View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11930_low_117 (Length: 257)

Name: NF11930_low_117
Description: NF11930
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11930_low_117
NF11930_low_117
[»] chr7 (40 HSPs)
chr7 (1-83)||(8001398-8001485)
chr7 (1-83)||(48061574-48061661)
chr7 (1-83)||(9977062-9977149)
chr7 (1-83)||(28044608-28044695)
chr7 (1-83)||(28407770-28407857)
chr7 (1-83)||(34899459-34899546)
chr7 (1-83)||(39171442-39171529)
chr7 (1-82)||(35133099-35133185)
chr7 (1-83)||(40993309-40993396)
chr7 (1-83)||(42978762-42978849)
chr7 (1-83)||(45349651-45349738)
chr7 (1-83)||(48316664-48316751)
chr7 (1-84)||(41553286-41553373)
chr7 (1-83)||(22743096-22743183)
chr7 (1-83)||(37837310-37837397)
chr7 (1-83)||(48930859-48930946)
chr7 (1-83)||(12141159-12141247)
chr7 (1-45)||(43369649-43369693)
chr7 (1-49)||(46700187-46700235)
chr7 (1-80)||(47590463-47590547)
chr7 (6-45)||(3222999-3223038)
chr7 (1-82)||(38798933-38799019)
chr7 (1-46)||(13796823-13796868)
chr7 (1-83)||(29617552-29617638)
chr7 (1-49)||(4999920-4999968)
chr7 (1-41)||(9450036-9450076)
chr7 (1-80)||(19297022-19297106)
chr7 (1-49)||(31481990-31482038)
chr7 (3-46)||(5348486-5348529)
chr7 (1-83)||(19404609-19404696)
chr7 (1-83)||(30756671-30756758)
chr7 (18-84)||(35261472-35261543)
chr7 (1-48)||(35665027-35665074)
chr7 (18-84)||(46822190-46822261)
chr7 (1-83)||(24069253-24069333)
chr7 (1-43)||(25287083-25287125)
chr7 (1-46)||(3398342-3398387)
chr7 (8-49)||(39328684-39328725)
chr7 (1-45)||(24770398-24770442)
chr7 (4-44)||(27341705-27341745)
[»] chr6 (34 HSPs)
chr6 (1-83)||(67853-67940)
chr6 (1-83)||(33053020-33053107)
chr6 (1-82)||(606355-606441)
chr6 (4-83)||(21426538-21426622)
chr6 (1-83)||(546182-546269)
chr6 (1-83)||(3913426-3913513)
chr6 (1-83)||(9341503-9341590)
chr6 (1-83)||(23128769-23128856)
chr6 (1-83)||(30776814-30776901)
chr6 (1-83)||(14801978-14802066)
chr6 (1-49)||(12170619-12170667)
chr6 (1-83)||(29743148-29743238)
chr6 (1-44)||(1704028-1704071)
chr6 (1-83)||(7515054-7515141)
chr6 (1-48)||(20226002-20226049)
chr6 (1-48)||(22119986-22120033)
chr6 (1-83)||(26588324-26588411)
chr6 (1-83)||(29255298-29255385)
chr6 (1-83)||(30493683-30493770)
chr6 (1-83)||(30894750-30894836)
chr6 (10-83)||(33740410-33740488)
chr6 (1-46)||(30608409-30608454)
chr6 (1-83)||(32327072-32327156)
chr6 (1-83)||(127820-127905)
chr6 (4-83)||(8497129-8497213)
chr6 (1-41)||(31852092-31852132)
chr6 (1-80)||(1523559-1523638)
chr6 (1-83)||(8102877-8102964)
chr6 (1-83)||(14174923-14175010)
chr6 (1-83)||(14179459-14179546)
chr6 (1-48)||(14846113-14846160)
chr6 (2-40)||(3688730-3688768)
chr6 (18-75)||(4468733-4468789)
chr6 (47-83)||(6957343-6957379)
[»] chr3 (55 HSPs)
chr3 (1-83)||(45568297-45568384)
chr3 (1-84)||(38545948-38546036)
chr3 (1-83)||(9998616-9998703)
chr3 (1-83)||(10108385-10108472)
chr3 (1-83)||(10229625-10229712)
chr3 (1-83)||(21289666-21289753)
chr3 (1-83)||(44959825-44959912)
chr3 (1-83)||(48650586-48650673)
chr3 (1-83)||(52922969-52923056)
chr3 (1-83)||(53807710-53807797)
chr3 (1-84)||(33580029-33580117)
chr3 (1-84)||(51303494-51303582)
chr3 (1-83)||(628775-628862)
chr3 (1-83)||(6954548-6954635)
chr3 (1-83)||(21313185-21313272)
chr3 (1-83)||(21533661-21533748)
chr3 (1-83)||(43017037-43017124)
chr3 (1-82)||(7448767-7448853)
chr3 (1-82)||(7456909-7456995)
chr3 (1-49)||(4711631-4711679)
chr3 (1-49)||(7546764-7546812)
chr3 (1-49)||(10233219-10233267)
chr3 (1-49)||(38860003-38860051)
chr3 (1-49)||(51923876-51923924)
chr3 (1-83)||(8914861-8914948)
chr3 (1-83)||(21431762-21431849)
chr3 (1-83)||(27706078-27706165)
chr3 (1-83)||(40556851-40556938)
chr3 (1-83)||(46304372-46304459)
chr3 (1-83)||(50194187-50194274)
chr3 (1-49)||(9797425-9797473)
chr3 (1-49)||(23799801-23799849)
chr3 (1-83)||(16235575-16235662)
chr3 (1-83)||(27856314-27856401)
chr3 (1-75)||(42460898-42460977)
chr3 (1-43)||(19619862-19619904)
chr3 (1-82)||(29922206-29922291)
chr3 (1-82)||(29971359-29971444)
chr3 (1-46)||(20987649-20987694)
chr3 (1-49)||(3085192-3085240)
chr3 (1-80)||(9173897-9173980)
chr3 (1-49)||(40487474-40487522)
chr3 (1-49)||(43488481-43488529)
chr3 (1-83)||(54149140-54149227)
chr3 (18-83)||(12116270-12116340)
chr3 (18-83)||(36906294-36906364)
chr3 (18-83)||(39917230-39917300)
chr3 (1-50)||(4821955-4822004)
chr3 (8-83)||(3848751-3848831)
chr3 (1-49)||(7792078-7792126)
chr3 (1-49)||(12946858-12946906)
chr3 (1-41)||(19862227-19862267)
chr3 (1-45)||(26739252-26739296)
chr3 (4-83)||(32701643-32701727)
chr3 (1-49)||(46220812-46220860)
[»] chr8 (44 HSPs)
chr8 (1-83)||(31013458-31013545)
chr8 (1-83)||(7883091-7883178)
chr8 (1-83)||(16928607-16928694)
chr8 (1-83)||(1236547-1236634)
chr8 (1-83)||(14585829-14585916)
chr8 (1-83)||(15344460-15344547)
chr8 (1-83)||(15433525-15433612)
chr8 (1-83)||(15524829-15524916)
chr8 (1-83)||(30568171-30568258)
chr8 (1-83)||(33214521-33214608)
chr8 (1-83)||(41896669-41896756)
chr8 (1-82)||(37971435-37971521)
chr8 (1-49)||(10377841-10377889)
chr8 (1-49)||(43833885-43833933)
chr8 (1-83)||(3673593-3673680)
chr8 (1-83)||(7198045-7198132)
chr8 (1-83)||(18890549-18890636)
chr8 (18-81)||(3240549-3240617)
chr8 (1-49)||(9637298-9637346)
chr8 (1-45)||(20553134-20553178)
chr8 (1-49)||(23230795-23230843)
chr8 (1-45)||(25238486-25238530)
chr8 (1-49)||(27110354-27110402)
chr8 (1-83)||(7677133-7677220)
chr8 (1-83)||(42046373-42046460)
chr8 (1-82)||(14916039-14916125)
chr8 (1-49)||(1239286-1239334)
chr8 (1-49)||(16247112-16247160)
chr8 (1-45)||(20559637-20559681)
chr8 (1-45)||(20571199-20571243)
chr8 (1-49)||(24186550-24186598)
chr8 (1-84)||(41060112-41060200)
chr8 (1-44)||(28086706-28086749)
chr8 (1-44)||(29939452-29939495)
chr8 (18-83)||(11725862-11725932)
chr8 (1-47)||(40618964-40619010)
chr8 (1-82)||(45445662-45445748)
chr8 (1-50)||(5046905-5046954)
chr8 (23-83)||(9619189-9619254)
chr8 (31-83)||(24099106-24099163)
chr8 (1-41)||(17427093-17427133)
chr8 (1-41)||(17430743-17430783)
chr8 (47-83)||(21237991-21238027)
chr8 (1-49)||(27498255-27498303)
[»] chr5 (33 HSPs)
chr5 (1-83)||(34945542-34945629)
chr5 (1-83)||(9113577-9113664)
chr5 (1-83)||(13007378-13007465)
chr5 (1-83)||(24229636-24229723)
chr5 (1-83)||(26825579-26825666)
chr5 (1-83)||(28540758-28540845)
chr5 (1-83)||(38597946-38598033)
chr5 (1-83)||(25980306-25980393)
chr5 (1-83)||(2979158-2979245)
chr5 (1-83)||(14211376-14211463)
chr5 (1-83)||(19103319-19103406)
chr5 (1-82)||(6011991-6012077)
chr5 (1-49)||(15571635-15571684)
chr5 (1-49)||(8088103-8088151)
chr5 (1-84)||(14726312-14726400)
chr5 (1-49)||(41630651-41630699)
chr5 (1-83)||(8096350-8096437)
chr5 (1-83)||(14082248-14082335)
chr5 (1-83)||(35850948-35851033)
chr5 (4-45)||(31078314-31078355)
chr5 (4-41)||(32691109-32691146)
chr5 (1-80)||(19121061-19121145)
chr5 (1-45)||(37986008-37986052)
chr5 (1-84)||(39567419-39567507)
chr5 (1-83)||(10332399-10332486)
chr5 (1-83)||(11976787-11976874)
chr5 (1-83)||(13422082-13422169)
chr5 (1-83)||(38007507-38007593)
chr5 (14-83)||(781561-781635)
chr5 (18-83)||(7241961-7242031)
chr5 (18-83)||(7247136-7247206)
chr5 (1-82)||(26877962-26878047)
chr5 (18-83)||(41184272-41184342)
[»] chr2 (47 HSPs)
chr2 (1-83)||(3309105-3309192)
chr2 (1-83)||(4100496-4100582)
chr2 (3-83)||(31788618-31788703)
chr2 (1-83)||(7646638-7646725)
chr2 (1-83)||(17249000-17249087)
chr2 (1-83)||(18763628-18763715)
chr2 (1-84)||(9169109-9169198)
chr2 (1-83)||(4778913-4779000)
chr2 (1-83)||(4903998-4904085)
chr2 (1-83)||(10237069-10237156)
chr2 (1-83)||(36692034-36692121)
chr2 (1-81)||(12554036-12554121)
chr2 (1-49)||(7677765-7677813)
chr2 (9-83)||(19062200-19062279)
chr2 (1-83)||(27097260-27097347)
chr2 (1-83)||(37876459-37876546)
chr2 (1-83)||(43396972-43397058)
chr2 (20-85)||(280977-281047)
chr2 (1-82)||(4041448-4041534)
chr2 (1-82)||(33585589-33585675)
chr2 (1-46)||(32448511-32448556)
chr2 (1-84)||(1421836-1421923)
chr2 (1-45)||(19597999-19598043)
chr2 (8-83)||(35220495-35220575)
chr2 (1-49)||(37416870-37416918)
chr2 (1-83)||(12677304-12677390)
chr2 (1-83)||(29279423-29279510)
chr2 (1-82)||(38445326-38445412)
chr2 (5-50)||(25508959-25509004)
chr2 (1-49)||(37994444-37994492)
chr2 (1-83)||(5427722-5427809)
chr2 (14-84)||(8809452-8809527)
chr2 (1-83)||(10929825-10929912)
chr2 (1-48)||(23933512-23933559)
chr2 (18-83)||(84013-84083)
chr2 (18-83)||(8806045-8806115)
chr2 (18-83)||(27248983-27249053)
chr2 (10-83)||(27949597-27949675)
chr2 (1-82)||(28533808-28533894)
chr2 (18-83)||(40659764-40659834)
chr2 (1-46)||(7604336-7604381)
chr2 (1-46)||(11985128-11985173)
chr2 (1-50)||(41327899-41327948)
chr2 (1-83)||(41694781-41694867)
chr2 (1-49)||(6358773-6358821)
chr2 (1-45)||(33760089-33760133)
chr2 (1-45)||(34335576-34335620)
[»] chr4 (44 HSPs)
chr4 (1-82)||(19853365-19853451)
chr4 (5-83)||(2520953-2521036)
chr4 (1-82)||(48257485-48257571)
chr4 (1-83)||(22611353-22611440)
chr4 (1-83)||(27652113-27652200)
chr4 (1-83)||(32766684-32766771)
chr4 (1-83)||(47320264-47320351)
chr4 (1-83)||(56040498-56040585)
chr4 (4-83)||(31891139-31891223)
chr4 (1-84)||(36194878-36194966)
chr4 (1-83)||(53811198-53811284)
chr4 (1-83)||(35348477-35348564)
chr4 (1-83)||(43510366-43510453)
chr4 (1-83)||(6155072-6155162)
chr4 (1-83)||(24098921-24099006)
chr4 (1-83)||(1621363-1621448)
chr4 (1-49)||(7008880-7008928)
chr4 (1-84)||(26633522-26633610)
chr4 (1-49)||(37030431-37030479)
chr4 (1-79)||(21686098-21686181)
chr4 (1-83)||(29960801-29960888)
chr4 (1-83)||(53444288-53444375)
chr4 (1-82)||(9178523-9178609)
chr4 (1-49)||(10496505-10496553)
chr4 (5-49)||(13634289-13634333)
chr4 (1-49)||(37465652-37465700)
chr4 (1-45)||(42032424-42032468)
chr4 (1-49)||(44596830-44596878)
chr4 (1-49)||(45418682-45418730)
chr4 (1-83)||(28857571-28857658)
chr4 (1-83)||(36204231-36204318)
chr4 (1-43)||(29120276-29120318)
chr4 (1-82)||(36161881-36161967)
chr4 (18-83)||(53616482-53616552)
chr4 (14-83)||(56199279-56199353)
chr4 (1-81)||(11299864-11299949)
chr4 (1-46)||(36184701-36184746)
chr4 (7-83)||(56156494-56156575)
chr4 (1-33)||(4142659-4142691)
chr4 (1-45)||(21662607-21662651)
chr4 (1-45)||(21671371-21671415)
chr4 (1-45)||(22305516-22305560)
chr4 (27-82)||(29966522-29966582)
chr4 (47-83)||(52097748-52097784)
[»] chr1 (48 HSPs)
chr1 (1-83)||(36775562-36775649)
chr1 (1-84)||(29738515-29738603)
chr1 (1-83)||(24583103-24583190)
chr1 (1-83)||(24583299-24583386)
chr1 (1-83)||(31919142-31919229)
chr1 (1-83)||(34878130-34878217)
chr1 (1-83)||(44543425-44543512)
chr1 (1-83)||(48750338-48750425)
chr1 (1-83)||(49627066-49627153)
chr1 (1-82)||(32395151-32395236)
chr1 (3-82)||(49504448-49504532)
chr1 (1-75)||(14872792-14872871)
chr1 (1-83)||(15431518-15431605)
chr1 (1-83)||(19596312-19596399)
chr1 (1-83)||(34412944-34413031)
chr1 (1-83)||(35484243-35484330)
chr1 (1-50)||(5983989-5984038)
chr1 (1-81)||(7836650-7836735)
chr1 (1-81)||(16161981-16162066)
chr1 (1-46)||(19061062-19061107)
chr1 (1-84)||(16989524-16989612)
chr1 (1-84)||(44915792-44915880)
chr1 (1-83)||(7337515-7337602)
chr1 (1-83)||(11462334-11462421)
chr1 (14-84)||(20266477-20266552)
chr1 (1-83)||(45415711-45415798)
chr1 (1-83)||(47133056-47133143)
chr1 (3-45)||(5856064-5856106)
chr1 (1-82)||(13144665-13144751)
chr1 (1-82)||(21947471-21947557)
chr1 (1-82)||(31984314-31984400)
chr1 (1-82)||(51373711-51373797)
chr1 (1-50)||(3228422-3228471)
chr1 (47-83)||(1742491-1742527)
chr1 (1-83)||(4413267-4413354)
chr1 (1-83)||(10776313-10776400)
chr1 (1-83)||(14489425-14489512)
chr1 (14-49)||(27456650-27456685)
chr1 (18-83)||(5701438-5701508)
chr1 (18-83)||(19715727-19715797)
chr1 (1-74)||(27579989-27580067)
chr1 (1-82)||(31317889-31317975)
chr1 (18-83)||(50165931-50166001)
chr1 (1-46)||(6217717-6217762)
chr1 (47-84)||(19723526-19723563)
chr1 (47-84)||(35461905-35461942)
chr1 (1-46)||(46399123-46399168)
chr1 (1-49)||(23291533-23291581)
[»] scaffold0884 (1 HSPs)
scaffold0884 (1-83)||(1825-1912)
[»] scaffold0445 (1 HSPs)
scaffold0445 (1-83)||(1494-1581)
[»] scaffold0026 (1 HSPs)
scaffold0026 (1-79)||(71726-71809)
[»] scaffold0088 (1 HSPs)
scaffold0088 (1-82)||(50926-51012)
[»] scaffold0136 (1 HSPs)
scaffold0136 (1-83)||(9894-9981)
[»] scaffold0127 (1 HSPs)
scaffold0127 (1-83)||(15642-15729)
[»] scaffold0050 (1 HSPs)
scaffold0050 (1-82)||(65895-65981)
[»] scaffold0017 (1 HSPs)
scaffold0017 (1-83)||(32599-32686)
[»] scaffold0009 (1 HSPs)
scaffold0009 (1-83)||(57940-58027)
[»] scaffold0049 (1 HSPs)
scaffold0049 (4-49)||(71191-71236)
[»] scaffold0121 (1 HSPs)
scaffold0121 (1-49)||(31165-31213)


