View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11930_low_11 (Length: 724)

Name: NF11930_low_11
Description: NF11930
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11930_low_11
NF11930_low_11
[»] chr5 (29 HSPs)
chr5 (271-447)||(32891198-32891375)
chr5 (274-447)||(37093912-37094086)
chr5 (271-447)||(4391843-4392020)
chr5 (271-447)||(8692532-8692709)
chr5 (271-447)||(3456776-3456950)
chr5 (97-230)||(33338243-33338375)
chr5 (272-447)||(34286618-34286793)
chr5 (272-447)||(228047-228223)
chr5 (74-230)||(11680190-11680343)
chr5 (99-223)||(28273373-28273497)
chr5 (292-391)||(40925916-40926015)
chr5 (90-266)||(5108401-5108572)
chr5 (92-227)||(24397457-24397590)
chr5 (272-416)||(5481408-5481552)
chr5 (325-439)||(29223497-29223610)
chr5 (329-434)||(38614236-38614342)
chr5 (329-447)||(11739275-11739394)
chr5 (95-223)||(8213016-8213143)
chr5 (316-391)||(6614289-6614364)
chr5 (311-433)||(41326486-41326609)
chr5 (96-187)||(41530402-41530493)
chr5 (272-345)||(42148957-42149030)
chr5 (308-447)||(35672345-35672484)
chr5 (288-369)||(31644729-31644812)
chr5 (299-425)||(28434248-28434374)
chr5 (271-316)||(43141518-43141563)
chr5 (96-148)||(19804515-19804567)
chr5 (276-318)||(228027-228069)
chr5 (395-447)||(31644662-31644715)
[»] chr2 (32 HSPs)
chr2 (271-447)||(13686017-13686194)
chr2 (273-447)||(19898943-19899118)
chr2 (268-447)||(14940982-14941163)
chr2 (276-447)||(41464902-41465074)
chr2 (271-447)||(25414937-25415114)
chr2 (74-232)||(9991420-9991578)
chr2 (271-439)||(28429313-28429479)
chr2 (289-447)||(3810285-3810444)
chr2 (273-447)||(42263855-42264030)
chr2 (270-447)||(45093146-45093320)
chr2 (272-391)||(28716316-28716435)
chr2 (97-226)||(41464262-41464391)
chr2 (272-447)||(35323474-35323650)
chr2 (271-447)||(35676269-35676452)
chr2 (93-229)||(32354728-32354864)
chr2 (74-228)||(6084681-6084836)
chr2 (122-228)||(3095067-3095173)
chr2 (126-231)||(36402436-36402541)
chr2 (91-216)||(40356405-40356529)
chr2 (268-399)||(36690814-36690946)
chr2 (330-447)||(29689277-29689392)
chr2 (98-171)||(18904248-18904321)
chr2 (332-447)||(2752692-2752808)
chr2 (272-447)||(16058375-16058548)
chr2 (272-317)||(2752614-2752659)
chr2 (293-369)||(40126520-40126596)
chr2 (98-148)||(5711181-5711231)
chr2 (272-313)||(24413862-24413903)
chr2 (276-318)||(13685997-13686039)
chr2 (371-444)||(28716437-28716511)
chr2 (363-447)||(23454350-23454436)
chr2 (73-150)||(39085771-39085848)
[»] chr3 (26 HSPs)
chr3 (272-447)||(521763-521939)
chr3 (271-447)||(23642977-23643154)
chr3 (271-447)||(36517538-36517715)
chr3 (274-447)||(45166250-45166424)
chr3 (271-447)||(31788329-31788506)
chr3 (271-447)||(50612872-50613049)
chr3 (274-439)||(38176390-38176556)
chr3 (301-447)||(1561283-1561430)
chr3 (92-229)||(38611332-38611469)
chr3 (271-439)||(39145283-39145452)
chr3 (74-222)||(46055753-46055901)
chr3 (272-447)||(52546766-52546942)
chr3 (112-226)||(38014655-38014769)
chr3 (289-447)||(20912191-20912350)
chr3 (272-439)||(34624486-34624643)
chr3 (100-216)||(36473310-36473426)
chr3 (271-433)||(51297021-51297186)
chr3 (98-230)||(20499306-20499437)
chr3 (92-185)||(52313461-52313553)
chr3 (328-391)||(22650450-22650513)
chr3 (328-434)||(9496567-9496674)
chr3 (648-708)||(51941370-51941431)
chr3 (98-194)||(21195283-21195379)
chr3 (171-223)||(24980126-24980178)
chr3 (97-217)||(32734503-32734623)
chr3 (276-318)||(50613027-50613069)
[»] chr4 (32 HSPs)
chr4 (273-447)||(37674000-37674175)
chr4 (272-447)||(41633241-41633416)
chr4 (273-447)||(24683100-24683275)
chr4 (271-447)||(18375389-18375565)
chr4 (74-234)||(16559974-16560136)
chr4 (272-414)||(54358170-54358312)
chr4 (92-232)||(31463291-31463431)
chr4 (94-231)||(54400182-54400317)
chr4 (78-232)||(19934449-19934603)
chr4 (272-447)||(23348112-23348291)
chr4 (271-391)||(17847540-17847660)
chr4 (92-232)||(22665653-22665793)
chr4 (271-413)||(4512160-4512303)
chr4 (273-396)||(41878592-41878715)
chr4 (96-232)||(51581458-51581595)
chr4 (99-231)||(27628837-27628969)
chr4 (99-227)||(2804325-2804451)
chr4 (301-447)||(26179238-26179385)
chr4 (99-199)||(33894078-33894178)
chr4 (272-425)||(47838942-47839094)
chr4 (95-223)||(26805681-26805809)
chr4 (272-419)||(54021241-54021391)
chr4 (329-447)||(47281588-47281711)
chr4 (96-193)||(29533537-29533632)
chr4 (163-227)||(49482972-49483036)
chr4 (272-355)||(41497890-41497975)
chr4 (100-220)||(54357728-54357848)
chr4 (270-314)||(52726030-52726074)
chr4 (99-196)||(7031615-7031710)
chr4 (274-307)||(47282226-47282259)
chr4 (276-318)||(24683080-24683122)
chr4 (387-447)||(41878345-41878406)
[»] chr1 (39 HSPs)
chr1 (271-447)||(1270195-1270372)
chr1 (268-447)||(34475923-34476103)
chr1 (270-439)||(31032694-31032864)
chr1 (281-447)||(29095530-29095697)
chr1 (92-231)||(48033873-48034012)
chr1 (271-439)||(16254886-16255055)
chr1 (273-425)||(47550838-47550990)
chr1 (275-447)||(9098571-9098741)
chr1 (71-232)||(39873293-39873455)
chr1 (271-447)||(20808971-20809148)
chr1 (97-232)||(2351223-2351358)
chr1 (97-228)||(4551040-4551171)
chr1 (96-230)||(37275260-37275394)
chr1 (271-447)||(45010224-45010400)
chr1 (72-217)||(38680882-38681027)
chr1 (271-447)||(42480145-42480324)
chr1 (96-223)||(30111750-30111877)
chr1 (99-233)||(3077048-3077182)
chr1 (332-447)||(24135779-24135893)
chr1 (96-242)||(15177023-15177169)
chr1 (287-416)||(2958710-2958834)
chr1 (74-211)||(12482354-12482490)
chr1 (272-425)||(44714807-44714960)
chr1 (74-230)||(26060163-26060322)
chr1 (271-379)||(4624438-4624539)
chr1 (274-447)||(34807960-34808134)
chr1 (275-343)||(41647356-41647424)
chr1 (105-189)||(32512083-32512167)
chr1 (96-243)||(8903930-8904075)
chr1 (98-211)||(4081205-4081318)
chr1 (99-227)||(21029295-21029421)
chr1 (159-230)||(16109874-16109945)
chr1 (318-413)||(27143603-27143698)
chr1 (347-447)||(4194790-4194891)
chr1 (160-223)||(46065316-46065379)
chr1 (276-318)||(1270175-1270217)
chr1 (276-318)||(4194770-4194812)
chr1 (276-318)||(20808951-20808993)
chr1 (276-318)||(34475903-34475945)
[»] chr7 (20 HSPs)
chr7 (269-447)||(23991946-23992125)
chr7 (97-232)||(39321141-39321278)
chr7 (73-228)||(3408166-3408321)
chr7 (95-232)||(16492022-16492159)
chr7 (74-229)||(44207609-44207765)
chr7 (293-447)||(27425773-27425928)
chr7 (93-233)||(10980913-10981053)
chr7 (309-447)||(17611866-17612005)
chr7 (95-232)||(36856516-36856653)
chr7 (92-223)||(45174491-45174622)
chr7 (271-412)||(42195437-42195578)
chr7 (329-447)||(22326882-22327001)
chr7 (74-208)||(675089-675222)
chr7 (92-223)||(35729427-35729560)
chr7 (271-413)||(8307584-8307724)
chr7 (99-227)||(5787235-5787363)
chr7 (648-715)||(44569539-44569606)
chr7 (272-425)||(25686412-25686563)
chr7 (511-558)||(44569400-44569447)
chr7 (104-184)||(24620778-24620858)
[»] chr8 (30 HSPs)
chr8 (272-447)||(36473048-36473224)
chr8 (272-447)||(41322553-41322729)
chr8 (272-399)||(15561913-15562040)
chr8 (91-227)||(36054979-36055115)
chr8 (272-447)||(39112672-39112848)
chr8 (271-447)||(29314023-29314200)
chr8 (274-447)||(11653712-11653889)
chr8 (92-227)||(10635965-10636100)
chr8 (95-230)||(24286469-24286604)
chr8 (268-374)||(33888946-33889052)
chr8 (98-228)||(44159316-44159446)
chr8 (271-439)||(2001680-2001848)
chr8 (95-232)||(40451881-40452018)
chr8 (271-447)||(34392132-34392300)
chr8 (103-223)||(31452052-31452171)
chr8 (325-447)||(4851757-4851880)
chr8 (272-352)||(37919508-37919588)
chr8 (271-425)||(1005636-1005793)
chr8 (336-447)||(8551513-8551625)
chr8 (97-223)||(28280397-28280523)
chr8 (271-318)||(4824296-4824343)
chr8 (332-425)||(11643330-11643423)
chr8 (351-433)||(4794159-4794242)
chr8 (270-309)||(13357627-13357666)
chr8 (265-320)||(8551625-8551683)
chr8 (337-413)||(37919603-37919679)
chr8 (276-318)||(4851737-4851779)
chr8 (276-318)||(34392112-34392154)
chr8 (272-305)||(1416048-1416081)
chr8 (116-153)||(3744324-3744361)
[»] chr6 (11 HSPs)
chr6 (272-447)||(7646773-7646949)
chr6 (286-447)||(25935532-25935694)
chr6 (93-222)||(6614878-6615007)
chr6 (92-225)||(22616846-22616977)
chr6 (299-413)||(29487541-29487655)
chr6 (336-439)||(12607123-12607227)
chr6 (93-223)||(31765774-31765904)
chr6 (272-364)||(17366930-17367016)
chr6 (272-348)||(12607030-12607107)
chr6 (95-230)||(28541929-28542064)
chr6 (329-368)||(28898438-28898477)
[»] scaffold0002 (1 HSPs)
scaffold0002 (273-447)||(492690-492865)
[»] scaffold0132 (2 HSPs)
scaffold0132 (365-447)||(560-642)
scaffold0132 (365-447)||(8520-8602)
[»] scaffold0339 (1 HSPs)
scaffold0339 (271-322)||(13393-13443)


Alignment Details
Target: chr5 (Bit Score: 126; Significance: 1e-64; HSPs: 29)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 271 - 447
Target Start/End: Complemental strand, 32891375 - 32891198
Alignment:
Q  271 aggaaaatgctatttctctagaaaaatagcatcaagaatttttcaagacacatttgacaagttttaattgcatgatttatttgttgacttcctatttttt 370  Q
    ||||||||||||||| ||||||||||||||||||| |||||||||||||||| ||||||| |||||||||||||||||||||||| ||||||||| ||||    
T  32891375 aggaaaatgctatttatctagaaaaatagcatcaacaatttttcaagacacagttgacaaattttaattgcatgatttatttgttcacttcctatctttt 32891276  T
Q  371 agccacacctccttgaattgtagcaaatagtacattgtgattggttgctcttta-tcttgaagaattcttcatgttat 447  Q
    ||||||||||||||||||||| ||||||||| |||||||||||| |||| |||| ||||||||||||||| |||||||    
T  32891275 agccacacctccttgaattgtggcaaatagtgcattgtgattggctgctttttattcttgaagaattcttgatgttat 32891198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 115; E-Value: 5e-58
Query Start/End: Original strand, 274 - 447
Target Start/End: Original strand, 37093912 - 37094086
Alignment:
Q  274 aaaatgctatttctctagaaaaatagcatcaagaatttttcaagacacatttgacaagttttaattgcatgatttatttgttgacttcctattttttagc 373  Q
    |||||| ||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||| ||||||||||||| ||     
T  37093912 aaaatgttatttttctagaaaaatagcatcaagaatttttcaagacacagttgacaagttttaattgcataatttatttgttcacttcctatttttcagt 37094011  T
Q  374 cacacctccttgaattgtagcaaatagtacattgtgattggttgctcttta-tcttgaagaattcttcatgttat 447  Q
    |||||||||||||||||| |||||||||||| ||||||||  ||||||||| |||||||||||| || |||||||    
T  37094012 cacacctccttgaattgttgcaaatagtacaatgtgattgactgctctttattcttgaagaattgttgatgttat 37094086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 271 - 447
Target Start/End: Original strand, 4391843 - 4392020
Alignment:
Q  271 aggaaaatgctatttctctagaaaaatagcatcaagaatttttcaagacacatttgacaagttttaattgcatgatttatttgttgacttcctatttttt 370  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||  || |||||||||||||||| ||||||||||| |||||||||||||     
T  4391843 aggaaaatgcaatttctctagaaaaatagcatcaagaatttttcaagacacagctggcaagttttaattgcataatttatttgttcacttcctatttttc 4391942  T
Q  371 agccacacctccttgaattgtagcaaatagtacattgtgattggttgctcttta-tcttgaagaattcttcatgttat 447  Q
    ||||||| ||||||||||||| ||||| ||| |||||| ||||| ||||||||| ||||||||||||||| |||||||    
T  4391943 agccacagctccttgaattgtggcaaacagtgcattgtaattggctgctctttattcttgaagaattcttgatgttat 4392020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 271 - 447
Target Start/End: Complemental strand, 8692709 - 8692532
Alignment:
Q  271 aggaaaatgctatttctctagaaaaatagcatcaagaatttttcaagacacatttgacaagttttaattgcatgatttatttgttgacttcctatttttt 370  Q
    ||||||||| |||||||||| |||||||||||||||||| ||||||||||||  |||||| ||||||||||||||||||||| || |||| ||||||||     
T  8692709 aggaaaatgttatttctctaaaaaaatagcatcaagaatctttcaagacacagctgacaaattttaattgcatgatttatttattcactttctatttttc 8692610  T
Q  371 agccacacctccttgaattgtagcaaatagtacattgtgattggttgctcttta-tcttgaagaattcttcatgttat 447  Q
     ||||||| |||||||||||| |||||||||||||| ||||||| |||| |||| ||||||||||||||| |||||||    
T  8692609 tgccacacttccttgaattgtggcaaatagtacattatgattggatgctatttattcttgaagaattcttgatgttat 8692532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 271 - 447
Target Start/End: Complemental strand, 3456950 - 3456776
Alignment:
Q  271 aggaaaatgctatttctctagaaaaatagcatcaagaatttttcaagacacatttgacaagttttaattgcatgatttatttgttgacttcctatttttt 370  Q
    ||||||||||||||| |||||||||||||||||||||||||||   ||||||   |||||||||||||||||||||||||||||| |||||||||||||     
T  3456950 aggaaaatgctatttttctagaaaaatagcatcaagaattttt---gacacaaccgacaagttttaattgcatgatttatttgttcacttcctatttttc 3456854  T
Q  371 agccacacctccttgaattgtagcaaatagtacattgtgattggttgctcttta-tcttgaagaattcttcatgttat 447  Q
    || |||||||||||||||||| ||||||||| |||||||| ||  ||||||||| ||||||||||||| | |||||||    
T  3456853 agtcacacctccttgaattgtggcaaatagtgcattgtgagtgactgctctttattcttgaagaattcgtaatgttat 3456776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 97 - 230
Target Start/End: Original strand, 33338243 - 33338375
Alignment:
Q  97 gcattggataaaggaacaaaaatataaattttgtgttggaaaatgataaaaagtagttaaggcaacttgtaaaaagtttataaattgttgtttccaatgt 196  Q
    |||||||||||||||| ||||||| | ||||||| |||||||||||||||||||||| ||| |||||| |||||||||||||||||||||||||||||||    
T  33338243 gcattggataaaggaataaaaatagatattttgt-ttggaaaatgataaaaagtagtcaagtcaacttataaaaagtttataaattgttgtttccaatgt 33338341  T
Q  197 aaagctgctaattttggttaccttaaccattgcc 230  Q
    ||| || |||||||||||||| ||||||||||||    
T  33338342 aaaactactaattttggttactttaaccattgcc 33338375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 272 - 447
Target Start/End: Complemental strand, 34286793 - 34286618
Alignment:
Q  272 ggaaaatgctatttctctagaaaaatagcatcaagaatttttcaagacacatttgacaagttttaattgcatgatttatttgttgacttcctatttttta 371  Q
    |||||||| ||||||||||||||||||||||||| | ||||||||||||||  |||||| |||||||||||||||||||||||| | ||||||||||| |    
T  34286793 ggaaaatgttatttctctagaaaaatagcatcaaaattttttcaagacacaactgacaaattttaattgcatgatttatttgttcatttcctatttttca 34286694  T
Q  372 gccacacctccttgaattgtagcaaatagtacattgtgattggttgctctttatcttgaagaattcttcatgttat 447  Q
    ||||||||| | | |||||| ||||||||| ||| |||||||| |||| ||  ||||||| |||| || |||||||    
T  34286693 gccacaccttcattaattgtggcaaatagtgcatcgtgattggctgcttttattcttgaataattattgatgttat 34286618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 272 - 447
Target Start/End: Complemental strand, 228223 - 228047
Alignment:
Q  272 ggaaaatgctatttctctagaaaaatagcatcaagaatttttcaagacacatttgacaagttttaattgcatgatttatttgttgacttcctatttttta 371  Q
    |||||||||||||| |||||||||||| ||| || | ||||||||||||||  | |||||||||||||||||||| |||||||| |||| ||| |||| |    
T  228223 ggaaaatgctatttttctagaaaaataacattaaaattttttcaagacacaacttacaagttttaattgcatgatatatttgttcactttctacttttca 228124  T
Q  372 gccacacctccttgaattgtagcaaatagtacattgtgattggttgctcttta-tcttgaagaattcttcatgttat 447  Q
    | |||||||||||||||||| | ||||||| ||||||||||| ||| |||||| ||||||| ||||||| |||||||    
T  228123 gtcacacctccttgaattgtggtaaatagtgcattgtgattgattgttctttattcttgaaaaattcttgatgttat 228047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 74 - 230
Target Start/End: Original strand, 11680190 - 11680343
Alignment:
Q  74 aaatgctaaccaatacttttggggcattggataaaggaacaaaaatataaattttgtgttggaaaatgataaaaagtagttaaggcaacttgtaaaaagt 173  Q
    |||||||||||| | |  ||||||  ||| ||||||||||||||||| ||||||||||||||||||||||||||  |||||||| |||||||||||||||    
T  11680190 aaatgctaaccattgcccttggggttttgaataaaggaacaaaaatagaaattttgtgttggaaaatgataaaagatagttaagtcaacttgtaaaaagt 11680289  T
Q  174 ttataaattgttgtttccaatgtaaagctgctaattttggttaccttaaccattgcc 230  Q
        ||||||||||||||| |||||||||  ||||||||||||| ||||||||||||    
T  11680290 ---caaattgttgtttccagtgtaaagctattaattttggttactttaaccattgcc 11680343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 99 - 223
Target Start/End: Original strand, 28273373 - 28273497
Alignment:
Q  99 attggataaaggaacaaaaatataaattttgtgttggaaaatgataaaaagtagttaaggcaacttgtaaaaagtttataaattgttgtttccaatgtaa 198  Q
    |||| ||||||||||||||||| ||| |||||||| |||||||||||||||| |||||  |||||| ||| ||||||||||||||||||||||||| |||    
T  28273373 attgaataaaggaacaaaaatagaaactttgtgttagaaaatgataaaaagtggttaaatcaacttataacaagtttataaattgttgtttccaatataa 28273472  T
Q  199 agctgctaattttggttaccttaac 223  Q
    | || ||||||||||||||||||||    
T  28273473 aactactaattttggttaccttaac 28273497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 292 - 391
Target Start/End: Complemental strand, 40926015 - 40925916
Alignment:
Q  292 aaaaatagcatcaagaatttttcaagacacatttgacaagttttaattgcatgatttatttgttgacttcctattttttagccacacctccttgaattgt 391  Q
    |||| ||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||| ||||||||||||| ||||||||||| |||||||||    
T  40926015 aaaagtagcatcaagaatttttcaagacacatctgacaagttttaattgtatgatttatttgttcacttcctatttttcagccacacctctttgaattgt 40925916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 90 - 266
Target Start/End: Original strand, 5108401 - 5108572
Alignment:
Q  90 ttttggggcattggataaaggaacaaaaatataaattttgtgttggaaaatgataaaaagtagttaaggcaacttgtaaaaagtttataaattgttgttt 189  Q
    |||| ||| ||||||||||||||||||| || |  |||| ||||| ||||| ||||||||| || |||  || ||||||||| |||||||||||||||||    
T  5108401 tttttgggtattggataaaggaacaaaagta-attttttttgttgaaaaataataaaaagtggtcaagttaatttgtaaaaactttataaattgttgttt 5108499  T
Q  190 ccaatgtaaagctgctaattttggttaccttaaccattgccctcacggtaatgagggcaatggtaagcaagaccctt 266  Q
    |||||||||| ||||||||||||||||||||||  |||||||| | |||||    ||||||||| ||||||||||||    
T  5108500 ccaatgtaaaactgctaattttggttaccttaattattgccctgagggtaa----ggcaatggttagcaagaccctt 5108572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 92 - 227
Target Start/End: Complemental strand, 24397590 - 24397457
Alignment:
Q  92 ttggggcattggataaaggaacaaaaatataaattttgtgttggaaaatgataaaaagtagttaaggcaacttgtaaaaagtttataaattgttgtttcc 191  Q
    ||||||||||| |||||||||||||| || ||||||||||||| ||||||||||||||||||   | |||||||||||||||||||||||| |||||| |    
T  24397590 ttggggcattgaataaaggaacaaaa-ta-aaattttgtgttgaaaaatgataaaaagtagtcgcgtcaacttgtaaaaagtttataaattattgttttc 24397493  T
Q  192 aatgtaaagctgctaattttggttaccttaaccatt 227  Q
    ||| ||||||  |||||||||||||||||| |||||    
T  24397492 aatctaaagccactaattttggttaccttatccatt 24397457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 272 - 416
Target Start/End: Complemental strand, 5481552 - 5481408
Alignment:
