgaaaatacgcctatttatagagacctaaaacataattaac 127  Q
    ||||||||||||||||||| ||| |||| |||||| ||||||| |||||||||||||   ||||||||||||||||||    
T  23816095 accaaaaatttaataaaatataagtagggactaatattgaaaacacgcctatttataagaacctaaaacataattaac 23816018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 53 - 128
Target Start/End: Complemental strand, 22971668 - 22971593
Alignment:
Q  53 aaaaatttaataaaatttaaataggaactaatgttgaaaatacgcctatttatagagacctaaaacataattaacc 128  Q
    |||||||||||||||||||| |||| ||| |||||| |||  ||||||||||||| || |||||||||||||||||    
T  22971668 aaaaatttaataaaatttaagtagggactgatgttggaaacgcgcctatttatagggatctaaaacataattaacc 22971593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 53 - 128
Target Start/End: Original strand, 23816730 - 23816805
Alignment:
Q  53 aaaaatttaataaaatttaaataggaactaatgttgaaaatacgcctatttatagagacctaaaacataattaacc 128  Q
    |||||||||||||||||||| |||| ||| |||||| |||  ||||||||||||| || |||||||||||||||||    
T  23816730 aaaaatttaataaaatttaagtagggactgatgttggaaacgcgcctatttatagggatctaaaacataattaacc 23816805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 54 - 126
Target Start/End: Original strand, 3335689 - 3335761
Alignment:
Q  54 aaaatttaataaaatttaaataggaactaatgttgaaaatacgcctatttatagagacctaaaacataattaa 126  Q
    ||||||||||||||||||  |||| | |||||||| ||| ||||||||||||||  ||||||| |||||||||    
T  3335689 aaaatttaataaaatttatgtagggagtaatgttggaaacacgcctatttataggaacctaaagcataattaa 3335761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 53 - 128
Target Start/End: Complemental strand, 3913013 - 3912938
Alignment:
Q  53 aaaaatttaataaaatttaaataggaactaatgttgaaaatacgcctatttatagagacctaaaacataattaacc 128  Q
    ||||||||||||||||||||||||| || ||| || ||||| ||| ||||| ||| || || ||||||||||||||    
T  3913013 aaaaatttaataaaatttaaatagggaccaatattaaaaatccgcttatttgtagggagcttaaacataattaacc 3912938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 53 - 128
Target Start/End: Original strand, 5086964 - 5087038
Alignment:
Q  53 aaaaatttaataaaatttaaataggaactaatgttgaaaatacgcctatttatagagacctaaaacataattaacc 128  Q
    ||||||||||||||||||||| ||| || ||||||| ||   ||| ||||||||| ||||| ||||||||||||||    
T  5086964 aaaaatttaataaaatttaaaaagg-acgaatgttggaagctcgcttatttatagggaccttaaacataattaacc 5087038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 47 - 106
Target Start/End: Complemental strand, 8230981 - 8230922
Alignment:
Q  47 gggaccaaaaatttaataaaatttaaataggaactaatgttgaaaatacgcctatttata 106  Q
    |||| ||||||||||||||||||||| ||||||  |||||| ||||  ||||||||||||    
T  8230981 gggatcaaaaatttaataaaatttaagtaggaaaaaatgttcaaaacgcgcctatttata 8230922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 47 - 76
Target Start/End: Original strand, 18503493 - 18503522
Alignment:
Q  47 gggaccaaaaatttaataaaatttaaatag 76  Q
    ||||||||||||||||||||||||||||||    
T  18503493 gggaccaaaaatttaataaaatttaaatag 18503522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 62; Significance: 7e-27; HSPs: 24)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 42 - 127
Target Start/End: Original strand, 42488177 - 42488262
Alignment:
Q  42 tgttagggaccaaaaatttaataaaatttaaataggaactaatgttgaaaatacgcctatttatagagacctaaaacataattaac 127  Q
    |||| |||||||||||||||||||||||||| ||||||||||||||||||| || ||||||| ||| |||||||||||||||||||    
T  42488177 tgttggggaccaaaaatttaataaaatttaagtaggaactaatgttgaaaacacacctatttttagggacctaaaacataattaac 42488262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 47 - 128
Target Start/End: Original strand, 20721735 - 20721816
Alignment:
Q  47 gggaccaaaaatttaataaaatttaaataggaactaatgttgaaaatacgcctatttatagagacctaaaacataattaacc 128  Q
