View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11930_low_56 (Length: 407)

Name: NF11930_low_56
Description: NF11930
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11930_low_56
NF11930_low_56
[»] chr3 (47 HSPs)
chr3 (1-318)||(11772587-11772904)
chr3 (1-124)||(11778507-11778630)
chr3 (249-318)||(11778628-11778697)
chr3 (348-407)||(36720421-36720480)
chr3 (332-407)||(44743816-44743891)
chr3 (95-174)||(9853337-9853417)
chr3 (332-407)||(8075088-8075163)
chr3 (332-407)||(10445100-10445175)
chr3 (332-407)||(52769944-52770019)
chr3 (332-406)||(47454578-47454652)
chr3 (87-174)||(9842392-9842480)
chr3 (148-212)||(10264627-10264691)
chr3 (332-407)||(2667902-2667977)
chr3 (332-407)||(4844472-4844547)
chr3 (332-407)||(4870168-4870243)
chr3 (332-407)||(14339650-14339725)
chr3 (24-131)||(10093259-10093364)
chr3 (143-189)||(10130843-10130889)
chr3 (143-189)||(10372126-10372172)
chr3 (129-186)||(10093190-10093247)
chr3 (129-186)||(10200072-10200129)
chr3 (333-406)||(37788428-37788500)
chr3 (348-400)||(8051261-8051313)
chr3 (233-301)||(10532589-10532657)
chr3 (45-131)||(10200141-10200228)
chr3 (332-407)||(30311346-30311421)
chr3 (332-407)||(46518668-46518743)
chr3 (332-407)||(49397502-49397577)
chr3 (332-407)||(51903839-51903914)
chr3 (128-166)||(10130689-10130727)
chr3 (128-166)||(10372288-10372326)
chr3 (348-406)||(14186688-14186746)
chr3 (332-406)||(44069799-44069873)
chr3 (153-186)||(10134711-10134744)
chr3 (333-402)||(25035750-25035819)
chr3 (366-407)||(27259201-27259242)
chr3 (348-389)||(39041958-39041999)
chr3 (332-400)||(2709424-2709492)
chr3 (355-407)||(3427537-3427589)
chr3 (244-280)||(10360125-10360161)
chr3 (233-301)||(10681400-10681468)
chr3 (332-388)||(10969878-10969934)
chr3 (355-407)||(27093345-27093397)
chr3 (355-407)||(28703388-28703440)
chr3 (348-388)||(32151475-32151515)
chr3 (359-407)||(36010782-36010830)
chr3 (355-407)||(53412985-53413037)
[»] chr5 (21 HSPs)
chr5 (332-407)||(16773847-16773922)
chr5 (333-406)||(29173531-29173604)
chr5 (332-407)||(29075821-29075896)
chr5 (333-406)||(29210399-29210472)
chr5 (332-407)||(6844769-6844844)
chr5 (332-407)||(8278236-8278311)
chr5 (332-407)||(12877733-12877808)
chr5 (332-407)||(17028225-17028300)
chr5 (332-407)||(21589328-21589403)
chr5 (350-405)||(35360065-35360120)
chr5 (348-402)||(12669517-12669571)
chr5 (333-395)||(21701094-21701156)
chr5 (333-406)||(37258328-37258401)
chr5 (355-407)||(14285201-14285253)
chr5 (332-407)||(84864-84939)
chr5 (332-395)||(30000168-30000231)
chr5 (333-407)||(18206608-18206682)
chr5 (353-405)||(18437127-18437179)
chr5 (355-407)||(25627097-25627149)
chr5 (355-407)||(26078035-26078087)
chr5 (355-407)||(34984846-34984898)
[»] chr8 (20 HSPs)
chr8 (332-406)||(6536561-6536635)
chr8 (333-407)||(968402-968476)
chr8 (332-395)||(7347889-7347952)
chr8 (332-407)||(16852380-16852455)
chr8 (332-407)||(18540338-18540413)
chr8 (333-405)||(31408084-31408156)
chr8 (332-407)||(11819816-11819891)
chr8 (336-407)||(13129708-13129779)
chr8 (334-407)||(3305151-3305224)
chr8 (332-405)||(8485041-8485114)
chr8 (343-407)||(23361621-23361685)
chr8 (332-407)||(28783100-28783175)
chr8 (336-407)||(29858014-29858085)
chr8 (332-407)||(44780075-44780150)
chr8 (333-379)||(28560674-28560720)
chr8 (348-405)||(18897208-18897265)
chr8 (355-404)||(33017257-33017306)
chr8 (349-406)||(35287757-35287814)
chr8 (332-404)||(8794307-8794378)
chr8 (335-407)||(35641865-35641937)
[»] chr7 (31 HSPs)
chr7 (332-402)||(21558173-21558243)
chr7 (332-407)||(2446348-2446423)
chr7 (332-407)||(7309396-7309470)
chr7 (332-404)||(17040973-17041045)
chr7 (355-407)||(37162334-37162386)
chr7 (332-407)||(17113835-17113910)
chr7 (332-407)||(27313695-27313770)
chr7 (332-395)||(30579387-30579450)
chr7 (336-407)||(42711998-42712069)
chr7 (332-407)||(43590947-43591022)
chr7 (349-407)||(5934161-5934219)
chr7 (353-407)||(23552158-23552212)
chr7 (332-406)||(37473655-37473729)
chr7 (332-406)||(41519226-41519299)
chr7 (332-386)||(42261006-42261060)
chr7 (332-406)||(45228986-45229060)
chr7 (333-406)||(43215225-43215298)
chr7 (355-407)||(26459394-26459446)
chr7 (333-389)||(41975945-41976001)
chr7 (332-395)||(39631896-39631959)
chr7 (348-406)||(2882991-2883049)
chr7 (349-407)||(5830581-5830639)
chr7 (355-405)||(25655212-25655262)
chr7 (349-407)||(37117132-37117190)
chr7 (333-407)||(48771978-48772052)
chr7 (332-405)||(22035440-22035513)
chr7 (332-405)||(38851298-38851370)
chr7 (332-397)||(41487409-41487474)
chr7 (348-388)||(36173090-36173130)
chr7 (333-405)||(45709670-45709742)
chr7 (333-405)||(47902410-47902481)
[»] chr1 (36 HSPs)
chr1 (333-402)||(3799951-3800020)
chr1 (332-407)||(24047063-24047138)
chr1 (333-406)||(27476733-27476806)
chr1 (332-407)||(8177143-8177218)
chr1 (332-403)||(17745218-17745288)
chr1 (348-407)||(21547457-21547516)
chr1 (333-404)||(50901625-50901695)
chr1 (332-405)||(1094567-1094640)
chr1 (332-405)||(12587312-12587384)
chr1 (332-405)||(39979126-39979199)
chr1 (332-407)||(2799902-2799977)
chr1 (332-407)||(6122834-6122909)
chr1 (332-407)||(18037574-18037649)
chr1 (332-407)||(44126435-44126510)
chr1 (355-405)||(8904456-8904506)
chr1 (345-407)||(33700747-33700809)
chr1 (336-406)||(40814373-40814443)
chr1 (336-405)||(51814536-51814605)
chr1 (333-405)||(44961807-44961879)
chr1 (332-407)||(6650635-6650710)
chr1 (332-407)||(10526863-10526938)
chr1 (332-395)||(29753701-29753764)
chr1 (332-407)||(31794225-31794300)
chr1 (332-407)||(40257439-40257514)
chr1 (332-406)||(23398981-23399055)
chr1 (333-407)||(52116743-52116817)
chr1 (367-404)||(2220015-2220052)
chr1 (332-405)||(7219879-7219952)
chr1 (332-405)||(14787297-14787370)
chr1 (334-407)||(23566302-23566375)
chr1 (333-406)||(25494031-25494104)
chr1 (332-405)||(36124875-36124948)
chr1 (333-406)||(42949254-42949327)
chr1 (355-407)||(3265964-3266016)
chr1 (351-407)||(17439957-17440013)
chr1 (348-404)||(31605825-31605881)
[»] scaffold0258 (1 HSPs)
scaffold0258 (332-407)||(15284-15359)
[»] chr6 (19 HSPs)
chr6 (332-407)||(1056646-1056721)
chr6 (332-407)||(12188264-12188339)
chr6 (332-407)||(6758383-6758458)
chr6 (332-407)||(21418510-21418585)
chr6 (333-407)||(3715492-3715566)
chr6 (333-407)||(33549144-33549218)
chr6 (335-407)||(30127440-30127512)
chr6 (350-407)||(16405125-16405182)
chr6 (333-405)||(9583408-9583479)
chr6 (332-388)||(24256783-24256839)
chr6 (348-407)||(13227135-13227194)
chr6 (332-407)||(18562599-18562674)
chr6 (332-407)||(20213081-20213156)
chr6 (332-407)||(22107104-22107179)
chr6 (332-407)||(24641151-24641226)
chr6 (333-407)||(12234469-12234543)
chr6 (369-406)||(346571-346608)
chr6 (332-397)||(18263890-18263955)
chr6 (353-406)||(28841455-28841508)
[»] chr4 (31 HSPs)
chr4 (332-406)||(7949415-7949489)
chr4 (332-407)||(8030165-8030240)
chr4 (336-407)||(13015467-13015538)
chr4 (332-407)||(28635736-28635811)
chr4 (336-407)||(39509110-39509181)
chr4 (332-406)||(30938180-30938254)
chr4 (332-381)||(12793872-12793921)
chr4 (332-407)||(37274420-37274495)
chr4 (129-183)||(17848916-17848970)
chr4 (333-407)||(21660106-21660180)
chr4 (333-407)||(21668870-21668944)
chr4 (333-395)||(37443751-37443813)
chr4 (366-407)||(12798724-12798765)
chr4 (332-405)||(47386752-47386825)
chr4 (355-407)||(23377996-23378048)
chr4 (355-407)||(37109335-37109387)
chr4 (333-405)||(41683791-41683863)
chr4 (332-407)||(7292759-7292834)
chr4 (336-407)||(9936926-9936997)
chr4 (332-407)||(13901782-13901857)
chr4 (332-407)||(38869808-38869883)
chr4 (353-407)||(2622377-2622431)
chr4 (343-405)||(4185135-4185197)
chr4 (336-378)||(29312229-29312271)
chr4 (333-407)||(51250484-51250558)
chr4 (333-406)||(19531964-19532037)
chr4 (333-406)||(46295138-46295211)
chr4 (355-407)||(8306525-8306577)
chr4 (333-405)||(31826651-31826723)
chr4 (332-364)||(49938797-49938829)
chr4 (355-407)||(51969057-51969109)
[»] chr2 (20 HSPs)
chr2 (332-406)||(1435105-1435178)
chr2 (332-407)||(23052484-23052559)
chr2 (333-407)||(19016071-19016145)
chr2 (332-405)||(33582015-33582088)
chr2 (333-405)||(3677315-3677387)
chr2 (355-407)||(11062400-11062452)
chr2 (1-37)||(26910696-26910732)
chr2 (332-407)||(21303955-21304030)
chr2 (332-407)||(25637191-25637266)
chr2 (336-407)||(39715032-39715103)
chr2 (333-407)||(21195638-21195712)