Q  272 ggaaaatgctatttctctagaaaaatagcatcaagaatttttcaagacacatttgacaagttttaattgcatgatttatttgttgacttcctatttttta 371  Q
    |||||||  ||||||||||||||||||||||||||||||||| |||||||| |||  || |||||| ||||||||||||||||| ||||  ||||||| |    
T  5481552 ggaaaatattatttctctagaaaaatagcatcaagaattttttaagacacagttggtaaattttaactgcatgatttatttgttcactttttatttttca 5481453  T
Q  372 gccacacctccttgaattgtagcaaatagtacattgtgattggtt 416  Q
    |||||| |||  |||||||| ||||||| | |||||||| |||||    
T  5481452 gccacatctctatgaattgtggcaaataatgcattgtgaatggtt 5481408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 325 - 439
Target Start/End: Complemental strand, 29223610 - 29223497
Alignment:
Q  325 tgacaagttttaattgcatgatttatttgttgacttcctattttttagccacacctccttgaattgtagcaaatagtacattgtgattggttgctcttta 424  Q
    ||||||||||||||||||||||||||||||  ||||| ||||||| || |||||||||||||||||| ||||||||| ||||||| |||  ||||| |||    
T  29223610 tgacaagttttaattgcatgatttatttgtacacttcttatttttcagtcacacctccttgaattgtggcaaatagtgcattgtggttgactgctc-tta 29223512  T
Q  425 tcttgaagaattctt 439  Q
    | |||||||||||||    
T  29223511 ttttgaagaattctt 29223497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 329 - 434
Target Start/End: Original strand, 38614236 - 38614342
Alignment:
Q  329 aagttttaattgcatgatttatttgttgacttcctattttttagccacacctccttgaattgtagcaaatagtacattgtgattggttgctcttta-tct 427  Q
    ||||||||||||||||||||||||||| ||||||||||||| ||||||| || |||||||||| |||| |||| ||||||||||||  |||||||| |||    
T  38614236 aagttttaattgcatgatttatttgtttacttcctatttttcagccacatcttcttgaattgtggcaattagtgcattgtgattgggcgctctttattct 38614335  T
Q  428 tgaagaa 434  Q
    |||||||    
T  38614336 tgaagaa 38614342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 329 - 447
Target Start/End: Original strand, 11739275 - 11739394
Alignment:
Q  329 aagttttaattgcatgatttatttgttgacttcctattttttagccacacctccttgaattgtagcaaatagtacattgtgattggttgctcttta-tct 427  Q
    ||||||||||||||| ||||||||||| || |||||||||| ||||||||||||||||||||| ||||| ||| |||| |||||   |||| |||| |||    
T  11739275 aagttttaattgcataatttatttgttcacctcctatttttcagccacacctccttgaattgtggcaaacagtgcattatgattacctgctttttattct 11739374  T
Q  428 tgaagaattcttcatgttat 447  Q
    |||||||||||| |||||||    
T  11739375 tgaagaattcttgatgttat 11739394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 95 - 223
Target Start/End: Original strand, 8213016 - 8213143
Alignment:
Q  95 gggcattggataaaggaacaaaaatataaattttgtgttggaaaatgataaaaagtagttaaggcaacttgtaaaaagtttataaattgttgtttccaat 194  Q
    |||||||  ||||| ||||||||||| ||||| | ||||| ||||||||||||| || | ||  |||||||||||| ||||||||||| |||||||  ||    
T  8213016 gggcattacataaaagaacaaaaataaaaattctatgttgaaaaatgataaaaaataatcaaatcaacttgtaaaa-gtttataaattattgtttctgat 8213114  T
Q  195 gtaaagctgctaattttggttaccttaac 223  Q
    |||||||| ||||||||||||||||||||    
T  8213115 gtaaagctactaattttggttaccttaac 8213143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 316 - 391
Target Start/End: Original strand, 6614289 - 6614364
Alignment:
Q  316 agacacatttgacaagttttaattgcatgatttatttgttgacttcctattttttagccacacctccttgaattgt 391  Q
    ||||||| | |||||||||||||||||||||||||||||| ||||||||||||| || ||||||||||||||||||    
T  6614289 agacacagtcgacaagttttaattgcatgatttatttgttcacttcctatttttcaggcacacctccttgaattgt 6614364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 311 - 433
Target Start/End: Original strand, 41326486 - 41326609
Alignment:
Q  311 tttcaagacacatttgacaagttttaattgcatgatttatttgttgacttcctattttttagccacacctccttgaattgtagcaaatagtacattgtga 410  Q
    |||| ||| ||| ||| ||||| || |||||||  | |||||||| ||||||||||||| |||||||||||||||||||||  ||||||| |||||||||    
T  41326486 tttctagatacagttggcaagtgtttattgcatcgtgtatttgtttacttcctatttttcagccacacctccttgaattgtgtcaaatagcacattgtga 41326585  T
Q  411 ttggttgctcttta-tcttgaaga 433  Q
    |||| ||||||||| |||||||||    
T  41326586 ttggctgctctttattcttgaaga 41326609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 96 - 187
Target Start/End: Complemental strand, 41530493 - 41530402
Alignment:
Q  96 ggcattggataaaggaacaaaaatataaattttgtgttggaaaatgataaaaagtagttaaggcaacttgtaaaaagtttataaattgttgt 187  Q
    |||||||||||||||||  |||||| ||||||||||||| |||||||||||||   || ||| |||||| ||||||||||||||||||||||    
T  41530493 ggcattggataaaggaatgaaaatagaaattttgtgttgcaaaatgataaaaaacggtcaagtcaacttataaaaagtttataaattgttgt 41530402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 272 - 345
Target Start/End: Complemental strand, 42149030 - 42148957
Alignment:
Q  272 ggaaaatgctatttctctagaaaaatagcatcaagaatttttcaagacacatttgacaagttttaattgcatga 345  Q
    |||||| ||||||||||||||||||||| ||||||||||||||||||||||  ||| || ||||||||||||||    
T  42149030 ggaaaacgctatttctctagaaaaatagtatcaagaatttttcaagacacaactgataaattttaattgcatga 42148957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 308 - 447
Target Start/End: Original strand, 35672345 - 35672484
Alignment:
Q  308 atttttcaagacacatttgacaagttttaattgcatgatttatttgttgacttcctattttttagccacacctccttgaattgtagcaaatagtacattg 407  Q
    |||||| |||||||| |||| || |||||||||||||||||||||||| |||||||||| |||| | |||  ||||| |||||    ||||||| |||||    
T  35672345 atttttgaagacacagttgataaattttaattgcatgatttatttgttcacttcctattgttta-caacatttccttaaattgcgataaatagtgcattg 35672443  T
Q  408 tgattggttgctcttta-tcttgaagaattcttcatgttat 447  Q
    ||||||  ||||||||| ||||||| ||||||| |||||||    
T  35672444 tgattgactgctctttattcttgaaaaattcttaatgttat 35672484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 288 - 369
Target Start/End: Complemental strand, 31644812 - 31644729
Alignment:
Q  288 ctagaaaaatagcatcaagaatttttcaagacacat--ttgacaagttttaattgcatgatttatttgttgacttcctattttt 369  Q
    |||||||||||| |||||||||||| |||||||||   |||  |||||||||||||||| |||||||||| |||||||||||||    
T  31644812 ctagaaaaatagtatcaagaattttgcaagacacacaattggtaagttttaattgcatggtttatttgttcacttcctattttt 31644729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 299 - 425
Target Start/End: Complemental strand, 28434374 - 28434248
Alignment:
Q  299 gcatcaagaatttttcaagacacatttgacaagttttaattgcatgatttatttgttgacttcctattttttagccacacctccttgaattgtagcaaat 398  Q
    |||||||||||||||  ||| ||| ||  | ||||||||||||||||||||||| || | || |||||||  || |||| || ||| |||||| | ||||    
T  28434374 gcatcaagaatttttttagatacagttagcgagttttaattgcatgatttatttattcattttctattttacagtcacatcttcttaaattgtggtaaat 28434275  T
Q  399 agtacattgtgattggttgctctttat 425  Q
    ||| |||||| ||||| ||||||||||    
T  28434274 agtgcattgtaattggctgctctttat 28434248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 271 - 316
Target Start/End: Original strand, 43141518 - 43141563
Alignment:
Q  271 aggaaaatgctatttctctagaaaaatagcatcaagaatttttcaa 316  Q
    ||||||||| |||||||||||||||||||||||||||||| |||||    
T  43141518 aggaaaatgttatttctctagaaaaatagcatcaagaattcttcaa 43141563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 96 - 148
Target Start/End: Original strand, 19804515 - 19804567
Alignment:
Q  96 ggcattggataaaggaacaaaaatataaattttgtgttggaaaatgataaaaa 148  Q
    ||||||| ||||||||||||||||| ||||||||||||| ||| |||||||||    
T  19804515 ggcattgaataaaggaacaaaaatagaaattttgtgttgaaaagtgataaaaa 19804567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 276 - 318
Target Start/End: Original strand, 228027 - 228069
Alignment:
Q  276 aatgctatttctctagaaaaatagcatcaagaatttttcaaga 318  Q
    |||| ||| |||||||||||||| |||||||||||||||||||    
T  228027 aatgatatatctctagaaaaataacatcaagaatttttcaaga 228069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 395 - 447
Target Start/End: Complemental strand, 31644715 - 31644662
Alignment:
Q  395 aaatagtacattgtgattggttgctcttta-tcttgaagaattcttcatgttat 447  Q
    ||||||| |||||||||||| ||||||||| |||||||||||| || |||||||    
T  31644715 aaatagtgcattgtgattggctgctctttattcttgaagaattattgatgttat 31644662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 126; Significance: 1e-64; HSPs: 32)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 271 - 447
Target Start/End: Complemental strand, 13686194 - 13686017
Alignment:
Q  271 aggaaaatgctatttctctagaaaaatagcatcaagaatttttcaagacacatttgacaagttttaattgcatgatttatttgttgacttcctatttttt 370  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||| ||| |||||||||||||||||||||||||||| |||||||||||||     
T  13686194 aggaaaatgctatttctctagaaaaatagcatcaagaattttttaagacacaattggcaagttttaattgcatgatttatttgttcacttcctatttttc 13686095  T
Q  371 agccacacctccttgaattgtagcaaatagtacattgtgattggttgctcttta-tcttgaagaattcttcatgttat 447  Q
    ||||||||||||||||||||| |||| |||| |||||||||||| ||||||||| ||||||| ||||||| |||||||    
T  13686094 agccacacctccttgaattgtggcaagtagtgcattgtgattggctgctctttattcttgaaaaattcttgatgttat 13686017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 108; E-Value: 7e-54
Query Start/End: Original strand, 273 - 447
Target Start/End: Complemental strand, 19899118 - 19898943
Alignment:
Q  273 gaaaatgctatttctctagaaaaatagcatcaagaatttttcaagacacatttgacaagttttaattgcatgatttatttgttgacttcctattttttag 372  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||  || |||||||||||||||||||||||||||| |||||||| |||| ||    
T  19899118 gaaaatgctatttctctagaaaaatagcatcacgaatttttcaagacacaactggcaagttttaattgcatgatttatttgttcacttcctaattttcag 19899019  T
Q  373 ccacacctccttgaattgtagcaaatagtacattgtgattggttgctcttta-tcttgaagaattcttcatgttat 447  Q
    | | |||||||||||||||  |||||| | |||||||||||| ||||||||| ||||||||||||||| |||||||    
T  19899018 caatacctccttgaattgtgacaaataatgcattgtgattggctgctctttattcttgaagaattcttaatgttat 19898943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 268 - 447
Target Start/End: Original strand, 14940982 - 14941163
Alignment:
Q  268 tttaggaaaatgctatttctctagaaaaatagcatcaagaatttttcaagacacatttgacaagttttaattgcatgatttatttgttgacttcctattt 367  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||  || |||||||||||| ||||||||||||||| ||||| |||||    
T  14940982 tttaggaaaatgctatttctctagaaaaatagcatcaagaatttttcaagacacaactggcaagttttaatttcatgatttatttgttcacttcttattt 14941081  T
Q  368 tt-tagccacacctccttgaattgtagcaaatagtacattgtgattggttgctcttta-tcttgaagaattcttcatgttat 447  Q
    ||  || |||||||| ||||||||| ||||||||| |||||||||||  ||||||||| |||||||||||| || |||||||    
T  14941082 ttcgagtcacacctctttgaattgtggcaaatagtgcattgtgattgactgctctttattcttgaagaattattgatgttat 14941163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 105; E-Value: 5e-52
Query Start/End: Original strand, 276 - 447
Target Start/End: Original strand, 41464902 - 41465074
Alignment:
Q  276 aatgctatttctctagaaaaatagcatcaagaatttttcaagacacatttgacaagttttaattgcatgatttatttgttgacttcctattttttagcca 375  Q
    |||| |||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||| |||||||| | |||    
T  41464902 aatgttatttctctagaaaaataacatcaagaatttttcaagacacagttgacaagttttaattgcatgatttatttgttcactttctatttttcaacca 41465001  T
Q  376 cacctccttgaattgtagcaaatagtacattgtgattggttgctcttta-tcttgaagaattcttcatgttat 447  Q
    |||||||||||||||  ||||||||| |||||||||  | ||| ||||| ||||||||||||||| |||||||    
T  41465002 cacctccttgaattgcggcaaatagtgcattgtgatccgctgcactttattcttgaagaattcttgatgttat 41465074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 271 - 447
Target Start/End: Complemental strand, 25415114 - 25414937
Alignment:
Q  271 aggaaaatgctatttctctagaaaaatagcatcaagaatttttcaagacacatttgacaagttttaattgcatgatttatttgttgacttcctatttttt 370  Q
    ||||||||||||| ||||||||||||||| || |||||||||||||||||||  ||| ||||||||||||||||||||||||||| |||| || |||||     
T  25415114 aggaaaatgctatatctctagaaaaatagtataaagaatttttcaagacacagctgataagttttaattgcatgatttatttgttcactttctttttttc 25415015  T
Q  371 agccacacctccttgaattgtagcaaatagtacattgtgattggttgctcttta-tcttgaagaattcttcatgttat 447  Q
    ||||| ||||||||||||||| ||||||||| |||||||||||  || |||||| ||||||||||||||| |||||||    
T  25415014 agccatacctccttgaattgtggcaaatagtgcattgtgattgactgttctttattcttgaagaattcttgatgttat 25414937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 74 - 232
Target Start/End: Original strand, 9991420 - 9991578
Alignment:
Q  74 aaatgctaaccaatacttttggggcattggataaaggaacaaaaatataaattttgtgttggaaaatgataaaaagtagttaaggcaacttgtaaaaagt 173  Q
    |||||||||||| | |  |||||||||||||||||| |||||||||| ||||||||| |||||||||||||||||||||| ||  ||||||||||||| |    
T  9991420 aaatgctaaccattgcccttggggcattggataaagaaacaaaaatagaaattttgtattggaaaatgataaaaagtagtcaaatcaacttgtaaaaaat 9991519  T
Q  174 ttataaattgttgtttccaatgtaaagctgctaattttggttaccttaaccattgccct 232  Q
    |||||||||||||||| ||||||||| || ||||||||| |||||||||||||||||||    
T  9991520 ttataaattgttgttttcaatgtaaaactactaattttgattaccttaaccattgccct 9991578  T

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Target: chr2; HSP #7
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 271 - 439
Target Start/End: Complemental strand, 28429479 - 28429313
Alignment:
Q  271 aggaaaatgctatttctctagaaaaatagcatcaagaatttttcaagacacatttgacaagttttaattgcatgatttatttgttgacttcctatttttt 370  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| |||||   ||||||||||||||||||||||||||||||| ||||| |||||||     
T  28429479 aggaaaatgctatttctttagaaaaatagcatcaagaatttttcatgacac---tgacaagttttaattgcatgatttatttgttcacttcttatttttc 28429383  T
Q  371 agccacacctccttgaattgtagcaaatagtacattgtgattggttgctcttta-tcttgaagaattctt 439  Q
    || ||||||||||| |||| | ||||||| | ||||||| |||| ||||||||| |||||||||||||||    
T  28429382 agtcacacctccttaaattatggcaaataatgcattgtgtttggctgctctttattcttgaagaattctt 28429313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 289 - 447
Target Start/End: Original strand, 3810285 - 3810444
Alignment:
Q  289 tagaaaaatagcatcaagaatttttcaagacacatttgacaagttttaattgcatgatttatttgttgacttcctattttttagccacacctccttgaat 388  Q
    |||||||||||||||||||| |||||||||||||  || |||||||||||||||||||||||||||| ||||| ||||||| || |||||||||||||||    
T  3810285 tagaaaaatagcatcaagaaattttcaagacacagctggcaagttttaattgcatgatttatttgttcacttcttatttttcagtcacacctccttgaat 3810384  T
Q  389 tgtagcaaatagtacattgtgattggttgctcttta-tcttgaagaattcttcatgttat 447  Q
    ||| ||||||||| |||||| ||||| | ||||||| |||||||||||| || |||||||    
T  3810385 tgtggcaaatagtgcattgtaattggctactctttattcttgaagaattattaatgttat 3810444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 273 - 447
Target Start/End: Complemental strand, 42264030 - 42263855
Alignment:
Q  273 gaaaatgctatttctctagaaaaatagcatcaagaatttttcaagacacatttgacaagttttaattgcatgatttatttgttgacttcctattttttag 372  Q
    ||||||| |||||||||| |||||||||||||| | |||||||||||||    | |||||||||||||||| ||||||||||| | ||||||||||| ||    
T  42264030 gaaaatgttatttctctaaaaaaatagcatcaaaattttttcaagacacgacagtcaagttttaattgcataatttatttgttcatttcctatttttcag 42263931  T
Q  373 ccacacctccttgaattgtagcaaatagtacattgtgattggttgctcttta-tcttgaagaattcttcatgttat 447  Q
    |||||||||||||||||||  ||||| || |||||||||||| ||||||||| ||||||||||||||| |||||||    
T  42263930 ccacacctccttgaattgtgacaaattgtgcattgtgattggctgctctttattcttgaagaattcttgatgttat 42263855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 270 - 447
Target Start/End: Original strand, 45093146 - 45093320
Alignment:
Q  270 taggaaaatgctatttctctagaaaaatagcatcaagaatttttcaagacacatttgacaagttttaattgcatgatttatttgttgacttcctattttt 369  Q
    |||||||||| ||||||||||||||||||||||||||||||||| |||| ||| |||  || |||||||||||||||||| ||||| |||||||||||||    
T  45093146 taggaaaatgttatttctctagaaaaatagcatcaagaattttttaagatacagttgggaaattttaattgcatgatttaattgtttacttcctattttt 45093245  T
Q  370 tagccacacctccttgaattgtagcaaatagtacattgtgattggttgctcttta-tcttgaagaattcttcatgttat 447  Q
     || || ||||||||||||||| ||||||||| ||||||||    |||||||||| |||||||||||| || |||||||    
T  45093246 cagtcatacctccttgaattgtggcaaatagtgcattgtga----ttgctctttattcttgaagaattattgatgttat 45093320  T

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Target: chr2; HSP #11
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 272 - 391
Target Start/End: Original strand, 28716316 - 28716435
Alignment:
Q  272 ggaaaatgctatttctctagaaaaatagcatcaagaatttttcaagacacatttgacaagttttaattgcatgatttatttgttgacttcctatttttta 371  Q
    |||||||| ||||| ||||||||||||||||||||||||||||||||||||  || |||||||||||||||| ||||||||||| ||||||||||||| |    
T  28716316 ggaaaatgttatttttctagaaaaatagcatcaagaatttttcaagacacaactggcaagttttaattgcattatttatttgttcacttcctatttttca 28716415  T
Q  372 gccacacctccttgaattgt 391  Q
    |||||||||| |||||||||    
T  28716416 gccacacctctttgaattgt 28716435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 97 - 226
Target Start/End: Complemental strand, 41464391 - 41464262
Alignment:
Q  97 gcattggataaaggaacaaaaatataaattttgtgttggaaaatgataaaaagtagttaaggcaacttgtaaaaagtttataaattgttgtttccaatgt 196  Q
    |||||| ||||||||| ||||||| ||||||||| ||| ||||| ||||||||  || ||| ||||||||||||||||||||||||||||||||||||||    
T  41464391 gcattgaataaaggaataaaaatagaaattttgtattgaaaaattataaaaagcggtcaagtcaacttgtaaaaagtttataaattgttgtttccaatgt 41464292  T
Q  197 aaagctgctaattttggttaccttaaccat 226  Q
    |||| | |||||||||||||||||||||||    
T  41464291 aaagatactaattttggttaccttaaccat 41464262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 272 - 447
Target Start/End: Original strand, 35323474 - 35323650
Alignment:
Q  272 ggaaaatgctatttctctagaaaaatagcatcaagaatttttcaagacacatttgacaagttttaattgcatgatttatttgttgacttcctatttttta 371  Q
    |||||||| ||||||||||||||||||| || ||||||||||  ||||||| |||||||||||||||| |||||||||| |||| | ||  ||||||| |    
T  35323474 ggaaaatgttatttctctagaaaaatagtattaagaattttttcagacacagttgacaagttttaattacatgatttatatgttcagtttttatttttca 35323573  T
Q  372 gccacacctccttgaattgtagcaaatagtacattgtgattggttgctcttta-tcttgaagaattcttcatgttat 447  Q
    |||||||||| ||||||||| |||||||||  ||||||||||  || |||||| |||||||||||| || |||||||    
T  35323574 gccacacctcattgaattgtggcaaatagtgtattgtgattgactgttctttattcttgaagaatttttgatgttat 35323650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 271 - 447
Target Start/End: Original strand, 35676269 - 35676452
Alignment:
Q  271 aggaaaatgctatttctctagaaaaatagcatcaagaatttttcaagacacatttgacaagttttaattg-------catgatttatttgttgacttcct 363  Q
    ||||||||||||||||||||||||||||||||||||| |||||  |||||||  || |||||||||||||       ||| ||||||||||| ||||| |    