    |||||||||||||||||||||||||| || | ||||||||||||||  ||||||||||||| ||||||||||||||||||||    
T  20721735 gggaccaaaaatttaataaaatttaagtatggactaatgttgaaaacgcgcctatttatagggacctaaaacataattaacc 20721816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 47 - 128
Target Start/End: Complemental strand, 23787401 - 23787320
Alignment:
Q  47 gggaccaaaaatttaataaaatttaaataggaactaatgttgaaaatacgcctatttatagagacctaaaacataattaacc 128  Q
    |||||||||||||||||||||||||| | || |||||||||| ||| |||||||||||||| ||||||||||||||||||||    
T  23787401 gggaccaaaaatttaataaaatttaagtggggactaatgttggaaacacgcctatttatagggacctaaaacataattaacc 23787320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 47 - 128
Target Start/End: Original strand, 18673326 - 18673408
Alignment:
Q  47 gggaccaaaaatttaataaaatttaaataggaactaatgttgaaaatacgcctatttatag-agacctaaaacataattaacc 128  Q
    ||||||||||||||||||||||||||||||| | |||||||| ||| |||||||||||||| | |||||||||||||||||||    
T  18673326 gggaccaaaaatttaataaaatttaaatagggattaatgttggaaacacgcctatttatagaaaacctaaaacataattaacc 18673408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 47 - 127
Target Start/End: Original strand, 20721062 - 20721142
Alignment:
Q  47 gggaccaaaaatttaataaaatttaaataggaactaatgttgaaaatacgcctatttatagagacctaaaacataattaac 127  Q
    |||||||||||||||||||||||||| |||| |||||||||  ||||  |||||||||||| |||||||||||||||||||    
T  20721062 gggaccaaaaatttaataaaatttaagtagggactaatgttagaaatgtgcctatttatagggacctaaaacataattaac 20721142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 48 - 128
Target Start/End: Original strand, 44494015 - 44494095
Alignment:
Q  48 ggaccaaaaatttaataaaatttaaataggaactaatgttgaaaatacgcctatttatagagacctaaaacataattaacc 128  Q
    ||||||||||||||||||||||||| |||| |||||||||| ||| ||||| |||||||  ||||||||||||||||||||    
T  44494015 ggaccaaaaatttaataaaatttaagtagggactaatgttggaaacacgccaatttataaggacctaaaacataattaacc 44494095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 53 - 128
Target Start/End: Original strand, 9112217 - 9112292
Alignment:
Q  53 aaaaatttaataaaatttaaataggaactaatgttgaaaatacgcctatttatagagacctaaaacataattaacc 128  Q
    |||||||||||||||||||||||||||| ||||||||||   ||| ||||||||||||||| ||||||||||||||    
T  9112217 aaaaatttaataaaatttaaataggaaccaatgttgaaagctcgcttatttatagagaccttaaacataattaacc 9112292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 47 - 130
Target Start/End: Original strand, 33001376 - 33001459
Alignment:
Q  47 gggaccaaaaatttaataaaatttaaataggaactaatgttgaaaatacgcctatttatagagacctaaaacataattaacctt 130  Q
    |||| |||||||||||||||||||||  ||| |||||||||| ||| ||| |||||||||| ||||||||||||||||||||||    
T  33001376 gggatcaaaaatttaataaaatttaagcagggactaatgttggaaacacgtctatttatagggacctaaaacataattaacctt 33001459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 53 - 126
Target Start/End: Complemental strand, 3104766 - 3104693
Alignment:
Q  53 aaaaatttaataaaatttaaataggaactaatgttgaaaatacgcctatttatagagacctaaaacataattaa 126  Q
    |||||||||||||||||||| || |||||||||||| ||| |||| ||||||||| ||||||||||||||||||    
T  3104766 aaaaatttaataaaatttaagtatgaactaatgttggaaacacgcttatttatagggacctaaaacataattaa 3104693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 47 - 128
Target Start/End: Complemental strand, 43931921 - 43931840
Alignment:
Q  47 gggaccaaaaatttaataaaatttaaataggaactaatgttgaaaatacgcctatttatagagacctaaaacataattaacc 128  Q
    |||||||||||||||||||||||||| |||  |||||| ||||||| ||  |||||||||| ||||||||||||||||||||    
T  43931921 gggaccaaaaatttaataaaatttaagtagagactaatattgaaaacaccgctatttatagggacctaaaacataattaacc 43931840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 47 - 119