chr2 (332-406)||(41908599-41908673)
chr2 (333-407)||(42327357-42327431)
chr2 (332-405)||(4060175-4060248)
chr2 (368-405)||(7599978-7600015)
chr2 (332-405)||(37480117-37480190)
chr2 (334-379)||(37971963-37972008)
chr2 (332-404)||(2750587-2750659)
chr2 (355-407)||(14500317-14500369)
chr2 (371-407)||(42860388-42860424)
[»] scaffold0021 (1 HSPs)
scaffold0021 (336-407)||(106088-106159)
[»] scaffold0068 (1 HSPs)
scaffold0068 (333-395)||(12754-12816)
[»] scaffold0074 (1 HSPs)
scaffold0074 (345-406)||(45733-45794)
[»] scaffold0008 (1 HSPs)
scaffold0008 (333-405)||(49348-49420)
[»] scaffold0368 (1 HSPs)
scaffold0368 (333-406)||(14927-15000)
[»] scaffold0299 (1 HSPs)
scaffold0299 (366-407)||(11568-11609)


Alignment Details
Target: chr3 (Bit Score: 290; Significance: 1e-162; HSPs: 47)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 290; E-Value: 1e-162
Query Start/End: Original strand, 1 - 318
Target Start/End: Complemental strand, 11772904 - 11772587
Alignment:
Q  1 ttatgttactcaaacaagttgccaatatttagaaccaatagcagcatggattatactacttgttccgtttatctatgctttatatcgcacatgctaacaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||    
T  11772904 ttatgttactcaaacaagttgccaatatttagaaccaatagcagcatggattatactacttgttccgtttatctatgctttatattacacatgctaacaa 11772805  T
Q  101 agcagtgaaacagaaaatttgaaacagtatcatatgaacattcacttaaagctacaaattaagaatattacaaatcctactgcattctaccttgtctaac 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||    
T  11772804 agcagtgaaacagaaaatttgaaacagtatcatatgaacattcacttaaagctacaaattaagaatattacaaatcctaatgcattctactttgtctaac 11772705  T
Q  201 gggatcatgcagcaggttattaggaaggaaacatacaaagatgcattcaaatgataataaaatgcaaactgaatattagccaagtaaatacaatcttgtg 300  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11772704 gggatcatgcagcaggttattaggaaggaaacatacaaagatgcattcaaatgataataaaatgcaaactgaatattagccaagtaaatacaatcttgtg 11772605  T
Q  301 gatatcaatgacaactat 318  Q
    | |||||||  |||||||    
T  11772604 gctatcaattgcaactat 11772587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 11778507 - 11778630
Alignment:
Q  1 ttatgttactcaaacaagttgccaatatttagaaccaatagcagcatggattatactacttgttccgtttatctatgctttatatcgcacatgctaacaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||    
T  11778507 ttatgttactcaaacaagttgccaatatttagaaccaatagcagcatggattatactacttgttccgtttatctatgctttatattacacatgctaacaa 11778606  T
Q  101 agcagtgaaacagaaaatttgaaa 124  Q
    ||||||||||||||||||||||||    
T  11778607 agcagtgaaacagaaaatttgaaa 11778630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 249 - 318
Target Start/End: Original strand, 11778628 - 11778697
Alignment:
Q  249 aaatgataataaaatgcaaactgaatattagccaagtaaatacaatcttgtggatatcaatgacaactat 318  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||  |||||||    
T  11778628 aaatgataataaaatgcaaactgaatattagccaagtaaatacaatcttgtggctatcaattgcaactat 11778697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 348 - 407
Target Start/End: Complemental strand, 36720480 - 36720421
Alignment:
Q  348 cccacctaaattggcacaagagagaatcgaacttgaaacctcgaggagaagcacactccc 407  Q
    ||||||||||||| ||| |||||||||||||| ||||||||||||||| |||||||||||    
T  36720480 cccacctaaattgacactagagagaatcgaacctgaaacctcgaggaggagcacactccc 36720421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 332 - 407
Target Start/End: Original strand, 44743816 - 44743891
Alignment:
Q  332 gaagaagctatattaacccacctaaattggcacaagagagaatcgaacttgaaacctcgaggagaagcacactccc 407  Q
    |||||||||| ||||||||||| ||||||||||  |||| |||||||| ||| ||||||||||| |||||||||||    
T  44743816 gaagaagctaaattaacccacccaaattggcactggagataatcgaacctgagacctcgaggaggagcacactccc 44743891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 95 - 174
Target Start/End: Complemental strand, 9853417 - 9853337
Alignment:
Q  95 taacaaagcagtgaaacagaaaatttgaaacagtatcatatgaacattca-cttaaagctacaaattaagaatattacaaa 174  Q
    |||||||||| || ||||||| |||| |||||||||||||| | ||||||  ||||||| |||||||||||||||||||||    
T  9853417 taacaaagcaatggaacagaagatttcaaacagtatcatattagcattcagtttaaagcaacaaattaagaatattacaaa 9853337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 332 - 407
Target Start/End: Original strand, 8075088 - 8075163
Alignment:
Q  332 gaagaagctatattaacccacctaaattggcacaagagagaatcgaacttgaaacctcgaggagaagcacactccc 407  Q
    |||||||||| |||| |||||| |||||| ||| |||| ||||||||| |||||||| |||||| |||||||||||    
T  8075088 gaagaagctaaattagcccacccaaattgacactagagggaatcgaacctgaaaccttgaggaggagcacactccc 8075163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 332 - 407
Target Start/End: Original strand, 10445100 - 10445175
Alignment:
Q  332 gaagaagctatattaacccacctaaattggcacaagagagaatcgaacttgaaacctcgaggagaagcacactccc 407  Q
    |||||||||| |||| |||||  ||||| |||| |||||||||||||| ||| ||||||||||| |||||||||||    
T  10445100 gaagaagctaaattagcccactcaaattagcaccagagagaatcgaacctgagacctcgaggaggagcacactccc 10445175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 332 - 407
Target Start/End: Original strand, 52769944 - 52770019
Alignment:
Q  332 gaagaagctatattaacccacctaaattggcacaagagagaatcgaacttgaaacctcgaggagaagcacactccc 407  Q
    |||||||||| |||| ||||||||||||| ||| | |||||||||||| ||| ||||| ||||| |||||||||||    
T  52769944 gaagaagctaaattagcccacctaaattgacactaaagagaatcgaacctgagacctcaaggaggagcacactccc 52770019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 332 - 406
Target Start/End: Original strand, 47454578 - 47454652
Alignment:
Q  332 gaagaagctatattaacccacctaaattggcacaagagagaatcgaacttgaaacctcgaggagaagcacactcc 406  Q
    |||||||||| | |||||||||||||||||||   | ||||||||||| ||| ||||||||||| ||||||||||    
T  47454578 gaagaagctaaactaacccacctaaattggcattggggagaatcgaacctgagacctcgaggaggagcacactcc 47454652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 87 - 174
Target Start/End: Complemental strand, 9842480 - 9842392
Alignment:
Q  87 gcacatgctaacaaagcagtgaaacagaaaatttgaaacagtatcatatgaacattcactt-aaagctacaaattaagaatattacaaa 174  Q
    ||||||| ||||||||||  | ||||||| |||| |||||||||||||| | |||| | || ||||| |||||||||||||||||||||    
T  9842480 gcacatgataacaaagcaacggaacagaagatttcaaacagtatcatattagcatttagtttaaagcaacaaattaagaatattacaaa 9842392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 148 - 212
Target Start/End: Complemental strand, 10264691 - 10264627
Alignment:
Q  148 aaagctacaaattaagaatattacaaatcctactgcattctaccttgtctaacgggatcatgcag 212  Q
    |||| ||||||||||||||||||||||||||||| |||| ||| |||||| |  |||||||||||    
T  10264691 aaagttacaaattaagaatattacaaatcctactacattgtactttgtctgatcggatcatgcag 10264627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 332 - 407
Target Start/End: Complemental strand, 2667977 - 2667902
Alignment:
Q  332 gaagaagctatattaacccacctaaattggcacaagagagaatcgaacttgaaacctcgaggagaagcacactccc 407  Q
    |||||||||| | || ||||||||||||| ||| ||||| |||||||| ||| ||||||||||  |||||||||||    
T  2667977 gaagaagctaaactagcccacctaaattgacactagagataatcgaacctgagacctcgaggaagagcacactccc 2667902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 332 - 407
Target Start/End: Original strand, 4844472 - 4844547
Alignment:
Q  332 gaagaagctatattaacccacctaaattggcacaagagagaatcgaacttgaaacctcgaggagaagcacactccc 407  Q
    |||||||||| |||| |||||  ||||||||||  ||||||||||| | ||| ||||||||||| |||||||||||    
T  4844472 gaagaagctaaattagcccacacaaattggcaccggagagaatcgatcctgagacctcgaggaggagcacactccc 4844547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 332 - 407
Target Start/End: Original strand, 4870168 - 4870243
Alignment:
Q  332 gaagaagctatattaacccacctaaattggcacaagagagaatcgaacttgaaacctcgaggagaagcacactccc 407  Q
    |||||||||| |||| |||||  ||||||||||  ||||||||||| | ||| ||||||||||| |||||||||||    
T  4870168 gaagaagctaaattagcccacacaaattggcaccggagagaatcgatcctgagacctcgaggaggagcacactccc 4870243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 332 - 407
Target Start/End: Complemental strand, 14339725 - 14339650
Alignment:
Q  332 gaagaagctatattaacccacctaaattggcacaagagagaatcgaacttgaaacctcgaggagaagcacactccc 407  Q
    |||||||||| |||| ||||||| ||||||||| || ||||||||||| ||| || | |||||| |||||||||||    
T  14339725 gaagaagctaaattagcccaccttaattggcactagggagaatcgaacctgagacattgaggaggagcacactccc 14339650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 24 - 131