Alignment Details
Target: chr7 (Bit Score: 56; Significance: 3e-23; HSPs: 40)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 8001485 - 8001398
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgg-----gtgagtttattctcagattcaccctttacgtttttag 83  Q
    |||||||||||||||| |||||||||||||||||||||||||||||     |||||||| ||| ||||||||||||||||||||||||    
T  8001485 atcatattatttataggcattttgccgttgtatgctattaacttgggtgctgtgagtttgttcgcagattcaccctttacgtttttag 8001398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 48061574 - 48061661
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttggg-----tgagtttattctcagattcaccctttacgtttttag 83  Q
    |||||||||||| ||| ||||||||||||||||||||||||||||||     ||||||| ||| ||||||||||||||||||||||||    
T  48061574 atcatattatttgtaggcattttgccgttgtatgctattaacttgggtgttatgagtttgttcgcagattcaccctttacgtttttag 48061661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 9977149 - 9977062
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgg-----gtgagtttattctcagattcaccctttacgtttttag 83  Q
    |||||||||||| ||||||||||| |||||||||||||||||||||     |||| ||| ||| ||||||||||||||||||||||||    
T  9977149 atcatattatttttagacattttgtcgttgtatgctattaacttggatgttgtgaattttttcacagattcaccctttacgtttttag 9977062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 28044695 - 28044608
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgg-----gtgagtttattctcagattcaccctttacgtttttag 83  Q
    |||||||||||| |||||||||||||||||||||||||||||||||      ||||||| |||  |||||||||||||||||||||||    
T  28044695 atcatattatttttagacattttgccgttgtatgctattaacttggatgttatgagtttgttcgtagattcaccctttacgtttttag 28044608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 28407857 - 28407770
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgg-----gtgagtttattctcagattcaccctttacgtttttag 83  Q
    |||||||||||| |||||||||||||||||||||||||||||||||     |||||||| ||| |||||| |||||||| ||||||||    
T  28407857 atcatattatttgtagacattttgccgttgtatgctattaacttggatgctgtgagtttgttcgcagatttaccctttatgtttttag 28407770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 34899546 - 34899459
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgg-----gtgagtttattctcagattcaccctttacgtttttag 83  Q
    |||||||||||| ||  |||||||||||||||||||||||||||||     |||||||| ||| ||||||||||||||||||||||||    
T  34899546 atcatattatttgtatgcattttgccgttgtatgctattaacttggatgttgtgagtttgttcgcagattcaccctttacgtttttag 34899459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 39171529 - 39171442
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgggtg-----agtttattctcagattcaccctttacgtttttag 83  Q
    |||||||||||| ||| ||||||||||||||||||||||||||||||||     ||||| ||  ||||||||||||||||||||||||    
T  39171529 atcatattatttgtaggcattttgccgttgtatgctattaacttgggtgctatgagtttgtttgcagattcaccctttacgtttttag 39171442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 35133099 - 35133185
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgg-----gtgagtttattctcagattcaccctttacgttttta 82  Q
    |||||||||||| ||| |||||||||||||||||||||||||||||     |||||||| ||| |||||||||||| ||||||||||    
T  35133099 atcatattatttctaggcattttgccgttgtatgctattaacttgggtgatgtgagtttgttcgcagattcaccctatacgttttta 35133185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 40993309 - 40993396
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgg-----gtgagtttattctcagattcaccctttacgtttttag 83  Q
    |||||||||||| ||| ||||||| ||||||||| |||||||||||     |||||||| ||| ||||||||||||||||||||||||    
T  40993309 atcatattatttgtaggcattttgtcgttgtatgttattaacttgggtgttgtgagtttgttcgcagattcaccctttacgtttttag 40993396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 42978762 - 42978849
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgggtg-----agtttattctcagattcaccctttacgtttttag 83  Q
    |||||||||| | ||| ||||||||||||||||||||||||||||||||     ||||  ||| ||||||||||||||||||||||||    
T  42978762 atcatattatatgtaggcattttgccgttgtatgctattaacttgggtgttgtgagttcgttcgcagattcaccctttacgtttttag 42978849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 45349738 - 45349651
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgg-----gtgagtttattctcagattcaccctttacgtttttag 83  Q
    |||||||||||| ||| |||||||||||| ||||||||||||||||     |||||||| ||| ||| ||||||||||||||||||||    
T  45349738 atcatattatttgtaggcattttgccgttttatgctattaacttgggtgttgtgagtttgttcgcaggttcaccctttacgtttttag 45349651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 48316751 - 48316664
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgg-----gtgagtttattctcagattcaccctttacgtttttag 83  Q
    |||||||||||| ||| ||||||| |||||||||||||||||||||     |||||||| ||| ||||||||||||||| ||||||||    
T  48316751 atcatattatttgtaggcattttgtcgttgtatgctattaacttgggtgctgtgagtttgttcgcagattcaccctttaggtttttag 48316664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 41553373 - 41553286
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgg----gtgagtttattctcagattcaccctttacgtttttagt 84  Q
    ||||||| |||||||   ||||||||||||||||||||||||||||    |||||||| |||  ||||||||||||||||||||||||    
T  41553373 atcatatcatttatacgtattttgccgttgtatgctattaacttggtgctgtgagtttgttcctagattcaccctttacgtttttagt 41553286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 22743096 - 22743183
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgggt-----gagtttattctcagattcaccctttacgtttttag 83  Q
    |||||||||||| | | |||||||||||||||||||||||| ||||||     |||||| ||| |||||||||||| |||||||||||    
T  22743096 atcatattatttgttggcattttgccgttgtatgctattaatttgggtgttgggagttttttcgcagattcaccctatacgtttttag 22743183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 37837397 - 37837310
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgg-----gtgagtttattctcagattcaccctttacgtttttag 83  Q
    ||||||||| || ||| |||||||||||| ||||||||||||||||     |||||||| ||| || |||||||||||||||||||||    
T  37837397 atcatattacttgtaggcattttgccgttttatgctattaacttgggtgctgtgagtttgttcgcatattcaccctttacgtttttag 37837310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 48930859 - 48930946
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgg-----gtgagtttattctcagattcaccctttacgtttttag 83  Q
    |||||||||||| | | |||||||||||||||||||||||||||||     |||||||| ||| |||||||| ||| |||||||||||    
T  48930859 atcatattatttgttggcattttgccgttgtatgctattaacttgggtattgtgagtttgttcgcagattcaacctatacgtttttag 48930946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 12141247 - 12141159
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgg------gtgagtttattctcagattcaccctttacgtttttag 83  Q
    |||||||||||| ||  |||||||||||||||||||||||||||||      |||||||| ||| || ||||||| |||||||||||||    
T  12141247 atcatattatttgtatgcattttgccgttgtatgctattaacttgggttgttgtgagtttgttcgcatattcaccttttacgtttttag 12141159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 43369693 - 43369649
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttg 45  Q
    |||||||||||||||| ||||||||||||||||| ||||||||||    
T  43369693 atcatattatttataggcattttgccgttgtatgatattaacttg 43369649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 46700187 - 46700235
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgggtg 49  Q
    |||||||||||||||| |||||||||||| ||||||||||||| |||||    
T  46700187 atcatattatttataggcattttgccgttatatgctattaactagggtg 46700235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 47590463 - 47590547
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgggtg-----agtttattctcagattcaccctttacgtttt 80  Q
    |||||||||||| ||| ||||||||||||||| ||||||||||||||||     ||||| ||  |||||| ||||||||||||||    
T  47590463 atcatattatttgtaggcattttgccgttgtaagctattaacttgggtgttgtgagtttgtttgcagatttaccctttacgtttt 47590547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 45
Target Start/End: Complemental strand, 3223038 - 3222999
Alignment:
Q  6 attatttatagacattttgccgttgtatgctattaacttg 45  Q
    ||||||||||||||||||||||||||||| ||||||||||    
T  3223038 attatttatagacattttgccgttgtatgttattaacttg 3222999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 38798933 - 38799019
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgg-----gtgagtttattctcagattcaccctttacgttttta 82  Q
    |||||||||||| ||| |||||||||||  ||||||||||||||||     |||||||| ||| |||||||||| | ||||||||||    
T  38798933 atcatattatttgtaggcattttgccgtcttatgctattaacttggatgttgtgagtttgttcgcagattcaccttgtacgttttta 38799019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 13796868 - 13796823
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgg 46  Q
    |||||||||||| ||| ||||||| |||||||||||||||||||||    
T  13796868 atcatattatttgtaggcattttgtcgttgtatgctattaacttgg 13796823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 29617638 - 29617552
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgg----gtgagtttattctcagattcaccctttacgtttttag 83  Q
    |||||||||||| |||||||||||  ||||  ||||||||||||||    |||||||| ||  |||||||||| |||||||||||||    
T  29617638 atcatattatttgtagacattttgttgttgagtgctattaacttggtgttgtgagtttgtttgcagattcaccatttacgtttttag 29617552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 4999968 - 4999920
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgggtg 49  Q
    |||||||||||||||||||||||  ||||||||| |||| |||||||||    
T  4999968 atcatattatttatagacattttttcgttgtatgttattgacttgggtg 4999920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 9450076 - 9450036
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaa 41  Q
    |||||||||||| ||| ||||||||||||||||||||||||    
T  9450076 atcatattatttgtaggcattttgccgttgtatgctattaa 9450036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 19297022 - 19297106
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgg-----gtgagtttattctcagattcaccctttacgtttt 80  Q
    |||||||||||| ||| |||||||| ||| ||||||||||| ||||     |||||||| ||| ||||||||||||||| |||||    
T  19297022 atcatattatttgtaggcattttgctgttatatgctattaatttgggtgttgtgagtttgttcgcagattcaccctttaagtttt 19297106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 31482038 - 31481990
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgggtg 49  Q
    ||||| |||||||||   |||||||||||||||||||||||||||||||    
T  31482038 atcatgttatttataagtattttgccgttgtatgctattaacttgggtg 31481990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 3 - 46
Target Start/End: Complemental strand, 5348529 - 5348486
Alignment:
Q  3 catattatttatagacattttgccgttgtatgctattaacttgg 46  Q
    |||||||||| ||| |||||| ||||||||||||||||||||||    
T  5348529 catattatttgtaggcattttaccgttgtatgctattaacttgg 5348486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 19404696 - 19404609
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgg-----gtgagtttattctcagattcaccctttacgtttttag 83  Q
    |||||||||||| ||| | ||||||||||| | |||||||||||||     |||||||| ||| |||||||| ||||||| |||||||    
T  19404696 atcatattatttgtaggctttttgccgttgcacgctattaacttggatgctgtgagtttgttcgcagattcatcctttacatttttag 19404609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 30756758 - 30756671
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgggtg-----agtttattctcagattcaccctttacgtttttag 83  Q
    |||||||||||||||| ||||||| |||| |||||| ||||||| ||||     ||||  ||| |||||||| |||||||||||||||    
T  30756758 atcatattatttataggcattttgtcgttttatgctgttaacttaggtgttgtaagttagttcgcagattcagcctttacgtttttag 30756671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 84
Target Start/End: Original strand, 35261472 - 35261543
Alignment:
Q  18 cattttgccgttgtatgctattaacttgg-----gtgagtttattctcagattcaccctttacgtttttagt 84  Q
    |||| ||||||||||||||||||||||||     |||||||| ||| |||||||| |||||| |||||||||    
T  35261472 cattatgccgttgtatgctattaacttggatattgtgagtttgttcgcagattcatcctttatgtttttagt 35261543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 35665074 - 35665027
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgggt 48  Q
    |||||||||||| | | ||||||| |||||||||||||||||||||||    
T  35665074 atcatattattttttggcattttgtcgttgtatgctattaacttgggt 35665027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 84
Target Start/End: Original strand, 46822190 - 46822261
Alignment:
Q  18 cattttgccgttgtatgctattaacttgg-----gtgagtttattctcagattcaccctttacgtttttagt 84  Q
    |||| ||||||| ||||||||||||||||     |||||||| ||| |||||||| ||||||||||||||||    
T  46822190 cattatgccgttatatgctattaacttggatgctgtgagtttgttcgcagattcatcctttacgtttttagt 46822261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 24069333 - 24069253
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgggtgagtttattctcagattcaccctttacgtttttag 83  Q
    |||||||||||| ||| ||||||  ||||||||||||||||||| || | |||| |||  |||||||||| ||||||||||||    
T  24069333 atcatattatttgtaggcattttatcgttgtatgctattaactttggcg-gtttgttcggagattcaccc-ttacgtttttag 24069253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 25287125 - 25287083
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaact 43  Q
    |||||||||||| ||| |||||||| |||||||||||||||||    
T  25287125 atcatattatttgtagccattttgctgttgtatgctattaact 25287083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 3398342 - 3398387
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgg 46  Q
    |||||||||||| ||| |||||| |||||||||| |||||||||||    
T  3398342 atcatattatttttaggcattttaccgttgtatgttattaacttgg 3398387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 8 - 49
Target Start/End: Complemental strand, 39328725 - 39328684
Alignment:
Q  8 tatttatagacattttgccgttgtatgctattaacttgggtg 49  Q
    ||||| ||| |||||||||||| |||||||||||||||||||    
T  39328725 tatttgtaggcattttgccgttttatgctattaacttgggtg 39328684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 24770398 - 24770442
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttg 45  Q
    |||||||||||  |||||||||||||||| |||| ||||||||||    
T  24770398 atcatattattggtagacattttgccgttttatgttattaacttg 24770442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 27341705 - 27341745
Alignment:
Q  4 atattatttatagacattttgccgttgtatgctattaactt 44  Q
    ||||||||| ||| |||||||||||| ||||||||||||||    
T  27341705 atattatttgtaggcattttgccgttatatgctattaactt 27341745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 56; Significance: 3e-23; HSPs: 34)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 67940 - 67853
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgg-----gtgagtttattctcagattcaccctttacgtttttag 83  Q
    |||||||||||||||| |||||||||||||||||||||||||||||     |||||||| ||| ||||||||||||||||||||||||    
T  67940 atcatattatttataggcattttgccgttgtatgctattaacttgggtgctgtgagtttgttcgcagattcaccctttacgtttttag 67853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 33053107 - 33053020
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgg-----gtgagtttattctcagattcaccctttacgtttttag 83  Q
    |||||||||||| ||| |||||||||||||||||||||||||||||     |||||||| ||| || |||||||||||||||||||||    
T  33053107 atcatattatttgtaggcattttgccgttgtatgctattaacttggatgctgtgagtttgttcgcatattcaccctttacgtttttag 33053020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 606355 - 606441
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgg-----gtgagtttattctcagattcaccctttacgttttta 82  Q
    |||||||||||| ||| ||||||||| |||||||||||||||||||     |||||||| ||| |||||||||||||||||||||||    
T  606355 atcatattatttgtaggcattttgccattgtatgctattaacttgggtgctgtgagtttgttcgcagattcaccctttacgttttta 606441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 4 - 83
Target Start/End: Complemental strand, 21426622 - 21426538
Alignment:
Q  4 atattatttatagacattttgccgttgtatgctattaacttgg-----gtgagtttattctcagattcaccctttacgtttttag 83  Q
    ||||||||| |||||||||||||||||||||||||||||||||     |||||||| ||| || ||||||| |||||||||||||    
T  21426622 atattatttgtagacattttgccgttgtatgctattaacttgggtgctgtgagtttgttcgcatattcaccgtttacgtttttag 21426538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 546182 - 546269
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgg-----gtgagtttattctcagattcaccctttacgtttttag 83  Q
    |||||||||||| ||| |||||||||||||||||||||||||||||     |||||||| ||| |||||||| ||| |||||||||||    
T  546182 atcatattatttgtaggcattttgccgttgtatgctattaacttgggtgctgtgagtttgttcgcagattcatcctatacgtttttag 546269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 3913513 - 3913426
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgg-----gtgagtttattctcagattcaccctttacgtttttag 83  Q
    |||||||||||| ||| ||||||||| |||||||||||||||||||     |||||||| ||| ||||| ||||||||||||||||||    
T  3913513 atcatattatttgtaggcattttgccattgtatgctattaacttgggtgttgtgagtttgttcgcagatgcaccctttacgtttttag 3913426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 9341590 - 9341503
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgg-----gtgagtttattctcagattcaccctttacgtttttag 83  Q
    |||||||| ||| ||| ||||||| |||||||||||||||||||||     |||||||| ||| ||||||||||||||||||||||||    
T  9341590 atcatattgtttgtaggcattttgtcgttgtatgctattaacttgggtgttgtgagtttgttcgcagattcaccctttacgtttttag 9341503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 23128769 - 23128856
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgg-----gtgagtttattctcagattcaccctttacgtttttag 83  Q
    |||||||||||| ||| |||||||||||||||||||||||| ||||     |||||||| ||| |||||||||||||||| |||||||    
T  23128769 atcatattatttgtaggcattttgccgttgtatgctattaatttgggtgctgtgagtttgttcgcagattcaccctttacatttttag 23128856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 30776814 - 30776901
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgg-----gtgagtttattctcagattcaccctttacgtttttag 83  Q
    |||||||||||| ||| ||||||||||| | |||||||||||||||     |||||||| ||| ||||||||||||||||||||||||    
T  30776814 atcatattatttgtaggcattttgccgtggaatgctattaacttgggtgttgtgagtttgttcgcagattcaccctttacgtttttag 30776901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 14801978 - 14802066
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgg-----gtgagtttattctcagattcaccct-ttacgtttttag 83  Q
    |||||||||||| ||| |||||||||||||||||||||||||||||     |||||||| ||| ||||||||| || ||||||||||||    
T  14801978 atcatattatttgtaggcattttgccgttgtatgctattaacttggatgctgtgagtttgttcgcagattcactctattacgtttttag 14802066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 12170619 - 12170667
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgggtg 49  Q
    |||||||||||| ||| |||||||| |||||||||||||||||||||||    
T  12170619 atcatattatttgtaggcattttgctgttgtatgctattaacttgggtg 12170667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 29743148 - 29743238
Alignment:
Q  1 atcatattatttatagacattttgccgttgta---tgctattaacttgg-----gtgagtttattctcagattcaccctttacgtttttag 83  Q
    |||||||||||||||| ||||||| |||||||   || |||||||||||     |||||||| |||||| |||||||||||||||||||||    
T  29743148 atcatattatttataggcattttgtcgttgtaatatgttattaacttggttgttgtgagtttgttctcaaattcaccctttacgtttttag 29743238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 1704071 - 1704028
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaactt 44  Q
    |||||||||||||||||||||||| ||||||| |||||||||||    
T  1704071 atcatattatttatagacattttgtcgttgtacgctattaactt 1704028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 7515141 - 7515054
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgg-----gtgagtttattctcagattcaccctttacgtttttag 83  Q
    |||||||||||| ||| |||||| | | ||||||||||||||||||     |||||||| ||| || |||||||||||||||||||||    
T  7515141 atcatattatttgtaggcatttttctgctgtatgctattaacttggtttctgtgagtttgttcgcaaattcaccctttacgtttttag 7515054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 20226002 - 20226049
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgggt 48  Q
    |||||||||||| ||| ||||||| |||||||||||||||||||||||    
T  20226002 atcatattatttgtaggcattttgtcgttgtatgctattaacttgggt 20226049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 22119986 - 22120033
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgggt 48  Q
    |||||||||||| ||| ||||||| |||||||||||||||||||||||    
T  22119986 atcatattatttgtaggcattttgtcgttgtatgctattaacttgggt 22120033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 26588411 - 26588324
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgg-----gtgagtttattctcagattcaccctttacgtttttag 83  Q
    |||||||||||| |||||||||||| |||||||||| |||||||||     |||||||| ||  ||| ||||||||||| ||||||||    
T  26588411 atcatattatttttagacattttgctgttgtatgctcttaacttggatgtcgtgagtttgtttgcagcttcaccctttaagtttttag 26588324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 29255385 - 29255298
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgg-----gtgagtttattctcagattcaccctttacgtttttag 83  Q
    |||||||||||| ||| |||||  | ||||||||||||||||||||     |||||||| ||| ||||||||||| ||||||||||||    
T  29255385 atcatattatttgtaggcatttcactgttgtatgctattaacttgggtgttgtgagtttgttcacagattcacccattacgtttttag 29255298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 30493683 - 30493770
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgggtg-----agtttattctcagattcaccctttacgtttttag 83  Q
    ||||| || ||| ||| ||||||||||||||||||||||||| ||||||     | ||| ||| ||||||||||||||||||||||||    
T  30493683 atcatgttgtttgtaggcattttgccgttgtatgctattaacctgggtgttgtgaatttgttcgcagattcaccctttacgtttttag 30493770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 30894750 - 30894836
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgg-----gtgagtttattctcagattcaccctttacgtttttag 83  Q
    |||||||||||| ||| |||||||| |||||||||||| |||||||     |||||||||||  |||||||| |||||||||||||||    
T  30894750 atcatattatttgtagtcattttgctgttgtatgctatcaacttggatgctgtgagtttatt-gcagattcatcctttacgtttttag 30894836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 10 - 83
Target Start/End: Complemental strand, 33740488 - 33740410
Alignment:
Q  10 tttatagacattttgccgttgtatgctattaacttgg-----gtgagtttattctcagattcaccctttacgtttttag 83  Q
    ||||||| |||| ||||||| ||||||||||||||||     |||||||| ||| |||||||| |||||||||||||||    
T  33740488 tttataggcattatgccgttatatgctattaacttggataatgtgagtttgttcgcagattcatcctttacgtttttag 33740410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 30608454 - 30608409
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgg 46  Q
    |||||||||||| ||| |||||| ||||||||||||||||||||||    
T  30608454 atcatattatttgtaggcattttaccgttgtatgctattaacttgg 30608409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 32327156 - 32327072
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgggtg-----agtttattctcagattcaccctttacgtttttag 83  Q
    |||||||||||| ||| |||||||||||   ||||||||||||||||||     ||||| ||| || |||||||||||||||||||||    
T  32327156 atcatattatttgtaggcattttgccgt---atgctattaacttgggtgctgtgagtttgttcgcatattcaccctttacgtttttag 32327072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 127820 - 127905
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgg-----gtgagtttattctcagattcaccctttacgtttttag 83  Q
    |||||||||||| ||| |||||||||||||  ||||||||||||||     |||||||| ||| || ||||||| |||||||||||||    
T  127820 atcatattatttgtaggcattttgccgttg--tgctattaacttggttgctgtgagtttgttcacatattcaccttttacgtttttag 127905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 83
Target Start/End: Original strand, 8497129 - 8497213
Alignment:
Q  4 atattatttatagacattttgccgttgtatgctattaacttgg-----gtgagtttattctcagattcaccctttacgtttttag 83  Q
    ||||| ||| ||| |||| ||||||| ||||||||||||||||     |||||||| ||| |||||||| |||||||||||||||    
T  8497129 atattttttgtaggcattatgccgttatatgctattaacttggatgctgtgagtttgttcgcagattcatcctttacgtttttag 8497213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 31852132 - 31852092
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaa 41  Q
    ||||||||||||||||||||||||  |||||||||||||||    
T  31852132 atcatattatttatagacattttgttgttgtatgctattaa 31852092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 1523559 - 1523638
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgggtgagtttattctcagattcaccctttacgtttt 80  Q
    |||||||||||| ||| ||||||| ||| | |||||||||||||||||||  |  ||| || ||||| ||||||||||||    
T  1523559 atcatattatttgtaggcattttgtcgtggaatgctattaacttgggtgacgtggttcgcaaattcatcctttacgtttt 1523638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 8102877 - 8102964
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgggtg-----agtttattctcagattcaccctttacgtttttag 83  Q
    |||||||||||| ||| ||||||||||| | ||| ||||||||||||||     ||||| ||  |||||||||| |||||||||||||    
T  8102877 atcatattatttgtaggcattttgccgtggaatgttattaacttgggtgctgtgagtttgtttgcagattcaccttttacgtttttag 8102964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 14175010 - 14174923
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttg-----ggtgagtttattctcagattcaccctttacgtttttag 83  Q
    |||||||||||| ||| |||||| ||||| |||||| ||||||||      |||||||| ||| |||||||||| |||||||||||||    
T  14175010 atcatattatttgtaggcatttttccgttttatgctgttaacttgagtgatgtgagtttgttcgcagattcaccttttacgtttttag 14174923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 14179546 - 14179459
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttg-----ggtgagtttattctcagattcaccctttacgtttttag 83  Q
    |||||||||||| ||| |||||| ||||| |||||| ||||||||      |||||||| ||| |||||||||| |||||||||||||    
T  14179546 atcatattatttgtaggcatttttccgttttatgctgttaacttgagtgatgtgagtttgttcgcagattcaccttttacgtttttag 14179459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 14846160 - 14846113
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgggt 48  Q
    |||||||||||| ||| |||||||| ||| ||||||||||||||||||    
T  14846160 atcatattatttgtaggcattttgctgttttatgctattaacttgggt 14846113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 40
Target Start/End: Complemental strand, 3688768 - 3688730
Alignment:
Q  2 tcatattatttatagacattttgccgttgtatgctatta 40  Q
    |||||||||||||||| ||||| ||||||||||||||||    
T  3688768 tcatattatttatagatattttaccgttgtatgctatta 3688730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 75
Target Start/End: Original strand, 4468733 - 4468789
Alignment:
Q  18 cattttgccgttgtatgctattaacttgggtgagtttattctcagattcaccctttac 75  Q
    |||| ||||||| |||||||||||||| ||||||||| ||| |||||||| |||||||    
T  4468733 cattatgccgttatatgctattaactt-ggtgagtttgttcgcagattcatcctttac 4468789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 83
Target Start/End: Original strand, 6957343 - 6957379
Alignment:
Q  47 gtgagtttattctcagattcaccctttacgtttttag 83  Q
    |||||||| ||| ||||||||||||||||||||||||    
T  6957343 gtgagtttgttcacagattcaccctttacgtttttag 6957379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 56; Significance: 3e-23; HSPs: 55)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 45568384 - 45568297
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgg-----gtgagtttattctcagattcaccctttacgtttttag 83  Q