Target Start/End: Complemental strand, 38276123 - 38276051
Alignment:
Q  47 gggaccaaaaatttaataaaatttaaataggaactaatgttgaaaatacgcctatttatagagacctaaaaca 119  Q
    |||||||||||||||||||||||||  |||  |||||||||| |||||||||||||||||| |||||||||||    
T  38276123 gggaccaaaaatttaataaaatttatgtagagactaatgttggaaatacgcctatttatagggacctaaaaca 38276051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 49 - 128
Target Start/End: Complemental strand, 1373343 - 1373264
Alignment:
Q  49 gaccaaaaatttaataaaatttaaataggaactaatgttgaaaatacgcctatttatagagacctaaaacataattaacc 128  Q
    |||||||||||||||||||||||  |||| |||||||||| ||| | |||||||||||| ||||||||||||||| ||||    
T  1373343 gaccaaaaatttaataaaatttatgtagggactaatgttggaaacatgcctatttatagggacctaaaacataatcaacc 1373264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 53 - 128
Target Start/End: Original strand, 1373721 - 1373795
Alignment:
Q  53 aaaaatttaataaaatttaaataggaactaatgttgaaaatacgcctatttatagagacctaaaacataattaacc 128  Q
    |||||||||||||||||||| |||| |||||||||| ||| ||| ||||||||||| |||||||||||||||||||    
T  1373721 aaaaatttaataaaatttaagtagggactaatgttggaaacacgtctatttataga-acctaaaacataattaacc 1373795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 47 - 128
Target Start/End: Complemental strand, 21439077 - 21438996
Alignment:
Q  47 gggaccaaaaatttaataaaatttaaataggaactaatgttgaaaatacgcctatttatagagacctaaaacataattaacc 128  Q
    |||||||||||||||||||||||||| ||   |||||||||| |||  ||||||||||||| || |||||||||||||||||    
T  21439077 gggaccaaaaatttaataaaatttaagtatagactaatgttggaaacgcgcctatttatagggatctaaaacataattaacc 21438996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 56 - 128
Target Start/End: Original strand, 43933257 - 43933329
Alignment:
Q  56 aatttaataaaatttaaataggaactaatgttgaaaatacgcctatttatagagacctaaaacataattaacc 128  Q
    ||||||||||||||||| |||  |||||||||||||| |||||||||||||  ||||||||| ||||||||||    
T  43933257 aatttaataaaatttaagtagagactaatgttgaaaacacgcctatttatacggacctaaaaaataattaacc 43933329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 55 - 128
Target Start/End: Complemental strand, 44492654 - 44492581
Alignment:
Q  55 aaatttaataaaatttaaataggaactaatgttgaaaatacgcctatttatagagacctaaaacataattaacc 128  Q
    |||||||||||||||||| || | | |||||||| |||  ||||||||||||| ||||||||||||||||||||    
T  44492654 aaatttaataaaatttaagtatggattaatgttggaaacgcgcctatttatagggacctaaaacataattaacc 44492581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 47 - 107
Target Start/End: Complemental strand, 33000752 - 33000692
Alignment:
Q  47 gggaccaaaaatttaataaaatttaaataggaactaatgttgaaaatacgcctatttatag 107  Q
    |||||||||||||||||||||||||| |||||||||| |||| |||  |||||||||||||    
T  33000752 gggaccaaaaatttaataaaatttaagtaggaactaacgttggaaacgcgcctatttatag 33000692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 47 - 117
Target Start/End: Original strand, 20719551 - 20719621
Alignment:
Q  47 gggaccaaaaatttaataaaatttaaataggaactaatgttgaaaatacgcctatttatagagacctaaaa 117  Q
    |||| ||||||| ||||||||||||| |||| |||||||||| |||  ||||||||||||| |||||||||    
T  20719551 gggatcaaaaatgtaataaaatttaagtagggactaatgttggaaacgcgcctatttatagggacctaaaa 20719621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 47 - 128
Target Start/End: Original strand, 23788058 - 23788139
Alignment:
Q  47 gggaccaaaaatttaataaaatttaaataggaactaatgttgaaaatacgcctatttatagagacctaaaacataattaacc 128  Q
    |||| ||||||||||||||||||||  || ||| |||||||| |||||||||||||||| || || ||  ||||||||||||    
T  23788058 gggatcaaaaatttaataaaatttatgtaagaattaatgttggaaatacgcctatttattgatacttacgacataattaacc 23788139  T