T  35676269 aggaaaatgctatttctctagaaaaatagcatcaagattttttttagacacaactggcaagttttaattgttcacttcat-atttatttgttcacttcat 35676367  T
Q  364 attttttagccacacctccttgaattgtagcaaatagtacattgtgattggttgctcttta-tcttgaagaattcttcatgttat 447  Q
    |||||| || |||||||||||||||||| ||||||||| ||||||| |||  ||||||||| |||| |||||||||| |||||||    
T  35676368 atttttcagtcacacctccttgaattgtggcaaatagtgcattgtggttgactgctctttattcttaaagaattcttgatgttat 35676452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 93 - 229
Target Start/End: Original strand, 32354728 - 32354864
Alignment:
Q  93 tggggcattggataaaggaacaaaaatataaattttgtgttggaaaatgataaaaagtagttaaggcaacttgtaaaaagtttataaattgttgtttcca 192  Q
    ||||| |||||||||||||||||||||| ||| ||  ||||| ||||||||||||||| || ||| |||||||||||||||||||||||| || ||| ||    
T  32354728 tggggtattggataaaggaacaaaaataaaaaattcctgttgaaaaatgataaaaagtggtcaagtcaacttgtaaaaagtttataaattattatttaca 32354827  T
Q  193 atgtaaagctgctaattttggttaccttaaccattgc 229  Q
    |||||||  | |||||||||||||||||||| |||||    
T  32354828 atgtaaaattactaattttggttaccttaactattgc 32354864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 74 - 228
Target Start/End: Complemental strand, 6084836 - 6084681
Alignment:
Q  74 aaatgctaaccaatacttttggggcattggataaaggaacaaaaat-ataaattttgtgttggaaaatgataaaaagtagttaaggcaacttgtaaaaag 172  Q
    |||||||||||| | |  || ||| ||||||||||||||||||||| | ||| ||||| ||| ||||||||||||||| || ||| ||| ||||||||||    
T  6084836 aaatgctaaccattgcccttagggtattggataaaggaacaaaaattaaaaaatttgtattgaaaaatgataaaaagtggtcaagtcaatttgtaaaaag 6084737  T
Q  173 tttataaattgttgtttccaatgtaaagctgctaattttggttaccttaaccattg 228  Q
    |||||||| | ||||||||||||||||||| |||||||| |||||||||| |||||    
T  6084736 tttataaaatattgtttccaatgtaaagctactaattttagttaccttaatcattg 6084681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 122 - 228
Target Start/End: Original strand, 3095067 - 3095173
Alignment:
Q  122 aaattttgtgttggaaaatgataaaaagtagttaaggcaacttgtaaaaagtttataaattgttgtttccaatgtaaagctgctaattttggttacctta 221  Q
    ||||||||||||||||||||||||||| |||| ||  |||||||||||||||||||||||| ||||||| ||||||||  | ||||||||||||||||||    
T  3095067 aaattttgtgttggaaaatgataaaaaatagtcaaatcaacttgtaaaaagtttataaattattgtttctaatgtaaaagtactaattttggttacctta 3095166  T
Q  222 accattg 228  Q
    |||||||    
T  3095167 accattg 3095173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 126 - 231
Target Start/End: Complemental strand, 36402541 - 36402436
Alignment:
Q  126 tttgtgttggaaaatgataaaaagtagttaaggcaacttgtaaaaagtttataaattgttgtttccaatgtaaagctgctaattttggttaccttaacca 225  Q
    |||||||| ||||||||| ||||||||| |||  ||||||||||||||||||||||||||||||||||| |||| || ||||||||||||||||||| ||    
T  36402541 tttgtgttcgaaaatgatcaaaagtagtcaagttaacttgtaaaaagtttataaattgttgtttccaatataaaactactaattttggttaccttaatca 36402442  T
Q  226 ttgccc 231  Q
    ||||||    
T  36402441 ttgccc 36402436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 91 - 216
Target Start/End: Complemental strand, 40356529 - 40356405
Alignment:
Q  91 tttggggcattggataaaggaacaaaaatataaattttgtgttggaaaatgataaaaagtagttaaggcaacttgtaaaaagtttataaattgttgtttc 190  Q
    |||||||||||||||||||||||||||||  ||||||| ||||  ||||||||||||||| |||||   || ||||| ||||||||||||||||||||||    
T  40356529 tttggggcattggataaaggaacaaaaatg-aaattttatgttaaaaaatgataaaaagtggttaaattaatttgtataaagtttataaattgttgtttc 40356431  T
Q  191 caatgtaaagctgctaattttggtta 216  Q
    |||| ||||| | |||||||||||||    
T  40356430 caatataaagttactaattttggtta 40356405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 268 - 399
Target Start/End: Original strand, 36690814 - 36690946
Alignment:
Q  268 tttaggaaaatgctatttctctagaaaaatagcatcaagaat--ttttcaagacacatttgacaagttttaattgcatgatttatttgttgacttcctat 365  Q
    |||||||||||||||||||| |||||||||| ||| ||||||  |||||||||||||  |||||| |||||||| | ||||||||||||| ||||||||     
T  36690814 tttaggaaaatgctatttctttagaaaaataacattaagaatatttttcaagacacagctgacaaattttaattacttgatttatttgttcacttccta- 36690912  T
Q  366 tttttagccacacctccttgaattgtagcaaata 399  Q
     ||| |||||| | |||||||||||| |||||||    
T  36690913 ctttcagccacgcttccttgaattgtggcaaata 36690946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 330 - 447
Target Start/End: Original strand, 29689277 - 29689392
Alignment:
Q  330 agttttaattgcatgatttatttgttgacttcctattttttagccacacctccttgaattgtagcaaatagtacattgtgattggttgctcttta-tctt 428  Q
    |||||||||||||||||||||| ||| ||||||||||||| || || ||||||||||||| ||||||||||| |||||||||   |||||||||| ||||    
T  29689277 agttttaattgcatgatttattagttcacttcctatttttcagtcaaacctccttgaattatagcaaatagtgcattgtgat---ttgctctttattctt 29689373  T
Q  429 gaagaattcttcatgttat 447  Q
     || ||||||| |||||||    
T  29689374 aaaaaattcttgatgttat 29689392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 98 - 171
Target Start/End: Complemental strand, 18904321 - 18904248
Alignment:
Q  98 cattggataaaggaacaaaaatataaattttgtgttggaaaatgataaaaagtagttaaggcaacttgtaaaaa 171  Q
    ||||| |||| |||| ||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||    
T  18904321 cattgaataagggaaaaaaaatagaaattttgtgttggaaaatgataaaaagtagttaagtcaacttgtaaaaa 18904248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 332 - 447
Target Start/End: Original strand, 2752692 - 2752808
Alignment:
Q  332 ttttaattgcatgatttatttgttgacttcctattttttagccacacctccttgaattgtagcaaatagtacattgtgattggttgct-ctttatcttga 430  Q
    ||||||||| ||||||||||| || ||||| ||||||| || || | ||||||||||||| ||||||||| |||||||||||| ||||  ||| ||||||    
T  2752692 ttttaattgtatgatttatttattcacttcttatttttcagtcagatctccttgaattgtggcaaatagtgcattgtgattggctgctattttttcttga 2752791  T
Q  431 agaattcttcatgttat 447  Q
    ||||||||| |||||||    
T  2752792 agaattcttaatgttat 2752808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 272 - 447
Target Start/End: Original strand, 16058375 - 16058548
Alignment:
Q  272 ggaaaatgctatttctctagaaaaatagcatcaagaatttttc-aagacacatttgacaagttttaattgcatgatttatttgttgacttcctatttttt 370  Q
    |||||||  |||||||||| ||||||||||||||||||||||  ||||||||    |||||||||| ||||||||||||||| || ||||| |||||||     
T  16058375 ggaaaatcttatttctcta-aaaaatagcatcaagaatttttttaagacaca----acaagttttatttgcatgatttatttattcacttcatatttttc 16058469  T
Q  371 agccacac--ctccttgaattgtagcaaatagtacattgtgattggttgctcttta-tcttgaagaattcttcatgttat 447  Q
    ||||||||  |||||||||||||  ||||| || |||| | || |  | ||||||| ||||||||||||||| |||||||    
T  16058470 agccacacaactccttgaattgtgacaaat-gttcattattatagactactctttattcttgaagaattcttaatgttat 16058548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 272 - 317
Target Start/End: Original strand, 2752614 - 2752659
Alignment:
Q  272 ggaaaatgctatttctctagaaaaatagcatcaagaatttttcaag 317  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||    
T  2752614 ggaaattgctatttctctagaaaaatagcatcaagaatttttcaag 2752659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 293 - 369
Target Start/End: Original strand, 40126520 - 40126596
Alignment:
Q  293 aaaatagcatcaagaatttttcaagacacatttgacaagttttaattgcatgatttatttgttgacttcctattttt 369  Q
    ||||||||||| ||||||||| |||| |||  | |||| ||||||||| |||||||||||||| |||||||||||||    
T  40126520 aaaatagcatcgagaattttttaagatacagctcacaaattttaattgtatgatttatttgttcacttcctattttt 40126596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 98 - 148
Target Start/End: Complemental strand, 5711231 - 5711181
Alignment:
Q  98 cattggataaaggaacaaaaatataaattttgtgttggaaaatgataaaaa 148  Q
    |||| |||||||||| ||||||| |||||||||||||||||||||||||||    
T  5711231 cattagataaaggaataaaaataaaaattttgtgttggaaaatgataaaaa 5711181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 272 - 313
Target Start/End: Complemental strand, 24413903 - 24413862
Alignment:
Q  272 ggaaaatgctatttctctagaaaaatagcatcaagaattttt 313  Q
    |||||||||||||||||||||||||||||||||| |||||||    
T  24413903 ggaaaatgctatttctctagaaaaatagcatcaataattttt 24413862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 276 - 318
Target Start/End: Original strand, 13685997 - 13686039
Alignment:
Q  276 aatgctatttctctagaaaaatagcatcaagaatttttcaaga 318  Q
    |||||||| |||||||||||||| |||||||||||||||||||    
T  13685997 aatgctatatctctagaaaaataacatcaagaatttttcaaga 13686039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 371 - 444
Target Start/End: Original strand, 28716437 - 28716511
Alignment:
Q  371 agccacacctccttgaattgtagcaaatagtacattgtgattggttgctcttta-tcttgaagaattcttcatgt 444  Q
    ||||||||||| ||||||||| ||||||||| ||||||||| || | || |||| ||||||||||||||| ||||    
T  28716437 agccacacctctttgaattgtggcaaatagtgcattgtgatcggctactatttattcttgaagaattcttgatgt 28716511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 363 - 447
Target Start/End: Original strand, 23454350 - 23454436
Alignment:
Q  363 tattttttagccacacctccttgaattgtagcaaa-tagtacattgtgattggttgctcttta-tcttgaagaattcttcatgttat 447  Q
    ||||||| || | ||||||||||||||||  |||| |||| |||||||||||  ||||||||| |||||||||||| || |||||||    
T  23454350 tatttttcagtcgcacctccttgaattgtgtcaaattagtgcattgtgattgactgctctttattcttgaagaattttttatgttat 23454436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 73 - 150
Target Start/End: Original strand, 39085771 - 39085848
Alignment:
Q  73 aaaatgctaaccaatacttttggggcattggataaaggaacaaaaatataaattttgtgttggaaaatgataaaaagt 150  Q
    ||||||||||||| | || ||||| ||||||||||||| | ||||||| |||| |    |||||||||||||||||||    
T  39085771 aaaatgctaaccattgctcttgggacattggataaagggataaaaatagaaatataacattggaaaatgataaaaagt 39085848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 121; Significance: 1e-61; HSPs: 26)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 272 - 447
Target Start/End: Original strand, 521763 - 521939
Alignment:
Q  272 ggaaaatgctatttctctagaaaaatagcatcaagaatttttcaagacacatttgacaagttttaattgcatgatttatttgttgacttcctatttttta 371  Q
    |||||||||||||| |||||| ||||| |||||||||||||| |||||||| ||| |||||||||||||||||||||||||||| ||||||||||||| |    
T  521763 ggaaaatgctatttatctagacaaatatcatcaagaattttttaagacacagttgtcaagttttaattgcatgatttatttgttcacttcctatttttca 521862  T
Q  372 gccacacctccttgaattgtagcaaatagtacattgtgattggttgctcttta-tcttgaagaattcttcatgttat 447  Q
    |||||||||||||||||||| ||||||||| |||||||||||| ||||||||| ||||||||||||||| |||||||    
T  521863 gccacacctccttgaattgtggcaaatagtgcattgtgattggctgctctttattcttgaagaattcttgatgttat 521939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 110; E-Value: 5e-55
Query Start/End: Original strand, 271 - 447
Target Start/End: Original strand, 23642977 - 23643154
Alignment:
Q  271 aggaaaatgctatttctctagaaaaatagcatcaagaatttttcaagacacatttgacaagttttaattgcatgatttatttgttgacttcctatttttt 370  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||| |||||||| ||| ||||||||||| ||||||||||||||    
T  23642977 aggaaaatgctatttctctagaaaaatagcatcaagaatttttcaagacacagctgacaaattttaattccataatttatttgttcacttcctatttttt 23643076  T
Q  371 agccacacctccttgaattgtagcaaatagtacattgtgattggttgctcttta-tcttgaagaattcttcatgttat 447  Q
    || |||||||||||||||||| ||||||||| |||||||||||  |  | |||| ||||||||||||||| |||||||    
T  23643077 agtcacacctccttgaattgtggcaaatagtgcattgtgattgactaatatttattcttgaagaattcttgatgttat 23643154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 110; E-Value: 5e-55
Query Start/End: Original strand, 271 - 447
Target Start/End: Complemental strand, 36517715 - 36517538
Alignment:
Q  271 aggaaaatgctatttctctagaaaaatagcatcaagaatttttcaagacacatttgacaagttttaattgcatgatttatttgttgacttcctatttttt 370  Q
    ||||||||||||||| |||||| ||||| | ||||||||||||||| ||||| ||| |||||||||||||||||||||||||||| ||||||||||||||    
T  36517715 aggaaaatgctatttatctagataaataacttcaagaatttttcaaaacacagttggcaagttttaattgcatgatttatttgttcacttcctatttttt 36517616  T
Q  371 agccacacctccttgaattgtagcaaatagtacattgtgattggttgctcttta-tcttgaagaattcttcatgttat 447  Q
    |  |||||||||||||||||| ||||||||| |||||||||||  ||||||||| ||||||||||||||| |||||||    
T  36517615 attcacacctccttgaattgtggcaaatagtgcattgtgattgactgctctttattcttgaagaattcttgatgttat 36517538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 274 - 447
Target Start/End: Complemental strand, 45166424 - 45166250
Alignment:
Q  274 aaaatgctatttctctagaaaaatagcatcaagaatttttcaagacacatttgacaagttttaattgcatgatttatttgttgacttcctattttttagc 373  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| || ||| ||| |||||||||||||||||||||||  ||| ||||||||| |||    
T  45166424 aaaatgttatttctctagaaaaatagcatcaagaatttttcaagacgcagttggcaaattttaattgcatgatttatttgtccactccctatttttcagc 45166325  T
Q  374 cacacctccttgaattgtagcaaatagtacattgtgattggttgctcttta-tcttgaagaattcttcatgttat 447  Q
    ||| |||||||||||||| ||||||||| |||||||||||| ||||||||| | ||||||||||||| |||||||    
T  45166324 cacgcctccttgaattgtggcaaatagtgcattgtgattggctgctctttattattgaagaattcttgatgttat 45166250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 271 - 447
Target Start/End: Complemental strand, 31788506 - 31788329
Alignment:
Q  271 aggaaaatgctatttctctagaaaaatagcatcaagaatttttcaagacacatttgacaagttttaattgcatgatttatttgttgacttcctatttttt 370  Q
    ||||||||| |||||||||| ||||||| | ||||||||||||||||||||| |||||||||||||| |||| |||||||||||| |||||||||||||     
T  31788506 aggaaaatgttatttctctataaaaataacttcaagaatttttcaagacacaattgacaagttttaactgcaagatttatttgttcacttcctatttttc 31788407  T
Q  371 agccacacctccttgaattgtagcaaatagtacattgtgattggttgctcttta-tcttgaagaattcttcatgttat 447  Q
    |  |||||||||||||||||| | ||||||| |||||||||||| ||||||||| ||||||||||||||| |||||||    
T  31788406 aatcacacctccttgaattgtggtaaatagtgcattgtgattggctgctctttattcttgaagaattcttgatgttat 31788329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 271 - 447
Target Start/End: Original strand, 50612872 - 50613049
Alignment:
Q  271 aggaaaatgctatttctctagaaaaatagcatcaagaatttttcaagacacatttgacaagttttaattgcatgatttatttgttgacttcctatttttt 370  Q
    ||||||||| |||||||||| ||||| ||||||||||||||||||| |||||  ||||||||||||||||||| ||||||||||| ||||  |||||||     
T  50612872 aggaaaatgttatttctctataaaaacagcatcaagaatttttcaatacacagctgacaagttttaattgcataatttatttgttcactttatatttttc 50612971  T
Q  371 agccacacctccttgaattgtagcaaatagtacattgtgattggttgctcttta-tcttgaagaattcttcatgttat 447  Q
    || |||||||||||||||||| ||||||||| |||||||||||| ||||||||| ||||||||||||||| |||||||    
T  50612972 agtcacacctccttgaattgtggcaaatagtgcattgtgattggctgctctttattcttgaagaattcttgatgttat 50613049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 274 - 439
Target Start/End: Original strand, 38176390 - 38176556
Alignment:
Q  274 aaaatgctatttctctagaaaaatagcatcaagaatttttcaagacacatttgacaagttttaattgcatgatttatttgttgacttcctattttttagc 373  Q
    |||||| ||||||| |||||||||||||| ||||||||||||||||||| ||| ||||||||||||||||| |||||||||| ||||| ||||||| |||    
T  38176390 aaaatgatatttctttagaaaaatagcattaagaatttttcaagacacagttggcaagttttaattgcatgttttatttgttcacttcatatttttcagc 38176489  T
Q  374 cacacctccttgaattgtagcaaatagtacattgtgattggttgctcttta-tcttgaagaattctt 439  Q
    |||||||||||||||||  ||||||||| ||||| |||||| ||||||||| |||||||||||||||    
T  38176490 cacacctccttgaattgaggcaaatagtgcattgcgattggctgctctttattcttgaagaattctt 38176556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 301 - 447
Target Start/End: Original strand, 1561283 - 1561430
Alignment:
Q  301 atcaagaatttttcaagacacatttgacaagttttaattgcatgatttatttgttgacttcctattttttagccacacctccttgaattgtagcaaatag 400  Q
    |||||||||||||  |||||||  |||||||||| |||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| ||||||||    
T  1561283 atcaagaattttttcagacacagctgacaagtttcaattgcatgatttatttgttcacttcctatttttcagccacacctccttgaattgtggcaaatag 1561382  T
Q  401 tacattgtgattggttgctcttta-tcttgaagaattcttcatgttat 447  Q
    | |||||||||||||||||||||| ||||||||||||||| |||||||    
T  1561383 tgcattgtgattggttgctctttattcttgaagaattcttgatgttat 1561430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 98; E-Value: 7e-48
Query Start/End: Original strand, 92 - 229
Target Start/End: Complemental strand, 38611469 - 38611332
Alignment:
Q  92 ttggggcattggataaaggaacaaaaatataaattttgtgttggaaaatgataaaaagtagttaaggcaacttgtaaaaagtttataaattgttgtttcc 191  Q
    ||||| ||||||||||||||| ||||||| ||||||||||||||||||||||| ||||| || ||| |||||||||||||||||||||||||||||||||    
T  38611469 ttgggacattggataaaggaagaaaaatagaaattttgtgttggaaaatgatagaaagttgtcaagtcaacttgtaaaaagtttataaattgttgtttcc 38611370  T
Q  192 aatgtaaagctgctaattttggttaccttaaccattgc 229  Q
    ||| ||||||| |||||||| |||||||||||||||||    
T  38611369 aatataaagctactaattttagttaccttaaccattgc 38611332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 98; E-Value: 7e-48
Query Start/End: Original strand, 271 - 439
Target Start/End: Complemental strand, 39145452 - 39145283
Alignment:
Q  271 aggaaaatgctatttctctagaaaaatagcatcaagaatttttcaagacacatttgacaagttttaattgcatgatttatttgttgacttcctatttttt 370  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||| ||| ||||||||||||| ||||||| |||||| | |||||||||||     
T  39145452 aggaaaatgctatttctctagaaaaatagcatcaagaatttgtcaagacacagttgtcaagttttaattgtatgatttctttgttcatttcctatttttc 39145353  T
Q  371 agccacacctccttgaattgtagcaaatagtacattgtgattggttgctcttta-tcttgaagaattctt 439  Q
    || || ||||| ||||||||||||||||||| |||||| ||||| |||| |||| |||| ||||||||||    
T  39145352 agtcatacctcattgaattgtagcaaatagtgcattgtaattggctgctttttattcttaaagaattctt 39145283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 74 - 222
Target Start/End: Original strand, 46055753 - 46055901
Alignment:
Q  74 aaatgctaaccaatacttttggggcattggataaaggaacaaaaatataaattttgtgttggaaaatgataaaaagtagttaaggcaacttgtaaaaagt 173  Q
    |||||||||||| | |  |||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||| |||||||||||||||    
T  46055753 aaatgctaaccattgcccttggagcattggataaaggaacaaaaatagaaattttgtgttggaaaatgataaaaagtagtcaagtcaacttgtaaaaagt 46055852  T
Q  174 ttataaattgttgtttccaatgtaaagctgctaattttggttaccttaa 222  Q
    | ||||||||||||||  |||||||| || |||||||||||||||||||    
T  46055853 taataaattgttgtttttaatgtaaaactactaattttggttaccttaa 46055901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 272 - 447