Target Start/End: Complemental strand, 10093364 - 10093259
Alignment:
Q  24 aatatttagaaccaatagcagcatggattatactacttgttccgtttatctatgctttat-atcgcacatgctaacaaagcagtgaaacagaaaatttga 122  Q
    ||||||||||||||||| ||   |||||| | ||||||||||| ||||| ||||||| ||  |  ||||| |||||||||||||| ||||||| |||| |    
T  10093364 aatatttagaaccaataaca---tggattcttctacttgttccatttatttatgcttcatgtttccacatactaacaaagcagtggaacagaatatttca 10093268  T
Q  123 aacagtatc 131  Q
    |||||||||    
T  10093267 aacagtatc 10093259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 143 - 189
Target Start/End: Complemental strand, 10130889 - 10130843
Alignment:
Q  143 cacttaaagctacaaattaagaatattacaaatcctactgcattcta 189  Q
    |||| ||||||||||||||||||||||||||| ||||| ||||||||    
T  10130889 cactaaaagctacaaattaagaatattacaaaccctaccgcattcta 10130843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 143 - 189
Target Start/End: Original strand, 10372126 - 10372172
Alignment:
Q  143 cacttaaagctacaaattaagaatattacaaatcctactgcattcta 189  Q
    |||| ||||||||||||||||||||||||||| ||||| ||||||||    
T  10372126 cactaaaagctacaaattaagaatattacaaaccctaccgcattcta 10372172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 129 - 186
Target Start/End: Complemental strand, 10093247 - 10093190
Alignment:
Q  129 atcatatgaacattcacttaaagctacaaattaagaatattacaaatcctactgcatt 186  Q
    ||||||||| ||||  ||||||||||||||  |||||||||||||| |||||||||||    
T  10093247 atcatatgagcatttgcttaaagctacaaagcaagaatattacaaaccctactgcatt 10093190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 129 - 186
Target Start/End: Complemental strand, 10200129 - 10200072
Alignment:
Q  129 atcatatgaacattcacttaaagctacaaattaagaatattacaaatcctactgcatt 186  Q
    ||||||||| ||||  ||||||||||||||  |||||||||||||| |||||||||||    
T  10200129 atcatatgagcatttgcttaaagctacaaagcaagaatattacaaaccctactgcatt 10200072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 333 - 406
Target Start/End: Original strand, 37788428 - 37788500
Alignment:
Q  333 aagaagctatattaacccacctaaattggcacaagagagaatcgaacttgaaacctcgaggagaagcacactcc 406  Q
    ||||||||| ||||||||  | |||||||||| |||||||||||||| ||| |||| |||||| ||||||||||    
T  37788428 aagaagctaaattaacccctc-aaattggcactagagagaatcgaacctgagaccttgaggaggagcacactcc 37788500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 348 - 400
Target Start/End: Complemental strand, 8051313 - 8051261
Alignment:
Q  348 cccacctaaattggcacaagagagaatcgaacttgaaacctcgaggagaagca 400  Q
    |||| ||||||||||||  ||| ||||||||||||| ||||||||||||||||    
T  8051313 cccaactaaattggcaccggagggaatcgaacttgagacctcgaggagaagca 8051261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 233 - 301
Target Start/End: Complemental strand, 10532657 - 10532589
Alignment:
Q  233 atacaaagatgcattcaaatgataataaaatgcaaactgaatattagccaagtaaatacaatcttgtgg 301  Q
    |||||||||||||| |||||||||| ||||| ||||||||| ||| |  || ||||| |||||||||||    
T  10532657 atacaaagatgcatacaaatgataagaaaatacaaactgaaaattggttaattaaatccaatcttgtgg 10532589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 45 - 131
Target Start/End: Complemental strand, 10200228 - 10200141
Alignment:
Q  45 catggattatactacttgttccgtttatctatgctttat-atcgcacatgctaacaaagcagtgaaacagaaaatttgaaacagtatc 131  Q
    |||||||| | ||||||||||| ||||| ||||||| ||  |  ||||| |||||||||||||| ||||||| |||| ||||||||||    
T  10200228 catggattcttctacttgttccatttatttatgcttcatgtttccacatactaacaaagcagtggaacagaatatttcaaacagtatc 10200141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 332 - 407
Target Start/End: Complemental strand, 30311421 - 30311346
Alignment:
Q  332 gaagaagctatattaacccacctaaattggcacaagagagaatcgaacttgaaacctcgaggagaagcacactccc 407  Q
    |||||||||| | |||||| |  |||||||||| | |||||||||||| ||| |||| |||||| |||||||||||    
T  30311421 gaagaagctaaactaaccccctcaaattggcaccaaagagaatcgaacctgagaccttgaggaggagcacactccc 30311346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 332 - 407
Target Start/End: Complemental strand, 46518743 - 46518668
Alignment:
Q  332 gaagaagctatattaacccacctaaattggcacaagagagaatcgaacttgaaacctcgaggagaagcacactccc 407  Q
    |||||||||| | |||||| |  |||||||||  |||||||||| ||| |||||||| |||||| |||||||||||    
T  46518743 gaagaagctaaactaaccccctcaaattggcatcagagagaatcaaacctgaaaccttgaggaggagcacactccc 46518668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 332 - 407
Target Start/End: Original strand, 49397502 - 49397577
Alignment:
Q  332 gaagaagctatattaacccacctaaattggcacaagagagaatcgaacttgaaacctcgaggagaagcacactccc 407  Q
    |||||||||| ||||  |||||||||||| ||    ||| |||||||| ||| |||||||||||||||||||||||    
T  49397502 gaagaagctaaattagtccacctaaattgacatctaagataatcgaacatgagacctcgaggagaagcacactccc 49397577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 332 - 407
Target Start/End: Original strand, 51903839 - 51903914
Alignment:
Q  332 gaagaagctatattaacccacctaaattggcacaagagagaatcgaacttgaaacctcgaggagaagcacactccc 407  Q
    |||||||||| |||| |||||  |||||| |||  ||||||||||||| ||| ||| ||||||| |||||||||||    
T  51903839 gaagaagctaaattagcccactcaaattgacaccggagagaatcgaacctgagaccacgaggaggagcacactccc 51903914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 128 - 166
Target Start/End: Complemental strand, 10130727 - 10130689
Alignment:
Q  128 tatcatatgaacattcacttaaagctacaaattaagaat 166  Q
    |||||||||| ||||||||||||| ||||||||||||||    
T  10130727 tatcatatgagcattcacttaaagttacaaattaagaat 10130689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 128 - 166
Target Start/End: Original strand, 10372288 - 10372326
Alignment:
Q  128 tatcatatgaacattcacttaaagctacaaattaagaat 166  Q
    |||||||||| ||||||||||||| ||||||||||||||    
T  10372288 tatcatatgagcattcacttaaagttacaaattaagaat 10372326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 348 - 406
Target Start/End: Complemental strand, 14186746 - 14186688
Alignment:
Q  348 cccacctaaattggcacaagagagaatcgaacttgaaacctcgaggagaagcacactcc 406  Q
    ||||||||||||| |||  ||||||||||||| ||| |||| |||||| ||||||||||    
T  14186746 cccacctaaattgacaccggagagaatcgaacctgagaccttgaggaggagcacactcc 14186688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 332 - 406
Target Start/End: Complemental strand, 44069873 - 44069799
Alignment:
Q  332 gaagaagctatattaacccacctaaattggcacaagagagaatcgaacttgaaacctcgaggagaagcacactcc 406  Q
    |||||||||| | || |||||||||||||||||  || |||||| ||| ||| |||| |||||| ||||||||||    
T  44069873 gaagaagctaaactagcccacctaaattggcaccggaaagaatcaaacctgagaccttgaggaggagcacactcc 44069799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 153 - 186
Target Start/End: Complemental strand, 10134744 - 10134711
Alignment:
Q  153 tacaaattaagaatattacaaatcctactgcatt 186  Q
    |||||||||||||||||||||| |||||||||||    
T  10134744 tacaaattaagaatattacaaaccctactgcatt 10134711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 333 - 402
Target Start/End: Complemental strand, 25035819 - 25035750
Alignment:
Q  333 aagaagctatattaacccacctaaattggcacaagagagaatcgaacttgaaacctcgaggagaagcaca 402  Q
    |||||| || ||||||||||| |||||| |||  | ||||||||||| ||||| ||||||||| ||||||    
T  25035819 aagaaggtaaattaacccacccaaattgacaccggtgagaatcgaacctgaaatctcgaggaggagcaca 25035750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 366 - 407
Target Start/End: Complemental strand, 27259242 - 27259201
Alignment:
Q  366 agagagaatcgaacttgaaacctcgaggagaagcacactccc 407  Q
    |||||||||| ||| ||||||||||||||| |||||||||||    
T  27259242 agagagaatcaaacctgaaacctcgaggaggagcacactccc 27259201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 348 - 389
Target Start/End: Original strand, 39041958 - 39041999
Alignment:
Q  348 cccacctaaattggcacaagagagaatcgaacttgaaacctc 389  Q
    |||||| |||||||||| |||||||||||||||||| |||||    
T  39041958 cccaccgaaattggcaccagagagaatcgaacttgagacctc 39041999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 332 - 400
Target Start/End: Complemental strand, 2709492 - 2709424
Alignment:
Q  332 gaagaagctatattaacccacctaaattggcacaagagagaatcgaacttgaaacctcgaggagaagca 400  Q
    |||||||||| | |||| |||| |||||||||  |||||||||| ||| | ||||||||||||| ||||    
T  2709492 gaagaagctaaactaactcacccaaattggcatcagagagaatcaaacctaaaacctcgaggaggagca 2709424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 355 - 407