    |||||||||||| ||| |||||||||||||||||||||||||||||     |||||||||||| ||||||||||||||||||||||||    
T  45568384 atcatattatttgtaggcattttgccgttgtatgctattaacttgggtgatgtgagtttattcgcagattcaccctttacgtttttag 45568297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 38545948 - 38546036
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgggt-----gagtttattctcagattcaccctttacgtttttagt 84  Q
    |||||||||||| ||| |||||||||||| ||||||||||||||||||     |||||| ||| |||||||||||||||||||||||||    
T  38545948 atcatattatttgtaggcattttgccgttttatgctattaacttgggtggtgggagtttgttcccagattcaccctttacgtttttagt 38546036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 9998616 - 9998703
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgggtg-----agtttattctcagattcaccctttacgtttttag 83  Q
    |||||||||||| ||| ||||||||||||||||||||||||||||||||     ||||| |||  |||||||||||||||||||||||    
T  9998616 atcatattatttgtaggcattttgccgttgtatgctattaacttgggtgctgtgagtttgttcgtagattcaccctttacgtttttag 9998703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 10108385 - 10108472
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgggtg-----agtttattctcagattcaccctttacgtttttag 83  Q
    |||||||||||| ||| ||||||||||||||||||||||||||||||||     ||||| |||  |||||||||||||||||||||||    
T  10108385 atcatattatttgtaggcattttgccgttgtatgctattaacttgggtgctgtgagtttgttcgtagattcaccctttacgtttttag 10108472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 10229625 - 10229712
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgggtg-----agtttattctcagattcaccctttacgtttttag 83  Q
    |||||||||||| ||| ||||||||||||||||||||||||||||||||     ||||| |||  |||||||||||||||||||||||    
T  10229625 atcatattatttgtaggcattttgccgttgtatgctattaacttgggtgctgtgagtttgttcgtagattcaccctttacgtttttag 10229712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 21289753 - 21289666
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgg-----gtgagtttattctcagattcaccctttacgtttttag 83  Q
    |||||||||||| ||| |||||||||||||||||||||||||||||     |||||||| ||| |||||||||||| |||||||||||    
T  21289753 atcatattatttgtaggcattttgccgttgtatgctattaacttgggtgctgtgagtttgttcgcagattcaccctatacgtttttag 21289666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 44959912 - 44959825
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgg-----gtgagtttattctcagattcaccctttacgtttttag 83  Q
    |||||||||||| ||| ||||||||| |||||||||||||||||||     |||||||||||  ||||||||||||||||||||||||    
T  44959912 atcatattatttgtaggcattttgccattgtatgctattaacttggatgctgtgagtttatttgcagattcaccctttacgtttttag 44959825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 48650673 - 48650586
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgg-----gtgagtttattctcagattcaccctttacgtttttag 83  Q
    |||||||||||| ||| |||||||||||||||||||||||||||||     |||||||| ||| |||||||||||||||| |||||||    
T  48650673 atcatattatttgtaggcattttgccgttgtatgctattaacttgggtgttgtgagtttgttcgcagattcaccctttacatttttag 48650586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 52923056 - 52922969
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgg-----gtgagtttattctcagattcaccctttacgtttttag 83  Q
    |||||||||||| ||| |||||| ||||||||||||||||||||||     |||||||| ||| ||||||||||||||||||||||||    
T  52923056 atcatattatttgtaggcattttaccgttgtatgctattaacttggctgctgtgagtttgttcgcagattcaccctttacgtttttag 52922969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 53807797 - 53807710
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgg-----gtgagtttattctcagattcaccctttacgtttttag 83  Q
    |||||||||||| ||| |||||||||||||||||||||||||||||     |||||||| ||| |||||||| |||||||||||||||    
T  53807797 atcatattatttgtaggcattttgccgttgtatgctattaacttgggtggtgtgagtttgttcgcagattcatcctttacgtttttag 53807710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 33580029 - 33580117
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgggtg-----agtttattctcagattcaccctttacgtttttagt 84  Q
    |||||||||||| ||| |||||||||||| |||||||||||||||||||     | ||| ||| |||||||||||||||||||||||||    
T  33580029 atcatattatttgtaggcattttgccgttttatgctattaacttgggtgttgtgattttgttcgcagattcaccctttacgtttttagt 33580117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 51303582 - 51303494
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgg-----gtgagtttattctcagattcaccctttacgtttttagt 84  Q
    |||||||||||| ||| |||||||||||||||||||||||||||||     |||||||| ||| |||||||||| | ||||||||||||    
T  51303582 atcatattatttgtaggcattttgccgttgtatgctattaacttgggtgttgtgagtttgttcgcagattcaccatatacgtttttagt 51303494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 628862 - 628775
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgg-----gtgagtttattctcagattcaccctttacgtttttag 83  Q
    |||||||||||| ||| |||||||||||||||| ||||||||||||     |||||||| ||| |||||||| |||||||||||||||    
T  628862 atcatattatttgtaggcattttgccgttgtattctattaacttgggtgttgtgagtttgttcgcagattcatcctttacgtttttag 628775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 6954635 - 6954548
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgggtg-----agtttattctcagattcaccctttacgtttttag 83  Q
    |||| ||||||| ||| ||||||||||||||||||||||||||||||||     ||||| ||  ||||||||||||||||||||||||    
T  6954635 atcaaattatttgtaggcattttgccgttgtatgctattaacttgggtgctgtgagtttgtttgcagattcaccctttacgtttttag 6954548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 21313185 - 21313272
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgggtg-----agtttattctcagattcaccctttacgtttttag 83  Q
    |||||||||||| ||| ||||||||||||||||||||||||||||||||     ||||| |||  ||||||||||||||| |||||||    
T  21313185 atcatattatttgtagccattttgccgttgtatgctattaacttgggtgctgtgagtttgttcggagattcaccctttacatttttag 21313272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 21533748 - 21533661
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgg-----gtgagtttattctcagattcaccctttacgtttttag 83  Q
    |||||||||||| ||| |||||||||||||||||||||||||||||     |||||||| ||| |||||| ||| |||||||||||||    
T  21533748 atcatattatttgtaggcattttgccgttgtatgctattaacttgggtgctgtgagtttgttcgcagatttaccttttacgtttttag 21533661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 43017037 - 43017124
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgg-----gtgagtttattctcagattcaccctttacgtttttag 83  Q
    |||||||||||| ||| ||||||||||||||||||||||||||| |     |||||||||||| || ||||| |||||||||||||||    
T  43017037 atcatattatttgtaggcattttgccgttgtatgctattaacttaggtgttgtgagtttattcacatattcatcctttacgtttttag 43017124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 7448853 - 7448767
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgg-----gtgagtttattctcagattcaccctttacgttttta 82  Q
    |||||||||||| |||||||||||||| |||||||||||||||| |     |||||||| ||| |||||||||| ||||||||||||    
T  7448853 atcatattatttgtagacattttgccgctgtatgctattaacttaggtgatgtgagtttgttcgcagattcaccatttacgttttta 7448767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 7456995 - 7456909
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgg-----gtgagtttattctcagattcaccctttacgttttta 82  Q
    |||||||||||| |||||||||||||| |||||||||||||||| |     |||||||| ||| |||||||||| ||||||||||||    
T  7456995 atcatattatttgtagacattttgccgctgtatgctattaacttaggtgatgtgagtttgttcgcagattcaccatttacgttttta 7456909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 4711631 - 4711679
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgggtg 49  Q
    |||||||||||| ||| ||||||||||||||||||||||||||||||||    
T  4711631 atcatattatttgtaggcattttgccgttgtatgctattaacttgggtg 4711679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 7546764 - 7546812
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgggtg 49  Q
    |||||||||||| ||| ||||||||||||||||||||||||||||||||    
T  7546764 atcatattatttgtaggcattttgccgttgtatgctattaacttgggtg 7546812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 10233219 - 10233267
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgggtg 49  Q
    |||||||||||| ||| ||||||||||||||||||||||||||||||||    
T  10233219 atcatattatttgtaggcattttgccgttgtatgctattaacttgggtg 10233267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 38860051 - 38860003
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgggtg 49  Q
    |||||||||||| ||| ||||||||||||||||||||||||||||||||    
T  38860051 atcatattatttgtaggcattttgccgttgtatgctattaacttgggtg 38860003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 51923876 - 51923924
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgggtg 49  Q
    |||||||||||| ||| ||||||||||||||||||||||||||||||||    
T  51923876 atcatattatttgtaggcattttgccgttgtatgctattaacttgggtg 51923924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 8914861 - 8914948
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttg-----ggtgagtttattctcagattcaccctttacgtttttag 83  Q
    |||||||||||| ||| ||||||||||||||||||||||||||||      |||||||| ||| |||||||||| | |||||||||||    
T  8914861 atcatattatttgtaggcattttgccgttgtatgctattaacttgagtgatgtgagtttgttcgcagattcaccttatacgtttttag 8914948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 21431762 - 21431849
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgggtg-----agtttattctcagattcaccctttacgtttttag 83  Q
    |||||||||||| ||| ||||||||||||||||| ||||||||||||||     || || ||| |||||||||| |||||||||||||    
T  21431762 atcatattatttgtaggcattttgccgttgtatgatattaacttgggtgctgtgagattgttcgcagattcaccatttacgtttttag 21431849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 27706165 - 27706078
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgggtg-----agtttattctcagattcaccctttacgtttttag 83  Q
    |||||||||||| ||| ||||||| ||||||||||||||||||||||||     ||||| ||| ||||||| |||| |||||||||||    
T  27706165 atcatattatttgtaggcattttgtcgttgtatgctattaacttgggtgctgttagtttgttcccagattcgccctatacgtttttag 27706078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 40556851 - 40556938
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgg-----gtgagtttattctcagattcaccctttacgtttttag 83  Q
    |||||||||||| ||| |||||||||||||||||||||  ||||||     |||||||| ||| ||||||||||||||| ||||||||    
T  40556851 atcatattatttgtaggcattttgccgttgtatgctatgcacttgggtgttgtgagtttgttcgcagattcaccctttatgtttttag 40556938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 46304459 - 46304372
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttg-----ggtgagtttattctcagattcaccctttacgtttttag 83  Q
    |||||||||| | ||| ||| ||||||||||||||||||||||||      |||||||| ||| ||||||||||||||||||||||||    
T  46304459 atcatattatatgtaggcatgttgccgttgtatgctattaacttgagtgttgtgagtttgttcgcagattcaccctttacgtttttag 46304372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 50194274 - 50194187
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgg-----gtgagtttattctcagattcaccctttacgtttttag 83  Q
    |||||||| ||| ||| |||||||||||| ||||||||||||||||     |||||||| ||| |||||||| |||||||||||||||    
T  50194274 atcatattttttgtaggcattttgccgttatatgctattaacttggatgttgtgagtttgttcgcagattcatcctttacgtttttag 50194187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 9797473 - 9797425
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgggtg 49  Q
    |||||||||||| ||| ||||||| ||||||||||||||||||||||||    
T  9797473 atcatattatttgtaggcattttgtcgttgtatgctattaacttgggtg 9797425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 23799849 - 23799801
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgggtg 49  Q
    |||||||||||| ||| ||||||||||||||||| ||||||||||||||    
T  23799849 atcatattatttgtaggcattttgccgttgtatgttattaacttgggtg 23799801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 16235575 - 16235662
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgg-----gtgagtttattctcagattcaccctttacgtttttag 83  Q
    ||||||||| || ||| ||||||| |||||||||||||||||||||     |||||||| ||| |||||| ||||| |||||||||||    
T  16235575 atcatattacttgtaggcattttgtcgttgtatgctattaacttggatggtgtgagtttgttcgcagatttaccctatacgtttttag 16235662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 27856314 - 27856401
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgg-----gtgagtttattctcagattcaccctttacgtttttag 83  Q
    |||||||||||| ||| |||||| |||||| |||||||||||||||     |||||||| ||| |||||||| | |||||||||||||    
T  27856314 atcatattatttgtaggcatttttccgttgcatgctattaacttggatgatgtgagtttgttcgcagattcatcttttacgtttttag 27856401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 42460898 - 42460977
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgg-----gtgagtttattctcagattcaccctttac 75  Q
    |||||||||||| ||| |||||||  ||||||||||||||||||||     |||||||| ||| ||||||||||||||||    
T  42460898 atcatattatttgtaggcattttgttgttgtatgctattaacttgggtactgtgagtttgttcgcagattcaccctttac 42460977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 19619862 - 19619904
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaact 43  Q
    |||||||||||| ||| ||||||||||||||||||||||||||    
T  19619862 atcatattatttgtaggcattttgccgttgtatgctattaact 19619904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 29922206 - 29922291
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgg-----gtgagtttattctcagattcaccctttacgttttta 82  Q
    |||||||| ||| ||| |||||||||||||||||||||||||||||     |||||||| ||| ||||||| ||| |||||||||||    
T  29922206 atcatattgtttgtaggcattttgccgttgtatgctattaacttggaaaatgtgagtttgttcgcagattc-cccattacgttttta 29922291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 29971359 - 29971444
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgg-----gtgagtttattctcagattcaccctttacgttttta 82  Q
    |||||||| ||| ||| |||||||||||||||||||||||||||||     |||||||| ||| ||||||| ||| |||||||||||    
T  29971359 atcatattgtttgtaggcattttgccgttgtatgctattaacttggaaaatgtgagtttgttcgcagattc-cccattacgttttta 29971444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 20987694 - 20987649
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgg 46  Q
    |||||||||||| ||| |||||||| ||||||||||||||||||||    
T  20987694 atcatattatttgtaggcattttgcagttgtatgctattaacttgg 20987649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 3085240 - 3085192
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgggtg 49  Q
    |||||||||||| ||| ||||||||||||||| |||||||| |||||||    
T  3085240 atcatattatttgtaggcattttgccgttgtaggctattaaattgggtg 3085192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 9173897 - 9173980
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgg-----gtgagtttattctcagattcaccctttacgtttt 80  Q
    |||||||||||| ||| ||||||||||||||||| ||||||||| |     |||||||| ||| || ||||||||||||||||||    
T  9173897 atcatattatttgtaggcattttgccgttgtatgttattaacttaggttccgtgagttt-ttcgcatattcaccctttacgtttt 9173980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 40487474 - 40487522
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgggtg 49  Q
    |||||||||||| ||| |||||||||||| |||| ||||||||||||||    
T  40487474 atcatattatttgtaggcattttgccgttatatgttattaacttgggtg 40487522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 43488529 - 43488481
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgggtg 49  Q
    |||||||||||| ||| | |||||||||||||||||||||| |||||||    
T  43488529 atcatattatttttaggctttttgccgttgtatgctattaatttgggtg 43488481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 54149140 - 54149227
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgggtga-----gtttattctcagattcaccctttacgtttttag 83  Q
    |||||||||||| ||| |||| || ||||||||||||||||| |||||||     |||  ||| ||| ||||||||||||||||||||    
T  54149140 atcatattatttgtaggcattatgtcgttgtatgctattaacctgggtgatgtgagttagttcgcaggttcaccctttacgtttttag 54149227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 83
Target Start/End: Original strand, 12116270 - 12116340
Alignment:
Q  18 cattttgccgttgtatgctattaacttgg-----gtgagtttattctcagattcaccctttacgtttttag 83  Q
    |||| ||||||| ||||||||||||||||     |||||||| |||| ||||||| |||||||||||||||    
T  12116270 cattatgccgttatatgctattaacttggatgttgtgagtttgttcttagattcatcctttacgtttttag 12116340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 83
Target Start/End: Original strand, 36906294 - 36906364
Alignment:
Q  18 cattttgccgttgtatgctattaacttgg-----gtgagtttattctcagattcaccctttacgtttttag 83  Q
    |||| ||||||| ||||||||||||||||     |||||||| ||| |||||||| |||||||||||||||    
T  36906294 cattatgccgttatatgctattaacttggatgatgtgagtttgttcgcagattcatcctttacgtttttag 36906364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 39917300 - 39917230
Alignment:
Q  18 cattttgccgttgtatgctattaacttgg-----gtgagtttattctcagattcaccctttacgtttttag 83  Q
    |||| |||| || ||||||||||||||||     |||||||||||| |||||||| |||||||||||||||    
T  39917300 cattatgcctttatatgctattaacttggatgttgtgagtttattcacagattcatcctttacgtttttag 39917230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 4821955 - 4822004
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgggtga 50  Q
    |||||||| ||| ||| |||||||| ||| ||||||||||||||||||||    
T  4821955 atcatattttttgtaggcattttgctgttatatgctattaacttgggtga 4822004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 83
Target Start/End: Complemental strand, 3848831 - 3848751
Alignment:
Q  8 tatttatagacattttgccgttgtatgctattaacttgg-----gtgagtttattctcagattcaccctttacgtttttag 83  Q
    ||||| ||| |||| ||||| | ||||||||||||||||     |||||||| ||| |||||||| |||||||||||||||    
T  3848831 tatttgtaggcattatgccgctatatgctattaacttggatgctgtgagtttgttcgcagattcatcctttacgtttttag 3848751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 7792126 - 7792078
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgggtg 49  Q
    |||||||||||| ||| ||||||||| ||||| ||||||||||| ||||    
T  7792126 atcatattatttgtaggcattttgccattgtaagctattaacttaggtg 7792078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 12946906 - 12946858
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgggtg 49  Q
    |||||||| ||| ||| ||||||||| || |||||||||||||||||||    
T  12946906 atcatattttttgtaggcattttgcccttatatgctattaacttgggtg 12946858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 19862267 - 19862227
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaa 41  Q
    ||||||||||||| |||||||||| |||| |||||||||||    
T  19862267 atcatattatttagagacattttgtcgttatatgctattaa 19862227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 26739296 - 26739252
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttg 45  Q
    |||||||||||| ||  ||||||| ||||||||||||||||||||    
T  26739296 atcatattatttgtaagcattttggcgttgtatgctattaacttg 26739252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 83
Target Start/End: Original strand, 32701643 - 32701727
Alignment:
Q  4 atattatttatagacattttgccgttgtatgctattaacttgg-----gtgagtttattctcagattcaccctttacgtttttag 83  Q
    ||||||| | ||| ||||||||||||||||||||| |||||||     |||||||| ||| |||||||||| ||||  |||||||    
T  32701643 atattatctgtaggcattttgccgttgtatgctatgaacttggatgctgtgagtttgttcgcagattcaccttttatatttttag 32701727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 46220812 - 46220860
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgggtg 49  Q
    |||||||||||| ||| |||||| ||||||||||| ||||| |||||||    
T  46220812 atcatattatttgtaggcattttaccgttgtatgccattaatttgggtg 46220860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 52; Significance: 6e-21; HSPs: 44)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 31013545 - 31013458
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgg-----gtgagtttattctcagattcaccctttacgtttttag 83  Q
    |||||||||||| ||| |||||||||||||||||||||||||||||     |||||||| ||| ||||||||||||||||||||||||    
T  31013545 atcatattatttgtaggcattttgccgttgtatgctattaacttgggtgttgtgagtttgttcgcagattcaccctttacgtttttag 31013458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 7883178 - 7883091
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgg-----gtgagtttattctcagattcaccctttacgtttttag 83  Q
    |||||||||||| ||| |||||||||||||||| ||||||||||||     |||||||| ||| ||||||||||||||||||||||||    
T  7883178 atcatattatttgtaggcattttgccgttgtatcctattaacttgggtgctgtgagtttgttcgcagattcaccctttacgtttttag 7883091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 16928694 - 16928607
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgg-----gtgagtttattctcagattcaccctttacgtttttag 83  Q
    |||||||||||| ||| ||||||||| |||||||||||||||||||     |||||||| ||| ||||||||||||||||||||||||    
T  16928694 atcatattatttgtaggcattttgccattgtatgctattaacttgggtgttgtgagtttgttcgcagattcaccctttacgtttttag 16928607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 1236634 - 1236547
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgg-----gtgagtttattctcagattcaccctttacgtttttag 83  Q
    |||||| ||||| ||| |||||||||||||||||||||||||||||     |||||||| ||| |||||||| |||||||||||||||    
T  1236634 atcatactatttttaggcattttgccgttgtatgctattaacttgggtgctgtgagtttgttcgcagattcatcctttacgtttttag 1236547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 14585829 - 14585916
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgg-----gtgagtttattctcagattcaccctttacgtttttag 83  Q
    |||||||||||| ||| | |||||||||||||||||||||||||||     |||||||| ||| |||||||||||| |||||||||||    
T  14585829 atcatattatttgtaggcgttttgccgttgtatgctattaacttgggtgctgtgagtttgttcgcagattcaccctatacgtttttag 14585916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 15344460 - 15344547
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgg-----gtgagtttattctcagattcaccctttacgtttttag 83  Q
    |||||||||||| ||| ||||||| |||||||||||||||||||||     |||||||| ||| |||||||| |||||||||||||||    
T  15344460 atcatattatttgtaggcattttgtcgttgtatgctattaacttgggtgctgtgagtttgttcgcagattcatcctttacgtttttag 15344547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 15433525 - 15433612
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgg-----gtgagtttattctcagattcaccctttacgtttttag 83  Q
    |||||||||||| ||| ||||||| |||||||||||||||||||||     |||||||| ||| |||||||| |||||||||||||||    
T  15433525 atcatattatttgtaggcattttgtcgttgtatgctattaacttgggtgctgtgagtttgttcgcagattcatcctttacgtttttag 15433612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 15524829 - 15524916
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgg-----gtgagtttattctcagattcaccctttacgtttttag 83  Q
    |||||||||||| ||| ||||||| |||||||||||||||||||||     |||||||| ||| |||||||| |||||||||||||||    
T  15524829 atcatattatttgtaggcattttgtcgttgtatgctattaacttgggtgctgtgagtttgttcgcagattcatcctttacgtttttag 15524916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 30568258 - 30568171
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgg-----gtgagtttattctcagattcaccctttacgtttttag 83  Q
    ||||| |||||| ||| |||||||||||| ||||||||||||||||     |||||||| ||| ||||||||||||||||||||||||    
T  30568258 atcatgttatttgtaggcattttgccgttttatgctattaacttgggtgttgtgagtttgttcgcagattcaccctttacgtttttag 30568171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 33214608 - 33214521
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgggtg-----agtttattctcagattcaccctttacgtttttag 83  Q
    |||||||||||| |||||||||||||||| |||||||||||||| ||||     ||||| |||  |||||||||||||||||||||||    
T  33214608 atcatattatttttagacattttgccgttttatgctattaactttggtgctgttagtttgttcgtagattcaccctttacgtttttag 33214521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 41896669 - 41896756
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgg-----gtgagtttattctcagattcaccctttacgtttttag 83  Q
    |||||||||||| ||| ||||||| |||||||||||||||||||||     |||||||| ||| |||||||||||| |||||||||||    
T  41896669 atcatattatttgtaggcattttgtcgttgtatgctattaacttgggtgttgtgagtttgttcgcagattcaccctatacgtttttag 41896756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 37971435 - 37971521
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgg-----gtgagtttattctcagattcaccctttacgttttta 82  Q
    |||| ||||||| ||| |||||||||||||||||||||||||||||     |||||||| ||| |||||||||||||||| ||||||    
T  37971435 atcacattatttgtaggcattttgccgttgtatgctattaacttgggtgttgtgagtttgttcgcagattcaccctttacattttta 37971521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 10377841 - 10377889
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgggtg 49  Q
    |||||||||||| ||| ||||||||||||||||||||||||||||||||    
T  10377841 atcatattatttgtaggcattttgccgttgtatgctattaacttgggtg 10377889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 43833933 - 43833885
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgggtg 49  Q
    |||||||||||| ||| ||||||||||||||||||||||||||||||||    
T  43833933 atcatattatttgtaggcattttgccgttgtatgctattaacttgggtg 43833885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 3673593 - 3673680
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgg-----gtgagtttattctcagattcaccctttacgtttttag 83  Q
    |||||||||||| ||| |||||||||||||||| ||||||||||||     |||||||| ||  ||| ||||||||||||||||||||    
T  3673593 atcatattatttgtaggcattttgccgttgtatcctattaacttggatgctgtgagtttgtttgcagtttcaccctttacgtttttag 3673680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 7198132 - 7198045
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgggtg-----agtttattctcagattcaccctttacgtttttag 83  Q
    ||||||||||||  ||  |||||| |||||||||||||||| |||||||     ||||||||| ||||||||||||||||||||||||    
T  7198132 atcatattatttgcaggaattttgtcgttgtatgctattaatttgggtgttgtgagtttattcgcagattcaccctttacgtttttag 7198045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 18890636 - 18890549
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgg-----gtgagtttattctcagattcaccctttacgtttttag 83  Q
    |||||||||||| ||| ||||||| |||||||||||||||||||||     |||||||| ||| |||||||||||| | |||||||||    
T  18890636 atcatattatttgtaggcattttgtcgttgtatgctattaacttgggtgctgtgagtttgttcgcagattcaccctatccgtttttag 18890549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 81
Target Start/End: Original strand, 3240549 - 3240617
Alignment:
Q  18 cattttgccgttgtatgctattaacttgg-----gtgagtttattctcagattcaccctttacgttttt 81  Q
    |||||||||||| ||||||||||||||||     |||||||||||| |||||||| |||||||||||||    
T  3240549 cattttgccgttatatgctattaacttggatgttgtgagtttattcgcagattcatcctttacgttttt 3240617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 9637346 - 9637298
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgggtg 49  Q
    |||||||||||| ||| ||||||| ||||||||||||||||||||||||    
T  9637346 atcatattatttttaggcattttgtcgttgtatgctattaacttgggtg 9637298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 20553178 - 20553134
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttg 45  Q
    |||||||||||| ||| ||||||||||||||||||||||||||||    
T  20553178 atcatattatttgtaggcattttgccgttgtatgctattaacttg 20553134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 23230795 - 23230843