Target Start/End: Complemental strand, 52546942 - 52546766
Alignment:
Q  272 ggaaaatgctatttctctagaaaaatagcatcaagaatttttcaagacacatttgacaagttttaattgcatgatttatttgttgacttcctatttttta 371  Q
    |||||||||||||||||||||||||| |||||||||||||| |||||||||  | ||||||||||||||||| ||||||||||| | ||||||||||| |    
T  52546942 ggaaaatgctatttctctagaaaaattgcatcaagaattttccaagacacaccttacaagttttaattgcataatttatttgttcatttcctatttttca 52546843  T
Q  372 gccacacctccttgaattgtagcaaatagtacattgtgattggttgctcttta-tcttgaagaattcttcatgttat 447  Q
      |||||||| |||||||||  ||||||| ||||||||||||| ||||||||| |||||||||||| || |||||||    
T  52546842 ctcacacctcattgaattgtgacaaatagcacattgtgattggctgctctttattcttgaagaatttttgatgttat 52546766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 112 - 226
Target Start/End: Original strand, 38014655 - 38014769
Alignment:
Q  112 acaaaaatataaattttgtgttggaaaatgataaaaagtagttaaggcaacttgtaaaaagtttataaattgttgtttccaatgtaaagctgctaatttt 211  Q
    ||||||||||||||||||||||||||||||||||||||| || ||| |||||| |||||||||||||||| |||||||||||||||||||| ||||||||    
T  38014655 acaaaaatataaattttgtgttggaaaatgataaaaagtggtcaagtcaacttataaaaagtttataaatcgttgtttccaatgtaaagctactaatttt 38014754  T
Q  212 ggttaccttaaccat 226  Q
    | |||||||||||||    
T  38014755 gattaccttaaccat 38014769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 289 - 447
Target Start/End: Complemental strand, 20912350 - 20912191
Alignment:
Q  289 tagaaaaatagcatcaagaatttttcaagacacatttgacaagttttaattgcatgatttatttgttgacttcctattttttagccacacctccttgaat 388  Q
    ||||||||||||||||||||||||| |||||| |  ||| ||||||||||||||||||||||||||| ||||||||||||| || ||||||||||| |||    
T  20912350 tagaaaaatagcatcaagaatttttaaagacatagctgataagttttaattgcatgatttatttgttcacttcctatttttcagtcacacctccttaaat 20912251  T
Q  389 tgtagcaaatagtacattgtgattggttgctcttta-tcttgaagaattcttcatgttat 447  Q
    | |  |||||||| |||||| ||||  ||||||||| ||||||||||||||| |||||||    
T  20912250 tatgacaaatagtgcattgttattgactgctctttattcttgaagaattcttgatgttat 20912191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 272 - 439
Target Start/End: Original strand, 34624486 - 34624643
Alignment:
Q  272 ggaaaatgctatttctctagaaaaatagcatcaagaatttttcaagacacatttgacaagttttaattgcatgatttatttgttgacttcctatttttta 371  Q
    |||||||| ||||||||||||||||||||||||||||||||| |||| |           |||||||||||||||||||||||| ||||||||||||| |    
T  34624486 ggaaaatgttatttctctagaaaaatagcatcaagaattttttaagaaa-----------ttttaattgcatgatttatttgttcacttcctatttttca 34624574  T
Q  372 gccacacctccttgaattgtagcaaatagtacattgtgattggttgctcttta-tcttgaagaattctt 439  Q
    ||||||| ||||  |||||| | ||||||| |||||||||||| ||||||||| |||||||||||||||    
T  34624575 gccacacttcctcaaattgtggtaaatagtgcattgtgattggctgctctttattcttgaagaattctt 34624643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 100 - 216
Target Start/End: Original strand, 36473310 - 36473426
Alignment:
Q  100 ttggataaaggaacaaaaatataaattttgtgttggaaaatgataaaaagtagttaaggcaacttgtaaaaagtttataaattgttgtttccaatgtaaa 199  Q
    ||||||||||||||||||||| ||| ||||||||| ||||||||||||||| || ||| |||| |||||||||||||||||||||| ||| ||||| |||    
T  36473310 ttggataaaggaacaaaaatagaaaatttgtgttgaaaaatgataaaaagtggtcaagtcaacgtgtaaaaagtttataaattgttattttcaatgcaaa 36473409  T
Q  200 gctgctaattttggtta 216  Q
    ||| |||||||||||||    
T  36473410 gctactaattttggtta 36473426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 271 - 433
Target Start/End: Original strand, 51297021 - 51297186
Alignment:
Q  271 aggaaaatgctatttctctagaaaaa-tagcatcaagaatttttcaagacacat-ttgacaagttttaattgcatgatttatttgttgacttcctatttt 368  Q
    ||||||||| |||||||||| ||||| ||||||||| | ||||||||||| ||  |||| || |||||||||||||||||||||||| |||| |||||||    
T  51297021 aggaaaatgttatttctctaaaaaaaatagcatcaaaattttttcaagacgcaagttgataaattttaattgcatgatttatttgttcactttctatttt 51297120  T
Q  369 ttagccacacctccttgaattgtagcaaatagtacattgtgattggttgctctttat-cttgaaga 433  Q
    | || || ||||  ||||||||| ||||||||| ||||||| |||| || ||||||| ||||||||    
T  51297121 tcagtcatacctttttgaattgtggcaaatagtgcattgtggttggctgttctttatgcttgaaga 51297186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 98 - 230
Target Start/End: Complemental strand, 20499437 - 20499306
Alignment:
Q  98 cattggataaaggaacaaaaatataaattttgtgttggaaaatgataaaaagtagttaaggcaacttgtaaaaagtttataaattgttgtttccaatgta 197  Q
    ||||||||||||||||||||||| ||||||||||||| |||| ||||||||||| | ||| ||| || ||||||||||||||||| || |||  ||| ||    
T  20499437 cattggataaaggaacaaaaatagaaattttgtgttg-aaaacgataaaaagtaatcaagtcaatttataaaaagtttataaattattatttttaatata 20499339  T
Q  198 aagctgctaattttggttaccttaaccattgcc 230  Q
    || ||  ||||||||||||| ||||||||||||    
T  20499338 aaactattaattttggttactttaaccattgcc 20499306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 92 - 185
Target Start/End: Original strand, 52313461 - 52313553
Alignment:
Q  92 ttggggcattggataaaggaacaaaaatataaattttgtgttggaaaatgataaaaagtagttaaggcaacttgtaaaaagtttataaattgtt 185  Q
    |||| |||||||||||||||||||||||  ||||||||||||  ||||| ||||||||| || ||  |||||| ||||| ||||||||||||||    
T  52313461 ttggagcattggataaaggaacaaaaatcaaaattttgtgtt-aaaaatcataaaaagtggtcaaatcaacttataaaaggtttataaattgtt 52313553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 328 - 391
Target Start/End: Original strand, 22650450 - 22650513
Alignment:
Q  328 caagttttaattgcatgatttatttgttgacttcctattttttagccacacctccttgaattgt 391  Q
    |||||||||||||||||||||||||||| ||||  || |||| |||||||||||||| ||||||    
T  22650450 caagttttaattgcatgatttatttgttcactttttacttttcagccacacctccttaaattgt 22650513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 328 - 434
Target Start/End: Complemental strand, 9496674 - 9496567
Alignment:
Q  328 caagttttaattgcatgatttatttgttgacttcctattttttagccacacctccttgaattgtagcaaatagtacattgtgattggttgctcttta-tc 426  Q
    |||| ||||| ||||||||||||||||| ||| ||||||||| ||| ||||| |  || ||||| ||||| |||  ||||||||||| | ||||||| ||    
T  9496674 caagctttaactgcatgatttatttgttcactccctatttttcagcaacaccactgtgtattgtggcaaacagtgaattgtgattggctactctttattc 9496575  T
Q  427 ttgaagaa 434  Q
    ||||||||    
T  9496574 ttgaagaa 9496567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 648 - 708
Target Start/End: Complemental strand, 51941431 - 51941370
Alignment:
Q  648 ttccggtgaccgtccaccggac-ggcggcgacaacaccattgaccgtcaatcattctcctcc 708  Q
    ||||| ||||||||||||| || |||||||| |||||||||||| |||||| ||||||||||    
T  51941431 ttccgatgaccgtccaccgtaccggcggcgataacaccattgactgtcaattattctcctcc 51941370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 98 - 194
Target Start/End: Original strand, 21195283 - 21195379
Alignment:
Q  98 cattggataaaggaacaaaaatataaattttgtgttggaaaatgataaaaagtagttaaggcaacttgtaaaaagtttataaattgttgtttccaat 194  Q
    |||||| |||||||||||||||| |||| |  ||||||||| |||| |||||| || ||  |||||| | ||||||| | |||||||| ||||||||    
T  21195283 cattggttaaaggaacaaaaatagaaatatcttgttggaaagtgatgaaaagtggtgaattcaactttttaaaagttaaaaaattgttatttccaat 21195379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 171 - 223
Target Start/End: Original strand, 24980126 - 24980178
Alignment:
Q  171 agtttataaattgttgtttccaatgtaaagctgctaattttggttaccttaac 223  Q
    |||||||||||||||||||||||  ||||| | |||||||||||| |||||||    
T  24980126 agtttataaattgttgtttccaacataaagttactaattttggttgccttaac 24980178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 97 - 217
Target Start/End: Original strand, 32734503 - 32734623
Alignment:
Q  97 gcattggataaaggaacaaaaatataaattttgtgttggaaaatgataaaaagtagttaaggcaacttgtaaaaagtttataaattgttgtttccaatgt 196  Q
    ||||||| ||| | || |||||||  ||| || ||||| ||| || |||||| | || ||| |||||| ||||||| ||| |||||||||||||||||      
T  32734503 gcattggttaaggaaataaaaatagcaatattatgttgaaaagtggtaaaaaatggtcaagtcaacttctaaaaaggttagaaattgttgtttccaatac 32734602  T
Q  197 aaagctgctaattttggttac 217  Q
    |||||| |||||||| |||||    
T  32734603 aaagctactaattttagttac 32734623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 276 - 318
Target Start/End: Complemental strand, 50613069 - 50613027
Alignment:
Q  276 aatgctatttctctagaaaaatagcatcaagaatttttcaaga 318  Q
    |||||||| |||||||||||||| ||||||||||| |||||||    
T  50613069 aatgctatatctctagaaaaataacatcaagaattcttcaaga 50613027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 120; Significance: 5e-61; HSPs: 32)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 120; E-Value: 5e-61
Query Start/End: Original strand, 273 - 447
Target Start/End: Original strand, 37674000 - 37674175
Alignment:
Q  273 gaaaatgctatttctctagaaaaatagcatcaagaatttttcaagacacatttgacaagttttaattgcatgatttatttgttgacttcctattttttag 372  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||| ||||  ||||||| ||    
T  37674000 gaaaatgatatttctctagaaaaatagcatcaagaatttttcaagacacgtgtgacaagttttaattgcatgatttatttgttaactttttatttttcag 37674099  T
Q  373 ccacacctccttgaattgtagcaaatagtacattgtgattggttgctcttta-tcttgaagaattcttcatgttat 447  Q
    ||||||||| ||||||||||| |||||||||||||||||||  ||||||||| ||||||||||||||| |||||||    
T  37674100 ccacacctctttgaattgtagtaaatagtacattgtgattgactgctctttagtcttgaagaattcttgatgttat 37674175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 113; E-Value: 8e-57
Query Start/End: Original strand, 272 - 447
Target Start/End: Complemental strand, 41633416 - 41633241
Alignment:
Q  272 ggaaaatgctatttctctagaaaaatagcatcaagaatttttcaagacacatttgacaagttttaattgcatgatttatttgttgacttcctatttttta 371  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |  |||||| |||||||| ||| ||||||||||| ||||||||||||| |    
T  41633416 ggaaaatgctatttctctagaaaaatagcatcaagaatttttcaagacaaagctgacaaattttaattacat-atttatttgttcacttcctatttttca 41633318  T
Q  372 gccacacctccttgaattgtagcaaatagtacattgtgattggttgctcttta-tcttgaagaattcttcatgttat 447  Q
    |||||||||||||||||||| |||| |||| |||||||||||| ||||||||| ||||||||||||||| |||||||    
T  41633317 gccacacctccttgaattgtggcaagtagtgcattgtgattggctgctctttattcttgaagaattcttaatgttat 41633241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 273 - 447
Target Start/End: Complemental strand, 24683275 - 24683100
Alignment:
Q  273 gaaaatgctatttctctagaaaaatagcatcaagaatttttcaagacacatttgacaagttttaattgcatgatttatttgttgacttcctattttttag 372  Q
    ||||||| ||||||| ||||||||||| |||||||||||||||||||||| |||| ||||||||||||||||||||||||||| ||||||||||||| ||    
T  24683275 gaaaatgttatttctttagaaaaatagtatcaagaatttttcaagacacacttgataagttttaattgcatgatttatttgttcacttcctatttttcag 24683176  T
Q  373 ccacacctccttgaattgtagcaaatagtacattgtgattggttgctcttta-tcttgaagaattcttcatgttat 447  Q
     ||||||| | |||||||| ||||||||| |||||||||||| ||||||||| ||||||||||||||| |||||||    
T  24683175 tcacaccttcctgaattgtggcaaatagtgcattgtgattggctgctctttattcttgaagaattcttgatgttat 24683100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 110; E-Value: 5e-55
Query Start/End: Original strand, 271 - 447
Target Start/End: Original strand, 18375389 - 18375565
Alignment:
Q  271 aggaaaatgctatttctctagaaaaatagcatcaagaatttttcaagacacatttgacaagttttaattgcatgatttatttgttgacttcctatttttt 370  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||  || |||||||||||||||||||||||||||| |||||||| ||||     
T  18375389 aggaaaatgttatttctctagaaaaatagcatcaagaatttttcaagacacaactggcaagttttaattgcatgatttatttgttcacttccta-ttttc 18375487  T
Q  371 agccacacctccttgaattgtagcaaatagtacattgtgattggttgctcttta-tcttgaagaattcttcatgttat 447  Q
    ||||||||||||||||||||| ||||||||| |||||||||||   || ||||| ||||||||||||||| |||||||    
T  18375488 agccacacctccttgaattgtggcaaatagtgcattgtgattgaccgcactttattcttgaagaattcttgatgttat 18375565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 74 - 234
Target Start/End: Original strand, 16559974 - 16560136
Alignment:
Q  74 aaatgctaaccaatacttttggggcattggataaaggaacaaaaatataaattttgtgttggaaaatgataaaaagta--gttaaggcaacttgtaaaaa 171  Q
    |||||||||||| | |  ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||  |  || ||| |||||||||||||    
T  16559974 aaatgctaaccattgcccttggggcattggataaaggaataaaaatagaaattttgtgttggaaaatgataaaaaaaatggtcaagtcaacttgtaaaaa 16560073  T
Q  172 gtttataaattgttgtttccaatgtaaagctgctaattttggttaccttaaccattgccctca 234  Q
    |||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||    
T  16560074 gtttataaattgttgtttccaatgtaaaactactaattttggttaccttaaccattgccctca 16560136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 272 - 414
Target Start/End: Complemental strand, 54358312 - 54358170
Alignment:
Q  272 ggaaaatgctatttctctagaaaaatagcatcaagaatttttcaagacacatttgacaagttttaattgcatgatttatttgttgacttcctatttttta 371  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||| | ||| |||||||||||||||||||||||||||| ||||||||||||| |    
T  54358312 ggaaaatgttatttctctagaaaaatagcatcaagaatttttcaagacatagttggcaagttttaattgcatgatttatttgttcacttcctatttttca 54358213  T
Q  372 gccacacctccttgaattgtagcaaatagtacattgtgattgg 414  Q
    |||||||| |||| |||||| ||||||||| ||||||||||||    
T  54358212 gccacacccccttaaattgtggcaaatagtgcattgtgattgg 54358170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 92 - 232
Target Start/End: Original strand, 31463291 - 31463431
Alignment:
Q  92 ttggggcattggataaaggaacaaaaatataaattttgtgttggaaaatgataaaaagtagttaaggcaacttgtaaaaagtttataaattgttgtttcc 191  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||| || ||| |||||||||||||||||| ||||||||||||||    
T  31463291 ttggggcattggataaaggaacaaaaatagaaattttgtgttggaaagtggtaaaaagtggtcaagtcaacttgtaaaaagtttacaaattgttgtttcc 31463390  T
Q  192 aatgtaaagctgctaattttggttaccttaaccattgccct 232  Q
    || ||||| || |||||||||||||||| ||||||||||||    
T  31463391 aacgtaaaactactaattttggttacctcaaccattgccct 31463431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 94 - 231
Target Start/End: Complemental strand, 54400317 - 54400182
Alignment:
Q  94 ggggcattggataaaggaacaaaaatataaattttgtgttggaaaatgataaaaagtagttaaggcaacttgtaaaaagtttataaattgttgtttccaa 193  Q
    ||||||||||||||||||| ||||||| ||||||||||||||||||||||||||| | |||||| ||||||||||||||||||| ||||||||||||| |    
T  54400317 ggggcattggataaaggaataaaaataaaaattttgtgttggaaaatgataaaaa-tggttaagtcaacttgtaaaaagtttat-aattgttgtttccga 54400220  T
Q  194 tgtaaagctgctaattttggttaccttaaccattgccc 231  Q
    |||||||||  |||||||||||||||||||||||||||    
T  54400219 tgtaaagctattaattttggttaccttaaccattgccc 54400182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 78 - 232
Target Start/End: Original strand, 19934449 - 19934603
Alignment:
Q  78 gctaaccaatacttttggggcattggataaaggaacaaaaatataaattttgtgttggaaaatgataaaaagtagttaaggcaacttgtaaaaagtttat 177  Q
    |||||||| | | ||||||  |||||| ||||||||||||||| ||||||||| ||||||||||||||||| | || ||| |||||||||||||||||||    
T  19934449 gctaaccattgcctttgggatattggagaaaggaacaaaaataaaaattttgtattggaaaatgataaaaaatggtcaagtcaacttgtaaaaagtttat 19934548  T
Q  178 aaattgttgtttccaatgtaaagctgctaattttggttaccttaaccattgccct 232  Q
    ||||||||||||  |||||||| || ||||||||||||| |||||||||||||||    
T  19934549 aaattgttgtttttaatgtaaaactactaattttggttatcttaaccattgccct 19934603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 272 - 447
Target Start/End: Original strand, 23348112 - 23348291
Alignment:
Q  272 ggaaaatgctatttctctagaaaaatagcatcaagaatttttcaagacacatttgacaagttttaattgcatgatttatttgttgact---tcctatttt 368  Q
    |||||||||||||||||||||||||||||||||| |||||||||||| |||   |||||||||||||||||||||||||||||| |||   |||||||||    
T  23348112 ggaaaatgctatttctctagaaaaatagcatcaataatttttcaagaaacaaccgacaagttttaattgcatgatttatttgttcacttcctcctatttt 23348211  T
Q  369 ttagccacacctccttgaattgtagcaaatagtacattgtgattggttgctcttta-tcttgaagaattcttcatgttat 447  Q
    | ||||||||||||||||||| | | |||||||  ||||||||||  || |||||| |||| ||||||| || |||||||    
T  23348212 tcagccacacctccttgaattatggtaaatagtgtattgtgattgagtgttctttattcttaaagaattattgatgttat 23348291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 271 - 391
Target Start/End: Original strand, 17847540 - 17847660
Alignment:
Q  271 aggaaaatgctatttctctagaaaaatagcatcaagaatttttcaagacacatttgacaagttttaattgcatgatttatttgttgacttcctatttttt 370  Q
    ||||||||| ||||||||| |||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||| |||| ||||||||     
T  17847540 aggaaaatgttatttctctcgaaaaatagcatcaagaatttttcaagacacagttggcaagttttaattgcatgatttatttgttcactttctatttttc 17847639  T
Q  371 agccacacctccttgaattgt 391  Q
     | ||||||||||||||||||    
T  17847640 tgtcacacctccttgaattgt 17847660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 92 - 232
Target Start/End: Complemental strand, 22665793 - 22665653
Alignment:
Q  92 ttggggcattggataaaggaacaaaaatataaattttgtgttggaaaatgataaaaagtagttaaggcaacttgtaaaaagtttataaattgttgtttcc 191  Q
    |||||||||||||||| |||||||||||| ||||||| ||||||||||||||||||||| || ||| ||| |||||||||||||| ||||||||||||||    
T  22665793 ttggggcattggataagggaacaaaaatagaaattttctgttggaaaatgataaaaagtggtcaagtcaaattgtaaaaagtttacaaattgttgtttcc 22665694  T
Q  192 aatgtaaagctgctaattttggttaccttaaccattgccct 232  Q
    |||||||| ||  ||| ||||||||||||||| | ||||||    
T  22665693 aatgtaaaactattaaatttggttaccttaactagtgccct 22665653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 271 - 413
Target Start/End: Original strand, 4512160 - 4512303
Alignment:
Q  271 aggaaaatgctatttctctagaaaa-atagcatcaagaatttttcaagacacatttgacaagttttaattgcatgatttatttgttgacttcctattttt 369  Q
    ||||||||| ||||||||||||||| ||||||||||||||||||||| || ||  || |||||||||||||||| ||||||||||| |||||||||||||    
T  4512160 aggaaaatgttatttctctagaaaaaatagcatcaagaatttttcaatactcaggtggcaagttttaattgcatcatttatttgtttacttcctattttt 4512259  T
Q  370 tagccacacctccttgaattgtagcaaatagtacattgtgattg 413  Q
     || |||| ||||||||||||| |||||||||| ||||||||||    
T  4512260 cagtcacatctccttgaattgtggcaaatagtatattgtgattg 4512303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 273 - 396
Target Start/End: Complemental strand, 41878715 - 41878592
Alignment:
Q  273 gaaaatgctatttctctagaaaaatagcatcaagaatttttcaagacacatttgacaagttttaattgcatgatttatttgttgacttcctattttttag 372  Q
    ||||||||||||| | |||||||||||||||||||||||||||||||| |  ||||||||||||||||||||||||||||||| ||||||||||||| ||    
