View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11930_high_112 (Length: 259)
Name: NF11930_high_112
Description: NF11930
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11930_high_112 |
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Alignment Details
Target: chr2 (Bit Score: 235; Significance: 1e-130; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 1 - 239
Target Start/End: Complemental strand, 8568394 - 8568156
Alignment:
| Q |
1 |
cagaactaagagtgtcattgagtgcccaaaacaaaggtggtcctgcaagataacatgttagacatattcccataatccaaaacaaaactttgaatgctct |
100 |
Q |
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| T |
8568394 |
cagaactaagagtgtcattgagtgcccaaaacaaaggtggtcctgcaagataacatgttagacatattcccataatccaaaacaaaactttgaatgctct |
8568295 |
T |
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| Q |
101 |
ttgctgcctcctattcatttttatctggattcagcagcaaattattggggaaataattaagaggatcttgatgattttgagttggttaaggttattcagt |
200 |
Q |
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| T |
8568294 |
ttgctgcctcctattcatttttttctggattcagcagcaaattattggggaaataattaagaggatcttgatgattttgagttggttaaggttattcagt |
8568195 |
T |
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| Q |
201 |
ttcaagatttgcgtatctctctcactctcacctttcacc |
239 |
Q |
| |
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||||||||||||||||||||||||||||||||||||||| |
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| T |
8568194 |
ttcaagatttgcgtatctctctcactctcacctttcacc |
8568156 |
T |
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