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgggtg 49  Q
    |||||||||||| ||| ||||||| ||||||||||||||||||||||||    
T  23230795 atcatattatttgtaggcattttgtcgttgtatgctattaacttgggtg 23230843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 25238530 - 25238486
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttg 45  Q
    |||||||||||||||||||||||||||||||||| ||| ||||||    
T  25238530 atcatattatttatagacattttgccgttgtatgttataaacttg 25238486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 27110402 - 27110354
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgggtg 49  Q
    |||||||||||| ||||||||||  ||||||||||||||||||||||||    
T  27110402 atcatattatttgtagacattttatcgttgtatgctattaacttgggtg 27110354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 7677220 - 7677133
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgggtg-----agtttattctcagattcaccctttacgtttttag 83  Q
    |||||||||||| ||  ||||||||||||||||| ||||||||||||||     | ||| ||| ||||||||| ||||||||||||||    
T  7677220 atcatattatttgtaagcattttgccgttgtatgttattaacttgggtgctgtgactttgttcacagattcactctttacgtttttag 7677133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 42046373 - 42046460
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgg-----gtgagtttattctcagattcaccctttacgtttttag 83  Q
    |||||||||||| ||| ||||||| | | |||||||||||||||||     |||||||| ||| |||||||||||| |||||||||||    
T  42046373 atcatattatttgtaggcattttgacatcgtatgctattaacttgggtgttgtgagtttgttcgcagattcaccctatacgtttttag 42046460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 14916125 - 14916039
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttggg-----tgagtttattctcagattcaccctttacgttttta 82  Q
    |||||||| ||| ||| |||||||| ||||||||||||||||||| |     ||||||| ||| |||||||||| ||||||||||||    
T  14916125 atcatattgtttgtaggcattttgcagttgtatgctattaacttgagtgcattgagttttttcgcagattcaccatttacgttttta 14916039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 1239334 - 1239286
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgggtg 49  Q
    |||||| ||||| ||| ||||||| ||||||||||||||||||||||||    
T  1239334 atcatactatttgtaggcattttgacgttgtatgctattaacttgggtg 1239286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 16247160 - 16247112
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgggtg 49  Q
    ||||||||||||  || |||||||||||||||||||||||||| |||||    
T  16247160 atcatattatttgaaggcattttgccgttgtatgctattaactcgggtg 16247112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 20559681 - 20559637
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttg 45  Q
    |||||||||||| | | ||||||||||||||||||||||||||||    
T  20559681 atcatattatttgtgggcattttgccgttgtatgctattaacttg 20559637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 20571243 - 20571199
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttg 45  Q
    |||||||||||| | | ||||||||||||||||||||||||||||    
T  20571243 atcatattatttgtgggcattttgccgttgtatgctattaacttg 20571199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 24186598 - 24186550
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgggtg 49  Q
    |||||||||||||||| ||||||||||| |||| |||||||||| ||||    
T  24186598 atcatattatttataggcattttgccgtcgtatactattaacttaggtg 24186550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 41060200 - 41060112
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgggtga-----gtttattctcagattcaccctttacgtttttagt 84  Q
    |||||||||||| ||| |||||||  |||||||||||| || ||||||||     |||| ||| |||||||| ||||||||||||||||    
T  41060200 atcatattatttgtagccattttgttgttgtatgctatcaatttgggtgatgtgagtttgttcgcagattcatcctttacgtttttagt 41060112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 28086749 - 28086706
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaactt 44  Q
    |||||||||||| ||| ||||||| |||||||||||||||||||    
T  28086749 atcatattatttgtaggcattttgtcgttgtatgctattaactt 28086706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 29939452 - 29939495
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaactt 44  Q
    |||||||||||| ||| ||||||||||||||||| |||||||||    
T  29939452 atcatattatttgtagtcattttgccgttgtatgatattaactt 29939495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 83
Target Start/End: Original strand, 11725862 - 11725932
Alignment:
Q  18 cattttgccgttgtatgctattaacttgg-----gtgagtttattctcagattcaccctttacgtttttag 83  Q
    |||| ||||||| ||||||||||||||||     |||||||| ||| |||||||| |||||||||||||||    
T  11725862 cattatgccgttatatgctattaacttggatgatgtgagtttgttcacagattcatcctttacgtttttag 11725932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 40619010 - 40618964
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttggg 47  Q
    |||||||||| | ||  ||||||||||||||||||||||||||||||    
T  40619010 atcatattatgtgtatgcattttgccgttgtatgctattaacttggg 40618964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 45445748 - 45445662
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgg-----gtgagtttattctcagattcaccctttacgttttta 82  Q
    |||||||||||| ||| |||||||  ||| ||||||||||||||||     |||||||| ||| || ||||||| ||||||||||||    
T  45445748 atcatattatttgtaggcattttgttgttttatgctattaacttggatgttgtgagtttgttcgcatattcaccttttacgttttta 45445662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 5046905 - 5046954
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgggtga 50  Q
    |||||||||||| ||| ||||||  ||||||||| |||||||||||||||    
T  5046905 atcatattatttgtaggcattttatcgttgtatgttattaacttgggtga 5046954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 23 - 83
Target Start/End: Complemental strand, 9619254 - 9619189
Alignment:
Q  23 tgccgttgtatgctattaacttgg-----gtgagtttattctcagattcaccctttacgtttttag 83  Q
    ||||||| ||||||||||||||||     |||||||| ||| |||||||| |||||||||||||||    
T  9619254 tgccgttatatgctattaacttggatgctgtgagtttgttcgcagattcatcctttacgtttttag 9619189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 31 - 83
Target Start/End: Complemental strand, 24099163 - 24099106
Alignment:
Q  31 tatgctattaacttgg-----gtgagtttattctcagattcaccctttacgtttttag 83  Q
    ||||||||||||||||     |||||||| ||| ||||||||||||||||||||||||    
T  24099163 tatgctattaacttggatgttgtgagtttgttcgcagattcaccctttacgtttttag 24099106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 17427133 - 17427093
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaa 41  Q
    |||||||||||||||| | ||||| ||||||||||||||||    
T  17427133 atcatattatttataggcgttttgtcgttgtatgctattaa 17427093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 17430783 - 17430743
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaa 41  Q
    |||||||||||||||| | ||||| ||||||||||||||||    
T  17430783 atcatattatttataggcgttttgtcgttgtatgctattaa 17430743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 83
Target Start/End: Original strand, 21237991 - 21238027
Alignment:
Q  47 gtgagtttattctcagattcaccctttacgtttttag 83  Q
    |||||||| ||| ||||||||||||||||||||||||    
T  21237991 gtgagtttgttcacagattcaccctttacgtttttag 21238027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 27498303 - 27498255
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgggtg 49  Q
    |||||||||||||||||||||||| | || |||| ||| ||||||||||    
T  27498303 atcatattatttatagacattttgtctttatatgttatgaacttgggtg 27498255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 52; Significance: 6e-21; HSPs: 33)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 34945542 - 34945629
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgg-----gtgagtttattctcagattcaccctttacgtttttag 83  Q
    |||||||||||||||| ||||||| |||||||||||||||||||||     |||||||| ||| ||||||||||||||||||||||||    
T  34945542 atcatattatttataggcattttgtcgttgtatgctattaacttgggtgttgtgagtttgttcgcagattcaccctttacgtttttag 34945629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 9113664 - 9113577
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttggg-----tgagtttattctcagattcaccctttacgtttttag 83  Q
    |||||||||||| ||| |||||| |||||||||||||||||||||||     ||||||| ||| ||||||||||||||||||||||||    
T  9113664 atcatattatttgtaggcatttttccgttgtatgctattaacttgggtgttctgagtttgttcgcagattcaccctttacgtttttag 9113577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 13007378 - 13007465
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgggtg-----agtttattctcagattcaccctttacgtttttag 83  Q
    |||||||||||| ||| ||||||||||||||||||||||||||||||||     ||||| ||  ||||||||||||||||||||||||    
T  13007378 atcatattatttgtaggcattttgccgttgtatgctattaacttgggtgctgtgagtttgtttgcagattcaccctttacgtttttag 13007465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 24229723 - 24229636
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgg-----gtgagtttattctcagattcaccctttacgtttttag 83  Q
    |||||||||||| ||| |||||||||||||||||||||||||||||     |||||||| ||| ||||||||| ||||||||||||||    
T  24229723 atcatattatttgtaggcattttgccgttgtatgctattaacttgggtgctgtgagtttgttcgcagattcactctttacgtttttag 24229636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 26825579 - 26825666
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgggtg-----agtttattctcagattcaccctttacgtttttag 83  Q
    |||||||||||| ||| ||||||||||||||||||||||||||||||||     ||||| |||  |||||||||||||||||||||||    
T  26825579 atcatattatttgtaggcattttgccgttgtatgctattaacttgggtgctgtgagtttgttcgtagattcaccctttacgtttttag 26825666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 28540845 - 28540758
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgg-----gtgagtttattctcagattcaccctttacgtttttag 83  Q
    |||||||||||| |||||||||| ||||||||||||||||||||||     |||||||| ||| |||||||||||| |||||||||||    
T  28540845 atcatattatttgtagacatttttccgttgtatgctattaacttgggtgctgtgagtttgttcgcagattcaccctatacgtttttag 28540758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 38597946 - 38598033
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgg-----gtgagtttattctcagattcaccctttacgtttttag 83  Q
    |||||||||||| ||| |||||||||||||||||||||||||||||     |||||||| ||| || |||||||||||||||||||||    
T  38597946 atcatattatttgtaggcattttgccgttgtatgctattaacttgggtgttgtgagtttgttcgcaaattcaccctttacgtttttag 38598033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 25980306 - 25980393
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgggtga-----gtttattctcagattcaccctttacgtttttag 83  Q
    |||||||||||| ||| |||||||||||| ||||||||||||||||||||     |||| ||  ||||||||||||||||||||||||    
T  25980306 atcatattatttgtaggcattttgccgttatatgctattaacttgggtgatgtgagtttgtttgcagattcaccctttacgtttttag 25980393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 2979245 - 2979158
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgg-----gtgagtttattctcagattcaccctttacgtttttag 83  Q
    |||||||||||| ||| |||| ||||||||||||||||||||||||     |||||||| ||| |||||||||||| ||| |||||||    
T  2979245 atcatattatttgtaggcattgtgccgttgtatgctattaacttggatgttgtgagtttgttcgcagattcaccctatacatttttag 2979158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 14211376 - 14211463
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgg-----gtgagtttattctcagattcaccctttacgtttttag 83  Q
    |||||||||||| ||| |||||| | ||||||||||||||||||||     |||||||| ||| |||||||||||| |||||||||||    
T  14211376 atcatattatttgtaggcatttttctgttgtatgctattaacttgggtgttgtgagtttgttcgcagattcaccctatacgtttttag 14211463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 19103406 - 19103319
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttggg-----tgagtttattctcagattcaccctttacgtttttag 83  Q
    |||||||||||||||| |||||| |||||||||||||||||||| ||     ||||||| ||| |||||||| ||| |||||||||||    
T  19103406 atcatattatttataggcatttttccgttgtatgctattaactttggtgctatgagtttgttcgcagattcatcctatacgtttttag 19103319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 6012077 - 6011991
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgg-----gtgagtttattctcagattcaccctttacgttttta 82  Q
    |||||||||||| ||| |||| | ||||| ||||||||||||||||     |||||||| ||| |||||||||||||||||||||||    
T  6012077 atcatattatttgtaggcattctaccgttttatgctattaacttgggtgatgtgagtttgttcgcagattcaccctttacgttttta 6011991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 15571635 - 15571684
Alignment:
Q  1 atcatattatttatagacattttgcc-gttgtatgctattaacttgggtg 49  Q
    ||||||||||||||||||||||| || |||||||||||||||||||||||    
T  15571635 atcatattatttatagacatttttccagttgtatgctattaacttgggtg 15571684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 8088151 - 8088103
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgggtg 49  Q
    |||||||||||| ||| ||||||||| ||||||||||||||||||||||    
T  8088151 atcatattatttgtaggcattttgcctttgtatgctattaacttgggtg 8088103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 14726400 - 14726312
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgg-----gtgagtttattctcagattcaccctttacgtttttagt 84  Q
    |||||||||||| ||| ||||||| |||| |||  |||||||||||     |||||||| ||| |||||||||||||||||||||||||    
T  14726400 atcatattatttgtaggcattttgtcgttttataatattaacttggatgctgtgagtttgttcacagattcaccctttacgtttttagt 14726312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 41630651 - 41630699
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgggtg 49  Q
    |||||||||||| ||||||||||| ||||||||||||||||||| ||||    
T  41630651 atcatattatttgtagacattttgtcgttgtatgctattaacttaggtg 41630699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 8096437 - 8096350
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgg-----gtgagtttattctcagattcaccctttacgtttttag 83  Q
    |||||||||||| ||| ||||||||| || ||||||||||||||||     |||||||| ||| || ||||||||||||| |||||||    
T  8096437 atcatattatttgtaggcattttgccattttatgctattaacttgggtggtgtgagtttgttcgcaaattcaccctttacatttttag 8096350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 14082335 - 14082248
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgg-----gtgagtttattctcagattcaccctttacgtttttag 83  Q
    |||||||||||| ||| ||||||| ||||||||||||||||||| |     | |||||| ||| ||||||||||||||| ||||||||    
T  14082335 atcatattatttgtaggcattttgtcgttgtatgctattaacttcgatgatgggagtttgttcgcagattcaccctttatgtttttag 14082248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 35850948 - 35851033
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttggg---tgagtttattctcagattcaccctttacgtttttag 83  Q
    ||||||||||||  || || ||||||||| |||||||||||||||||   ||||||| ||| || ||||||| |||||||||||||    
T  35850948 atcatattatttgcaggcactttgccgttttatgctattaacttgggtgctgagtttgttcacaaattcaccttttacgtttttag 35851033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 45
Target Start/End: Complemental strand, 31078355 - 31078314
Alignment:
Q  4 atattatttatagacattttgccgttgtatgctattaacttg 45  Q
    ||||||||||||||||||||| | ||||||||||||||||||    
T  31078355 atattatttatagacattttgtcattgtatgctattaacttg 31078314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 32691109 - 32691146
Alignment:
Q  4 atattatttatagacattttgccgttgtatgctattaa 41  Q
    |||||||||||||||||||||||||||||| |||||||    
T  32691109 atattatttatagacattttgccgttgtatactattaa 32691146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 19121061 - 19121145
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgg-----gtgagtttattctcagattcaccctttacgtttt 80  Q
    |||||||||||| ||||| ||||||  ||||||| |||||| ||||     |||||||| ||| |||||||||||||||||||||    
T  19121061 atcatattatttgtagacgttttgctcttgtatgatattaatttggatgatgtgagtttgttcgcagattcaccctttacgtttt 19121145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 37986052 - 37986008
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttg 45  Q
    |||| ||||||| ||||||||||| ||||||||||||||||||||    
T  37986052 atcacattatttgtagacattttgtcgttgtatgctattaacttg 37986008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 39567419 - 39567507
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgggtg-----agtttattctcagattcaccctttacgtttttagt 84  Q
    |||||||||||| ||||||||||| ||||||||| ||||| ||||||||     ||||| |||  ||||||||| | ||||||||||||    
T  39567419 atcatattatttgtagacattttgtcgttgtatgttattaccttgggtgttgtgagtttgttcgtagattcaccatatacgtttttagt 39567507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 10332486 - 10332399
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgg-----gtgagtttattctcagattcaccctttacgtttttag 83  Q
    |||||||| ||| ||| ||||||| | || ||||||||||||||||     |||||||| ||| |||||||| |||||||||||||||    
T  10332486 atcatattttttgtaggcattttgtctttatatgctattaacttgggtgatgtgagtttgttcacagattcatcctttacgtttttag 10332399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 11976874 - 11976787
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgg-----gtgagtttattctcagattcaccctttacgtttttag 83  Q
    |||||||||||| ||| |||||| ||||| |||| |||||||||||     |||||||| ||| |||||||| ||||||| |||||||    
T  11976874 atcatattatttgtaggcattttcccgttttatgttattaacttggatgttgtgagtttgttcgcagattcatcctttacatttttag 11976787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 13422082 - 13422169
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgg-----gtgagtttattctcagattcaccctttacgtttttag 83  Q
    |||||||||| | ||| |||||| ||||| ||||||||||||||||     |||||||| ||| || ||||| |||||||||||||||    
T  13422082 atcatattatatgtaggcatttttccgttttatgctattaacttggatgttgtgagtttgttcgcatattcatcctttacgtttttag 13422169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 38007507 - 38007593
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgggtg-----agtttattctcagattcaccctttacgtttttag 83  Q
    |||||||||||| ||| ||||||||| || |||||||||||||||||||     ||||| ||| || ||||||| |||||||||||||    
T  38007507 atcatattatttgtaggcattttgccttt-tatgctattaacttgggtgctgtgagtttgttcacatattcaccttttacgtttttag 38007593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 83
Target Start/End: Original strand, 781561 - 781635
Alignment:
Q  14 tagacattttgccgttgtatgctattaacttgg-----gtgagtttattctcagattcaccctttacgtttttag 83  Q
    |||||||| ||||||| ||||||||||||||||     |||||| ||||| |||||||| |||| ||||||||||    
T  781561 tagacattatgccgttatatgctattaacttggatgttgtgagtatattcgcagattcatccttcacgtttttag 781635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 83
Target Start/End: Original strand, 7241961 - 7242031
Alignment:
Q  18 cattttgccgttgtatgctattaacttgg-----gtgagtttattctcagattcaccctttacgtttttag 83  Q
    |||| ||||||| ||||||||||||||||     |||||||| ||| |||||||| |||||||||||||||    
T  7241961 cattatgccgttatatgctattaacttggatgctgtgagtttgttcgcagattcatcctttacgtttttag 7242031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 83
Target Start/End: Original strand, 7247136 - 7247206
Alignment:
Q  18 cattttgccgttgtatgctattaacttgg-----gtgagtttattctcagattcaccctttacgtttttag 83  Q
    |||| ||||||| ||||||||||||||||     |||||||| ||| |||||||| |||||||||||||||    
T  7247136 cattatgccgttatatgctattaacttggatgctgtgagtttgttcgcagattcatcctttacgtttttag 7247206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 26878047 - 26877962
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgg-----gtgagtttattctcagattcaccctttacgttttta 82  Q
    |||||||||||| ||| || |||| |||||||| ||||||||||||     |||||||| ||| |||||||| ||||||||||||||    
T  26878047 atcatattatttgtaggcactttgtcgttgtat-ctattaacttggatgttgtgagtttgttcgcagattcatcctttacgttttta 26877962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 41184342 - 41184272
Alignment:
Q  18 cattttgccgttgtatgctattaacttgg-----gtgagtttattctcagattcaccctttacgtttttag 83  Q
    |||| ||||||| ||||||||||||||||     |||||||| ||| |||||||| |||||||||||||||    
T  41184342 cattatgccgttatatgctattaacttggatgctgtgagtttgttcgcagattcatcctttacgtttttag 41184272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 52; Significance: 6e-21; HSPs: 47)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 3309105 - 3309192
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgg-----gtgagtttattctcagattcaccctttacgtttttag 83  Q
    |||||||||||| ||| |||||||||||||||||||||||||||||     |||||||||||| |||||||||||| |||||||||||    
T  3309105 atcatattatttgtagtcattttgccgttgtatgctattaacttgggtgctgtgagtttattcgcagattcaccctatacgtttttag 3309192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 4100496 - 4100582
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgg----gtgagtttattctcagattcaccctttacgtttttag 83  Q
    |||||||||||| ||| ||||||||||||||||| |||||||||||    |||||||| ||| ||||||||||||||||||||||||    
T  4100496 atcatattatttgtaggcattttgccgttgtatgatattaacttggtgttgtgagtttgttcgcagattcaccctttacgtttttag 4100582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 3 - 83
Target Start/End: Original strand, 31788618 - 31788703
Alignment:
Q  3 catattatttatagacattttgccgttgtatgctattaacttgg-----gtgagtttattctcagattcaccctttacgtttttag 83  Q
    |||||||||| ||| |||||||||||||||||||||||||||||     |||||||| ||| ||||||||||||||||||||||||    
T  31788618 catattatttgtaggcattttgccgttgtatgctattaacttggatgctgtgagtttgttcgcagattcaccctttacgtttttag 31788703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 7646638 - 7646725
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgg-----gtgagtttattctcagattcaccctttacgtttttag 83  Q
    |||||||||||| ||| |||||||||||||||||||||||||||||     |||||||| ||| |||||||||| |||||||||||||    
T  7646638 atcatattatttgtaggcattttgccgttgtatgctattaacttgggtgttgtgagtttgttcgcagattcaccttttacgtttttag 7646725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 17249087 - 17249000
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgg-----gtgagtttattctcagattcaccctttacgtttttag 83  Q
    |||||||||||| |||||||||||||||||||||||||||||||||     |||||||| ||| |||||||| | |||||||||||||    
T  17249087 atcatattatttgtagacattttgccgttgtatgctattaacttgggtgctgtgagtttgttcgcagattcatcatttacgtttttag 17249000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 18763628 - 18763715
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgg-----gtgagtttattctcagattcaccctttacgtttttag 83  Q
    |||||||||||| ||| |||||||||||| ||||||||||||||||     |||||||| ||| ||||||||||||||||||||||||    
T  18763628 atcatattatttgtaggcattttgccgttttatgctattaacttgggtgttgtgagtttgttcgcagattcaccctttacgtttttag 18763715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 9169198 - 9169109
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgg-----gtgagtttattctcagattc-accctttacgtttttagt 84  Q
    |||||||||||| ||| |||||||||||||||||||||||||||||     |||||||| ||| ||||||| ||||||||||||||||||    
T  9169198 atcatattatttgtaggcattttgccgttgtatgctattaacttggatgctgtgagtttgttcacagattcaaccctttacgtttttagt 9169109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 4778913 - 4779000
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgg-----gtgagtttattctcagattcaccctttacgtttttag 83  Q
    |||||||||||| ||| ||||||||||||||||| |||||| ||||     |||||||| ||| ||||||||||||||||||||||||    
T  4778913 atcatattatttgtaggcattttgccgttgtatgttattaatttgggtgctgtgagtttgttcgcagattcaccctttacgtttttag 4779000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 4904085 - 4903998
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgg-----gtgagtttattctcagattcaccctttacgtttttag 83  Q
    |||||||||||| ||||||||||| |||||||||||||||||||||     |||||||| |||  ||||||| |||||||||||||||    
T  4904085 atcatattatttgtagacattttgtcgttgtatgctattaacttggatgttgtgagtttgttcgtagattcagcctttacgtttttag 4903998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 10237156 - 10237069
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgg-----gtgagtttattctcagattcaccctttacgtttttag 83  Q
    |||||||||||| ||| ||||||| |||||||||||||||||||||     |||||||| ||| |||||||||||| |||||||||||    
T  10237156 atcatattatttgtaggcattttgtcgttgtatgctattaacttgggtgttgtgagtttgttcgcagattcaccctatacgtttttag 10237069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 36692034 - 36692121
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgg-----gtgagtttattctcagattcaccctttacgtttttag 83  Q
    |||||||||||| ||| |||||||||||| ||||||||||||||||     |||||||| ||| ||||||||||||||||||| ||||    
T  36692034 atcatattatttgtaggcattttgccgttttatgctattaacttggttgttgtgagtttgttcacagattcaccctttacgttcttag 36692121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 12554121 - 12554036
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgg-----gtgagtttattctcagattcaccctttacgttttt 81  Q
    |||||||||||| ||| ||||||| ||||||||| |||||||||||     |||||||| ||| ||||||||||||||||||||||    
T  12554121 atcatattatttgtaggcattttgtcgttgtatgatattaacttgggtgttgtgagtttgttcgcagattcaccctttacgttttt 12554036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 7677813 - 7677765
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgggtg 49  Q
    |||||||||||| ||| ||||||||||||||||||||||||||||||||    
T  7677813 atcatattatttttaggcattttgccgttgtatgctattaacttgggtg 7677765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 9 - 83
Target Start/End: Complemental strand, 19062279 - 19062200
Alignment:
Q  9 atttatagacattttgccgttgtatgctattaacttgggtga-----gtttattctcagattcaccctttacgtttttag 83  Q
    |||| ||| |||||||||||||||||||||||||||||||||     ||||  || ||||||||||||||||||||||||    
T  19062279 atttgtaggcattttgccgttgtatgctattaacttgggtgatgtgagtttgctcgcagattcaccctttacgtttttag 19062200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 27097347 - 27097260
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgggtg-----agtttattctcagattcaccctttacgtttttag 83  Q
    |||||||||||| |||  ||||||||||||||| |||||||||||||||     ||||| ||  ||||||||||||||||||||||||    
T  27097347 atcatattatttgtaggaattttgccgttgtatactattaacttgggtgttgtgagtttgtttgcagattcaccctttacgtttttag 27097260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 37876546 - 37876459
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgggt-----gagtttattctcagattcaccctttacgtttttag 83  Q
    |||||||||||| ||| ||||||||||| |||||||||||||||||||     |||||| ||| |||||||||| |||| ||||||||    
T  37876546 atcatattatttgtaggcattttgccgtcgtatgctattaacttgggtgatgcgagtttgttcgcagattcaccatttatgtttttag 37876459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 43397058 - 43396972
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgggtg-----agtttattctcagattcaccctttacgtttttag 83  Q
    |||||||||||| ||  |||||||||||| |||||||||||||||||||     ||||| ||| ||||||||||||||||||||||||    
T  43397058 atcatattatttgtacgcattttgccgttttatgctattaacttgggtgttgttagtttgttc-cagattcaccctttacgtttttag 43396972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 20 - 85
Target Start/End: Original strand, 280977 - 281047
Alignment:
Q  20 ttttgccgttgtatgctattaacttgg-----gtgagtttattctcagattcaccctttacgtttttagtt 85  Q
    |||||||||||||||||||||||||||     |||||||| ||| ||||||||||||||||||||| ||||    