T  41878715 gaaaatgctatttatttagaaaaatagcatcaagaatttttcaagacataactgacaagttttaattgcatgatttatttgtttacttcctatttttcag 41878616  T
Q  373 ccacacctccttgaattgtagcaa 396  Q
    ||||||||  ||||||||| ||||    
T  41878615 ccacaccttattgaattgtggcaa 41878592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 96 - 232
Target Start/End: Original strand, 51581458 - 51581595
Alignment:
Q  96 ggcattggataaaggaacaaaaatataaattttgtgttggaaaatgataaaaa-gtagttaaggcaacttgtaaaaagtttataaattgttgtttccaat 194  Q
    ||||||||||||||||||||||||| ||||||||||||||||| ||||||||| || || |||  |||||||||||  |||| |||||||||||| ||||    
T  51581458 ggcattggataaaggaacaaaaatagaaattttgtgttggaaagtgataaaaaagtggtcaagttaacttgtaaaacatttacaaattgttgttttcaat 51581557  T
Q  195 gtaaagctgctaattttggttaccttaaccattgccct 232  Q
    |||||||  |||||||||||||||||||||||||||||    
T  51581558 gtaaagcgactaattttggttaccttaaccattgccct 51581595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 99 - 231
Target Start/End: Complemental strand, 27628969 - 27628837
Alignment:
Q  99 attggataaaggaacaaaaatataaattttgtgttggaaaatgataaaaagtagttaaggcaacttgtaaaaagtttataaattgttgtttccaatgtaa 198  Q
    |||||||||| ||||||||||| |||  || |||||||||||||| |||||| || ||| ||||||||||||||||||||||||||||||| ||||||||    
T  27628969 attggataaaagaacaaaaataaaaaaattttgttggaaaatgattaaaagtggtcaagtcaacttgtaaaaagtttataaattgttgttttcaatgtaa 27628870  T
Q  199 agctgctaattttggttaccttaaccattgccc 231  Q
    |||| |||||| |||||||| ||||||||||||    
T  27628869 agctactaattctggttaccataaccattgccc 27628837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 99 - 227
Target Start/End: Complemental strand, 2804451 - 2804325
Alignment:
Q  99 attggataaaggaacaaaaatataaattttgtgttggaaaatgataaaaagtagttaaggcaacttgtaaaaagtttataaattgttgtttccaatgtaa 198  Q
    |||| ||||||||||||||||| |||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||| || |||  ||| |||    
T  2804451 attgaataaaggaacaaaaatagaaattttgtgttggaaaatgataaaaagtagtcaagtcaacttgtaaaaagtttataaattattattt--aatataa 2804354  T
Q  199 agctgctaattttggttaccttaaccatt 227  Q
    | || ||||||||| |||| |||||||||    
T  2804353 aactactaattttgcttacattaaccatt 2804325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 301 - 447
Target Start/End: Original strand, 26179238 - 26179385
Alignment:
Q  301 atcaagaatttttcaagacacatttgacaagttttaattgcatgatttatttgttgacttcctattttttagccacacctccttgaattgtagcaaatag 400  Q
    ||||||||||||| || |||||  || ||||||| ||||  |||||||||||||| ||||||||||||| |||||||||||||||||||||   ||||||    
T  26179238 atcaagaattttttaaaacacagctgtcaagtttcaatttgatgatttatttgttcacttcctatttttcagccacacctccttgaattgtgttaaatag 26179337  T
Q  401 tacattgtgattggttgctcttta-tcttgaagaattcttcatgttat 447  Q
    | || ||||||||| ||||||||| ||||||||||||||| |||||||    
T  26179338 tgcactgtgattggctgctctttattcttgaagaattcttaatgttat 26179385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 99 - 199
Target Start/End: Complemental strand, 33894178 - 33894078
Alignment:
Q  99 attggataaaggaacaaaaatataaattttgtgttggaaaatgataaaaagtagttaaggcaacttgtaaaaagtttataaattgttgtttccaatgtaa 198  Q
    |||||||||||||||||||||| |||||||||||| || | |||||||||||||| ||| ||| |||||||||||||||||||||||||||| |||||||    
T  33894178 attggataaaggaacaaaaataaaaattttgtgttagatagtgataaaaagtagtaaagtcaatttgtaaaaagtttataaattgttgtttcgaatgtaa 33894079  T
Q  199 a 199  Q
    |    
T  33894078 a 33894078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 272 - 425
Target Start/End: Original strand, 47838942 - 47839094
Alignment:
Q  272 ggaaaatgctatttctctagaaaaatagcatcaagaatttttcaagacacatttgacaagttttaattgcatgatttatttgttgacttcctatttttta 371  Q
    |||| |||||||||||||| ||||||||||||||||||||| |||||||||  ||   || |||||||||||||| | |||||| | || ||||||||      
T  47838942 ggaacatgctatttctctataaaaatagcatcaagaatttt-caagacacagctggtgagatttaattgcatgatgtttttgttcattttctatttttcg 47839040  T
Q  372 gccacacctccttgaattgtagcaaatagtacattgtgattggttgctctttat 425  Q
    ||||||||||||| |||||| ||||||||||||||||| |||  ||||||||||    
T  47839041 gccacacctccttaaattgtggcaaatagtacattgtggttgactgctctttat 47839094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 95 - 223
Target Start/End: Original strand, 26805681 - 26805809
Alignment:
Q  95 gggcattggataaaggaacaaaaatataaattttgtgttggaaaatgataaaaagtagttaaggcaacttgtaaaaagtttataaattgttgtttccaat 194  Q
    ||||||||||||| | | |||||||| |||  |  ||||| ||| || |||||||| || ||| || ||||||||||||||| |||||||||||||||||    
T  26805681 gggcattggataaggaagcaaaaatagaaaaatgatgttgaaaagtggtaaaaagtggtcaagtcagcttgtaaaaagtttaaaaattgttgtttccaat 26805780  T
Q  195 gtaaagctgctaattttggttaccttaac 223  Q
    |||||||| ||||||||||||||||||||    
T  26805781 gtaaagctactaattttggttaccttaac 26805809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 272 - 419
Target Start/End: Original strand, 54021241 - 54021391
Alignment:
Q  272 ggaaaatgctatttctctagaaaaatagcatcaagaatttttcaagacacatttgacaagttttaa---ttgcatgatttatttgttgacttcctatttt 368  Q
    |||||||| ||||||||||||||||||||||||||||||||| |||| | |  |||||||||||||   ||   || |||||||||| |||| |||||||    
T  54021241 ggaaaatgttatttctctagaaaaatagcatcaagaattttttaagataaagctgacaagttttaatttttaattgctttatttgtttactttctatttt 54021340  T
Q  369 ttagccacacctccttgaattgtagcaaatagtacattgtgattggttgct 419  Q
    | | |||||||||||| |||||| ||| ||||| |||||||||||| ||||    
T  54021341 tcaaccacacctccttaaattgtggcacatagtgcattgtgattggctgct 54021391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 329 - 447
Target Start/End: Original strand, 47281588 - 47281711
Alignment:
Q  329 aagttttaattgcatgatttatttgttgacttcctattttttagccacacctccttgaatt----gtagcaaatagtacattgtgattggttgctcttta 424  Q
    ||||||||||||||||||||||||||| ||||||||||||| | ||||||||||||||| |    || ||||||||| |||||||||| || | ||||||    
T  47281588 aagttttaattgcatgatttatttgttcacttcctatttttcaaccacacctccttgaaattaatgtggcaaatagtgcattgtgatttgtcgttcttta 47281687  T
Q  425 t-cttgaagaattcttcatgttat 447  Q
    | |||||||||||||| |||||||    
T  47281688 ttcttgaagaattcttgatgttat 47281711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 96 - 193
Target Start/End: Original strand, 29533537 - 29533632
Alignment:
Q  96 ggcattggataaaggaacaaaaatataaattttgtgttggaaaatgataaaaagtagttaaggcaacttgtaaaaagtttataaattgttgtttccaa 193  Q
    ||||||||||||| ||| |||| || ||||||| |||||||||||||||||||||||| ||| ||||||||||||||||||| |||||||||||||||    
T  29533537 ggcattggataaaagaataaaa-tagaaattttttgttggaaaatgataaaaagtagtcaagtcaacttgtaaaaagtttat-aattgttgtttccaa 29533632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 163 - 227
Target Start/End: Original strand, 49482972 - 49483036
Alignment:
Q  163 ttgtaaaaagtttataaattgttgtttccaatgtaaagctgctaattttggttaccttaaccatt 227  Q
    ||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||    
T  49482972 ttgtaaaaagtttataaattgttgttttcaatgtaaagctactaattttggttaccttaaccatt 49483036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 272 - 355
Target Start/End: Original strand, 41497890 - 41497975
Alignment:
Q  272 ggaaaatgctatttctctagaaaaatagcatcaagaatttttcaag--acacatttgacaagttttaattgcatgatttatttgtt 355  Q
    ||||||||||||||||||| |||||||||||||| |||| ||||||  ||||| |||| |||||||||||||||||||||||||||    
T  41497890 ggaaaatgctatttctctaaaaaaatagcatcaaaaattattcaagacacacagttgataagttttaattgcatgatttatttgtt 41497975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 100 - 220
Target Start/End: Original strand, 54357728 - 54357848
Alignment:
Q  100 ttggataaaggaacaaaaatataaattttgtgttggaaaatgataaaaagtagttaaggcaacttgtaaaaagtttataaattgttgtttccaatgtaaa 199  Q
    |||||||||| |||||||||| ||||  ||||||| ||| |||| |||||| || ||   ||||||||||||||||| |||||||| ||| |||||||||    
T  54357728 ttggataaagaaacaaaaataaaaataatgtgttgaaaagtgatgaaaagtggtcaaattaacttgtaaaaagtttacaaattgttcttttcaatgtaaa 54357827  T
Q  200 gctgctaattttggttacctt 220  Q
    | |  ||||||||||||||||    
T  54357828 gttattaattttggttacctt 54357848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 270 - 314
Target Start/End: Complemental strand, 52726074 - 52726030
Alignment:
Q  270 taggaaaatgctatttctctagaaaaatagcatcaagaatttttc 314  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  52726074 taggaaaatgctatttctctagaaaaatagcatcaagaatttttc 52726030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 99 - 196
Target Start/End: Complemental strand, 7031710 - 7031615
Alignment:
Q  99 attggataaaggaacaaaaatataaattttgtgttggaaaatgataaaaagtagttaaggcaacttgtaaaaagtttataaattgttgtttccaatgt 196  Q
    ||||||||| |||||||||||| |||| || ||||| ||| ||||||||||| || ||  |||||  || |||||||| || ||||||||||||||||    
T  7031710 attggataacggaacaaaaataaaaatattttgttgaaaagtgataaaaagtggtaaaatcaact--tataaagtttaaaatttgttgtttccaatgt 7031615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 274 - 307
Target Start/End: Complemental strand, 47282259 - 47282226
Alignment:
Q  274 aaaatgctatttctctagaaaaatagcatcaaga 307  Q
    ||||||||||||||||||||||||||||||||||    
T  47282259 aaaatgctatttctctagaaaaatagcatcaaga 47282226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 276 - 318
Target Start/End: Original strand, 24683080 - 24683122
Alignment:
Q  276 aatgctatttctctagaaaaatagcatcaagaatttttcaaga 318  Q
    |||||||| |||||||||||||| ||||||||||| |||||||    
T  24683080 aatgctatatctctagaaaaataacatcaagaattcttcaaga 24683122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 387 - 447
Target Start/End: Complemental strand, 41878406 - 41878345
Alignment:
Q  387 attgtagcaaatagtacattgtgattggttgctcttta-tcttgaagaattcttcatgttat 447  Q
    ||||||||||||||| |||||||||||| || |||||| || |||||||||| | |||||||    
T  41878406 attgtagcaaatagtgcattgtgattggctgatctttattcatgaagaattcatgatgttat 41878345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 118; Significance: 8e-60; HSPs: 39)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 118; E-Value: 8e-60
Query Start/End: Original strand, 271 - 447
Target Start/End: Complemental strand, 1270372 - 1270195
Alignment:
Q  271 aggaaaatgctatttctctagaaaaatagcatcaagaatttttcaagacacatttgacaagttttaattgcatgatttatttgttgacttcctatttttt 370  Q
    |||||| | |||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||| ||||||||| || |||||||||||||     
T  1270372 aggaaactactatttctctagaaaaatagcatcaaaaatttttcaagacacagttgacaagttttaattgcacgatttatttattcacttcctatttttc 1270273  T
Q  371 agccacacctccttgaattgtagcaaatagtacattgtgattggttgctcttta-tcttgaagaattcttcatgttat 447  Q
    |||||||||| |||||||||| ||||||||| ||||| |||||||||||||||| ||||||||||||||| |||||||    
T  1270272 agccacaccttcttgaattgtggcaaatagtgcattgagattggttgctctttattcttgaagaattcttgatgttat 1270195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 268 - 447
Target Start/End: Complemental strand, 34476103 - 34475923
Alignment:
Q  268 tttaggaaaatgctatttctctagaaaaatagcatcaagaatttttcaagacacatttgacaagttttaattgcatgatttatttgttgacttcctattt 367  Q
    |||||||||| ||||||||||||||||||||| |||||||||||||||||||| |  ||||||||||||||||||||||| ||||||| |||||||||||    
T  34476103 tttaggaaaaggctatttctctagaaaaatagtatcaagaatttttcaagacaaagctgacaagttttaattgcatgattgatttgttcacttcctattt 34476004  T
Q  368 tttagccacacctccttgaattgtagcaaatagtacattgtgattggttgctcttta-tcttgaagaattcttcatgttat 447  Q
    || ||||||||||||||||||||  ||| ||||| |||||||||||| ||||||||| ||||||||||||||| |||||||    
T  34476003 ttcagccacacctccttgaattggggcagatagtgcattgtgattggctgctctttattcttgaagaattcttgatgttat 34475923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 270 - 439
Target Start/End: Original strand, 31032694 - 31032864
Alignment:
Q  270 taggaaaatgctatttctctagaaaaatagcatcaagaatttttcaagacacatttgacaagttttaattgcatgatttatttgttgacttcctattttt 369  Q
    |||||||||| ||||| |||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| |||| ||||||||    
T  31032694 taggaaaatgttatttttctagaaaaatagcatcaagaatttttcaagatacagttgacaagttttaattgcatgatttatttgttcactttctattttt 31032793  T
Q  370 tagccacacctccttgaattgtagcaaatagtacattgtgattggttgctcttta-tcttgaagaattctt 439  Q
     ||||||||||||||||| ||| ||||||||| |||||||||||  || |||||| |||||||||||||||    
T  31032794 cagccacacctccttgaactgtggcaaatagtgcattgtgattgactgatctttattcttgaagaattctt 31032864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 108; E-Value: 7e-54
Query Start/End: Original strand, 281 - 447
Target Start/End: Original strand, 29095530 - 29095697
Alignment:
Q  281 tatttctctagaaaaatagcatcaagaatttttcaagacacatttgacaagttttaattgcatgatttatttgttgacttcctattttttagccacacct 380  Q
    ||||||||||||||||||||||||| || ||||||||||| | ||| ||||||||||||||||||| | |||||| ||||||||||||| ||||||||||    
T  29095530 tatttctctagaaaaatagcatcaaaaaattttcaagacatagttgccaagttttaattgcatgatatctttgttcacttcctatttttcagccacacct 29095629  T
Q  381 ccttgaattgtagcaaatagtacattgtgattggttgctcttta-tcttgaagaattcttcatgttat 447  Q
    ||||||||||| ||||||||| |||||||||||| ||||||||| ||||||||||||||| |||||||    
T  29095630 ccttgaattgtggcaaatagtgcattgtgattggctgctctttattcttgaagaattcttgatgttat 29095697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 92 - 231
Target Start/End: Complemental strand, 48034012 - 48033873
Alignment:
Q  92 ttggggcattggataaaggaacaaaaatataaattttgtgttggaaaatgataaaaagtagttaaggcaacttgtaaaaagtttataaattgttgtttcc 191  Q
    |||||||||| |||||||||||||||||| |||||||||||||||||| ||  |||||| || ||| |||||||||||||||||||||||||||||||||    
T  48034012 ttggggcattagataaaggaacaaaaatagaaattttgtgttggaaaaagaagaaaagtggtcaagccaacttgtaaaaagtttataaattgttgtttcc 48033913  T
Q  192 aatgtaaagctgctaattttggttaccttaaccattgccc 231  Q
    ||||||||||| ||||||||||||||||||||||||||||    
T  48033912 aatgtaaagctactaattttggttaccttaaccattgccc 48033873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 271 - 439
Target Start/End: Complemental strand, 16255055 - 16254886
Alignment:
Q  271 aggaaaatgctatttctctagaaaaatagcatcaagaatttttcaagacacatttgacaagttttaattgcatgatttatttgttgacttcctatttttt 370  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||  ||||||  |||||||| |||||||||||||| |||||||||| ||     
T  16255055 aggaaaatgctatttctctagaaaaatagcatcaagaatttttcaatacacaactgacaaaatttaattgtatgatttatttgttcacttcctattattc 16254956  T
Q  371 agccacacctccttgaattgtagcaaatagtacattgtgattggttgctcttta-tcttgaagaattctt 439  Q
    |||||||||||||| |||| | ||||||||| |||||||||||| || |||||| |||||||||||||||    
T  16254955 agccacacctccttaaattatggcaaatagtgcattgtgattggctgatctttattcttgaagaattctt 16254886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 93; E-Value: 7e-45
Query Start/End: Original strand, 273 - 425
Target Start/End: Complemental strand, 47550990 - 47550838
Alignment:
Q  273 gaaaatgctatttctctagaaaaatagcatcaagaatttttcaagacacatttgacaagttttaattgcatgatttatttgttgacttcctattttttag 372  Q
    ||||||| |||||||||||||||||||||||||||||||||||||| |||  || ||||||||||||||||||||||| |||| | ||||||||||||||    
T  47550990 gaaaatgttatttctctagaaaaatagcatcaagaatttttcaagaaacagctggcaagttttaattgcatgatttatatgttcatttcctattttttag 47550891  T
Q  373 ccacacctccttgaattgtagcaaatagtacattgtgattggttgctctttat 425  Q
     ||||||||||| |||||| ||||||||| |||||| ||| | ||||||||||    
T  47550890 tcacacctccttaaattgtggcaaatagtgcattgtaatttgctgctctttat 47550838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 275 - 447
Target Start/End: Original strand, 9098571 - 9098741
Alignment:
Q  275 aaatgctatttctctagaaaaatagcatcaagaatttttcaagacacatttgacaagttttaattgcatgatttatttgttgacttcctattttttagcc 374  Q
    ||||||| |||||||||||||||||||||||||||||||||| |||||  ||||||||||||||||||||||||||||||| ||||| |||| || ||||    
T  9098571 aaatgctttttctctagaaaaatagcatcaagaatttttcaaaacacagctgacaagttttaattgcatgatttatttgttcacttcgtattattcagcc 9098670  T
Q  375 acacctccttgaattgtagcaaatagtacattgtgattggttgctcttta-tcttgaagaattcttcatgttat 447  Q
    |||||| ||||||   | ||| ||||| |||||||||||| ||||||||| |||| |||||||||| |||||||    
T  9098671 acaccttcttgaa---tggcagatagtgcattgtgattggctgctctttattcttaaagaattcttgatgttat 9098741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 71 - 232
Target Start/End: Original strand, 39873293 - 39873455
Alignment:
Q  71 ggaaaatgctaaccaatacttttggggcattggataaaggaacaaaaatataaattttgtgttggaaaatgataaaaagtagttaaggcaacttgtaaaa 170  Q
    |||||||| |||||| | | |||| || |||| ||||||||||||||||| ||||||| |||||||||||||||||||||||| ||| ||||||||||||    
T  39873293 ggaaaatgttaaccattgcctttgaggtattgaataaaggaacaaaaatagaaattttatgttggaaaatgataaaaagtagtcaagtcaacttgtaaaa 39873392  T
Q  171 agtttataaattgttgtttccaatg-taaagctgctaattttggttaccttaaccattgccct 232  Q
    | ||||||||||||||||||||||| |||| ||  |||||||||||||||||| |||||||||    
T  39873393 aatttataaattgttgtttccaatgttaaaactattaattttggttaccttaatcattgccct 39873455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 271 - 447
Target Start/End: Complemental strand, 20809148 - 20808971
Alignment:
Q  271 aggaaaatgctatttctctagaaaaatagcatcaagaatttttcaagacacatttgacaagttttaattgcatgatttatttgttgacttcctatttttt 370  Q
    ||||||||  |||||||||||||||||||||||||||||||||||||| ||   || |||||||||||| |||| |||||| ||| |||||||| ||||     
T  20809148 aggaaaattttatttctctagaaaaatagcatcaagaatttttcaagatacgggtggcaagttttaattacatggtttattcgttcacttcctagttttc 20809049  T
Q  371 agccacacctccttgaattgtagcaaatagtacattgtgattggttgctcttta-tcttgaagaattcttcatgttat 447  Q
    ||||||| ||||||||||||| ||||||| | |||||||||||  ||||||||| ||||||||||||||| |||||||    
T  20809048 agccacatctccttgaattgtggcaaataatgcattgtgattgactgctctttattcttgaagaattcttgatgttat 20808971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 97 - 232
Target Start/End: Original strand, 2351223 - 2351358
Alignment:
Q  97 gcattggataaaggaacaaaaatataaattttgtgttggaaaatgataaaaagtagttaaggcaacttgtaaaaagtttataaattgttgtttccaatgt 196  Q
    ||||||||||||| |||||||||| ||||||||||||| ||||||||||||| | || ||| |||||| ||||||||||| |||||||||||||||||||    
T  2351223 gcattggataaagaaacaaaaataaaaattttgtgttgaaaaatgataaaaaatggtcaagtcaacttataaaaagtttacaaattgttgtttccaatgt 2351322  T
Q  197 aaagctgctaattttggttaccttaaccattgccct 232  Q
    ||| ||  |||||||||||||||||||||| |||||    
T  2351323 aaacctattaattttggttaccttaaccatagccct 2351358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 97 - 228
Target Start/End: Complemental strand, 4551171 - 4551040