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Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 47 - 108
Target Start/End: Complemental strand, 42486833 - 42486772
Alignment:
Q  47 gggaccaaaaatttaataaaatttaaataggaactaatgttgaaaatacgcctatttataga 108  Q
    |||||||||||||||||||||||||| || | |||||||||| |||  ||||||||||||||    
T  42486833 gggaccaaaaatttaataaaatttaagtatggactaatgttggaaacgcgcctatttataga 42486772  T

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Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 64 - 128
Target Start/End: Original strand, 3105939 - 3106003
Alignment:
Q  64 aaaatttaaataggaactaatgttgaaaatacgcctatttatagagacctaaaacataattaacc 128  Q
    ||||||||| |||| |||||||||| |||  | ||||||||||| ||||||||||||||||||||    
T  3105939 aaaatttaagtagggactaatgttggaaacgcacctatttatagggacctaaaacataattaacc 3106003  T

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Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 53 - 128
Target Start/End: Complemental strand, 32317965 - 32317890
Alignment:
Q  53 aaaaatttaataaaatttaaataggaactaatgttgaaaatacgcctatttatagagacctaaaacataattaacc 128  Q
    |||||||||||||||||||||||||||| ||||||| ||   ||| ||||||||| ||| | |||| |||||||||    
T  32317965 aaaaatttaataaaatttaaataggaaccaatgttggaagctcgcttatttatagggactttaaacctaattaacc 32317890  T

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Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 86
Target Start/End: Original strand, 21440329 - 21440367
Alignment:
Q  48 ggaccaaaaatttaataaaatttaaataggaactaatgt 86  Q
    ||||||||||| ||||||||| |||||||||||||||||    
T  21440329 ggaccaaaaatgtaataaaatctaaataggaactaatgt 21440367  T

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Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 127
Target Start/End: Complemental strand, 9190136 - 9190056
Alignment:
Q  47 gggaccaaaaatttaataaaatttaaataggaactaatgttgaaaatacgcctatttatagagacctaaaacataattaac 127  Q
    |||||||||| |||| |||||||||| || | |||||||||  |||   | ||||||| |||||||| |||||||||||||    
T  9190136 gggaccaaaagtttattaaaatttaagtatggactaatgttagaaacgagactatttacagagaccttaaacataattaac 9190056  T

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Target: scaffold0093 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0093
Description:

Target: scaffold0093; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 49 - 128
Target Start/End: Original strand, 49272 - 49351
Alignment:
Q  49 gaccaaaaatttaataaaatttaaataggaactaatgttgaaaatacgcctatttatagagacctaaaacataattaacc 128  Q
    |||||||||||||||||||||||| |||| |||||||||| ||| |||||||||||||| ||||||||||||||||||||    
T  49272 gaccaaaaatttaataaaatttaagtagggactaatgttggaaacacgcctatttatagggacctaaaacataattaacc 49351  T

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Target: scaffold0097 (Bit Score: 58; Significance: 2e-24; HSPs: 3)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 47 - 128
Target Start/End: Original strand, 25564 - 25645
Alignment:
Q  47 gggaccaaaaatttaataaaatttaaataggaactaatgttgaaaatacgcctatttatagagacctaaaacataattaacc 128  Q
    |||||||||||||||||||||||||| || | ||||||||||||||  ||||||||||||| ||||||||||||||||||||    
T  25564 gggaccaaaaatttaataaaatttaagtatggactaatgttgaaaacgcgcctatttatagggacctaaaacataattaacc 25645  T

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Target: scaffold0097; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 47 - 117
Target Start/End: Original strand, 23389 - 23459
Alignment:
Q  47 gggaccaaaaatttaataaaatttaaataggaactaatgttgaaaatacgcctatttatagagacctaaaa 117  Q
    |||| ||||||| ||||||||||||| |||| |||||||||| |||  ||||||||||||| |||||||||    
T  23389 gggatcaaaaatgtaataaaatttaagtagggactaatgttggaaacgcgcctatttatagggacctaaaa 23459  T

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Target: scaffold0097; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 64 - 127
Target Start/End: Original strand, 24907 - 24970
Alignment:
Q  64 aaaatttaaataggaactaatgttgaaaatacgcctatttatagagacctaaaacataattaac 127  Q
    ||||||||| |||| |||||||||  ||||  |||||||||||| |||||||||||||||||||    
T  24907 aaaatttaagtagggactaatgttagaaatgtgcctatttatagggacctaaaacataattaac 24970  T

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Target: scaffold0385 (Bit Score: 57; Significance: 7e-24; HSPs: 1)
Name: scaffold0385
Description:

Target: scaffold0385; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 47 - 131
Target Start/End: Original strand, 10464 - 10548
Alignment:
Q  47 gggaccaaaaatttaataaaatttaaataggaactaatgttgaaaatacgcctatttatagagacctaaaacataattaacctta 131  Q
    |||||||||||||||||||||||||| |||  |||||| || ||||| || ||||||||||||||||||||||||||||||||||    
T  10464 gggaccaaaaatttaataaaatttaagtagagactaatattaaaaatgcgtctatttatagagacctaaaacataattaacctta 10548  T