T  280977 ttttgccgttgtatgctattaacttgggtgctgtgagtttgttcgcagattcaccctttacgttttcagtt 281047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 4041534 - 4041448
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgg-----gtgagtttattctcagattcaccctttacgttttta 82  Q
    |||||||||||| ||| |||||||| |||| ||||||||||||| |     |||||||| ||| |||||||||||||||||||||||    
T  4041534 atcatattatttgtagccattttgctgttgcatgctattaacttaggtgttgtgagtttgttcgcagattcaccctttacgttttta 4041448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 33585675 - 33585589
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgg-----gtgagtttattctcagattcaccctttacgttttta 82  Q
    |||||||||||| ||  |||||||||||||||||||||||||||||     |||||||| ||| || ||||| ||||||||||||||    
T  33585675 atcatattatttgtatgcattttgccgttgtatgctattaacttgggtgttgtgagtttgttcgcatattcatcctttacgttttta 33585589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 32448556 - 32448511
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgg 46  Q
    |||||||||||| ||| |||||||||||||||||||||||||||||    
T  32448556 atcatattatttgtaggcattttgccgttgtatgctattaacttgg 32448511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 1421836 - 1421923
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgggtg-----agtttattctcagattcaccctttacgtttttagt 84  Q
    |||||||||||| ||| ||||||| ||||||||||||||||||||||||     ||||| ||  |||||||||| ||||||||||||||    
T  1421836 atcatattatttgtaggcattttgtcgttgtatgctattaacttgggtgttgtgagtttgtttgcagattcacc-tttacgtttttagt 1421923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 19597999 - 19598043
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttg 45  Q
    |||||||||||| |||||||||| |||||||||||||||||||||    
T  19597999 atcatattatttgtagacattttaccgttgtatgctattaacttg 19598043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 8 - 83
Target Start/End: Original strand, 35220495 - 35220575
Alignment:
Q  8 tatttatagacattttgccgttgtatgctattaacttgg-----gtgagtttattctcagattcaccctttacgtttttag 83  Q
    ||||| ||| ||||||| |||||||||||||||||||||     |||||||| ||| || |||||||||||||||||||||    
T  35220495 tatttgtaggcattttgtcgttgtatgctattaacttgggtgctgtgagtttgttcgcatattcaccctttacgtttttag 35220575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 37416870 - 37416918
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgggtg 49  Q
    |||||||||||| ||||||||||||||||||||| | ||||||||||||    
T  37416870 atcatattatttgtagacattttgccgttgtatgttgttaacttgggtg 37416918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 12677390 - 12677304
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgggt-----gagtttattctcagattcaccctttacgtttttag 83  Q
    |||||||||||  ||| |||||| ||||| ||||||||||||||||||     |||||||||| ||||||||||||||| ||||||||    
T  12677390 atcatattattg-taggcatttttccgttttatgctattaacttgggtattatgagtttattcgcagattcaccctttatgtttttag 12677304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 29279510 - 29279423
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaact-tgg----gtgagtttattctcagattcaccctttacgtttttag 83  Q
    |||||||||||| ||| |||||||||||| ||||||||||||| |||    |||||||| ||| || ||||||| |||||||||||||    
T  29279510 atcatattatttgtaggcattttgccgttttatgctattaactatggtgttgtgagtttgttcgcatattcaccatttacgtttttag 29279423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 38445326 - 38445412
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgg-----gtgagtttattctcagattcaccctttacgttttta 82  Q
    |||||||||||| ||| ||||||||| ||||||| ||||||||| |     |||||||| ||| |||||||| ||||||||||||||    
T  38445326 atcatattatttgtaggcattttgccattgtatgttattaactttggtgctgtgagtttgttcgcagattcatcctttacgttttta 38445412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 50
Target Start/End: Complemental strand, 25509004 - 25508959
Alignment:
Q  5 tattatttatagacattttgccgttgtatgctattaacttgggtga 50  Q
    |||||||| ||| ||||||||||||||||| |||||||||||||||    
T  25509004 tattatttgtaggcattttgccgttgtatgttattaacttgggtga 25508959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 37994444 - 37994492
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgggtg 49  Q
    |||||||||||| ||| |||||||| ||| |||||||||||||||||||    
T  37994444 atcatattatttgtaggcattttgctgttatatgctattaacttgggtg 37994492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 5427809 - 5427722
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgggtg-----agtttattctcagattcaccctttacgtttttag 83  Q
    ||||||||||||  |  ||||||  ||||||||||||||||||||||||     ||||| ||| ||||||||||||||||| ||||||    
T  5427809 atcatattatttgcaagcattttatcgttgtatgctattaacttgggtgctgtgagtttgttcgcagattcaccctttacgcttttag 5427722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 14 - 84
Target Start/End: Original strand, 8809452 - 8809527
Alignment:
Q  14 tagacattttgccgttgtatgctattaacttgg-----gtgagtttattctcagattcaccctttacgtttttagt 84  Q
    ||||||||||| |||||||||||||||||||||     |||||||| ||| ||||| || | ||||||||||||||    
T  8809452 tagacattttgtcgttgtatgctattaacttggatgttgtgagtttgttcgcagatccatcttttacgtttttagt 8809527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 10929825 - 10929912
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgg-----gtgagtttattctcagattcaccctttacgtttttag 83  Q
    |||||||||||||||| |||||||  |||| |||||||||||||||     |||||||| ||  || |||||||||||| ||||||||    
T  10929825 atcatattatttataggcattttgttgttgaatgctattaacttggatgctgtgagtttgtttgcatattcaccctttatgtttttag 10929912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 23933559 - 23933512
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgggt 48  Q
    |||||||||||| |||  |||||||||||||| |||||||||||||||    
T  23933559 atcatattatttgtaggaattttgccgttgtaagctattaacttgggt 23933512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 84083 - 84013
Alignment:
Q  18 cattttgccgttgtatgctattaacttgg-----gtgagtttattctcagattcaccctttacgtttttag 83  Q
    |||| ||||||| ||||||||||||||||     |||||||| ||| |||||||| |||||||||||||||    
T  84083 cattatgccgttatatgctattaacttggatgctgtgagtttgttcgcagattcatcctttacgtttttag 84013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 83
Target Start/End: Original strand, 8806045 - 8806115
Alignment:
Q  18 cattttgccgttgtatgctattaacttgg-----gtgagtttattctcagattcaccctttacgtttttag 83  Q
    |||||||||||| ||||||||||||||||     ||||| || ||| |||||||| |||||||||||||||    
T  8806045 cattttgccgttatatgctattaacttggatgttgtgagattgttcgcagattcatcctttacgtttttag 8806115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 27249053 - 27248983
Alignment:
Q  18 cattttgccgttgtatgctattaacttgg-----gtgagtttattctcagattcaccctttacgtttttag 83  Q
    |||| ||||||| ||||||||||||||||     |||||||| ||| |||||||| |||||||||||||||    
T  27249053 cattatgccgttatatgctattaacttggatgttgtgagtttgttcgcagattcatcctttacgtttttag 27248983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 83
Target Start/End: Original strand, 27949597 - 27949675
Alignment:
Q  10 tttatagacattttgccgttgtatgctattaacttgg-----gtgagtttattctcagattcaccctttacgtttttag 83  Q
    |||||||||||| || |||||||||||||||||||||     |||||||| |||  ||||||| | |||||||||||||    
T  27949597 tttatagacattatgacgttgtatgctattaacttggatgttgtgagtttgttcggagattcatcatttacgtttttag 27949675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 28533894 - 28533808
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttg-----ggtgagtttattctcagattcaccctttacgttttta 82  Q
    |||||||||||| |||  |||||| ||||||||||||||||||||      |||||||| ||| ||||| |||| ||||||||||||    
T  28533894 atcatattatttgtaggtattttgtcgttgtatgctattaacttgagtgttgtgagtttgttcgcagatccaccttttacgttttta 28533808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 40659834 - 40659764
Alignment:
Q  18 cattttgccgttgtatgctattaacttgg-----gtgagtttattctcagattcaccctttacgtttttag 83  Q
    |||| ||||||| ||||||||||||||||     |||||||| ||| |||||||| |||||||||||||||    
T  40659834 cattatgccgttatatgctattaacttggatgttgtgagtttgttcgcagattcatcctttacgtttttag 40659764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 7604336 - 7604381
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgg 46  Q
    ||||||||||| |||||||||||  | |||||||||||||||||||    
T  7604336 atcatattattcatagacattttatcattgtatgctattaacttgg 7604381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 11985173 - 11985128
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgg 46  Q
    |||||||||||| ||| |||||||| ||||||| ||||||||||||    
T  11985173 atcatattatttgtaggcattttgctgttgtatcctattaacttgg 11985128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 41327899 - 41327948
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgggtga 50  Q
    |||||||||||| ||| ||||||| | ||||||||||||||||| |||||    
T  41327899 atcatattatttgtaggcattttggcattgtatgctattaacttaggtga 41327948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 41694781 - 41694867
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgggtg----agtttattctcagattcaccctttacgtttttag 83  Q
    |||||||||||||||| ||||||| |||| |||| ||||||||| ||||    ||||| ||| || ||||| | |||||||||||||    
T  41694781 atcatattatttataggcattttgtcgttatatgttattaactttggtgtttaagtttgttcacaaattcatcatttacgtttttag 41694867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 6358821 - 6358773
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgggtg 49  Q
    |||||||||||| ||   |||||| ||||||||||||||||||||||||    
T  6358821 atcatattatttgtacgtattttgtcgttgtatgctattaacttgggtg 6358773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 33760133 - 33760089
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttg 45  Q
    |||||||||||| ||| |||||||| |||||| ||||||||||||    
T  33760133 atcatattatttgtaggcattttgctgttgtaagctattaacttg 33760089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 34335620 - 34335576
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttg 45  Q
    ||||||||||||||| | ||||||  |||||||||||||||||||    
T  34335620 atcatattatttatatatattttgttgttgtatgctattaacttg 34335576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 51; Significance: 3e-20; HSPs: 44)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 19853451 - 19853365
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgg-----gtgagtttattctcagattcaccctttacgttttta 82  Q
    |||||||||||| ||| |||||||||||||||||||||||||||||     |||||||| ||| |||||||||||||||||||||||    
T  19853451 atcatattatttctaggcattttgccgttgtatgctattaacttgggtgttgtgagtttgttcgcagattcaccctttacgttttta 19853365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 5 - 83
Target Start/End: Original strand, 2520953 - 2521036
Alignment:
Q  5 tattatttatagacattttgccgttgtatgctattaacttgg-----gtgagtttattctcagattcaccctttacgtttttag 83  Q
    |||||||| ||| |||||||||||||||||||||||||||||     |||||||| ||| ||||||||||||||||||||||||    
T  2520953 tattatttgtaggcattttgccgttgtatgctattaacttgggtgttgtgagtttgttcgcagattcaccctttacgtttttag 2521036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 48257571 - 48257485
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgg-----gtgagtttattctcagattcaccctttacgttttta 82  Q
    |||||||||||| |||  ||||||||||||||||||||||||||||     |||||||| ||| |||||||||||||||||||||||    
T  48257571 atcatattatttgtaggtattttgccgttgtatgctattaacttggattttgtgagtttgttcgcagattcaccctttacgttttta 48257485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 22611353 - 22611440
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgg-----gtgagtttattctcagattcaccctttacgtttttag 83  Q
    |||||||||||| ||| ||||||||||||||||| |||||| ||||     |||||||| ||| ||||||||||||||||||||||||    
T  22611353 atcatattatttgtaggcattttgccgttgtatggtattaaattgggtgctgtgagtttgttcgcagattcaccctttacgtttttag 22611440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 27652113 - 27652200
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttg-----ggtgagtttattctcagattcaccctttacgtttttag 83  Q
    |||||||||||| ||||||||||||||||||||||||||||||||      |||||||| ||| |||||||| ||| |||||||||||    
T  27652113 atcatattatttgtagacattttgccgttgtatgctattaacttgagtgttgtgagtttgttcgcagattcatcctatacgtttttag 27652200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 32766684 - 32766771
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgg-----gtgagtttattctcagattcaccctttacgtttttag 83  Q
    |||||||||||| ||| |||| || |||||||||||||||||||||     |||||||| |||||||||||||||||| |||||||||    
T  32766684 atcatattatttgtaggcattatgtcgttgtatgctattaacttgggtgctgtgagtttgttctcagattcaccctttgcgtttttag 32766771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 47320351 - 47320264
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgg-----gtgagtttattctcagattcaccctttacgtttttag 83  Q
    |||||||||||| ||| |||||||||||||||||||||||||||||     |||||||| ||| ||||||||  ||||||||||||||    
T  47320351 atcatattatttgtaggcattttgccgttgtatgctattaacttgggtgctgtgagtttgttcgcagattcattctttacgtttttag 47320264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 56040585 - 56040498
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgg-----gtgagtttattctcagattcaccctttacgtttttag 83  Q
    |||||||||||| ||| ||||||| |||||||||||||||||||||     ||||||||  || ||||||||||||||||||||||||    
T  56040585 atcatattatttgtaggcattttgtcgttgtatgctattaacttggatgctgtgagtttgctcgcagattcaccctttacgtttttag 56040498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 83
Target Start/End: Complemental strand, 31891223 - 31891139
Alignment:
Q  4 atattatttatagacattttgccgttgtatgctattaacttgg-----gtgagtttattctcagattcaccctttacgtttttag 83  Q
    ||||||||| ||| |||||||||||||||||||||||||||||     |||||||| ||| || ||||||||| |||||||||||    
T  31891223 atattatttgtaggcattttgccgttgtatgctattaacttgggtgttgtgagtttgttcgcaaattcaccctatacgtttttag 31891139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 36194878 - 36194966
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgg-----gtgagtttattctcagattcaccctttacgtttttagt 84  Q
    |||||||||||| ||| |||||||||||||||||||||||||||||     |||||||| ||| |||||||||| | || |||||||||    
T  36194878 atcatattatttgtaggcattttgccgttgtatgctattaacttggatgttgtgagtttgttcgcagattcaccttatatgtttttagt 36194966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 53811198 - 53811284
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgggtg-agt---ttattctcagattcaccctttacgtttttag 83  Q
    |||||||||||| ||| ||||||| ||||||||||||||||||||||||  ||   || ||| ||||||||||||||||||||||||    
T  53811198 atcatattatttgtaggcattttggcgttgtatgctattaacttgggtgttgtgagttgttcgcagattcaccctttacgtttttag 53811284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 35348477 - 35348564
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgggtg-----agtttattctcagattcaccctttacgtttttag 83  Q
    |||||||||||| ||| ||||||||| || |||||||||||||||||||     ||||| ||  ||||||||||||||||||||||||    
T  35348477 atcatattatttgtaggcattttgccattttatgctattaacttgggtgttgtgagtttgtttgcagattcaccctttacgtttttag 35348564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 43510366 - 43510453
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgg-----gtgagtttattctcagattcaccctttacgtttttag 83  Q
    |||||||||||| ||| ||||||| |||||||||  ||||||||||     |||||||| ||| ||||||||||||||||||||||||    
T  43510366 atcatattatttgtaggcattttgtcgttgtatgtcattaacttgggtgctgtgagtttgttcgcagattcaccctttacgtttttag 43510453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 6155162 - 6155072
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgg--------gtgagtttattctcagattcaccctttacgtttttag 83  Q
    |||||||||||| ||| ||||||| |||||||||||||||||||||        |||||||| ||| ||||||||||||||| ||||||||    
T  6155162 atcatattatttgtaggcattttgtcgttgtatgctattaacttgggtgctactgtgagtttgttcgcagattcaccctttatgtttttag 6155072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 24099006 - 24098921
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgg----gtgagtttattctcagattcaccctttacgtttttag 83  Q
    |||||||||||| ||| ||||||||||||| |||||||||||||||    |||||||| ||| ||||| ||| ||||||||||||||    
T  24099006 atcatattatttgtaggcattttgccgttg-atgctattaacttggtgctgtgagtttgttcgcagatccactctttacgtttttag 24098921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 1621448 - 1621363
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgg-----gtgagtttattctcagattcaccctttacgtttttag 83  Q
    |||||||||||| |||||||||  ||||||||||| ||||||||||     |||||||| ||| |||||||||||| |||||||||||    
T  1621448 atcatattatttgtagacattt--ccgttgtatgcaattaacttggatgttgtgagtttgttcgcagattcaccctatacgtttttag 1621363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 7008928 - 7008880
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgggtg 49  Q
    |||||||||||| | ||||||||||||||||||||||||||||| ||||    
T  7008928 atcatattatttgtggacattttgccgttgtatgctattaacttaggtg 7008880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 26633610 - 26633522
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgg-----gtgagtttattctcagattcaccctttacgtttttagt 84  Q
    |||||||||  ||||| |||||| |||||||||||||||| ||| |     |||||||| ||| |||||||||||||||||||||||||    
T  26633610 atcatattaaatataggcattttaccgttgtatgctattagcttagatgttgtgagtttgttcgcagattcaccctttacgtttttagt 26633522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 37030431 - 37030479
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgggtg 49  Q
    |||||||||||| ||||||||| ||| ||||||||||||||||||||||    
T  37030431 atcatattatttgtagacatttagccattgtatgctattaacttgggtg 37030479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 21686181 - 21686098
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgg-----gtgagtttattctcagattcaccctttacgttt 79  Q
    |||||||||||| ||| |||||||||| |||||| |||||||||||     |||||||| ||| || |||||||||||||||||    
T  21686181 atcatattatttgtaggcattttgccgctgtatgttattaacttgggtgctgtgagtttgttcgcatattcaccctttacgttt 21686098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 29960888 - 29960801
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgg-----gtgagtttattctcagattcaccctttacgtttttag 83  Q
    |||||| ||||| ||| ||||||||||||||||||| |||||||||     |||||||| ||| |||||||||| |||| ||||||||    
T  29960888 atcatactatttgtaggcattttgccgttgtatgcttttaacttgggtgctgtgagtttgttcgcagattcaccttttatgtttttag 29960801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 53444288 - 53444375
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgggtg-----agtttattctcagattcaccctttacgtttttag 83  Q
    |||||||||||| |||| ||||| ||||| |||||||||||||||||||     ||||| |||  ||||||||| |||||||||||||    
T  53444288 atcatattatttgtagatatttttccgttttatgctattaacttgggtgctgtgagtttgttcgtagattcaccttttacgtttttag 53444375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 9178523 - 9178609
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttg-----ggtgagtttattctcagattcaccctttacgttttta 82  Q
    |||||||||||| ||| ||||||| ||||||||||||||||||||      |||||||| ||| ||| ||||||||||| |||||||    
T  9178523 atcatattatttgtaggcattttgtcgttgtatgctattaacttgtgtgacgtgagtttgttcgcagtttcaccctttatgttttta 9178609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 10496505 - 10496553
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgggtg 49  Q
    |||||||||||| ||| |||||||| || ||||||||||||||||||||    
T  10496505 atcatattatttgtaggcattttgctgtcgtatgctattaacttgggtg 10496553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 49
Target Start/End: Original strand, 13634289 - 13634333
Alignment:
Q  5 tattatttatagacattttgccgttgtatgctattaacttgggtg 49  Q
    |||||||| |||  |||||||||||||||||||||||||||||||    
T  13634289 tattatttgtagttattttgccgttgtatgctattaacttgggtg 13634333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 37465652 - 37465700
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgggtg 49  Q
    |||||||||||| ||  ||||||| ||||||||||||||||||||||||    
T  37465652 atcatattatttgtaagcattttgtcgttgtatgctattaacttgggtg 37465700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 42032468 - 42032424
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttg 45  Q
    |||||||||||  ||| ||||||||||||||||||||||||||||    
T  42032468 atcatattattggtagccattttgccgttgtatgctattaacttg 42032424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 44596830 - 44596878
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgggtg 49  Q
    |||||||||||| |||  ||||| |||||||||||||||||||||||||    
T  44596830 atcatattatttgtagctattttaccgttgtatgctattaacttgggtg 44596878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 45418682 - 45418730
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgggtg 49  Q
    |||||||||||| ||| ||||||| ||||||||||||||||| ||||||    
T  45418682 atcatattatttgtaggcattttgtcgttgtatgctattaacatgggtg 45418730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 28857571 - 28857658
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgg-----gtgagtttattctcagattcaccctttacgtttttag 83  Q
    |||||||| ||| |||  |||||||| || ||||||||||||||||     |||||||| ||| |||||||| |||||||||||||||    
T  28857571 atcatattttttgtaggtattttgcccttatatgctattaacttggcagctgtgagtttgttcgcagattcatcctttacgtttttag 28857658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 36204318 - 36204231
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgg-----gtgagtttattctcagattcaccctttacgtttttag 83  Q
    |||||||||||| |||| |||||||| || |||| |||||| ||||     |||||||| ||| ||||||||||||||| ||||||||    
T  36204318 atcatattatttgtagatattttgccattatatgttattaatttggatgttgtgagtttgttcacagattcaccctttatgtttttag 36204231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 29120318 - 29120276
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaact 43  Q
    |||||||||||| ||| ||||||| ||||||||||||||||||    
T  29120318 atcatattatttgtaggcattttgtcgttgtatgctattaact 29120276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 36161881 - 36161967
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgg-----gtgagtttattctcagattcaccctttacgttttta 82  Q
    |||||||||||| ||| ||||| | |||| |||| |||||||||||     |||||||| ||| ||||||||| |||||||||||||    
T  36161881 atcatattatttgtaggcatttggtcgttatatgttattaacttgggtgttgtgagtttgttcacagattcactctttacgttttta 36161967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 53616552 - 53616482
Alignment:
Q  18 cattttgccgttgtatgctattaacttgg-----gtgagtttattctcagattcaccctttacgtttttag 83  Q
    |||| ||||||| ||||||||||||||||     |||||||| ||| |||||||| |||||||||||||||    
T  53616552 cattatgccgttatatgctattaacttggatgatgtgagtttgttcgcagattcatcctttacgtttttag 53616482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 83
Target Start/End: Original strand, 56199279 - 56199353
Alignment:
Q  14 tagacattttgccgttgtatgctattaacttgg-----gtgagtttattctcagattcaccctttacgtttttag 83  Q
    |||||||| |||||||  |||||||||||||||     |||||||| ||| |||||||| |||||||||||||||    
T  56199279 tagacattatgccgttacatgctattaacttggatgctgtgagtttgttcgcagattcatcctttacgtttttag 56199353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 11299949 - 11299864
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgg-----gtgagtttattctcagattcaccctttacgttttt 81  Q
    |||||||||||  ||| ||||||| |||| |||| |||||||||||     |||||||| ||| |||||||| |||||||||||||    
T  11299949 atcatattattcgtaggcattttggcgttttatgttattaacttgggtgttgtgagtttgttcgcagattcatcctttacgttttt 11299864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 36184701 - 36184746
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgg 46  Q
    |||||| ||||| ||| ||||||| |||||||||||||||||||||    
T  36184701 atcatactatttctaggcattttgtcgttgtatgctattaacttgg 36184746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 7 - 83
Target Start/End: Complemental strand, 56156575 - 56156494
Alignment:
Q  7 ttatttatagacattttgccgttgtatgctattaacttgg-----gtgagtttattctcagattcaccctttacgtttttag 83  Q
    |||||| ||| |||||||||||| ||||||||| || |||     |||||||| ||| |||||||||| |||||||||||||    
T  56156575 ttatttgtaggcattttgccgttttatgctatttacctgggtgttgtgagtttgttcgcagattcaccttttacgtttttag 56156494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 4142691 - 4142659
Alignment:
Q  1 atcatattatttatagacattttgccgttgtat 33  Q
    |||||||||||| ||||||||||||||||||||    
T  4142691 atcatattatttgtagacattttgccgttgtat 4142659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 21662607 - 21662651
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttg 45  Q
    |||||||||||| |||||| ||||  |||||||||||||||||||    
T  21662607 atcatattatttgtagacactttggtgttgtatgctattaacttg 21662651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 21671371 - 21671415
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttg 45  Q
    |||||||||||| |||||| ||||  |||||||||||||||||||    
T  21671371 atcatattatttgtagacactttggtgttgtatgctattaacttg 21671415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 22305560 - 22305516
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttg 45  Q
    |||||||||||| |||  |||||| ||||||||||||||||||||    
T  22305560 atcatattatttgtaggtattttgtcgttgtatgctattaacttg 22305516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 82
Target Start/End: Original strand, 29966522 - 29966582
Alignment:
Q  27 gttgtatgctattaacttgg-----gtgagtttattctcagattcaccctttacgttttta 82  Q
    ||||||||||||||||||||     |||||||| ||| |||||||| ||||||||||||||    
T  29966522 gttgtatgctattaacttggatgttgtgagtttgttcgcagattcatcctttacgttttta 29966582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 83
Target Start/End: Complemental strand, 52097784 - 52097748
Alignment:
Q  47 gtgagtttattctcagattcaccctttacgtttttag 83  Q
    |||||||||||| || |||||||||||||||||||||    
T  52097784 gtgagtttattcgcatattcaccctttacgtttttag 52097748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 48; Significance: 2e-18; HSPs: 48)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 36775649 - 36775562
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgg-----gtgagtttattctcagattcaccctttacgtttttag 83  Q
    |||||||||||| ||| |||||||||||||||||||||||||||||     |||||||| ||| |||||||||||| |||||||||||    
T  36775649 atcatattatttgtaggcattttgccgttgtatgctattaacttggatgttgtgagtttgttcgcagattcaccctatacgtttttag 36775562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 29738603 - 29738515
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgggtg-----agtttattctcagattcaccctttacgtttttagt 84  Q
    |||||||||||||| | ||||| ||||||||||||||||||||||||||     ||||  ||| |||||||||||||||||||||||||    
T  29738603 atcatattatttattggcatttggccgttgtatgctattaacttgggtgctgtgagttcgttcgcagattcaccctttacgtttttagt 29738515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 24583103 - 24583190
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgg-----gtgagtttattctcagattcaccctttacgtttttag 83  Q
    |||||||||||| ||| ||||||||||||||||| |||||||||||     |||||||| ||| |||||||| |||||||||||||||    
T  24583103 atcatattatttgtaggcattttgccgttgtatgatattaacttgggtgatgtgagtttgttcacagattcatcctttacgtttttag 24583190  T