Alignment:
Q  97 gcattggataaaggaacaaaaatataaattttgtgttggaaaatgataaaaagtagttaaggcaacttgtaaaaagtttataaattgttgtttccaatgt 196  Q
    ||||||||||| |||||||||||| |||||||||||||||||||||| |||||| || ||| | ||||||||||||||||||||||||||||| | ||||    
T  4551171 gcattggataatggaacaaaaatagaaattttgtgttggaaaatgatgaaaagtggtcaagtcgacttgtaaaaagtttataaattgttgtttacgatgt 4551072  T
Q  197 aaagctgctaattttggttaccttaaccattg 228  Q
    ||||||  ||||||||||||||||||| ||||    
T  4551071 aaagctattaattttggttaccttaactattg 4551040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 96 - 230
Target Start/End: Original strand, 37275260 - 37275394
Alignment:
Q  96 ggcattggataaaggaacaaaaatataaattttgtgttggaaaatgataaaaagtagttaaggcaacttgtaaaaagtttataaattgttgtttccaatg 195  Q
    ||||||||||||||| ||||||||| ||||||||| ||||||||||||||||| | || ||| |||||| ||||||||||||||||||||||||||||||    
T  37275260 ggcattggataaaggtacaaaaatagaaattttgtattggaaaatgataaaaaatggtcaagacaacttataaaaagtttataaattgttgtttccaatg 37275359  T
Q  196 taaagctgctaattttggttaccttaaccattgcc 230  Q
    |||| ||  |||||||| ||||||||| |||||||    
T  37275360 taaaactaataattttgattaccttaagcattgcc 37275394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 271 - 447
Target Start/End: Complemental strand, 45010400 - 45010224
Alignment:
Q  271 aggaaaatgctatttctctagaaaaatagcatcaagaatttttcaagacacatttgacaagttttaattgcatgatttatttgttgacttcctatttttt 370  Q
    ||||| ||| |||||||||||||||||||||| ||||||||||||| |||||| |||||| |||||||||||||||||||||||| ||||| |||||||     
T  45010400 aggaagatgttatttctctagaaaaatagcataaagaatttttcaaaacacatctgacaaattttaattgcatgatttatttgttcacttcttatttttc 45010301  T
Q  371 agccacacctccttgaattgtagcaaatagtacattgtgattggttgctcttta-tcttgaagaattcttcatgttat 447  Q
    |||||||||| | ||||||||  |||||| | |||| |  |||| ||||||||| |||| |||||||||| |||||||    
T  45010300 agccacaccttc-tgaattgtgacaaataatgcattatatttggatgctctttattcttaaagaattcttgatgttat 45010224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 72 - 217
Target Start/End: Original strand, 38680882 - 38681027
Alignment:
Q  72 gaaaatgctaaccaatacttttggggcattggataaaggaacaaaaatataaattttgtgttggaaaatgataaaaagtagttaaggcaacttgtaaaaa 171  Q
    |||||||||||||| | || |||||||||||||||||||||||  |||| ||||||||||||||||||| ||||||| | || |||  || |||||||||    
T  38680882 gaaaatgctaaccattgctcttggggcattggataaaggaacatcaataaaaattttgtgttggaaaataataaaaaattgtcaagttaatttgtaaaaa 38680981  T
Q  172 gtttataaattgttgtttccaatgtaaagctgctaattttggttac 217  Q
     ||||||||||||||||||||||||||| ||  |||||||||||||    
T  38680982 atttataaattgttgtttccaatgtaaaactaataattttggttac 38681027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 271 - 447
Target Start/End: Complemental strand, 42480324 - 42480145
Alignment:
Q  271 aggaaaatgctatttctctagaaaaatagcatcaagaatttttcaagacacatttga--caagttttaattgcatgatttatttgttgacttcctatttt 368  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||| |||    |  |||||||||||||||| |||||||| || | || |||||||    
T  42480324 aggaaaatgttatttctctagaaaaatagcatcaagaatttttcaagagacacagcatgcaagttttaattgcataatttatttattcattttctatttt 42480225  T
Q  369 ttagccacacctccttgaattgtagcaaatagtacattgtgattggttgctcttta-tcttgaagaattcttcatgttat 447  Q
    | ||||||||||| ||||||||| | ||||| |||||||| ||||  |||| |||| ||||||||||||||| |||||||    
T  42480224 tcagccacacctcattgaattgtggtaaataatacattgtaattgactgctatttattcttgaagaattcttgatgttat 42480145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 96 - 223
Target Start/End: Complemental strand, 30111877 - 30111750
Alignment:
Q  96 ggcattggataaaggaacaaaaatataaattttgtgttggaaaatgataaaaagtagttaaggcaacttgtaaaaagtttataaattgttgtttccaatg 195  Q
    |||||||||||| |||||||||||| ||||||||||| ||||||||||||||||| || ||| |||||| |||||| |||| ||||||||||||| |||     
T  30111877 ggcattggataagggaacaaaaatacaaattttgtgtcggaaaatgataaaaagtggtcaagtcaacttataaaaaatttacaaattgttgtttctaata 30111778  T
Q  196 taaagctgctaattttggttaccttaac 223  Q
    |||| || ||||||||||||||||||||    
T  30111777 taaaactactaattttggttaccttaac 30111750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 99 - 233
Target Start/End: Original strand, 3077048 - 3077182
Alignment:
Q  99 attggataaaggaacaaaaatataaattttgtgttggaaaatgataaaaagtagttaaggcaacttgtaaaaagtttataaattgttgtttccaatgtaa 198  Q
    |||||||||||||| ||||||| ||||||||||||||||||| ||||||||| || ||   |||||||||||| |||||||||| |||||| ||||||||    
T  3077048 attggataaaggaataaaaatagaaattttgtgttggaaaataataaaaagtggtcaaattaacttgtaaaaaatttataaattattgtttacaatgtaa 3077147  T
Q  199 agctgctaattttggttaccttaaccattgccctc 233  Q
    || | |||||||| |||||||||||||||| ||||    
T  3077148 agttactaattttagttaccttaaccattgtcctc 3077182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 332 - 447
Target Start/End: Complemental strand, 24135893 - 24135779
Alignment:
Q  332 ttttaattgcatgatttatttgttgacttcctattttttagccacacctccttgaattgtagcaaatagtacattgtgattggttgctcttta-tcttga 430  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| ||||||  | |||||||||||| ||||||||| ||||||    
T  24135893 ttttaattgcatgatttatttgttcacttcctatttttcagccacacctccttgaattgtggcaaat--tgcattgtgattggctgctctttattcttga 24135796  T
Q  431 agaattcttcatgttat 447  Q
    ||||||||| |||||||    
T  24135795 agaattcttgatgttat 24135779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 96 - 242
Target Start/End: Original strand, 15177023 - 15177169
Alignment:
Q  96 ggcattggataaaggaacaaaaatataaattttgtgttggaaaatgataaaaagtagttaaggcaacttgtaaaaagtttataaattgttgtttccaatg 195  Q
    |||||||||||||| |||||||||| ||||||||||||| | ||||||||||| | ||||||  |||||||||||| ||||||||| ||||||| ||||     
T  15177023 ggcattggataaagaaacaaaaataaaaattttgtgttgaacaatgataaaaaatggttaagttaacttgtaaaaaatttataaatcgttgttttcaata 15177122  T
Q  196 taaagctgctaattttggttaccttaaccattgccctcacggtaatg 242  Q
    || | ||  ||||||| |||||||||||||||| ||||| |||||||    
T  15177123 tataactattaattttagttaccttaaccattgtcctcagggtaatg 15177169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 287 - 416
Target Start/End: Original strand, 2958710 - 2958834
Alignment:
Q  287 tctagaaaaatagcatcaagaatttttcaagacacatttgacaagttttaattgcatgatttatttgttgacttcctattttttagccacacctccttga 386  Q
    |||||||||||| |||||||||||||||||||||||  || ||     ||||||||||||||||||||| ||| ||||||||| ||||||||||||||||    
T  2958710 tctagaaaaataacatcaagaatttttcaagacacagctggca-----taattgcatgatttatttgttcactccctatttttcagccacacctccttga 2958804  T
Q  387 attgtagcaaatagtacattgtgattggtt 416  Q
    ||| | ||||||||| ||||||||||||||    
T  2958805 attttggcaaatagtgcattgtgattggtt 2958834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 74 - 211
Target Start/End: Original strand, 12482354 - 12482490
Alignment:
Q  74 aaatgctaaccaatacttttggggcattggataaaggaacaaaaatataaattttgtgttggaaaatgataaaaagtagttaaggcaacttgtaaaaagt 173  Q
    ||||||||||||   ||||||||  |||||||||||||||||||||| |||||||||||||||||||||||||||||  | ||  |||||||||||||||    
T  12482354 aaatgctaaccatggcttttgggatattggataaaggaacaaaaataaaaattttgtgttggaaaatgataaaaagtgatcaaatcaacttgtaaaaagt 12482453  T
Q  174 ttataaattgttgtttccaatgtaaagctgctaatttt 211  Q
    ||| ||||||||||||  |||||||| || ||||||||    
T  12482454 tta-aaattgttgtttttaatgtaaaactactaatttt 12482490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 272 - 425
Target Start/End: Original strand, 44714807 - 44714960
Alignment:
Q  272 ggaaaatgctatttctctagaaaaatagcatcaagaatttttcaagacacatttgacaagttttaattgcatgatttatttgttgacttcctatttttta 371  Q
    |||||||| ||||| ||||||||||||| |||||||||||||||||| | | ||| ||||||||||||| ||||||||||| || | ||  ||||||| |    
T  44714807 ggaaaatgttatttttctagaaaaatagtatcaagaatttttcaagatatagttggcaagttttaattgtatgatttatttttttattttttatttttca 44714906  T
Q  372 gccacacctccttgaattgtagcaaatagtacattgtgattggttgctctttat 425  Q
    |||||| ||| ||||||||| ||||||| | |||||||||||  ||||||||||    
T  44714907 gccacatctcgttgaattgtggcaaataatgcattgtgattgactgctctttat 44714960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 74 - 230
Target Start/End: Complemental strand, 26060322 - 26060163
Alignment:
Q  74 aaatgctaaccaatacttttggggcattggataaaggaacaaaaatataaattttgtgttggaaaatgataaaaa----gtagttaaggcaacttgtaaa 169  Q
    |||||||||||| | |  |||| ||||||||||| | || ||||||| ||||||| || || |||||||||||||    || || ||  |||||||||||    
T  26060322 aaatgctaaccattgcccttggagcattggataa-gaaataaaaatagaaattttatgctgaaaaatgataaaaaaaaagtggtcaaatcaacttgtaaa 26060224  T
Q  170 aagtttataaattgttgtttccaatgtaaagctgctaattttggttaccttaaccattgcc 230  Q
    |||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||    
T  26060223 aagtttataaattgttgtttccaatgtaaaactactaattttggttaccttaaccattgcc 26060163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 271 - 379
Target Start/End: Complemental strand, 4624539 - 4624438
Alignment:
Q  271 aggaaaatgctatttctctagaaaaatagcatcaagaatttttcaagacacatttgacaagttttaattgcatgatttatttgttgacttcctatttttt 370  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||        |||||||||||||||||||||||||||| |||||||||||||     
T  4624539 aggaaaatgctatttctctagaaaaatagcatcaagaattattcaagac-------tcaagttttaattgcatgatttatttgttcacttcctatttttc 4624447  T
Q  371 agccacacc 379  Q
    |||||||||    
T  4624446 agccacacc 4624438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 274 - 447
Target Start/End: Complemental strand, 34808134 - 34807960
Alignment:
Q  274 aaaatgctatttctctagaaaaatagcatcaagaatttttcaagacacatttgacaagttttaattgcatgatttatttgttgacttcctattttttagc 373  Q
    |||||| ||||||| |||||||||||||| |    |||||||||| |||  |  ||||||||||||||||||||||||| || ||||| ||||||| |||    
T  34808134 aaaatgttatttctttagaaaaatagcataatttttttttcaagagacaactagcaagttttaattgcatgatttatttattcacttcatatttttcagc 34808035  T
Q  374 cacacctccttgaattgtagcaaatagtacattgtgattggttgctcttta-tcttgaagaattcttcatgttat 447  Q
    ||||||||||| |||| |   |||||||||||||||||||  ||||||||| | ||||||||||||| |||||||    
T  34808034 cacacctccttaaattatgataaatagtacattgtgattgactgctctttatttttgaagaattcttgatgttat 34807960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 275 - 343
Target Start/End: Complemental strand, 41647424 - 41647356
Alignment:
Q  275 aaatgctatttctctagaaaaatagcatcaagaatttttcaagacacatttgacaagttttaattgcat 343  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  41647424 aaatgctatttctctagaaaaatagcatcaagaatttttcaagacacagttgacaagttttaattgcat 41647356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 105 - 189
Target Start/End: Complemental strand, 32512167 - 32512083
Alignment:
Q  105 taaaggaacaaaaatataaattttgtgttggaaaatgataaaaagtagttaaggcaacttgtaaaaagtttataaattgttgttt 189  Q
    |||||||||||||||| |||||||||||||||||||||||||||||  | ||| ||||||||||||| |||||||||||||||||    
T  32512167 taaaggaacaaaaatagaaattttgtgttggaaaatgataaaaagtgatcaagtcaacttgtaaaaattttataaattgttgttt 32512083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 96 - 243
Target Start/End: Complemental strand, 8904075 - 8903930
Alignment:
Q  96 ggcattggataaaggaacaaaaatataaattttgtgttggaaaatgataaaaagtagttaaggcaacttgtaaaaagtttataaattgttgtttccaatg 195  Q
    ||||||||||| | ||||||||||| ||||||||||||| |||||||||||||  |  |||  ||||||||||||| || ||||||| |||||| ||||     
T  8904075 ggcattggatatatgaacaaaaataaaaattttgtgttgaaaaatgataaaaataa--taaatcaacttgtaaaaaattaataaattattgttttcaata 8903978  T
Q  196 taaagctgctaattttggttaccttaaccattgccctcacggtaatga 243  Q
    |||||||  ||||||| ||||||||||  ||||||||||  |||||||    
T  8903977 taaagctattaatttttgttaccttaatgattgccctcagagtaatga 8903930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 98 - 211
Target Start/End: Original strand, 4081205 - 4081318
Alignment:
Q  98 cattggataaaggaacaaaaatataaattttgtgttggaaaatgataaaaagtagttaaggcaacttgtaaaaagtttataaattgttgtttccaatgta 197  Q
    |||||||||||| |||||||||| ||||| ||||||||||| |||| |||||| || |||  || || |||||||||| ||||||||| |||||||||||    
T  4081205 cattggataaagaaacaaaaatagaaattatgtgttggaaagtgatgaaaagtggtcaagtaaatttataaaaagtttttaaattgttatttccaatgta 4081304  T
Q  198 aagctgctaatttt 211  Q
    ||  ||||||||||    
T  4081305 aaattgctaatttt 4081318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 99 - 227
Target Start/End: Complemental strand, 21029421 - 21029295
Alignment:
Q  99 attggataaaggaacaaaaatataaattttgtgttggaaaatgataaaaagtagttaaggcaacttgtaaaaagtttataaattgttgtttccaatgtaa 198  Q
    ||||||| ||| |||||||||| |||||  | |||||||| |||||||||||  | ||| |||||| ||||| ||||||||||| |||||| ||||||||    
T  21029421 attggatgaagaaacaaaaataaaaatt--gcgttggaaagtgataaaaagttatcaagtcaacttataaaatgtttataaattattgttttcaatgtaa 21029324  T
Q  199 agctgctaattttggttaccttaaccatt 227  Q
    | || |||||||| |||||||||| ||||    
T  21029323 aactactaatttttgttaccttaaacatt 21029295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 159 - 230
Target Start/End: Original strand, 16109874 - 16109945
Alignment:
Q  159 caacttgtaaaaagtttataaattgttgtttccaatgtaaagctgctaattttggttaccttaaccattgcc 230  Q
    |||||||||||||||||| || ||||| ||| |||||||||||| |||||| || |||| ||||||||||||    
T  16109874 caacttgtaaaaagtttacaagttgttattttcaatgtaaagctactaattgtgtttactttaaccattgcc 16109945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 318 - 413
Target Start/End: Original strand, 27143603 - 27143698
Alignment:
Q  318 acacatttgacaagttttaattgcatgatttatttgttgacttcctattttttagccacacctccttgaattgtagcaaatagtacattgtgattg 413  Q
    ||||| ||| ||||| || |||| || || |||||||| ||||||||||||| |  |||||||| || |||||||||||||| |||||||||||||    
T  27143603 acacagttggcaagtgtttattgtattatgtatttgtttacttcctatttttcaatcacacctctttaaattgtagcaaataatacattgtgattg 27143698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 347 - 447
Target Start/End: Complemental strand, 4194891 - 4194790
Alignment:
Q  347 ttatttgttgacttcctattttttagccacacctccttgaattgtagcaaatagtacattgtgattggttgctcttta-tcttgaagaattcttcatgtt 445  Q
    ||||||||| ||||||||||||| || || | ||| ||||||| | | |||||||| ||||||||||  || |||||| ||||||||||||||| |||||    
T  4194891 ttatttgttcacttcctatttttcagtcatatctctttgaattatggtaaatagtatattgtgattgactgttctttattcttgaagaattcttgatgtt 4194792  T
Q  446 at 447  Q
    ||    
T  4194791 at 4194790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 160 - 223
Target Start/End: Complemental strand, 46065379 - 46065316
Alignment:
Q  160 aacttgtaaaaagtttataaattgttgtttccaatgtaaagctgctaattttggttaccttaac 223  Q
    |||||||||||| |||| |||| |||||||||||| |||||||  |||| ||||||||||||||    
T  46065379 aacttgtaaaaaatttaaaaatcgttgtttccaatataaagctattaatcttggttaccttaac 46065316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 276 - 318
Target Start/End: Original strand, 1270175 - 1270217
Alignment:
Q  276 aatgctatttctctagaaaaatagcatcaagaatttttcaaga 318  Q
    |||||||| |||||||||||||| ||||||||||| |||||||    
T  1270175 aatgctatatctctagaaaaataacatcaagaattcttcaaga 1270217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 276 - 318
Target Start/End: Original strand, 4194770 - 4194812
Alignment:
Q  276 aatgctatttctctagaaaaatagcatcaagaatttttcaaga 318  Q
    |||||||| |||||||||||||| ||||||||||| |||||||    
T  4194770 aatgctatatctctagaaaaataacatcaagaattcttcaaga 4194812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 276 - 318
Target Start/End: Original strand, 20808951 - 20808993
Alignment:
Q  276 aatgctatttctctagaaaaatagcatcaagaatttttcaaga 318  Q
    |||||||| |||||||||||||| ||||||||||| |||||||    
T  20808951 aatgctatatctctagaaaaataacatcaagaattcttcaaga 20808993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 276 - 318
Target Start/End: Original strand, 34475903 - 34475945
Alignment:
Q  276 aatgctatttctctagaaaaatagcatcaagaatttttcaaga 318  Q
    |||||||| |||||||||||||| ||||||||||| |||||||    
T  34475903 aatgctatatctctagaaaaataacatcaagaattcttcaaga 34475945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 116; Significance: 1e-58; HSPs: 20)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 269 - 447
Target Start/End: Original strand, 23991946 - 23992125
Alignment:
Q  269 ttaggaaaatgctatttctctagaaaaatagcatcaagaatttttcaagacacatttgacaagttttaattgcatgatttatttgttgacttcctatttt 368  Q
    |||||||||||||||||||||||||| |||| ||||||||||||||||||||||  |||||||||||||||||||||| | |||||| |||| |||||||    
T  23991946 ttaggaaaatgctatttctctagaaacatagtatcaagaatttttcaagacacaactgacaagttttaattgcatgatatttttgttcactttctatttt 23992045  T
Q  369 ttagccacacctccttgaattgtagcaaatagtacattgtgattggttgctcttta-tcttgaagaattcttcatgttat 447  Q
    | ||||||||||||||||||||| ||||||||| ||||||||| || ||||||||| ||||||||||||||| |||||||    
T  23992046 tcagccacacctccttgaattgtggcaaatagtgcattgtgataggctgctctttattcttgaagaattcttgatgttat 23992125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 97 - 232
Target Start/End: Complemental strand, 39321278 - 39321141
Alignment:
Q  97 gcattggataaaggaacaaaaatataaattttgtgttggaaaatgataaaaag--tagttaaggcaacttgtaaaaagtttataaattgttgtttccaat 194  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||   |||| ||  ||||||||||||||||||||||||||||||||||||    
T  39321278 gcattggataaaggaacaaaaatataaattttgtgttggaaaatgataaaaaaaatagtcaaatcaacttgtaaaaagtttataaattgttgtttccaat 39321179  T
Q  195 gtaaagctgctaattttggttaccttaaccattgccct 232  Q
    |||||||| |||||||||||||||||||||||||||||    
T  39321178 gtaaagctactaattttggttaccttaaccattgccct 39321141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 73 - 228
Target Start/End: Complemental strand, 3408321 - 3408166
Alignment:
Q  73 aaaatgctaaccaatacttttggggcattggataaaggaacaaaaatataaattttgtgttggaaaatgataaaaagtagttaaggcaacttgtaaaaag 172  Q
    ||||||||||||| | || ||||| ||||| ||||| ||||||||||| ||||||||||||| |||||||||||||||||| ||| ||||||||||||||    
T  3408321 aaaatgctaaccattgctcttgggacattgaataaaagaacaaaaatagaaattttgtgttgaaaaatgataaaaagtagtcaagtcaacttgtaaaaag 3408222  T
Q  173 tttataaattgttgtttccaatgtaaagctgctaattttggttaccttaaccattg 228  Q
    || ||||||||||||||||||||||||||| |||||||||| ||||||||||||||    
T  3408221 ttaataaattgttgtttccaatgtaaagctactaattttggctaccttaaccattg 3408166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 95 - 232
Target Start/End: Original strand, 16492022 - 16492159
Alignment:
