View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11930_low_131 (Length: 242)
Name: NF11930_low_131
Description: NF11930
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11930_low_131 |
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Alignment Details
Target: chr1 (Bit Score: 215; Significance: 1e-118; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 29786115 - 29785893
Alignment:
| Q |
1 |
cttctatcggaactatttccaaagtcacgtgtatgattggttgtgatttattgacaatacataaaaactaagctcttctattattattatccgagtgaca |
100 |
Q |
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| T |
29786115 |
cttctatcggaactatttccaaagtcacgtgtatgattggttgtgatttattgacaatacataaaaactaagctcttctattattattatccgagtgaca |
29786016 |
T |
|
| Q |
101 |
cttattctgtatgtataggatcactggtgcagatgaagtccaatttaatcgataaatcaccacatatagaatcagtggctaggaccctatcatgggatga |
200 |
Q |
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|||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
29786015 |
cttattctgtatgtataggatcactggtgccgatgaagtccaatttaatcgacaaatcaccacatatagaatcagtggctaggaccctatcatgggatga |
29785916 |
T |
|
| Q |
201 |
agattcttgtggagagttagcaa |
223 |
Q |
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||||||||||||||||||||||| |
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| T |
29785915 |
agattcttgtggagagttagcaa |
29785893 |
T |
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