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Target: chr1; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 24583299 - 24583386
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgg-----gtgagtttattctcagattcaccctttacgtttttag 83  Q
    |||||||||||| ||| |||||||||||||||||||||||||||||     |||||||| ||| |||||||| ||||||| |||||||    
T  24583299 atcatattatttgtaggcattttgccgttgtatgctattaacttgggtgatgtgagtttgttcgcagattcatcctttacatttttag 24583386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 31919142 - 31919229
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgg-----gtgagtttattctcagattcaccctttacgtttttag 83  Q
    |||||||||||| ||||||||||| |||||||||||||||||||||     | |||||| ||| |||||||| |||||||||||||||    
T  31919142 atcatattatttgtagacattttgtcgttgtatgctattaacttggatgttgcgagtttgttcgcagattcatcctttacgtttttag 31919229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 34878217 - 34878130
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgg-----gtgagtttattctcagattcaccctttacgtttttag 83  Q
    |||||||||||| ||| |||||||||||| ||||||||||||||||     |||||||| ||| |||||||||| |||||||||||||    
T  34878217 atcatattatttgtaggcattttgccgttttatgctattaacttgggtgttgtgagtttgttcacagattcaccttttacgtttttag 34878130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 44543425 - 44543512
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgg-----gtgagtttattctcagattcaccctttacgtttttag 83  Q
    |||||||||||| ||| |||||||||||| ||||||||||||||||     |||||||| ||| |||||||| |||||||||||||||    
T  44543425 atcatattatttgtaggcattttgccgttttatgctattaacttgggtgctgtgagtttgttcgcagattcatcctttacgtttttag 44543512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 48750338 - 48750425
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgg-----gtgagtttattctcagattcaccctttacgtttttag 83  Q
    |||||||||||| ||| |||||||||||||||||||||||||||||     |||||||| ||| || ||||||||| |||||||||||    
T  48750338 atcatattatttgtaggcattttgccgttgtatgctattaacttgggtgttgtgagtttgttcgcatattcaccctatacgtttttag 48750425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 49627066 - 49627153
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgg-----gtgagtttattctcagattcaccctttacgtttttag 83  Q
    ||||| |||||| |||||||||||||||||||||||||||| ||||     |||||||| ||| |||||||| |||||||||||||||    
T  49627066 atcatcttatttgtagacattttgccgttgtatgctattaatttgggtgttgtgagtttgttcgcagattcatcctttacgtttttag 49627153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 32395151 - 32395236
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgggtg-----agtttattctcagattcaccctttacgttttta 82  Q
    |||||||||||||||| |||||||||| |||||||||||||||||||||     ||||| ||| | |||||||||||||||||||||    
T  32395151 atcatattatttataggcattttgccgctgtatgctattaacttgggtgctgtaagtttgttcgc-gattcaccctttacgttttta 32395236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 82
Target Start/End: Complemental strand, 49504532 - 49504448
Alignment:
Q  3 catattatttatagacattttgccgttgtatgctattaacttgg-----gtgagtttattctcagattcaccctttacgttttta 82  Q
    |||| ||||| ||| |||||| ||||||||||||||||||||||     |||||||| ||| |||||||||||||||||||||||    
T  49504532 cataatatttttaggcattttaccgttgtatgctattaacttgggtgctgtgagtttgttcgcagattcaccctttacgttttta 49504448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 14872792 - 14872871
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgg-----gtgagtttattctcagattcaccctttac 75  Q
    |||||||||||| ||| |||||||||||||||||||||||||||||     |||||||| ||| || |||||||||||||    
T  14872792 atcatattatttgtaggcattttgccgttgtatgctattaacttggatgctgtgagtttgttcgcatattcaccctttac 14872871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 15431605 - 15431518
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgg-----gtgagtttattctcagattcaccctttacgtttttag 83  Q
    |||||||||||| ||||||||||  |||||||||||||| ||||||     |||||||| ||| |||||||| |||||||||||||||    
T  15431605 atcatattatttgtagacattttatcgttgtatgctattcacttggatgttgtgagtttgttcgcagattcatcctttacgtttttag 15431518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 19596399 - 19596312
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgggt-----gagtttattctcagattcaccctttacgtttttag 83  Q
    |||||||||||| ||| |||||||||||| |||||||||||||||| |     |||||| ||| |||||||||| |||||||||||||    
T  19596399 atcatattatttgtaggcattttgccgttttatgctattaacttggatgctacgagtttgttcgcagattcaccttttacgtttttag 19596312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 34413031 - 34412944
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgg-----gtgagtttattctcagattcaccctttacgtttttag 83  Q
    |||||||||||| ||| |||||||| |||||||| |||||||||||     |||||||| ||| |||||||||||| |||||||||||    
T  34413031 atcatattatttgtaggcattttgcggttgtatgttattaacttgggtgttgtgagtttgttcgcagattcaccctatacgtttttag 34412944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 35484330 - 35484243
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgg-----gtgagtttattctcagattcaccctttacgtttttag 83  Q
    |||||||||||| ||  |||||||||||||||||||||||||||||     |||||||| ||| ||||||| |||||||| |||||||    
T  35484330 atcatattatttgtaagcattttgccgttgtatgctattaacttgggtgttgtgagtttgttcgcagattcgccctttacatttttag 35484243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 5983989 - 5984038
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgggtga 50  Q
    |||||||||||| ||| ||||||| |||||||||||||||||||||||||    
T  5983989 atcatattatttgtaggcattttgtcgttgtatgctattaacttgggtga 5984038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 7836735 - 7836650
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgg-----gtgagtttattctcagattcaccctttacgttttt 81  Q
    |||||||||||| ||| |||||||||||| ||||||||||||||||     |||||||| ||| |||||||| |||||| ||||||    
T  7836735 atcatattatttgtaggcattttgccgttttatgctattaacttgggtgctgtgagtttgttcgcagattcatcctttatgttttt 7836650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 16161981 - 16162066
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgg-----gtgagtttattctcagattcaccctttacgttttt 81  Q
    |||||||||||| ||| ||||||||||| | ||||||||||||| |     |||||||| ||| ||||||||||||||||||||||    
T  16161981 atcatattatttgtaggcattttgccgtggaatgctattaacttaggtgttgtgagtttgttcgcagattcaccctttacgttttt 16162066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 19061062 - 19061107
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgg 46  Q
    |||||||||||| ||| |||||||||||||||||||||||||||||    
T  19061062 atcatattatttgtaggcattttgccgttgtatgctattaacttgg 19061107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 16989524 - 16989612
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgggtg-----agtttattctcagattcaccctttacgtttttagt 84  Q
    |||||||||||| ||| |||||||||||| |||||||||||||||||||     ||||| ||  |||||| ||| ||||||||||||||    
T  16989524 atcatattatttgtaggcattttgccgttttatgctattaacttgggtgctgtgagtttgtttgcagatttaccatttacgtttttagt 16989612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 44915792 - 44915880
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgg-----gtgagtttattctcagattcaccctttacgtttttagt 84  Q
    |||||||||||| ||| |||||||||||||||||||||  ||||||     |||||||| ||| || ||||| ||||||||||||||||    
T  44915792 atcatattatttgtaggcattttgccgttgtatgctatcgacttgggtgatgtgagtttgttcgcatattcatcctttacgtttttagt 44915880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 7337602 - 7337515
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgg-----gtgagtttattctcagattcaccctttacgtttttag 83  Q
    |||||||||||| ||| |||||||| |||| |||||||||||||||     |||||||| ||| |||||||||||||||  |||||||    
T  7337602 atcatattatttgtaggcattttgctgttgcatgctattaacttggctgttgtgagtttgttcgcagattcaccctttatatttttag 7337515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 11462421 - 11462334
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgggtg-----agtttattctcagattcaccctttacgtttttag 83  Q
    |||||||||||| |||  |||||| ||||||||||||||||||||||||     ||||| |||  ||||||||| |||||||||||||    
T  11462421 atcatattatttgtaggaattttgtcgttgtatgctattaacttgggtgctgtgagtttgttcgtagattcaccatttacgtttttag 11462334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 84
Target Start/End: Original strand, 20266477 - 20266552
Alignment:
Q  14 tagacattttgccgttgtatgctattaacttgg-----gtgagtttattctcagattcaccctttacgtttttagt 84  Q
    |||||||| ||||||| ||||| ||||||||||     |||||||||||| |||||||| ||||||||||||||||    
T  20266477 tagacattatgccgttatatgcaattaacttggatgttgtgagtttattcgcagattcatcctttacgtttttagt 20266552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 45415711 - 45415798
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgg-----gtgagtttattctcagattcaccctttacgtttttag 83  Q
    |||||||||||| ||| ||||||||||||||||  |||||| ||||     |||||||| ||| || |||||||||||||||||||||    
T  45415711 atcatattatttgtaggcattttgccgttgtataatattaatttgggtgttgtgagtttgttcgcatattcaccctttacgtttttag 45415798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 47133056 - 47133143
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgg-----gtgagtttattctcagattcaccctttacgtttttag 83  Q
    |||||||| ||| ||| |||||||||||| ||||||||||||||||     |||||||| ||| |||||| | |||||||||||||||    
T  47133056 atcatattttttgtaggcattttgccgttatatgctattaacttggatgttgtgagtttgttcgcagatttatcctttacgtttttag 47133143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 3 - 45
Target Start/End: Original strand, 5856064 - 5856106
Alignment:
Q  3 catattatttatagacattttgccgttgtatgctattaacttg 45  Q
    |||||||||| |||| |||||||||||||||||||||||||||    
T  5856064 catattatttgtagaaattttgccgttgtatgctattaacttg 5856106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 13144751 - 13144665
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgg-----gtgagtttattctcagattcaccctttacgttttta 82  Q
    |||||| ||||| ||| ||||||||| || ||||||||||||||||     |||||||| ||| |||||||||||||||| ||||||    
T  13144751 atcataatatttgtaggcattttgccattttatgctattaacttggatgttgtgagtttgttcgcagattcaccctttacattttta 13144665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 21947557 - 21947471
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgg-----gtgagtttattctcagattcaccctttacgttttta 82  Q
    |||||||||||| ||| ||||||||||||||||  |||||||||||     |||||||| ||| |||||| ||||||||| ||||||    
T  21947557 atcatattatttgtaggcattttgccgttgtattttattaacttgggtgatgtgagtttgttcgcagatttaccctttacattttta 21947471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 31984314 - 31984400
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgggtg-----agtttattctcagattcaccctttacgttttta 82  Q
    |||||||||||| ||  ||||||| ||||||||||||||||||||||||     | ||| ||| |||||| ||||||||||||||||    
T  31984314 atcatattatttttaagcattttgtcgttgtatgctattaacttgggtgttgtgactttgttcgcagatttaccctttacgttttta 31984400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 51373797 - 51373711
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgg-----gtgagtttattctcagattcaccctttacgttttta 82  Q
    |||||||||||| ||| ||||||| ||| |||||||||||||||||     |||||||| ||   ||||||||||||||||||||||    
T  51373797 atcatattatttgtaggcattttgtcgtcgtatgctattaacttgggtgttgtgagtttgtttggagattcaccctttacgttttta 51373711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 3228422 - 3228471
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgggtga 50  Q
    |||||||||||| ||| |||||||||||| |||| |||||||||||||||    
T  3228422 atcatattatttgtaggcattttgccgttatatgttattaacttgggtga 3228471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 47 - 83
Target Start/End: Original strand, 1742491 - 1742527
Alignment:
Q  47 gtgagtttattctcagattcaccctttacgtttttag 83  Q
    |||||||||||| ||||||||||||||||||||||||    
T  1742491 gtgagtttattcacagattcaccctttacgtttttag 1742527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 4413267 - 4413354
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttg-----ggtgagtttattctcagattcaccctttacgtttttag 83  Q
    |||||||||||| ||| |||||||| ||||||||||||||| |||      |||| ||| ||| |||||||| |||||||||||||||    
T  4413267 atcatattatttgtaggcattttgctgttgtatgctattaaattgagtgctgtgaatttgttcacagattcatcctttacgtttttag 4413354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 10776400 - 10776313
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgggtg-----agtttattctcagattcaccctttacgtttttag 83  Q
    ||||| |||||| ||| |||||||| ||||||| |||||||||||||||     ||||| ||| ||  ||||||||||||||||||||    
T  10776400 atcattttatttgtaggcattttgctgttgtattctattaacttgggtgctgtgagtttgttcgcaatttcaccctttacgtttttag 10776313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 14489425 - 14489512
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgggt-----gagtttattctcagattcaccctttacgtttttag 83  Q
    |||||||||||| |||  ||||||  |||||||| |||||||||||||     |||||||||  || |||||||||||||||||||||    
T  14489425 atcatattatttgtaggtattttgttgttgtatgttattaacttgggtattgagagtttattagcatattcaccctttacgtttttag 14489512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 14 - 49
Target Start/End: Original strand, 27456650 - 27456685
Alignment:
Q  14 tagacattttgccgttgtatgctattaacttgggtg 49  Q
    ||||||||||| ||||||||||||||||||||||||    
T  27456650 tagacattttgtcgttgtatgctattaacttgggtg 27456685  T