Target Start/End: Original strand, 3427537 - 3427589
Alignment:
Q  355 aaattggcacaagagagaatcgaacttgaaacctcgaggagaagcacactccc 407  Q
    |||||||||| |||||||||||||  ||| |||| |||||| |||||||||||    
T  3427537 aaattggcactagagagaatcgaatctgagaccttgaggaggagcacactccc 3427589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 244 - 280
Target Start/End: Original strand, 10360125 - 10360161
Alignment:
Q  244 cattcaaatgataataaaatgcaaactgaatattagc 280  Q
    |||||||||||||||||||| |||||||| |||||||    
T  10360125 cattcaaatgataataaaatacaaactgactattagc 10360161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 233 - 301
Target Start/End: Complemental strand, 10681468 - 10681400
Alignment:
Q  233 atacaaagatgcattcaaatgataataaaatgcaaactgaatattagccaagtaaatacaatcttgtgg 301  Q
    |||||||||||||| |||||||| | ||||| ||||||||| ||| |  || ||||| |||||||||||    
T  10681468 atacaaagatgcatgcaaatgatcagaaaatacaaactgaaaattggttaattaaatccaatcttgtgg 10681400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 332 - 388
Target Start/End: Original strand, 10969878 - 10969934
Alignment:
Q  332 gaagaagctatattaacccacctaaattggcacaagagagaatcgaacttgaaacct 388  Q
    |||||||||| | |||||| | ||||||||||| |||||||||||||| ||| ||||    
T  10969878 gaagaagctaaactaacccccttaaattggcaccagagagaatcgaacctgagacct 10969934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 355 - 407
Target Start/End: Original strand, 27093345 - 27093397
Alignment:
Q  355 aaattggcacaagagagaatcgaacttgaaacctcgaggagaagcacactccc 407  Q
    |||||||||| |||||||||| ||| ||| |||| |||||| |||||||||||    
T  27093345 aaattggcaccagagagaatcaaacctgagaccttgaggaggagcacactccc 27093397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 355 - 407
Target Start/End: Original strand, 28703388 - 28703440
Alignment:
Q  355 aaattggcacaagagagaatcgaacttgaaacctcgaggagaagcacactccc 407  Q
    |||||||||| |||||||||||||| ||| |||| || ||| |||||||||||    
T  28703388 aaattggcaccagagagaatcgaacctgagaccttgaagaggagcacactccc 28703440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 348 - 388
Target Start/End: Complemental strand, 32151515 - 32151475
Alignment:
Q  348 cccacctaaattggcacaagagagaatcgaacttgaaacct 388  Q
    |||||| |||||||||| ||||||||||||| |||||||||    
T  32151515 cccaccgaaattggcactagagagaatcgaatttgaaacct 32151475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 359 - 407
Target Start/End: Complemental strand, 36010830 - 36010782
Alignment:
Q  359 tggcacaagagagaatcgaacttgaaacctcgaggagaagcacactccc 407  Q
    |||||| |||||||||||||||||| || | |||||| |||||||||||    
T  36010830 tggcaccagagagaatcgaacttgagactttgaggaggagcacactccc 36010782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 355 - 407
Target Start/End: Complemental strand, 53413037 - 53412985
Alignment:
Q  355 aaattggcacaagagagaatcgaacttgaaacctcgaggagaagcacactccc 407  Q
    |||||||||| ||||||||| |||| ||| |||| |||||| |||||||||||    
T  53413037 aaattggcaccagagagaattgaacctgagaccttgaggaggagcacactccc 53412985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 48; Significance: 3e-18; HSPs: 21)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 332 - 407
Target Start/End: Complemental strand, 16773922 - 16773847
Alignment:
Q  332 gaagaagctatattaacccacctaaattggcacaagagagaatcgaacttgaaacctcgaggagaagcacactccc 407  Q
    |||||||||| |||| ||||||||||||||||  |||||||||||||| ||| ||||||||||| |||||||||||    
T  16773922 gaagaagctaaattagcccacctaaattggcatcagagagaatcgaacctgagacctcgaggaggagcacactccc 16773847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 333 - 406
Target Start/End: Complemental strand, 29173604 - 29173531
Alignment:
Q  333 aagaagctatattaacccacctaaattggcacaagagagaatcgaacttgaaacctcgaggagaagcacactcc 406  Q
    ||||||||| |||| ||||||||||||| ||| ||||| |||||||| ||||||||||||||| ||||||||||    
T  29173604 aagaagctaaattagcccacctaaattgacaccagagataatcgaacctgaaacctcgaggaggagcacactcc 29173531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 332 - 407
Target Start/End: Complemental strand, 29075896 - 29075821
Alignment:
Q  332 gaagaagctatattaacccacctaaattggcacaagagagaatcgaacttgaaacctcgaggagaagcacactccc 407  Q
    |||||||||| |||| |||| |||||||||||| |||||||||||||| ||| | ||||||||| |||||||||||    
T  29075896 gaagaagctaaattagcccatctaaattggcaccagagagaatcgaacatgagatctcgaggaggagcacactccc 29075821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 333 - 406
Target Start/End: Complemental strand, 29210472 - 29210399
Alignment:
Q  333 aagaagctatattaacccacctaaattggcacaagagagaatcgaacttgaaacctcgaggagaagcacactcc 406  Q
    ||||||||| ||||  ||||||||||||  || ||||||||| |||||||||||||||||||| ||||||||||    
T  29210472 aagaagctaaattagtccacctaaattgataccagagagaattgaacttgaaacctcgaggaggagcacactcc 29210399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 332 - 407
Target Start/End: Complemental strand, 6844844 - 6844769
Alignment:
Q  332 gaagaagctatattaacccacctaaattggcacaagagagaatcgaacttgaaacctcgaggagaagcacactccc 407  Q
    |||||||||| | ||| |||||||||||||||| ||||| |||||||| | | ||||||||||| | |||||||||    
T  6844844 gaagaagctaaactaatccacctaaattggcacgagagataatcgaaccttagacctcgaggaggaacacactccc 6844769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 332 - 407
Target Start/End: Original strand, 8278236 - 8278311
Alignment:
Q  332 gaagaagctatattaacccacctaaattggcacaagagagaatcgaacttgaaacctcgaggagaagcacactccc 407  Q
    |||||||||| |||| ||||||||||| |||||  |||| |||| ||||||| | ||||||||| |||||||||||    
T  8278236 gaagaagctaaattagcccacctaaatcggcaccggagataatcaaacttgagatctcgaggaggagcacactccc 8278311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 332 - 407
Target Start/End: Complemental strand, 12877808 - 12877733
Alignment:
Q  332 gaagaagctatattaacccacctaaattggcacaagagagaatcgaacttgaaacctcgaggagaagcacactccc 407  Q
    |||||||||| |||| |||||||||||| | || |||||||||||||| ||| || | |||||||| |||||||||    
T  12877808 gaagaagctaaattagcccacctaaattagtaccagagagaatcgaacctgagacattgaggagaaacacactccc 12877733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 332 - 407
Target Start/End: Original strand, 17028225 - 17028300
Alignment:
Q  332 gaagaagctatattaacccacctaaattggcacaagagagaatcgaacttgaaacctcgaggagaagcacactccc 407  Q
    |||||||||| |||| ||||||||||||| ||| |||| ||||| ||| ||| |||| |||||| |||||||||||    
T  17028225 gaagaagctaaattagcccacctaaattgacactagagggaatcaaacctgagaccttgaggaggagcacactccc 17028300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 332 - 407
Target Start/End: Complemental strand, 21589403 - 21589328
Alignment:
Q  332 gaagaagctatattaacccacctaaattggcacaagagagaatcgaacttgaaacctcgaggagaagcacactccc 407  Q
    |||||||||| | || ||||||||||||||||| |||| ||||||||| ||| || |||||||| |||| ||||||    
T  21589403 gaagaagctaaactagcccacctaaattggcaccagagggaatcgaacctgagacatcgaggagtagcagactccc 21589328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 350 - 405
Target Start/End: Original strand, 35360065 - 35360120
Alignment:
Q  350 cacctaaattggcacaagagagaatcgaacttgaaacctcgaggagaagcacactc 405  Q
    |||||||||||||||  | ||||||||||| ||| |||||||||||||||||||||    
T  35360065 cacctaaattggcaccggtgagaatcgaacctgagacctcgaggagaagcacactc 35360120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 348 - 402
Target Start/End: Complemental strand, 12669571 - 12669517
Alignment:
Q  348 cccacctaaattggcacaagagagaatcgaacttgaaacctcgaggagaagcaca 402  Q
    ||||||||||||| ||| |||||||||||||||||||||||  || |||||||||    
T  12669571 cccacctaaattgacaccagagagaatcgaacttgaaaccttaagaagaagcaca 12669517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 333 - 395
Target Start/End: Original strand, 21701094 - 21701156
Alignment:
Q  333 aagaagctatattaacccacctaaattggcacaagagagaatcgaacttgaaacctcgaggag 395  Q
    ||||||||| |||||||||||||||| || ||  ||||||||||||||||| | |||||||||    
T  21701094 aagaagctaaattaacccacctaaatcggtaccggagagaatcgaacttgagatctcgaggag 21701156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 333 - 406
Target Start/End: Original strand, 37258328 - 37258401
Alignment:
Q  333 aagaagctatattaacccacctaaattggcacaagagagaatcgaacttgaaacctcgaggagaagcacactcc 406  Q
    ||||||||| | |||||| |  |||||| ||| |||||||||||||| |||||||| |||||| ||||||||||    
T  37258328 aagaagctaaactaaccccctcaaattgacaccagagagaatcgaacctgaaaccttgaggaggagcacactcc 37258401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 355 - 407