Q  95 gggcattggataaaggaacaaaaatataaattttgtgttggaaaatgataaaaagtagttaaggcaacttgtaaaaagtttataaattgttgtttccaat 194  Q
    ||||||||||||||||||||||| || |||||||||||| ||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  16492022 gggcattggataaaggaacaaaactagaaattttgtgttagaaaatgataaaaagtagtcaagtcaacttgtaaaaagtttataaattgttgtttccaat 16492121  T
Q  195 gtaaagctgctaattttggttaccttaaccattgccct 232  Q
    |||||| | ||||||| ||||||||||| |||||||||    
T  16492122 gtaaagttactaatttcggttaccttaatcattgccct 16492159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 74 - 229
Target Start/End: Complemental strand, 44207765 - 44207609
Alignment:
Q  74 aaatgctaaccaatacttttggggcattggataaaggaacaaaaatataaattttgtgttggaaaa-tgataaaaagtagttaaggcaacttgtaaaaag 172  Q
    |||||||||||| | |  ||| ||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||| ||| ||||||||||||      
T  44207765 aaatgctaaccattgcccttgtggcattggataaaggaacaaaaatagaaattttgtgttggaaaaatgataaaaagtagtcaagtcaacttgtaaaatt 44207666  T
Q  173 tttataaattgttgtttccaatgtaaagctgctaattttggttaccttaaccattgc 229  Q
    |||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||    
T  44207665 tttataaattgttgtttccaatataaagctactaattttggttaccttaaccattgc 44207609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 293 - 447
Target Start/End: Original strand, 27425773 - 27425928
Alignment:
Q  293 aaaatagcatcaagaatttttcaagacacatttgacaagttttaattgcatgatttatttgttgacttcctattttttagccacacctccttgaattgta 392  Q
    ||||||||||||| |||||||||||||||| ||| |||||||||||||||||||||||||||| ||||||||||||| | ||||| |||||||||||||     
T  27425773 aaaatagcatcaacaatttttcaagacacagttggcaagttttaattgcatgatttatttgttcacttcctatttttcaaccacaactccttgaattgtg 27425872  T
Q  393 gcaaatagtacattgtgattggttgctcttta-tcttgaagaattcttcatgttat 447  Q
    ||||||| | |||||||||||  || |||||| |||| |||||||||| |||||||    
T  27425873 gcaaataatgcattgtgattgactgttctttattctttaagaattcttgatgttat 27425928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 93 - 233
Target Start/End: Complemental strand, 10981053 - 10980913
Alignment:
Q  93 tggggcattggataaaggaacaaaaatataaattttgtgttggaaaatgataaaaagtagttaaggcaacttgtaaaaagtttataaattgttgtttcca 192  Q
    |||| |||||||||||| |||||||||  |||| ||||||||||||||||||||||||| | ||| |||||||||||||||||||||||| |||||| ||    
T  10981053 tgggtcattggataaagaaacaaaaatgaaaatgttgtgttggaaaatgataaaaagtactcaagtcaacttgtaaaaagtttataaattattgttttca 10980954  T
Q  193 atgtaaagctgctaattttggttaccttaaccattgccctc 233  Q
    |||||||| | ||||||||||||  ||||||||||||||||    
T  10980953 atgtaaagatactaattttggttgtcttaaccattgccctc 10980913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 309 - 447
Target Start/End: Complemental strand, 17612005 - 17611866
Alignment:
Q  309 tttttcaagacacatttgacaagttttaattgcatgatttatttgttgacttcctattttttagccacacctccttgaattgtagcaaatagtacattgt 408  Q
    ||||| ||||||||  |||||||||||||||| ||||||||||| || ||||||||||||||||||||| ||||||||||||| ||||||| | |||| |    
T  17612005 ttttttaagacacaactgacaagttttaattgtatgatttatttattcacttcctattttttagccacatctccttgaattgtggcaaataattcattat 17611906  T
Q  409 gattggttgctcttta-tcttgaagaattcttcatgttat 447  Q
    ||||||||| |||||| ||||||||||||||| |||||||    
T  17611905 gattggttgttctttattcttgaagaattcttgatgttat 17611866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 95 - 232
Target Start/End: Complemental strand, 36856653 - 36856516
Alignment:
Q  95 gggcattggataaaggaacaaaaatataaattttgtgttggaaaatgataaaaagtagttaaggcaacttgtaaaaagtttataaattgttgtttccaat 194  Q
    |||||||||||||||||||||||||| ||||| ||| || |||| |||||||||||  | ||| |||||||||||||||||| |||| ||||||||||||    
T  36856653 gggcattggataaaggaacaaaaatagaaattgtgtattagaaagtgataaaaagtgatcaagtcaacttgtaaaaagtttacaaatagttgtttccaat 36856554  T
Q  195 gtaaagctgctaattttggttaccttaaccattgccct 232  Q
     ||||| | ||||||||||||||||||| |||||||||    
T  36856553 ataaagttactaattttggttaccttaatcattgccct 36856516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 92 - 223
Target Start/End: Original strand, 45174491 - 45174622
Alignment:
Q  92 ttggggcattggataaaggaacaaaaatataaattttgtgttggaaaatgataaaaagtagttaaggcaacttgtaaaaagtttataaattgttgtttcc 191  Q
    ||||||||||| |||||||||  || ||| ||||||||||||| ||||||||||||| | || ||| |||||||||||||||||||||||||||||||||    
T  45174491 ttggggcattgaataaaggaatgaagatagaaattttgtgttgaaaaatgataaaaattggtcaagtcaacttgtaaaaagtttataaattgttgtttcc 45174590  T
Q  192 aatgtaaagctgctaattttggttaccttaac 223  Q
    |||||||| ||  |||||||||||| ||||||    
T  45174591 aatgtaaaactattaattttggttatcttaac 45174622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 271 - 412
Target Start/End: Complemental strand, 42195578 - 42195437
Alignment:
Q  271 aggaaaatgctatttctctagaaaaatagcatcaagaatttttcaagacacatttgacaagttttaattgcatgatttatttgttgacttcctatttttt 370  Q
    ||||||||| |||||||||||||||||| |||||||||||||| |||| |||  | | ||||||||||||||||||||||||||| ||| | |||||||     
T  42195578 aggaaaatgttatttctctagaaaaataacatcaagaattttttaagatacaactaaaaagttttaattgcatgatttatttgttcactccttatttttc 42195479  T
Q  371 agccacacctccttgaattgtagcaaatagtacattgtgatt 412  Q
    || |||||||||||||||||| | ||||||| ||||| ||||    
T  42195478 agacacacctccttgaattgtggtaaatagtgcattgagatt 42195437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 329 - 447
Target Start/End: Complemental strand, 22327001 - 22326882
Alignment:
Q  329 aagttttaattgcatgatttatttgttgacttcctattttttagccacacctccttgaattgtagcaaatagtacattgtgattggttgctcttt-atct 427  Q
    ||||||||||||||||||||||||||| |||| |||||||| || ||||||||| |||||||| |||||||||||||||||||||   |||||||  |||    
T  22327001 aagttttaattgcatgatttatttgttcactttctatttttcagtcacacctccctgaattgtggcaaatagtacattgtgattgacggctctttcttct 22326902  T
Q  428 tgaagaattcttcatgttat 447  Q
    |||||||||||| |||||||    
T  22326901 tgaagaattcttgatgttat 22326882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 74 - 208
Target Start/End: Original strand, 675089 - 675222
Alignment:
Q  74 aaatgctaaccaatacttttggggcattggataaaggaacaaaaatataaattttgtgttggaaaatgataaaaagtagttaaggcaacttgtaaaaagt 173  Q
    |||||||||||| | |  || ||||||||||||||| || ||||||| ||||||||||||||||||| ||||||||| || ||  ||||| |||||||||    
T  675089 aaatgctaaccattgccctttgggcattggataaagaaa-aaaaatagaaattttgtgttggaaaataataaaaagtggtcaaatcaactagtaaaaagt 675187  T
Q  174 ttataaattgttgtttccaatgtaaagctgctaat 208  Q
    |||||||||||||||| |||||||||||| |||||    
T  675188 ttataaattgttgttttcaatgtaaagctactaat 675222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 92 - 223
Target Start/End: Original strand, 35729427 - 35729560
Alignment:
Q  92 ttggggcattggataaaggaacaaaaatata--aattttgtgttggaaaatgataaaaagtagttaaggcaacttgtaaaaagtttataaattgttgttt 189  Q
    ||||| ||||| ||||||||| ||||| |||  |||| ||||||| ||| ||||||||||| |||||| ||||||||||||| |||||||||| ||||||    
T  35729427 ttgggacattgaataaaggaaaaaaaaaatagaaattgtgtgttgaaaagtgataaaaagtggttaagtcaacttgtaaaaaatttataaattattgttt 35729526  T
Q  190 ccaatgtaaagctgctaattttggttaccttaac 223  Q
    |||||||||| || |||||||||||||| |||||    
T  35729527 ccaatgtaaaactactaattttggttactttaac 35729560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 271 - 413
Target Start/End: Complemental strand, 8307724 - 8307584
Alignment:
Q  271 aggaaaatgctatttctctagaaaaatagcatcaagaa-tttttcaagacacatttgacaagttttaattgcatgatttatttgttgacttcctattttt 369  Q
    ||||||||| |||||||| |||||||||||||| | || ||||||||||||||  || ||| |||||| ||||||||||||||||| |||||||||||||    
T  8307724 aggaaaatgatatttctcaagaaaaatagcatcgacaaatttttcaagacacaactggcaaattttaactgcatgatttatttgttcacttcctattttt 8307625  T
Q  370 tagccacacctccttgaattgtagcaaatagtacattgtgattg 413  Q
     |||||||   ||||||||||| || |||||| |||| ||||||    
T  8307624 gagccaca---ccttgaattgtggctaatagtgcattatgattg 8307584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 99 - 227
Target Start/End: Complemental strand, 5787363 - 5787235
Alignment:
Q  99 attggataaaggaacaaaaatataaattttgtgttggaaaatgataaaaagtagttaaggcaacttgtaaaaagtttataaattgttgtttccaatgtaa 198  Q
    |||||||| ||||||||||||| ||| ||| ||||||||| ||||||||||| || ||| || ||| ||||||||||| ||||| |||||| ||||||||    
T  5787363 attggatagaggaacaaaaataaaaaatttatgttggaaagtgataaaaagtggtcaagtcatcttataaaaagtttacaaattattgttttcaatgtaa 5787264  T
Q  199 agctgctaattttggttaccttaaccatt 227  Q
    | ||  ||||||||||||| |||||||||    
T  5787263 aactattaattttggttacattaaccatt 5787235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 648 - 715
Target Start/End: Original strand, 44569539 - 44569606
Alignment:
Q  648 ttccggtgaccgtccaccggacggcggcgacaacaccattgaccgtcaatcattctcctcccttcatc 715  Q
    ||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  44569539 ttccggttaccgtccaccggacggcggcgacaaccccattgaccgtcaatcattctcctcccttcatc 44569606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 272 - 425
Target Start/End: Complemental strand, 25686563 - 25686412
Alignment:
Q  272 ggaaaatgctatttctctagaaaaatagcatcaagaatttttcaagacacatttgacaagttttaattgcatgattt---atttgttgacttcctatttt 368  Q
    |||||||| ||||||| || |||||||| || |||||||||||||||     | |||||||||| |||| ||||||    ||||||| ||||||||||||    
T  25686563 ggaaaatgttatttctttacaaaaatagtattaagaatttttcaaga-----tcgacaagttttgattgtatgattattaatttgtttacttcctatttt 25686469  T
Q  369 ttagccacacctccttgaattgtagcaaatagtacattgtgattggttgctctttat 425  Q
      |||||||||||||| |||||| | |||||||||||| |||||| ||| |||||||    
T  25686468 ccagccacacctccttaaattgtggtaaatagtacattatgattgattgttctttat 25686412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 511 - 558
Target Start/End: Original strand, 44569400 - 44569447
Alignment:
Q  511 accttatacacacttcaaaaataatatttaatactcatacaaagtgtc 558  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||    
T  44569400 accttatacacacttcaaaaataatattaaatactcatacaaagtgtc 44569447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 184
Target Start/End: Complemental strand, 24620858 - 24620778
Alignment:
Q  104 ataaaggaacaaaaatataaattttgtgttggaaaatgataaaaag-tagttaaggcaacttgtaaaaagtttataaattgt 184  Q
    ||||||||| ||||||| ||||||| |||| ||||||||||||||  |  | ||| ||||||||||||| ||||||||||||    
T  24620858 ataaaggaa-aaaaataaaaattttatgttagaaaatgataaaaaaattatcaagtcaacttgtaaaaattttataaattgt 24620778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 109; Significance: 2e-54; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 272 - 447
Target Start/End: Original strand, 36473048 - 36473224
Alignment:
Q  272 ggaaaatgctatttctctagaaaaatagcatcaagaatttttcaagacacatttgacaagttttaattgcatgatttatttgttgacttcctatttttta 371  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||| |||  ||||||||||||||||||||||||||| ||||||||||||| |    
T  36473048 ggaaaatgctatttctctagaaaaataacatcaagaatttttcaagacacaattggtaagttttaattgcatgatttatttgttcacttcctatttttca 36473147  T
Q  372 gccacacctccttgaattgtagcaaatagtacattgtgattggttgctcttta-tcttgaagaattcttcatgttat 447  Q
    ||||||||||||| ||||||  ||||||||  | ||||||||  ||||||||| ||||||||||||||| |||||||    
T  36473148 gccacacctccttaaattgtgtcaaatagtgtactgtgattgactgctctttattcttgaagaattcttgatgttat 36473224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 105; E-Value: 5e-52
Query Start/End: Original strand, 272 - 447
Target Start/End: Complemental strand, 41322729 - 41322553
Alignment:
Q  272 ggaaaatgctatttctctagaaaaatagcatcaagaatttttcaagacacatttgacaagttttaattgcatgatttatttgttgacttcctatttttta 371  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| | ||  |||||||||||||||||||||| ||||| |||||||||||||      
T  41322729 ggaaaatgctatttctctagaaaaatagcatcaagaatttttcaagacatagttagcaagttttaattgcatgatttaattgttaacttcctatttttct 41322630  T
Q  372 gccacacctccttgaattgtagcaaatagtacattgtgattggttgctcttta-tcttgaagaattcttcatgttat 447  Q
     ||||||||||||||||| |  |||||||| |||||||||||  ||||||||| ||||||||||||||| |||||||    
T  41322629 accacacctccttgaattttcacaaatagtgcattgtgattgactgctctttattcttgaagaattcttgatgttat 41322553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 272 - 399
Target Start/End: Original strand, 15561913 - 15562040
Alignment:
Q  272 ggaaaatgctatttctctagaaaaatagcatcaagaatttttcaagacacatttgacaagttttaattgcatgatttatttgttgacttcctatttttta 371  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| ||| ||| ||||||||||||| |||||||||||||| ||||||||||||| |    
T  15561913 ggaaaatgctatttatctagaaaaatagcatcaagaatttttcaagatacagttggcaagttttaattgtatgatttatttgttcacttcctatttttca 15562012  T
Q  372 gccacacctccttgaattgtagcaaata 399  Q
    |||||||||||||||||||| |||||||    
T  15562013 gccacacctccttgaattgtggcaaata 15562040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 93; E-Value: 7e-45
Query Start/End: Original strand, 91 - 227
Target Start/End: Original strand, 36054979 - 36055115
Alignment:
Q  91 tttggggcattggataaaggaacaaaaatataaattttgtgttggaaaatgataaaaagtagttaaggcaacttgtaaaaagtttataaattgttgtttc 190  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| || ||  |||||||||||||||| | |||||||||||||    
T  36054979 tttggggcattggataaaggaacaaaaataaaaattttgtgttggaaagtgataaaaagtggtcaaatcaacttgtaaaaagttaacaaattgttgtttc 36055078  T
Q  191 caatgtaaagctgctaattttggttaccttaaccatt 227  Q
     ||||||||||| |||||||||||||| |||||||||    
T  36055079 taatgtaaagctactaattttggttactttaaccatt 36055115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 93; E-Value: 7e-45
Query Start/End: Original strand, 272 - 447
Target Start/End: Complemental strand, 39112848 - 39112672
Alignment:
Q  272 ggaaaatgctatttctctagaaaaatagcatcaagaatttttcaagacacatttgacaagttttaattgcatgatttatttgttgacttcctatttttta 371  Q
    |||||||||||  |||||||||||||||||| ||   |||||||||||||| ||| ||| ||||||||| |||||||||||||| |||| |||||||| |    
T  39112848 ggaaaatgctacatctctagaaaaatagcattaaatttttttcaagacacaattggcaaattttaattggatgatttatttgttcactttctatttttca 39112749  T
Q  372 gccacacctccttgaattgtagcaaatagtacattgtgattggttgctcttta-tcttgaagaattcttcatgttat 447  Q
    ||| |||||||||||||| | ||||||||| |||||||||||||||||||||| | ||||||||||||| |||||||    
T  39112748 gccgcacctccttgaattatggcaaatagtgcattgtgattggttgctctttatttttgaagaattcttgatgttat 39112672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 271 - 447
Target Start/End: Complemental strand, 29314200 - 29314023
Alignment:
Q  271 aggaaaatgctatttctctagaaaaatagcatcaagaatttttcaagacacatttgacaagttttaattgcatgatttatttgttgacttcctatttttt 370  Q
    |||||||||||||||||||| |||||||| |||||||||||||||||||||| |||  ||||||||||||||| ||||||||||  |||| ||||||||     
T  29314200 aggaaaatgctatttctctaaaaaaatagtatcaagaatttttcaagacacagttggtaagttttaattgcattatttatttgtccactttctatttttc 29314101  T
Q  371 agccacacctccttgaattgtagcaaatagtacattgtgattggttgctcttta-tcttgaagaattcttcatgttat 447  Q
    || ||||||||||| |||||| ||||||||| |||||||||||  | ||||||| |||| || ||||||| |||||||    
T  29314100 agtcacacctccttaaattgtggcaaatagtgcattgtgattgacttctctttattcttaaacaattcttgatgttat 29314023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 274 - 447
Target Start/End: Original strand, 11653712 - 11653889
Alignment:
Q  274 aaaatgctatttctctagaaaaatagcatcaagaatttttcaagacacatttgacaagttttaattgcatgatttatttgttgacttcctattttttagc 373  Q
    ||||||||||||||||| ||||||| |||||||||||||| |||||||   ||||||||||||||| ||||||||||||||| |||| || ||||| |||    
T  11653712 aaaatgctatttctctacaaaaataacatcaagaattttttaagacacggctgacaagttttaattacatgatttatttgttcacttact-tttttaagc 11653810  T
Q  374 cacacctccttgaattgtagcaaatagtacattgtgattggt----tgctcttta-tcttgaagaattcttcatgttat 447  Q
    ||||| |||||||||||| |||||||||||||| |||||| |    ||||||||| ||||||||||||||| |||||||    
T  11653811 cacacatccttgaattgtggcaaatagtacattatgattgattgactgctctttattcttgaagaattcttgatgttat 11653889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 92 - 227
Target Start/End: Original strand, 10635965 - 10636100
Alignment:
Q  92 ttggggcattggataaaggaacaaaaatataaattttgtgttggaaaatgataaaaagtagttaaggcaacttgtaaaaagtttataaattgttgtttcc 191  Q
    ||||||||||||||||| ||||||||||| ||||||||||||| |||||||||||||||||  |||  ||||| |||||||||||| |||| ||||||||    
T  10635965 ttggggcattggataaatgaacaaaaatagaaattttgtgttgaaaaatgataaaaagtagccaagttaacttataaaaagtttattaattattgtttcc 10636064  T
Q  192 aatgtaaagctgctaattttggttaccttaaccatt 227  Q
    |||||||| || ||||||||| ||||||||||||||    
T  10636065 aatgtaaaactactaattttgattaccttaaccatt 10636100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 95 - 230
Target Start/End: Complemental strand, 24286604 - 24286469
Alignment:
Q  95 gggcattggataaaggaacaaaaatataaattttgtgttggaaaatgataaaaagtagttaaggcaacttgtaaaaagtttataaattgttgtttccaat 194  Q
    |||||||||||| ||||||||||||| ||||||||||||||||| ||||||||||| || ||| |||||||||||| ||||| ||||| ||||||| |||    
T  24286604 gggcattggatagaggaacaaaaatagaaattttgtgttggaaagtgataaaaagtggtcaagtcaacttgtaaaatgtttagaaattattgtttctaat 24286505  T
Q  195 gtaaagctgctaattttggttaccttaaccattgcc 230  Q
     |||| || ||||||||||||||| |||||||||||    
T  24286504 ataaaactactaattttggttaccgtaaccattgcc 24286469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 268 - 374
Target Start/End: Complemental strand, 33889052 - 33888946
Alignment:
Q  268 tttaggaaaatgctatttctctagaaaaatagcatcaagaatttttcaagacacatttgacaagttttaattgcatgatttatttgttgacttcctattt 367  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||  ||||||||||||||||||| ||||||||||| ||| |||||||    
T  33889052 tttaggaaaatgctatttctctagaaaaatagcatcaagaatttttcaagaaacaactgacaagttttaattgcataatttatttgttcactccctattt 33888953  T
Q  368 tttagcc 374  Q
    || ||||    
T  33888952 ttcagcc 33888946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 98 - 228
Target Start/End: Complemental strand, 44159446 - 44159316
Alignment:
Q  98 cattggataaaggaacaaaaatataaattttgtgttggaaaatgataaaaagtagttaaggcaacttgtaaaaagtttataaattgttgtttccaatgta 197  Q
    |||||||||||| |||||||||| ||||||||||||||||||||||||||| |||| || | || ||||||||| ||||||||||||| || ||||||||    
T  44159446 cattggataaagtaacaaaaataaaaattttgtgttggaaaatgataaaaattagtcaaagtaatttgtaaaaaatttataaattgttattcccaatgta 44159347  T
Q  198 aagctgctaattttggttaccttaaccattg 228  Q
    |||||  ||||||| |||| |||||||||||    