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Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 83
Target Start/End: Original strand, 5701438 - 5701508
Alignment:
Q  18 cattttgccgttgtatgctattaacttgg-----gtgagtttattctcagattcaccctttacgtttttag 83  Q
    |||| ||||||| ||||||||||||||||     |||||||| ||| |||||||| |||||||||||||||    
T  5701438 cattatgccgttatatgctattaacttggatgttgtgagtttgttcgcagattcatcctttacgtttttag 5701508  T

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Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 19715797 - 19715727
Alignment:
Q  18 cattttgccgttgtatgctattaacttgg-----gtgagtttattctcagattcaccctttacgtttttag 83  Q
    |||| ||| ||| ||||||||||||||||     |||||||||||| |||||||| |||||||||||||||    
T  19715797 cattatgctgttatatgctattaacttggatgctgtgagtttattcgcagattcatcctttacgtttttag 19715727  T

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Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 27580067 - 27579989
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgg-----gtgagtttattctcagattcacccttta 74  Q
    ||||||||||| |||  ||||||||| || ||||||||||||||||     |||||||| ||| |||||||||||||||    
T  27580067 atcatattattcataagcattttgccattttatgctattaacttgggtgttgtgagtttgttcgcagattcacccttta 27579989  T

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Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 31317889 - 31317975
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgg-----gtgagtttattctcagattcaccctttacgttttta 82  Q
    |||||||||||| ||| ||||||  ||||| || ||||||||||||     |||||||| ||| || ||||||||||||||||||||    
T  31317889 atcatattatttgtaggcattttatcgttgcatcctattaacttgggtgatgtgagtttgttcgcaaattcaccctttacgttttta 31317975  T