Target Start/End: Complemental strand, 14285253 - 14285201
Alignment:
Q  355 aaattggcacaagagagaatcgaacttgaaacctcgaggagaagcacactccc 407  Q
    |||||||||| |||||||||||||| ||| |||| |||||| |||||||||||    
T  14285253 aaattggcaccagagagaatcgaacctgagaccttgaggaggagcacactccc 14285201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 332 - 407
Target Start/End: Complemental strand, 84939 - 84864
Alignment:
Q  332 gaagaagctatattaacccacctaaattggcacaagagagaatcgaacttgaaacctcgaggagaagcacactccc 407  Q
    |||||||||| |||| |||||| | | ||||||  | ||||||||||||||| |||| |||||| |||||||||||    
T  84939 gaagaagctaaattagcccacccataatggcaccggggagaatcgaacttgagaccttgaggaggagcacactccc 84864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 332 - 395
Target Start/End: Complemental strand, 30000231 - 30000168
Alignment:
Q  332 gaagaagctatattaacccacctaaattggcacaagagagaatcgaacttgaaacctcgaggag 395  Q
    ||||||| || |||||||||| ||||||||||  ||||||| |||||| ||| |||||||||||    
T  30000231 gaagaagttaaattaacccacttaaattggcatcagagagagtcgaacctgagacctcgaggag 30000168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 333 - 407
Target Start/End: Original strand, 18206608 - 18206682
Alignment:
Q  333 aagaagctatattaacccacctaaattggcacaagagagaatcgaacttgaaacctcgaggagaagcacactccc 407  Q
    ||||||||| |||| |||||| |||||||||| ||||||| |||||  || |||||  ||||| |||||||||||    
T  18206608 aagaagctaaattagcccacccaaattggcactagagagagtcgaatctggaacctaaaggaggagcacactccc 18206682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 353 - 405
Target Start/End: Complemental strand, 18437179 - 18437127
Alignment:
Q  353 ctaaattggcacaagagagaatcgaacttgaaacctcgaggagaagcacactc 405  Q
    |||||||||||| ||||||||||||||  ||||| | |||||| |||||||||    
T  18437179 ctaaattggcactagagagaatcgaacccgaaactttgaggaggagcacactc 18437127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 355 - 407
Target Start/End: Complemental strand, 25627149 - 25627097
Alignment:
Q  355 aaattggcacaagagagaatcgaacttgaaacctcgaggagaagcacactccc 407  Q
    |||||| ||| |||||||||||||| ||| |||| |||||| |||||||||||    
T  25627149 aaattgacaccagagagaatcgaacctgagaccttgaggaggagcacactccc 25627097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 355 - 407
Target Start/End: Original strand, 26078035 - 26078087
Alignment:
Q  355 aaattggcacaagagagaatcgaacttgaaacctcgaggagaagcacactccc 407  Q
    |||||||||| |||||||||||||| ||| |||| || |||||||| ||||||    
T  26078035 aaattggcactagagagaatcgaacctgagaccttgaagagaagcatactccc 26078087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 355 - 407
Target Start/End: Complemental strand, 34984898 - 34984846
Alignment:
Q  355 aaattggcacaagagagaatcgaacttgaaacctcgaggagaagcacactccc 407  Q
    |||||||||| |||||||||||||| | | |||| |||||| |||||||||||    
T  34984898 aaattggcaccagagagaatcgaacctaagaccttgaggaggagcacactccc 34984846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 47; Significance: 1e-17; HSPs: 20)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 332 - 406
Target Start/End: Complemental strand, 6536635 - 6536561
Alignment:
Q  332 gaagaagctatattaacccacctaaattggcacaagagagaatcgaacttgaaacctcgaggagaagcacactcc 406  Q
    |||||||||| |||||||||||||||||||||| ||||||||| |||| ||| |||| |||||| ||||||||||    
T  6536635 gaagaagctaaattaacccacctaaattggcaccagagagaattgaacctgagaccttgaggaggagcacactcc 6536561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 333 - 407
Target Start/End: Complemental strand, 968476 - 968402
Alignment:
Q  333 aagaagctatattaacccacctaaattggcacaagagagaatcgaacttgaaacctcgaggagaagcacactccc 407  Q
    ||||||||| |||| ||||||||||||||||   ||||||||||||| ||| ||||||||||| |||||||||||    
T  968476 aagaagctaaattagcccacctaaattggcatcggagagaatcgaacctgagacctcgaggaggagcacactccc 968402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 332 - 395
Target Start/End: Complemental strand, 7347952 - 7347889
Alignment:
Q  332 gaagaagctatattaacccacctaaattggcacaagagagaatcgaacttgaaacctcgaggag 395  Q
    |||||||||| |||| ||||||||||||| ||||||||||||| |||| ||||||||| |||||    
T  7347952 gaagaagctaaattagcccacctaaattgacacaagagagaattgaacctgaaacctcaaggag 7347889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 332 - 407
Target Start/End: Complemental strand, 16852455 - 16852380
Alignment:
Q  332 gaagaagctatattaacccacctaaattggcacaagagagaatcgaacttgaaacctcgaggagaagcacactccc 407  Q
    |||||||||| | || ||||||||||||||||| |  ||||||||||| ||| ||||||||||| |||||||||||    
T  16852455 gaagaagctaaaatagcccacctaaattggcactaaggagaatcgaacctgagacctcgaggaggagcacactccc 16852380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 332 - 407
Target Start/End: Complemental strand, 18540413 - 18540338
Alignment:
Q  332 gaagaagctatattaacccacctaaattggcacaagagagaatcgaacttgaaacctcgaggagaagcacactccc 407  Q
    |||||||||| |||||||| |  |||||||||| |||||||||||||| ||| |||| ||||||||| ||||||||    
T  18540413 gaagaagctaaattaaccctctcaaattggcaccagagagaatcgaacctgagaccttgaggagaagtacactccc 18540338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 333 - 405
Target Start/End: Original strand, 31408084 - 31408156
Alignment:
Q  333 aagaagctatattaacccacctaaattggcacaagagagaatcgaacttgaaacctcgaggagaagcacactc 405  Q
    ||||||||| |||||||| | ||||||| ||  |||||||||||||| |||||||| |||||| |||||||||    
T  31408084 aagaagctaaattaacccccttaaattgacattagagagaatcgaacctgaaaccttgaggaggagcacactc 31408156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 332 - 407
Target Start/End: Complemental strand, 11819891 - 11819816
Alignment:
Q  332 gaagaagctatattaacccacctaaattggcacaagagagaatcgaacttgaaacctcgaggagaagcacactccc 407  Q
    |||||||||| |||| |||||| |||||| ||| |||| ||||||||| ||| |||| |||||| |||||||||||    
T  11819891 gaagaagctaaattagcccacccaaattgacactagagtgaatcgaacctgagaccttgaggaggagcacactccc 11819816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 336 - 407
Target Start/End: Complemental strand, 13129779 - 13129708
Alignment:
Q  336 aagctatattaacccacctaaattggcacaagagagaatcgaacttgaaacctcgaggagaagcacactccc 407  Q
    |||||| ||||| ||| | |||||||||| |||||||||||||| |||||||| |||||| ||| |||||||    
T  13129779 aagctaaattaatccatccaaattggcaccagagagaatcgaacctgaaaccttgaggaggagcgcactccc 13129708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 334 - 407
Target Start/End: Original strand, 3305151 - 3305224
Alignment:
Q  334 agaagctatattaacccacctaaattggcacaagagagaatcgaacttgaaacctcgaggagaagcacactccc 407  Q
    ||||| || |||| ||||||||||||||||| ||||| ||||||| |||| |||| |||||| ||||| |||||    
T  3305151 agaagataaattagcccacctaaattggcaccagagataatcgaatttgagaccttgaggaggagcacgctccc 3305224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 332 - 405
Target Start/End: Complemental strand, 8485114 - 8485041
Alignment:
Q  332 gaagaagctatattaacccacctaaattggcacaagagagaatcgaacttgaaacctcgaggagaagcacactc 405  Q
    |||||||||| |||| |||||||||||||||||  ||||||||||||  ||| ||||| | ||| |||||||||    
T  8485114 gaagaagctaaattagcccacctaaattggcaccggagagaatcgaaaatgagacctcaaagaggagcacactc 8485041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 343 - 407
Target Start/End: Original strand, 23361621 - 23361685
Alignment:
Q  343 attaacccacctaaattggcacaagagagaatcgaacttgaaacctcgaggagaagcacactccc 407  Q
    |||| ||||||||||||| ||| ||||||||| |||| ||| |||| |||||| |||||||||||    
T  23361621 attagcccacctaaattgacaccagagagaattgaacctgagaccttgaggaggagcacactccc 23361685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 332 - 407
Target Start/End: Complemental strand, 28783175 - 28783100
Alignment:
Q  332 gaagaagctatattaacccacctaaattggcacaagagagaatcgaacttgaaacctcgaggagaagcacactccc 407  Q
    |||||||||| |||| |||||| ||||||||||    ||||||||||| ||| |||| |||||| |||||||||||    
T  28783175 gaagaagctaaattagcccacccaaattggcaccgaggagaatcgaacatgagaccttgaggaggagcacactccc 28783100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 336 - 407
Target Start/End: Original strand, 29858014 - 29858085
Alignment:
Q  336 aagctatattaacccacctaaattggcacaagagagaatcgaacttgaaacctcgaggagaagcacactccc 407  Q
    |||||| |||| |||||||||||||||||    | ||||||||| ||| ||||||||||| |||||||||||    
T  29858014 aagctaaattagcccacctaaattggcaccgaggggaatcgaacctgagacctcgaggaggagcacactccc 29858085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 332 - 407
