View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11930_low_130 (Length: 243)
Name: NF11930_low_130
Description: NF11930
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11930_low_130 |
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Alignment Details
Target: chr4 (Bit Score: 219; Significance: 1e-120; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 24261418 - 24261184
Alignment:
| Q |
1 |
tcgattaagtttgattgtggatactcacactaatcttccacttgtttgcatctaaaagattgcattttaagggttagattaatcaatattacatttgaat |
100 |
Q |
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| T |
24261418 |
tcgattaagtttgattgcggatactcacactaatcttccacttgtttgcatctaaaagattgcattttaagggttagattaatcaatattacatttgaat |
24261319 |
T |
|
| Q |
101 |
agcaacatagaagtttaaattcctaaactacgatgacatggtcactaagcaatttcacaaagacaacggctataataatgatcagacacatcgcactatt |
200 |
Q |
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||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
24261318 |
agcaacatagaagtttaaattcctaaattgcgatgacatggtcactaagcaatttcacaaagacaacggctataataatgatcagacacatcgcactatt |
24261219 |
T |
|
| Q |
201 |
aatctatataactgtgtaagataactatctctgct |
235 |
Q |
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|||||||||||||||||||||||||||||| |||| |
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| T |
24261218 |
aatctatataactgtgtaagataactatctttgct |
24261184 |
T |
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