T  44159346 aagctattaattttagttatcttaaccattg 44159316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 271 - 439
Target Start/End: Complemental strand, 2001848 - 2001680
Alignment:
Q  271 aggaaaatgctatttctctagaaaaatagcatcaagaatttttcaagacacatttgacaagttttaattgcatgatttatttgttgacttcctatttttt 370  Q
    ||||||||| |||||||||||||||||||||||||   ||||||||||||||  || |||||||||||| ||||||||||||||| |||  |||||||      
T  2001848 aggaaaatgttatttctctagaaaaatagcatcaaatttttttcaagacacagctgccaagttttaattacatgatttatttgttcactatctattttcc 2001749  T
Q  371 agccacacctccttgaattgtagcaaatagtacattgtgattggttgctcttta-tcttgaagaattctt 439  Q
    |||||||||||||| |||||| |||||| ||  ||| ||||||  ||||||||| |||||||||||||||    
T  2001748 agccacacctccttaaattgtggcaaatcgtgtatt-tgattgactgctctttattcttgaagaattctt 2001680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 95 - 232
Target Start/End: Complemental strand, 40452018 - 40451881
Alignment:
Q  95 gggcattggataaaggaacaaaaatataaattttgtgttggaaaatgataaaaagtagttaaggcaacttgtaaaaagtttataaattgttgtttccaat 194  Q
    |||||||||||||||||||||||||  ||||||||||||||||| |||||||||||| | ||  ||||||||||||| |||||||||||||||||||||     
T  40452018 gggcattggataaaggaacaaaaatggaaattttgtgttggaaagtgataaaaagtaatcaaatcaacttgtaaaaaatttataaattgttgtttccaac 40451919  T
Q  195 gtaaagctgctaattttggttaccttaaccattgccct 232  Q
     |||| || ||||||||| ||| |||||| ||| ||||    
T  40451918 ttaaaactactaattttgattatcttaacaatttccct 40451881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 271 - 447
Target Start/End: Complemental strand, 34392300 - 34392132
Alignment:
Q  271 aggaaaatgctatttctctagaaaaatagcatcaagaatttttcaagacacatttgacaagttttaattgcatgatttatttgttgacttcctatttttt 370  Q
    |||||||||||||||||||| |||||||| || ||||||||||     || ||     ||||||||||||||||||||||||||| ||||   ||||||     
T  34392300 aggaaaatgctatttctctaaaaaaatagaattaagaatttttt----caaat-----aagttttaattgcatgatttatttgttcacttttcatttttc 34392210  T
Q  371 agccacacctccttgaattgtagcaaatagtacattgtgattggttgctcttta-tcttgaagaattcttcatgttat 447  Q
    |||||||||| ||| |||||| |||||||||||||||||||||  ||||||||| ||||||| ||||||| |||||||    
T  34392209 agccacaccttcttaaattgtggcaaatagtacattgtgattgagtgctctttattcttgaaaaattcttgatgttat 34392132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 103 - 223
Target Start/End: Complemental strand, 31452171 - 31452052
Alignment:
Q  103 gataaaggaacaaaaatataaattttgtgttggaaaatgataaaaagtagttaaggcaacttgtaaaaagtttataaattgttgtttccaatgtaaagct 202  Q
    |||||| ||||||||||| ||||| |||||||||||||||| |||||| || ||  ||||||| ||||| |||| ||||||||||||| |||||||||||    
T  31452171 gataaaagaacaaaaatagaaattatgtgttggaaaatgatgaaaagtggtcaaatcaacttgaaaaaa-tttacaaattgttgtttctaatgtaaagct 31452073  T
Q  203 gctaattttggttaccttaac 223  Q
      |||||||||||||||||||    
T  31452072 attaattttggttaccttaac 31452052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 325 - 447
Target Start/End: Complemental strand, 4851880 - 4851757
Alignment:
Q  325 tgacaagttttaattgcatgatttatttgttgacttcctattttttagccacacctccttgaattgtagcaaatagtacattgtgattggttgctcttta 424  Q
    ||||||||||||||||||||||||||||||| | ||||||||||| |||||||| ||||| |||||| | ||||||| |||| ||||||  |||||||||    
T  4851880 tgacaagttttaattgcatgatttatttgtttatttcctatttttcagccacacttccttaaattgtggaaaatagtgcattatgattgactgctcttta 4851781  T
Q  425 -tcttgaagaattcttcatgttat 447  Q
     |||| || ||||||| |||||||    
T  4851780 ttcttaaaaaattcttgatgttat 4851757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 272 - 352
Target Start/End: Original strand, 37919508 - 37919588
Alignment:
Q  272 ggaaaatgctatttctctagaaaaatagcatcaagaatttttcaagacacatttgacaagttttaattgcatgatttattt 352  Q
    |||||||||||||||||||||||||||| ||||||||||| |||| ||||| |||||||||||||||||| | ||||||||    
T  37919508 ggaaaatgctatttctctagaaaaatagtatcaagaatttatcaaaacacagttgacaagttttaattgcgtaatttattt 37919588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 271 - 425
Target Start/End: Complemental strand, 1005793 - 1005636
Alignment:
Q  271 aggaaaatgctatttctctagaaaaa--tagcatcaagaatttttcaagacacatt-tgacaagttttaattgcatgatttatttgttgacttcctattt 367  Q
    |||||||||||||||||||| |||||  ||||||||| | ||||| ||| ||||   ||||||||||||||||||| ||||||||||| |||||||||||    
T  1005793 aggaaaatgctatttctctaaaaaaaaatagcatcaaaatttttttaaggcacaaactgacaagttttaattgcataatttatttgttcacttcctattt 1005694  T
Q  368 tttagccacacctccttgaattgtagcaaatagtacattgtgattggttgctctttat 425  Q
    || || |||||||| || ||||||  ||||| || |||| | |||| || ||||||||    
T  1005693 ttcagtcacacctctttaaattgtgtcaaatggtgcattataattgattactctttat 1005636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 336 - 447
Target Start/End: Complemental strand, 8551625 - 8551513
Alignment:
Q  336 aattgcatgatttatttgttgacttcctattttttagccacacctccttgaattgtagcaaatagtacattgtgattggttgctcttta-tcttgaagaa 434  Q
    |||||||||||||||||||| | || |||||||||| ||||| |||||| |||||| ||||| | | ||||||||||||||| |||||| ||| ||||||    
T  8551625 aattgcatgatttatttgttcattttctattttttaaccacatctcctttaattgtggcaaacaatgcattgtgattggttgttctttattctcgaagaa 8551526  T
Q  435 ttcttcatgttat 447  Q
    ||||| |||||||    
T  8551525 ttcttaatgttat 8551513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 97 - 223
Target Start/End: Complemental strand, 28280523 - 28280397
Alignment:
Q  97 gcattggataaaggaacaaaaatataaattttgtgttggaaaatgataaaaagtagttaaggcaacttgtaaaaagtttataaattgttgtttccaatgt 196  Q
    |||||||||||  ||| |||||||||||| |||||||||||||||||||||||| || ||| |||||| || ||| |||  |||| |||||||  ||| |    
T  28280523 gcattggataagagaataaaaatataaatattgtgttggaaaatgataaaaagtggtcaagtcaacttatataaaattttaaaatcgttgtttttaatat 28280424  T
Q  197 aaagctgctaattttggttaccttaac 223  Q
    |||||  ||||||||| ||||||||||    
T  28280423 aaagcaactaattttgattaccttaac 28280397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 271 - 318
Target Start/End: Complemental strand, 4824343 - 4824296
Alignment:
Q  271 aggaaaatgctatttctctagaaaaatagcatcaagaatttttcaaga 318  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||    
T  4824343 aggaaaatgctatttctctagaaaaatagcattaagaatttttcaaga 4824296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 332 - 425
Target Start/End: Complemental strand, 11643423 - 11643330
Alignment:
Q  332 ttttaattgcatgatttatttgttgacttcctattttttagccacacctccttgaattgtagcaaatagtacattgtgattggttgctctttat 425  Q
    ||||||||| |||||||||||||| ||||| ||||||| | | |||| | ||| |||||| | ||||||| |||||||||||  ||||||||||    
T  11643423 ttttaattgtatgatttatttgttcacttcgtatttttcaactacactttcttaaattgtggtaaatagtgcattgtgattgactgctctttat 11643330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 351 - 433
Target Start/End: Complemental strand, 4794242 - 4794159
Alignment:
Q  351 ttgttgacttcctattttttagccacacctccttgaattgtagcaaatagtacattgtgattggttgctcttta-tcttgaaga 433  Q
    ||||| |||||||||||||| |||| |||||| |  ||||| ||||||||| |||||||||||| |||| |||| |||||||||    
T  4794242 ttgttcacttcctattttttggccaaacctccatatattgtggcaaatagtgcattgtgattggctgctatttattcttgaaga 4794159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 270 - 309
Target Start/End: Original strand, 13357627 - 13357666
Alignment:
Q  270 taggaaaatgctatttctctagaaaaatagcatcaagaat 309  Q
    |||||||||||||||| |||||||||||||||||||||||    
T  13357627 taggaaaatgctatttatctagaaaaatagcatcaagaat 13357666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 265 - 320
Target Start/End: Complemental strand, 8551683 - 8551625
Alignment:
Q  265 ttatttaggaaaatgctatttctct---agaaaaatagcatcaagaatttttcaagaca 320  Q
    |||||||||||||||||||||||||   | ||||||||||| | |||||||||||||||    
T  8551683 ttatttaggaaaatgctatttctctaaaaaaaaaatagcattatgaatttttcaagaca 8551625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 337 - 413
Target Start/End: Original strand, 37919603 - 37919679
Alignment:
Q  337 attgcatgatttatttgttgacttcctattttttagccacacctccttgaattgtagcaaatagtacattgtgattg 413  Q
    ||||||||||||||||||| |||| |||||||| |  |||| |||||| ||||||  |||||| | |||||||||||    
T  37919603 attgcatgatttatttgttcacttactatttttcactcacatctccttaaattgtgacaaataatgcattgtgattg 37919679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 276 - 318
Target Start/End: Original strand, 4851737 - 4851779
Alignment:
Q  276 aatgctatttctctagaaaaatagcatcaagaatttttcaaga 318  Q
    |||||||| |||||||||||||| |||||||||||||| ||||    
T  4851737 aatgctatatctctagaaaaataacatcaagaattttttaaga 4851779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 276 - 318
Target Start/End: Original strand, 34392112 - 34392154
Alignment:
Q  276 aatgctatttctctagaaaaatagcatcaagaatttttcaaga 318  Q
    |||||||| |||||| ||||||| |||||||||||||||||||    
T  34392112 aatgctatatctctaaaaaaataacatcaagaatttttcaaga 34392154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 272 - 305
Target Start/End: Original strand, 1416048 - 1416081
Alignment:
Q  272 ggaaaatgctatttctctagaaaaatagcatcaa 305  Q
    |||||||| |||||||||||||||||||||||||    
T  1416048 ggaaaatgttatttctctagaaaaatagcatcaa 1416081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 116 - 153
Target Start/End: Original strand, 3744324 - 3744361
Alignment:
Q  116 aaatataaattttgtgttggaaaatgataaaaagtagt 153  Q
    ||||| ||||||||||||| ||||||||||||||||||    
T  3744324 aaatagaaattttgtgttgaaaaatgataaaaagtagt 3744361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 109; Significance: 2e-54; HSPs: 11)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 272 - 447
Target Start/End: Original strand, 7646773 - 7646949
Alignment:
Q  272 ggaaaatgctatttctctagaaaaatagcatcaagaatttttcaagacacatttgacaagttttaattgcatgatttatttgttgacttcctatttttta 371  Q
    |||||||||||||||||||||||||||| |||| |||||||||||||||||| || |||||||||||||||||||||||||||| | ||||||||||| |    
T  7646773 ggaaaatgctatttctctagaaaaatagtatcaggaatttttcaagacacatctggcaagttttaattgcatgatttatttgttcatttcctatttttca 7646872  T
Q  372 gccacacctccttgaattgtagcaaatagtacattgtgattggttgctcttta-tcttgaagaattcttcatgttat 447  Q
    | ||||| |||||||||||| ||||||||| |||||||||||| ||||||||| | || |||||||||| |||||||    
T  7646873 gtcacacatccttgaattgtggcaaatagtgcattgtgattggctgctctttatttttaaagaattcttgatgttat 7646949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 286 - 447
Target Start/End: Complemental strand, 25935694 - 25935532
Alignment:
Q  286 ctctagaaaaatagcatcaagaatttttcaagacacatttgacaagttttaattgcatgatttatttgttgacttcctattttttagccacacctccttg 385  Q
    |||||||||||||||||||||||||||||||||||||  || |||||||||||| |||||||||||  || |||| |||||||| ||||||||||||||     
T  25935694 ctctagaaaaatagcatcaagaatttttcaagacacagctggcaagttttaattacatgatttattctttcactttctatttttcagccacacctcctta 25935595  T
Q  386 aattgtagcaaatagtacattgtgattggttgctcttta-tcttgaagaattcttcatgttat 447  Q
    ||||||  ||||||||||||| ||||| | ||||||||| ||||||| ||||||| |||||||    
T  25935594 aattgtgacaaatagtacattatgattagatgctctttattcttgaataattcttaatgttat 25935532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 93 - 222
Target Start/End: Original strand, 6614878 - 6615007
Alignment:
Q  93 tggggcattggataaaggaacaaaaatataaattttgtgttggaaaatgataaaaagtagttaaggcaacttgtaaaaagtttataaattgttgtttcca 192  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| || ||  |||||||||||||||||||||||| ||||||| |    
T  6614878 tggggcattggataaaggaacaaaaatagaaattttgtgttggaaaatgataaaaagtggtcaaatcaacttgtaaaaagtttataaattattgtttcta 6614977  T
Q  193 atgtaaagctgctaattttggttaccttaa 222  Q
     |||||| || |||||||| ||||||||||    
T  6614978 gtgtaaaactactaattttagttaccttaa 6615007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 92 - 225
Target Start/End: Complemental strand, 22616977 - 22616846
Alignment:
Q  92 ttggggcattggataaaggaacaaaaatataaattttgtgttggaaaatgataaaaagtagttaaggcaacttgtaaaaagtttataaattgttgtttcc 191  Q
    |||||||||||||||||  |||||||||| |||||  ||||||||||||||||||||||||| ||  |||||| ||||||||||||||||||||||||||    
T  22616977 ttggggcattggataaaataacaaaaatagaaatt--gtgttggaaaatgataaaaagtagtcaaatcaacttataaaaagtttataaattgttgtttcc 22616880  T
Q  192 aatgtaaagctgctaattttggttaccttaacca 225  Q
    |||||||| || || |||||||||||||||||||    
T  22616879 aatgtaaaactactcattttggttaccttaacca 22616846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 299 - 413
Target Start/End: Original strand, 29487541 - 29487655
Alignment:
Q  299 gcatcaagaatttttcaagacacatttgacaagttttaattgcatgatttatttgttgacttcctattttttagccacacctccttgaattgtagcaaat 398  Q
    |||||||||||||||| ||||||| |||  |||| || ||||||||||||||||||| ||| ||||||||| ||||||||||| || |||||| ||||||    
T  29487541 gcatcaagaatttttccagacacagttggtaagtgttgattgcatgatttatttgttcactccctatttttcagccacacctcatttaattgtggcaaat 29487640  T
Q  399 agtacattgtgattg 413  Q
    ||| || ||||||||    
T  29487641 agtgcaatgtgattg 29487655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 336 - 439
Target Start/End: Original strand, 12607123 - 12607227
Alignment:
Q  336 aattgcatgatttatttgttgacttcctattttttagccacacctccttgaattgtagcaaatagtacattgtgattggttgctcttta-tcttgaagaa 434  Q
    |||||||||||||||||||| |||| |||||||| || ||||||||||| |||||| ||||||||| || ||||||||  ||||||||| ||||||||||    
T  12607123 aattgcatgatttatttgttcactttctatttttcagtcacacctccttaaattgtggcaaatagtgcactgtgattgactgctctttattcttgaagaa 12607222  T
Q  435 ttctt 439  Q
    |||||    
T  12607223 ttctt 12607227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 93 - 223
Target Start/End: Complemental strand, 31765904 - 31765774
Alignment:
Q  93 tggggcattggataaaggaacaaaaatataaattttgtgttggaaaatgataaaaagtagttaaggcaacttgtaaaaagtttataaattgttgtttcca 192  Q
    ||||| ||||||||| |||| ||||||| ||||| ||||||||| | | ||||||| | || ||  ||||||||||||||||||  |||| |||||| ||    
T  31765904 tggggtattggataagggaataaaaatagaaattctgtgttggagagtaataaaaaatggtcaaatcaacttgtaaaaagtttacgaattattgttttca 31765805  T
Q  193 atgtaaagctgctaattttggttaccttaac 223  Q
    ||||||| || ||||||||| ||||||||||    
T  31765804 atgtaaaactactaattttgattaccttaac 31765774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 272 - 364
Target Start/End: Complemental strand, 17367016 - 17366930
Alignment:
Q  272 ggaaaatgctatttctctagaaaaatagcatcaagaatttttcaagacacatttgacaagttttaattgcatgatttatttgttgacttccta 364  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||      |||||||||||||||||  ||||||||| ||||||||    
T  17367016 ggaaaatgctatttctctagaaaaatagcatcaa-aatttttcaagacac-----gcaagttttaattgcatgcattatttgttcacttccta 17366930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 272 - 348
Target Start/End: Original strand, 12607030 - 12607107
Alignment:
Q  272 ggaaaatgctatttctctag-aaaaatagcatcaagaatttttcaagacacatttgacaagttttaattgcatgattt 348  Q
    |||||||| | ||||||||| |||||||| ||||||||||||| |||||||| |||| ||||||||||||||||||||    
T  12607030 ggaaaatgttgtttctctaggaaaaatagtatcaagaattttttaagacacaattgataagttttaattgcatgattt 12607107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 95 - 230
Target Start/End: Complemental strand, 28542064 - 28541929
Alignment:
Q  95 gggcattggataaaggaacaaaaatataaattttgtgttggaaaatgataaaaagtagttaaggcaacttgtaaaaagtttataaattgttgtttccaat 194  Q
    ||||||||| |||  |||||| |||| |||| |||||||||||| |  ||||||||  | ||  |||||| | ||||||||  ||||||| |||| ||||    
T  28542064 gggcattggttaagagaacaataataaaaatattgtgttggaaagtagtaaaaagtgatgaattcaactttttaaaagtttgaaaattgtagttttcaat 28541965  T
Q  195 gtaaagctgctaattttggttaccttaaccattgcc 230  Q
    |||||  | ||| |||| ||| ||||||||||||||    
T  28541964 gtaaaattactattttttgtttccttaaccattgcc 28541929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 329 - 368
Target Start/End: Original strand, 28898438 - 28898477
Alignment:
Q  329 aagttttaattgcatgatttatttgttgacttcctatttt 368  Q
    ||||||||||||||||||||||||||| ||| ||||||||    
T  28898438 aagttttaattgcatgatttatttgttcactccctatttt 28898477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 92; Significance: 3e-44; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 273 - 447
Target Start/End: Complemental strand, 492865 - 492690
Alignment:
Q  273 gaaaatgctatttctctagaaaaatagcatcaagaatttttcaagacacatttgacaagttttaattgcatgatttatttgttgacttcctattttttag 372  Q
    ||||||| |||||||||| |||||||||||||| | |||||||||||||    | |||||||||||||||| ||||||||||| | ||||||||||| ||    
T  492865 gaaaatgttatttctctaaaaaaatagcatcaaaattttttcaagacacgacagtcaagttttaattgcataatttatttgttcatttcctatttttcag 492766  T
Q  373 ccacacctccttgaattgtagcaaatagtacattgtgattggttgctcttta-tcttgaagaattcttcatgttat 447  Q
    |||||||||||||||||||  ||||| || |||||||||||| ||||||||| ||||||||||||||| |||||||    
T  492765 ccacacctccttgaattgtgacaaattgtgcattgtgattggctgctctttattcttgaagaattcttgatgttat 492690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 2)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 365 - 447
Target Start/End: Complemental strand, 642 - 560
Alignment:
Q  365 ttttttagccacacctccttgaattgtagcaaatagtacattgtgattggttgctcttta-tcttgaagaattcttcatgttat 447  Q
    ||||| |||||||||||||| |||||| ||||||||| |||||||||||  ||||||||| ||||||||||||||| |||||||    
T  642 tttttcagccacacctccttaaattgt-gcaaatagtgcattgtgattgactgctctttattcttgaagaattcttgatgttat 560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 365 - 447
Target Start/End: Complemental strand, 8602 - 8520
Alignment:
Q  365 ttttttagccacacctccttgaattgtagcaaatagtacattgtgattggttgctcttta-tcttgaagaattcttcatgttat 447  Q
    ||||| |||||||||||||| |||||| ||||||||| |||||||||||  ||||||||| ||||||||||||||| |||||||    
T  8602 tttttcagccacacctccttaaattgt-gcaaatagtgcattgtgattgactgctctttattcttgaagaattcttgatgttat 8520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0339 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0339
Description:

Target: scaffold0339; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 271 - 322
Target Start/End: Complemental strand, 13443 - 13393
Alignment:
Q  271 aggaaaatgctatttctctagaaaaatagcatcaagaatttttcaagacaca 322  Q
    ||||||||| |||||||||||||||||||||||||||| |||||||||||||    
T  13443 aggaaaatgatatttctctagaaaaatagcatcaagaa-ttttcaagacaca 13393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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