Target Start/End: Original strand, 44780075 - 44780150
Alignment:
Q  332 gaagaagctatattaacccacctaaattggcacaagagagaatcgaacttgaaacctcgaggagaagcacactccc 407  Q
    |||||||||| |||| |||||| |||||| ||| |||| ||||| ||| ||| |||| |||||| |||||||||||    
T  44780075 gaagaagctaaattagcccacccaaattgacactagagggaatcaaacctgagaccttgaggaggagcacactccc 44780150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 333 - 379
Target Start/End: Complemental strand, 28560720 - 28560674
Alignment:
Q  333 aagaagctatattaacccacctaaattggcacaagagagaatcgaac 379  Q
    ||||| ||| ||||||||||||||||| |||| ||||||||||||||    
T  28560720 aagaaactaaattaacccacctaaattagcactagagagaatcgaac 28560674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 348 - 405
Target Start/End: Complemental strand, 18897265 - 18897208
Alignment:
Q  348 cccacctaaattggcacaagagagaatcgaacttgaaacctcgaggagaagcacactc 405  Q
    ||||||||||||||||| ||  |||||||||| ||| |||| |||||| |||||||||    
T  18897265 cccacctaaattggcaccaggaagaatcgaacatgagaccttgaggaggagcacactc 18897208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 355 - 404
Target Start/End: Complemental strand, 33017306 - 33017257
Alignment:
Q  355 aaattggcacaagagagaatcgaacttgaaacctcgaggagaagcacact 404  Q
    |||||||||| |||||||||||||| ||| |||| |||||| ||||||||    
T  33017306 aaattggcaccagagagaatcgaacctgagaccttgaggaggagcacact 33017257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 349 - 406
Target Start/End: Complemental strand, 35287814 - 35287757
Alignment:
Q  349 ccacctaaattggcacaagagagaatcgaacttgaaacctcgaggagaagcacactcc 406  Q
    ||||| ||||||||||  ||||||||||||| ||| |||| |||||| ||||||||||    
T  35287814 ccacccaaattggcaccggagagaatcgaacatgataccttgaggaggagcacactcc 35287757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 332 - 404
Target Start/End: Original strand, 8794307 - 8794378
Alignment:
Q  332 gaagaagctatattaacccacctaaattggcacaagagagaatcgaacttgaaacctcgaggagaagcacact 404  Q
    |||||||||| |||||||| | |||||||| || |||||||||||||| ||| |||  |||||| ||||||||    
T  8794307 gaagaagctaaattaaccc-cttaaattggtaccagagagaatcgaacctgagaccctgaggaggagcacact 8794378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 335 - 407
Target Start/End: Original strand, 35641865 - 35641937
Alignment:
Q  335 gaagctatattaacccacctaaattggcacaagagagaatcgaacttgaaacctcgaggagaagcacactccc 407  Q
    ||||||| |||| |||| |||||||||  |  ||||||||||||| ||| || |||||||| |||||||||||    
T  35641865 gaagctaaattagcccatctaaattggttctggagagaatcgaacctgagacatcgaggaggagcacactccc 35641937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 47; Significance: 1e-17; HSPs: 31)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 332 - 402
Target Start/End: Complemental strand, 21558243 - 21558173
Alignment:
Q  332 gaagaagctatattaacccacctaaattggcacaagagagaatcgaacttgaaacctcgaggagaagcaca 402  Q
    |||||||||| |||||||||||||||||||||| |||||||||||||| ||| |||| |||||| ||||||    
T  21558243 gaagaagctaaattaacccacctaaattggcaccagagagaatcgaacctgagaccttgaggaggagcaca 21558173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 332 - 407
Target Start/End: Complemental strand, 2446423 - 2446348
Alignment:
Q  332 gaagaagctatattaacccacctaaattggcacaagagagaatcgaacttgaaacctcgaggagaagcacactccc 407  Q
    |||||||||| |||| ||||||||||| |||||  ||||||||||||||||| | ||||||||| |||||||||||    
T  2446423 gaagaagctaaattagcccacctaaatcggcaccggagagaatcgaacttgagatctcgaggaggagcacactccc 2446348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 332 - 407
Target Start/End: Complemental strand, 7309470 - 7309396
Alignment:
Q  332 gaagaagctatattaacccacctaaattggcacaagagagaatcgaacttgaaacctcgaggagaagcacactccc 407  Q
    |||||||||| |||| ||||| ||||||| |||  ||||||||||||||||| ||||||||||| |||||||||||    
T  7309470 gaagaagctaaattagcccacttaaattgacacg-gagagaatcgaacttgagacctcgaggaggagcacactccc 7309396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 332 - 404
Target Start/End: Original strand, 17040973 - 17041045
Alignment:
Q  332 gaagaagctatattaacccacctaaattggcacaagagagaatcgaacttgaaacctcgaggagaagcacact 404  Q
    |||||||||| ||| ||||||| ||||||||||  ||||||||||||| ||| |||| |||||| ||||||||    
T  17040973 gaagaagctaaattgacccacccaaattggcacttgagagaatcgaacctgagaccttgaggaggagcacact 17041045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 355 - 407
Target Start/End: Original strand, 37162334 - 37162386
Alignment:
Q  355 aaattggcacaagagagaatcgaacttgaaacctcgaggagaagcacactccc 407  Q
    |||||||||| |||||||||||||||||| |||| ||| ||||||||||||||    
T  37162334 aaattggcaccagagagaatcgaacttgagaccttgagaagaagcacactccc 37162386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 332 - 407
Target Start/End: Complemental strand, 17113910 - 17113835
Alignment:
Q  332 gaagaagctatattaacccacctaaattggcacaagagagaatcgaacttgaaacctcgaggagaagcacactccc 407  Q
    |||||||||| | |||||| |  ||||| |||  |||||||||||||||||| |||| ||||||||||||||||||    
T  17113910 gaagaagctaaactaaccccctcaaattagcatcagagagaatcgaacttgagaccttgaggagaagcacactccc 17113835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 332 - 407
Target Start/End: Original strand, 27313695 - 27313770
Alignment:
Q  332 gaagaagctatattaacccacctaaattggcacaagagagaatcgaacttgaaacctcgaggagaagcacactccc 407  Q
    |||||||||| |||| | ||||||||||||||  |||||||||||||  |||||||| |||||| |||| ||||||    
T  27313695 gaagaagctaaattagctcacctaaattggcatcagagagaatcgaatctgaaaccttgaggaggagcaaactccc 27313770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 332 - 395
Target Start/End: Complemental strand, 30579450 - 30579387
Alignment:
Q  332 gaagaagctatattaacccacctaaattggcacaagagagaatcgaacttgaaacctcgaggag 395  Q
    |||||||||| |||| ||||||||||||||||| ||||| |||||||| ||| |||| ||||||    
T  30579450 gaagaagctaaattagcccacctaaattggcaccagagaaaatcgaacctgagaccttgaggag 30579387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 336 - 407
Target Start/End: Complemental strand, 42712069 - 42711998
Alignment:
Q  336 aagctatattaacccacctaaattggcacaagagagaatcgaacttgaaacctcgaggagaagcacactccc 407  Q
    |||||| |||| ||||||||||||| ||| || ||||||||||| ||| |||| |||||| |||||||||||    
T  42712069 aagctaaattagcccacctaaattgacactagggagaatcgaacatgagaccttgaggaggagcacactccc 42711998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 332 - 407
Target Start/End: Complemental strand, 43591022 - 43590947
Alignment:
Q  332 gaagaagctatattaacccacctaaattggcacaagagagaatcgaacttgaaacctcgaggagaagcacactccc 407  Q
    |||||||||| |||| ||||||| ||||||||| || ||||||||||| ||| || | |||||| |||||||||||    
T  43591022 gaagaagctaaattagcccaccttaattggcactagggagaatcgaacctgagacattgaggaggagcacactccc 43590947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 349 - 407
Target Start/End: Complemental strand, 5934219 - 5934161
Alignment:
Q  349 ccacctaaattggcacaagagagaatcgaacttgaaacctcgaggagaagcacactccc 407  Q
    |||||||||||| ||| |||| ||||||||| ||||||||| ||||| |||||||||||    
T  5934219 ccacctaaattgacaccagagggaatcgaacatgaaacctcaaggaggagcacactccc 5934161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 353 - 407
Target Start/End: Complemental strand, 23552212 - 23552158
Alignment:
Q  353 ctaaattggcacaagagagaatcgaacttgaaacctcgaggagaagcacactccc 407  Q
    |||||||||||  |||||||||||||||||| |||| |||||| |||||||||||    
T  23552212 ctaaattggcattagagagaatcgaacttgagaccttgaggaggagcacactccc 23552158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 332 - 406
Target Start/End: Complemental strand, 37473729 - 37473655
Alignment:
Q  332 gaagaagctatattaacccacctaaattggcacaagagagaatcgaacttgaaacctcgaggagaagcacactcc 406  Q
    |||||||||| |||||||||||||||||| ||  || ||||||||||| ||| ||||| ||||| |||| |||||    
T  37473729 gaagaagctaaattaacccacctaaattgacattagggagaatcgaacctgagacctcaaggaggagcaaactcc 37473655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 332 - 406
Target Start/End: Original strand, 41519226 - 41519299
Alignment:
Q  332 gaagaagctatattaacccacctaaattggcacaagagagaatcgaacttgaaacctcgaggagaagcacactcc 406  Q
    |||||||||| |||| ||||||||||||| ||| |||||||| ||||| ||| |||| |||||| ||||||||||    
T  41519226 gaagaagctaaattagcccacctaaattgacac-agagagaagcgaacctgagaccttgaggaggagcacactcc 41519299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 332 - 386