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Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 50166001 - 50165931
Alignment:
Q  18 cattttgccgttgtatgctattaacttgg-----gtgagtttattctcagattcaccctttacgtttttag 83  Q
    |||| ||||||| ||||||||||||||||     |||||||| ||| |||||||| |||||||||||||||    
T  50166001 cattatgccgttatatgctattaacttggatgttgtgagtttgttcacagattcatcctttacgtttttag 50165931  T

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Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 6217762 - 6217717
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgg 46  Q
    |||||||||||| |||  ||||| ||||||||||||||||||||||    
T  6217762 atcatattatttgtaggtattttaccgttgtatgctattaacttgg 6217717  T

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Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 47 - 84
Target Start/End: Original strand, 19723526 - 19723563
Alignment:
Q  47 gtgagtttattctcagattcaccctttacgtttttagt 84  Q
    |||||||||||| |||||||| ||||||||||||||||    
T  19723526 gtgagtttattcgcagattcatcctttacgtttttagt 19723563  T

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Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 47 - 84
Target Start/End: Complemental strand, 35461942 - 35461905
Alignment:
Q  47 gtgagtttattctcagattcaccctttacgtttttagt 84  Q
    |||||||||||| |||||||||||||||| ||||||||    
T  35461942 gtgagtttattcgcagattcaccctttacatttttagt 35461905  T

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Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 46399123 - 46399168
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgg 46  Q
    ||||||||||||||| ||||||||  |||||||| |||||||||||    
T  46399123 atcatattatttataaacattttgttgttgtatgttattaacttgg 46399168  T

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Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 23291581 - 23291533
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgggtg 49  Q
    ||||||||||||  ||  ||||||||||| |||||||||||||||||||    
T  23291581 atcatattatttggaggtattttgccgttttatgctattaacttgggtg 23291533  T

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Target: scaffold0884 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0884
Description:

Target: scaffold0884; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 1912 - 1825
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttggg-----tgagtttattctcagattcaccctttacgtttttag 83  Q
    |||||||||||| ||| |||||||| |||||||| ||||||||||||     ||||||| ||| ||||||||||||||||||||||||    
T  1912 atcatattatttgtaggcattttgctgttgtatgttattaacttgggtgttatgagtttgttcgcagattcaccctttacgtttttag 1825  T

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Target: scaffold0445 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0445
Description:

Target: scaffold0445; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 1494 - 1581
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgg-----gtgagtttattctcagattcaccctttacgtttttag 83  Q
    |||||||||||| ||| |||||||||||| ||||||||||||||||     |||||||| ||  ||||||||||||||||||||||||    
T  1494 atcatattatttgtaggcattttgccgttttatgctattaacttggatgttgtgagtttgtttgcagattcaccctttacgtttttag 1581  T

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Target: scaffold0026 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 71809 - 71726
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgggtg-----agtttattctcagattcaccctttacgttt 79  Q
    |||||||||||| ||| ||||||||||||||||||||||||||||||||     ||||| |||  |||||||||||||||||||    
T  71809 atcatattatttgtaggcattttgccgttgtatgctattaacttgggtgctgtgagtttgttcggagattcaccctttacgttt 71726  T

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Target: scaffold0088 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 50926 - 51012
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgg-----gtgagtttattctcagattcaccctttacgttttta 82  Q
    |||||||||||| ||| ||||||||| |||||||||||||||||||     |||||||| ||| |||||||||||||||| ||||||    
T  50926 atcatattatttgtaggcattttgccattgtatgctattaacttgggtgctgtgagtttgttcgcagattcaccctttacattttta 51012  T

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Target: scaffold0136 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 9981 - 9894
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgggtg-----agtttattctcagattcaccctttacgtttttag 83  Q
    |||||||||||| ||| |||||| ||||| ||||||||| |||||||||     ||||| ||| ||||||||||||||||||||||||    
T  9981 atcatattatttgtaggcatttttccgttttatgctattgacttgggtgctgtgagtttgttcgcagattcaccctttacgtttttag 9894  T

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Target: scaffold0127 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 15642 - 15729
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgg-----gtgagtttattctcagattcaccctttacgtttttag 83  Q
    |||||||||||| ||| |||||||||||| ||||||||||||||||     |||||||| ||| ||||||||| ||||| ||||||||    
T  15642 atcatattatttgtaggcattttgccgttatatgctattaacttgggtgctgtgagtttgttcgcagattcactctttatgtttttag 15729  T

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Target: scaffold0050 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 65981 - 65895
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttggg-----tgagtttattctcagattcaccctttacgttttta 82  Q
    |||||||||||| ||| ||||||| |||||||||||||||||||| |     ||||||| ||| |||||||||||||||| ||||||    
T  65981 atcatattatttgtaggcattttgtcgttgtatgctattaacttgagtgttatgagtttgttcgcagattcaccctttacattttta 65895  T

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Target: scaffold0017 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 32686 - 32599
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttg-----ggtgagtttattctcagattcaccctttacgtttttag 83  Q
    |||||||||||| ||| ||||||| || ||||| |||||||||||      |||||||| ||| ||||||||||||||||||||||||    
T  32686 atcatattatttgtaggcattttgtcgctgtatactattaacttgagtgttgtgagtttgttcccagattcaccctttacgtttttag 32599  T

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Target: scaffold0009 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 58027 - 57940
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgg-----gtgagtttattctcagattcaccctttacgtttttag 83  Q
    |||||||| ||| ||| |||||||||||| ||||||||||||||||     |||||||| ||| |||||| | |||||||||||||||    
T  58027 atcatattttttgtaggcattttgccgttatatgctattaacttggatgctgtgagtttgttcgcagatttatcctttacgtttttag 57940  T

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Target: scaffold0049 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 4 - 49
Target Start/End: Complemental strand, 71236 - 71191
Alignment:
Q  4 atattatttatagacattttgccgttgtatgctattaacttgggtg 49  Q
    ||||||||| ||| |||||||  |||||||||||||||||||||||    
T  71236 atattatttgtaggcattttgttgttgtatgctattaacttgggtg 71191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 31213 - 31165
Alignment:
Q  1 atcatattatttatagacattttgccgttgtatgctattaacttgggtg 49  Q
    |||||||||||||||| ||||||| |||||  |||||||| ||||||||    
T  31213 atcatattatttataggcattttgtcgttgcttgctattagcttgggtg 31165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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