View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11929_high_9 (Length: 370)
Name: NF11929_high_9
Description: NF11929
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11929_high_9 |
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Alignment Details
Target: chr2 (Bit Score: 252; Significance: 1e-140; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 252; E-Value: 1e-140
Query Start/End: Original strand, 15 - 353
Target Start/End: Original strand, 36541537 - 36541879
Alignment:
| Q |
15 |
aagaaataaacaatattcaacacatacataacagaaaactgacatcgtcaaatacaaagttactaaaaagaaatttgactataacccatggatttccttc |
114 |
Q |
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| T |
36541537 |
aagaaataaacaatattcaacacatacataacagaaaactgacatcgtcaaagacaaagttactaaaaagaaaattgactataacccatgaatttcctcc |
36541636 |
T |
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| Q |
115 |
tatgcaacatttcttttacatcactagttggacgtaccatcacccaa---gttgtggatatttccttgtttccaaattattgaaaaccaattgctcatct |
211 |
Q |
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| T |
36541637 |
tatgcaacatttcttttacgtctctagttggacgtaccatcacccaagtcgttgtggatatttccttaattccaaattattgaaaaccacttgctcatct |
36541736 |
T |
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| Q |
212 |
tgagatcttagagtgatttcacatagctccatgtttattgttgtcgtgacagttat-nnnnnnnttagttccaaaatgaaggggtgcttctgcatcttca |
310 |
Q |
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| T |
36541737 |
tgagatcttagagtgatttcacatagctccatgtttattgttgtcgtgacagttataaaaaaaattagttccaaaatgaaggggtgcttctacatcttca |
36541836 |
T |
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| Q |
311 |
tccatatcaagaattaggatgtcgcatgaaaccagagatcaac |
353 |
Q |
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| T |
36541837 |
tccatatcaagaattaggatgtcgcagaaaaccagagatcaac |
36541879 |
T |
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