Target Start/End: Original strand, 42261006 - 42261060
Alignment:
Q  332 gaagaagctatattaacccacctaaattggcacaagagagaatcgaacttgaaac 386  Q
    |||||||||| | |||||||||||||||||||| |||||||||| ||| ||||||    
T  42261006 gaagaagctaaactaacccacctaaattggcactagagagaatcaaacctgaaac 42261060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 332 - 406
Target Start/End: Original strand, 45228986 - 45229060
Alignment:
Q  332 gaagaagctatattaacccacctaaattggcacaagagagaatcgaacttgaaacctcgaggagaagcacactcc 406  Q
    |||||||||| |||| ||||| ||||||| |||  ||||||||||||| | ||||||| || |||||||||||||    
T  45228986 gaagaagctaaattagcccacttaaattgacactggagagaatcgaacctaaaacctcaagaagaagcacactcc 45229060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 333 - 406
Target Start/End: Complemental strand, 43215298 - 43215225
Alignment:
Q  333 aagaagctatattaacccacctaaattggcacaagagagaatcgaacttgaaacctcgaggagaagcacactcc 406  Q
    ||||||||| | |||||| |  ||||||||| ||||||||||||||| ||| |||| |||||| ||||||||||    
T  43215298 aagaagctaaactaaccccctcaaattggcataagagagaatcgaacctgagaccttgaggaggagcacactcc 43215225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 355 - 407
Target Start/End: Original strand, 26459394 - 26459446
Alignment:
Q  355 aaattggcacaagagagaatcgaacttgaaacctcgaggagaagcacactccc 407  Q
    |||||||||| |||||||||||||| ||| |||| |||||| |||||||||||    
T  26459394 aaattggcaccagagagaatcgaacctgagaccttgaggaggagcacactccc 26459446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 333 - 389
Target Start/End: Complemental strand, 41976001 - 41975945
Alignment:
Q  333 aagaagctatattaacccacctaaattggcacaagagagaatcgaacttgaaacctc 389  Q
    ||||||||| |||| ||||| ||||||| ||| |||||||||||||||||| |||||    
T  41976001 aagaagctaaattagcccacttaaattgacactagagagaatcgaacttgagacctc 41975945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 332 - 395
Target Start/End: Complemental strand, 39631959 - 39631896
Alignment:
Q  332 gaagaagctatattaacccacctaaattggcacaagagagaatcgaacttgaaacctcgaggag 395  Q
    |||||||||| | |||||| |  ||||||||||||||||||||||||| ||| |||| ||||||    
T  39631959 gaagaagctaaactaaccccctcaaattggcacaagagagaatcgaacctgagaccttgaggag 39631896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 348 - 406
Target Start/End: Complemental strand, 2883049 - 2882991
Alignment:
Q  348 cccacctaaattggcacaagagagaatcgaacttgaaacctcgaggagaagcacactcc 406  Q
    ||||||||||||| ||| ||||||||| |||| ||| |||| |||||| ||||||||||    
T  2883049 cccacctaaattgccaccagagagaattgaacctgagaccttgaggaggagcacactcc 2882991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 349 - 407
Target Start/End: Original strand, 5830581 - 5830639
Alignment:
Q  349 ccacctaaattggcacaagagagaatcgaacttgaaacctcgaggagaagcacactccc 407  Q
    |||||||||||| ||| ||||| |||||||||||||| || |||||| || ||||||||    
T  5830581 ccacctaaattgacactagagataatcgaacttgaaatcttgaggaggagtacactccc 5830639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 355 - 405
Target Start/End: Original strand, 25655212 - 25655262
Alignment:
Q  355 aaattggcacaagagagaatcgaacttgaaacctcgaggagaagcacactc 405  Q
    |||||||||| |||||||||||||| |||||||| |||||| | |||||||    
T  25655212 aaattggcaccagagagaatcgaacctgaaaccttgaggaggatcacactc 25655262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 349 - 407
Target Start/End: Original strand, 37117132 - 37117190
Alignment:
Q  349 ccacctaaattggcacaagagagaatcgaacttgaaacctcgaggagaagcacactccc 407  Q
    ||||||||||||||||  |||||||||||||  |||||||| ||||| || ||||||||    
T  37117132 ccacctaaattggcaccggagagaatcgaacccgaaacctcaaggaggagtacactccc 37117190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 333 - 407
Target Start/End: Complemental strand, 48772052 - 48771978
Alignment:
Q  333 aagaagctatattaacccacctaaattggcacaagagagaatcgaacttgaaacctcgaggagaagcacactccc 407  Q
    ||||||||| |||| |||||||||||||| ||  | || |||||||| ||| ||||| ||||| |||||||||||    
T  48772052 aagaagctaaattagcccacctaaattggtacttgggataatcgaacctgagacctcaaggaggagcacactccc 48771978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 332 - 405
Target Start/End: Complemental strand, 22035513 - 22035440
Alignment:
Q  332 gaagaagctatattaacccacctaaattggcacaagagagaatcgaacttgaaacctcgaggagaagcacactc 405  Q
    |||||||||| ||||  |||| ||||||| |||| ||||||||||||| ||   |||||||||| |||||||||    
T  22035513 gaagaagctaaattagtccacttaaattgacacaggagagaatcgaacctgggtcctcgaggaggagcacactc 22035440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 332 - 405
Target Start/End: Complemental strand, 38851370 - 38851298
Alignment:
Q  332 gaagaagctatattaacccacctaaattggcacaagagagaatcgaacttgaaacctcgaggagaagcacactc 405  Q
    |||||||||| |||||||||| | ||||  ||  |||||||||| ||| |||||||| ||||||||||||||||    
T  38851370 gaagaagctaaattaacccac-tcaattaacaacagagagaatcaaacatgaaaccttgaggagaagcacactc 38851298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 332 - 397
Target Start/End: Complemental strand, 41487474 - 41487409
Alignment:
Q  332 gaagaagctatattaacccacctaaattggcacaagagagaatcgaacttgaaacctcgaggagaa 397  Q
    |||||||||| |||| |||||||||||||||||  |  |||||||||| ||| |||| ||||||||    
T  41487474 gaagaagctaaattagcccacctaaattggcaccgggaagaatcgaacctgagaccttgaggagaa 41487409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 348 - 388
Target Start/End: Complemental strand, 36173130 - 36173090
Alignment:
Q  348 cccacctaaattggcacaagagagaatcgaacttgaaacct 388  Q
    |||||| ||||||||||||||| ||||||||| ||||||||    
T  36173130 cccaccaaaattggcacaagagggaatcgaacctgaaacct 36173090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 333 - 405
Target Start/End: Original strand, 45709670 - 45709742
Alignment:
Q  333 aagaagctatattaacccacctaaattggcacaagagagaatcgaacttgaaacctcgaggagaagcacactc 405  Q
    |||||||||  ||| |||||||||||||| |   |||| |||||||| ||| ||||||||||| |||||||||    
T  45709670 aagaagctaagttagcccacctaaattggtatcggagataatcgaacctgagacctcgaggaggagcacactc 45709742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 333 - 405
Target Start/End: Original strand, 47902410 - 47902481
Alignment:
Q  333 aagaagctatattaacccacctaaattggcacaagagagaatcgaacttgaaacctcgaggagaagcacactc 405  Q
    ||||| ||| |||||||||||||||||||||  | | |||||||||| |||||| | ||| ||||||||||||    
T  47902410 aagaatctaaattaacccacctaaattggcatga-aaagaatcgaacgtgaaactttgagaagaagcacactc 47902481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 46; Significance: 4e-17; HSPs: 36)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 333 - 402
Target Start/End: Complemental strand, 3800020 - 3799951
Alignment:
Q  333 aagaagctatattaacccacctaaattggcacaagagagaatcgaacttgaaacctcgaggagaagcaca 402  Q
    ||||||||| |||| ||||||||||||||||| |||||||||||||| |||||| |||||||| ||||||    
T  3800020 aagaagctaaattagcccacctaaattggcactagagagaatcgaacctgaaacttcgaggaggagcaca 3799951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 332 - 407
Target Start/End: Original strand, 24047063 - 24047138
Alignment:
Q  332 gaagaagctatattaacccacctaaattggcacaagagagaatcgaacttgaaacctcgaggagaagcacactccc 407  Q
    ||||||| || |||| || ||||||||||||||  | ||||||||||||||||||||||||||| |||||||||||    
T  24047063 gaagaagttaaattagccaacctaaattggcactggggagaatcgaacttgaaacctcgaggaggagcacactccc 24047138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 333 - 406
Target Start/End: Original strand, 27476733 - 27476806
Alignment:
Q  333 aagaagctatattaacccacctaaattggcacaagagagaatcgaacttgaaacctcgaggagaagcacactcc 406  Q
    ||||||||| |||| ||||||||||| ||||| |||||||||| ||||||| | ||||||||| ||||||||||    
T  27476733 aagaagctaaattagcccacctaaatcggcaccagagagaatcaaacttgagatctcgaggaggagcacactcc 27476806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 332 - 407
Target Start/End: Original strand, 8177143 - 8177218
Alignment:
Q  332 gaagaagctatattaacccacctaaattggcacaagagagaatcgaacttgaaacctcgaggagaagcacactccc 407  Q
    |||||||||| | |||||| |  |||||||||| |||||||||||||| |||||||| |||||| |||||||||||    
T  8177143 gaagaagctaaactaaccccctcaaattggcaccagagagaatcgaacctgaaaccttgaggaggagcacactccc 8177218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 332 - 403
Target Start/End: Original strand, 17745218 - 17745288
Alignment:
Q  332 gaagaagctatattaacccacctaaattggcacaagagagaatcgaacttgaaacctcgaggagaagcacac 403  Q
    |||||||||| ||||||| |||||||||| ||| |||||||||||||| ||| ||||||||||| |||||||    