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Target: scaffold0651 (Bit Score: 54; Significance: 4e-22; HSPs: 2)
Name: scaffold0651
Description:

Target: scaffold0651; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 47 - 128
Target Start/End: Complemental strand, 5601 - 5520
Alignment:
Q  47 gggaccaaaaatttaataaaatttaaataggaactaatgttgaaaatacgcctatttatagagacctaaaacataattaacc 128  Q
    |||||||||||||||||||||||||| |||| |||||||||  |||  ||||||||||||| ||||||||||||||||||||    
T  5601 gggaccaaaaatttaataaaatttaagtagggactaatgttagaaacgcgcctatttatagggacctaaaacataattaacc 5520  T

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Target: scaffold0651; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 53 - 124
Target Start/End: Original strand, 7384 - 7455
Alignment:
Q  53 aaaaatttaataaaatttaaataggaactaatgttgaaaatacgcctatttatagagacctaaaacataatt 124  Q
    |||||||||||||||||||| |||| |||||||||| |||  | ||||||||||  || |||||||||||||    
T  7384 aaaaatttaataaaatttaagtagggactaatgttggaaacgcacctatttataaggatctaaaacataatt 7455  T

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Target: scaffold0148 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 47 - 123
Target Start/End: Original strand, 38894 - 38970
Alignment:
Q  47 gggaccaaaaatttaataaaatttaaataggaactaatgttgaaaatacgcctatttatagagacctaaaacataat 123  Q
    |||| ||||||||||||||||||||  ||||||||||||||||||| | |||||||||||||||||||||| |||||    
T  38894 gggatcaaaaatttaataaaatttatgtaggaactaatgttgaaaacatgcctatttatagagacctaaaatataat 38970  T

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Target: scaffold0148; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 54 - 128
Target Start/End: Complemental strand, 34747 - 34673
Alignment:
Q  54 aaaatttaataaaatttaaataggaactaatgttgaaaatacgcctatttatagagacctaaaacataattaacc 128  Q
    |||| |||||| ||||||| |||| | |||||||||||| || ||||||||||||||||||||| ||||||||||    
T  34747 aaaaattaatacaatttaagtagggattaatgttgaaaacacacctatttatagagacctaaaatataattaacc 34673  T

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Target: scaffold0003 (Bit Score: 46; Significance: 2e-17; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 47 - 128
Target Start/End: Complemental strand, 239288 - 239207
Alignment:
Q  47 gggaccaaaaatttaataaaatttaaataggaactaatgttgaaaatacgcctatttatagagacctaaaacataattaacc 128  Q
    ||||||||||||| |||||||||||  |||| |||||||||| |||  | ||||||||||| ||||||||||||||||||||    
T  239288 gggaccaaaaattgaataaaatttaggtagggactaatgttggaaacgcacctatttatagggacctaaaacataattaacc 239207  T

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Target: scaffold0003; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 87
Target Start/End: Original strand, 240513 - 240553
Alignment:
Q  47 gggaccaaaaatttaataaaatttaaataggaactaatgtt 87  Q
    |||||||||||||||||||||||||| ||  ||||||||||    
T  240513 gggaccaaaaatttaataaaatttaagtaaaaactaatgtt 240553  T

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Target: scaffold0287 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0287
Description:

Target: scaffold0287; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 49 - 130
Target Start/End: Original strand, 237 - 318
Alignment:
Q  49 gaccaaaaatttaataaaatttaaataggaactaatgttgaaaatacgcctatttatagagacctaaaacataattaacctt 130  Q
    |||||||||| ||||||||||||| |||   |||||||||||||  ||||||||||| |  |||||||||||||||||||||    
T  237 gaccaaaaatataataaaatttaagtagaggctaatgttgaaaacgcgcctatttattggaacctaaaacataattaacctt 318  T

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Target: scaffold0005 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 53 - 133
Target Start/End: Complemental strand, 282687 - 282607
Alignment:
Q  53 aaaaatttaataaaatttaaataggaactaatgttgaaaatacgcctatttatagagacctaaaacataattaaccttata 133  Q
    ||||||||||||||||||||||||| || ||||||| |||  ||| ||||||||| ||| | |||||||||||||| ||||    
T  282687 aaaaatttaataaaatttaaatagggaccaatgttggaaactcgcttatttatagggactttaaacataattaaccctata 282607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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