View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11930_high_110 (Length: 263)
Name: NF11930_high_110
Description: NF11930
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11930_high_110 |
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Alignment Details
Target: chr1 (Bit Score: 226; Significance: 1e-124; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 18 - 247
Target Start/End: Original strand, 45133048 - 45133277
Alignment:
| Q |
18 |
aagtaaaagtgatcagccaaaattaccacaacagaaaatctagaatcagtaaataactaattaccatccccaagtatagcagtcttgaaaaaatgatgca |
117 |
Q |
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| T |
45133048 |
aagtaaaagtgatcagccaaaattaccacaacagaaaatctagaatcagtaaataactaattaccatccccaagtatagcagtcttgaaaaaatgatgca |
45133147 |
T |
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| Q |
118 |
tatccaatgcatgactttgtgattttatacattcttcatgattatgaaacatccgctcttcggcaattgcatcaggatgaagatgtttccctttaaaaga |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
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| T |
45133148 |
tatccaatgcatgactttgtgattttatacattcttcatgattatgaaacatccgctcttcggcaattgcatcaggatgaagatatttccctttaaaaga |
45133247 |
T |
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| Q |
218 |
actagtctccaggctgtccttatttttcat |
247 |
Q |
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|||||||||||||||||||||||||||||| |
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| T |
45133248 |
actagtctccaggctgtccttatttttcat |
45133277 |
T |
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