T  17745218 gaagaagctaaattaacc-acctaaattgacaccagagagaatcgaacatgagacctcgaggaggagcacac 17745288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 348 - 407
Target Start/End: Original strand, 21547457 - 21547516
Alignment:
Q  348 cccacctaaattggcacaagagagaatcgaacttgaaacctcgaggagaagcacactccc 407  Q
    ||||||||||||||||  |||||||||||||| ||||||||||||||| ||||| |||||    
T  21547457 cccacctaaattggcatcagagagaatcgaacctgaaacctcgaggaggagcaccctccc 21547516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 333 - 404
Target Start/End: Complemental strand, 50901695 - 50901625
Alignment:
Q  333 aagaagctatattaacccacctaaattggcacaagagagaatcgaacttgaaacctcgaggagaagcacact 404  Q
    ||||||||| |||| |||||||||||||||||  |||||||||||| |||| ||||||||||| ||||||||    
T  50901695 aagaagctaaattagcccacctaaattggcact-gagagaatcgaatttgagacctcgaggaggagcacact 50901625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 332 - 405
Target Start/End: Complemental strand, 1094640 - 1094567
Alignment:
Q  332 gaagaagctatattaacccacctaaattggcacaagagagaatcgaacttgaaacctcgaggagaagcacactc 405  Q
    ||||||| || |||| |||||||||||||||||  |||||||||||| |||| |||||| |||| |||||||||    
T  1094640 gaagaagttaaattagcccacctaaattggcaccggagagaatcgaatttgagacctcgtggaggagcacactc 1094567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 332 - 405
Target Start/End: Complemental strand, 12587384 - 12587312
Alignment:
Q  332 gaagaagctatattaacccacctaaattggcacaagagagaatcgaacttgaaacctcgaggagaagcacactc 405  Q
    |||||||||| |||| ||||||||||||| |||  ||||||||||||| ||| ||||||||||| |||||||||    
T  12587384 gaagaagctaaattagcccacctaaattg-caccggagagaatcgaacctgagacctcgaggaggagcacactc 12587312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 332 - 405
Target Start/End: Complemental strand, 39979199 - 39979126
Alignment:
Q  332 gaagaagctatattaacccacctaaattggcacaagagagaatcgaacttgaaacctcgaggagaagcacactc 405  Q
    |||||||||| |||||| |||| ||||||||||| |||| |||||||  ||| ||||||||||| |||||||||    
T  39979199 gaagaagctaaattaacacacccaaattggcacatgagataatcgaatatgatacctcgaggaggagcacactc 39979126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 332 - 407
Target Start/End: Complemental strand, 2799977 - 2799902
Alignment:
Q  332 gaagaagctatattaacccacctaaattggcacaagagagaatcgaacttgaaacctcgaggagaagcacactccc 407  Q
    |||||||||| | |||||| |  |||||||||| |||||||||||||| ||| |||| |||||| |||||||||||    
T  2799977 gaagaagctaaactaaccccctcaaattggcaccagagagaatcgaacctgagaccttgaggaggagcacactccc 2799902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 332 - 407
Target Start/End: Complemental strand, 6122909 - 6122834
Alignment:
Q  332 gaagaagctatattaacccacctaaattggcacaagagagaatcgaacttgaaacctcgaggagaagcacactccc 407  Q
    |||||||||| |||| |||||| |||||| ||| |||| ||||||||| ||| |||| |||||| |||||||||||    
T  6122909 gaagaagctaaattagcccacccaaattgacactagagggaatcgaacctgagaccttgaggaggagcacactccc 6122834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 332 - 407
Target Start/End: Original strand, 18037574 - 18037649
Alignment:
Q  332 gaagaagctatattaacccacctaaattggcacaagagagaatcgaacttgaaacctcgaggagaagcacactccc 407  Q
    |||||||||| |||| ||||||||||| |||||  ||||||||||||||||| | |||||  || |||||||||||    
T  18037574 gaagaagctaaattagcccacctaaatcggcaccggagagaatcgaacttgagatctcgaaaaggagcacactccc 18037649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 332 - 407
Target Start/End: Complemental strand, 44126510 - 44126435
Alignment:
Q  332 gaagaagctatattaacccacctaaattggcacaagagagaatcgaacttgaaacctcgaggagaagcacactccc 407  Q
    |||||||||| |||| || |||||||||||||| |||||||||| ||  ||| |||||| |||| |||||||||||    
T  44126510 gaagaagctaaattagcctacctaaattggcactagagagaatcaaatctgagacctcgtggaggagcacactccc 44126435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 355 - 405
Target Start/End: Complemental strand, 8904506 - 8904456
Alignment:
Q  355 aaattggcacaagagagaatcgaacttgaaacctcgaggagaagcacactc 405  Q
    |||||||||| |||||||||||||||||| |||| |||||| |||||||||    
T  8904506 aaattggcaccagagagaatcgaacttgagaccttgaggaggagcacactc 8904456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 345 - 407
Target Start/End: Original strand, 33700747 - 33700809
Alignment:
Q  345 taacccacctaaattggcacaagagagaatcgaacttgaaacctcgaggagaagcacactccc 407  Q
    |||||| | ||||||||||| |||||||||||||| ||| |||| |||||| |||||||||||    
T  33700747 taacccccttaaattggcaccagagagaatcgaacctgagaccttgaggaggagcacactccc 33700809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 336 - 406
Target Start/End: Original strand, 40814373 - 40814443
Alignment:
Q  336 aagctatattaacccacctaaattggcacaagagagaatcgaacttgaaacctcgaggagaagcacactcc 406  Q
    |||||| |||| ||||| ||||||| ||| |||||||||||||| ||||||||| ||||  ||||||||||    
T  40814373 aagctaaattagcccacttaaattgacactagagagaatcgaacctgaaacctcaaggatgagcacactcc 40814443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 336 - 405
Target Start/End: Complemental strand, 51814605 - 51814536
Alignment:
Q  336 aagctatattaacccacctaaattggcacaagagagaatcgaacttgaaacctcgaggagaagcacactc 405  Q
    |||||| |||| |||||| ||||||||||  ||||||||||||| ||| |||| |||||| |||||||||    
T  51814605 aagctaaattagcccacccaaattggcaccggagagaatcgaacctgagaccttgaggaggagcacactc 51814536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 333 - 405
Target Start/End: Complemental strand, 44961879 - 44961807
Alignment:
Q  333 aagaagctatattaacccacctaaattggcacaagagagaatcgaacttgaaacctcgaggagaagcacactc 405  Q
    ||||||||| |||| |||||| |||||| ||| |||||||||||||| ||| |||  |||||| |||||||||    
T  44961879 aagaagctaaattagcccacccaaattgacactagagagaatcgaacctgagaccctgaggaggagcacactc 44961807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 332 - 407
Target Start/End: Complemental strand, 6650710 - 6650635
Alignment:
Q  332 gaagaagctatattaacccacctaaattggcacaagagagaatcgaacttgaaacctcgaggagaagcacactccc 407  Q
    |||||||||| | ||| |||||||||||| ||| |||||||||||||| ||| || | |||||| |||| ||||||    
T  6650710 gaagaagctaaactaatccacctaaattgacaccagagagaatcgaacctgagacattgaggaggagcatactccc 6650635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 332 - 407
Target Start/End: Complemental strand, 10526938 - 10526863
Alignment:
Q  332 gaagaagctatattaacccacctaaattggcacaagagagaatcgaacttgaaacctcgaggagaagcacactccc 407  Q
    |||||||||| ||||||||||| |||||| | | |||||||||||||  ||| |||| |||||| |||| ||||||    
T  10526938 gaagaagctaaattaacccacccaaattgactccagagagaatcgaatctgagaccttgaggaggagcaaactccc 10526863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 332 - 395
Target Start/End: Complemental strand, 29753764 - 29753701
Alignment:
Q  332 gaagaagctatattaacccacctaaattggcacaagagagaatcgaacttgaaacctcgaggag 395  Q
    |||||||||| | |||||| | ||||||||||| |||||||||||||| ||| |||| ||||||    
T  29753764 gaagaagctaaactaaccctcttaaattggcaccagagagaatcgaacctgagaccttgaggag 29753701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 332 - 407
Target Start/End: Original strand, 31794225 - 31794300
Alignment:
Q  332 gaagaagctatattaacccacctaaattggcacaagagagaatcgaacttgaaacctcgaggagaagcacactccc 407  Q
    |||||||||| |||| |||||| |||||| ||| |||| ||||||||||  | |||| |||||| |||||||||||    
T  31794225 gaagaagctaaattagcccacccaaattgacaccagagggaatcgaactctagaccttgaggaggagcacactccc 31794300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 332 - 407
Target Start/End: Complemental strand, 40257514 - 40257439
Alignment:
Q  332 gaagaagctatattaacccacctaaattggcacaagagagaatcgaacttgaaacctcgaggagaagcacactccc 407  Q
    |||||||||| | || |||||| |||||| |||  || ||||| |||||||| ||||||||||| |||||||||||    
T  40257514 gaagaagctaaactagcccacccaaattgacaccggatagaattgaacttgagacctcgaggaggagcacactccc 40257439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 332 - 406
Target Start/End: Complemental strand, 23399055 - 23398981
Alignment:
Q  332 gaagaagctatattaacccacctaaattggcacaagagagaatcgaacttgaaacctcgaggagaagcacactcc 406  Q
    |||||||||| || ||||||| ||||||| || |||  |||||||||||||| |||| ||| |||| ||||||||    
T  23399055 gaagaagctaaatgaacccacttaaattgacataaggaagaatcgaacttgagaccttgagaagaaacacactcc 23398981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 333 - 407
Target Start/End: Original strand, 52116743 - 52116817
Alignment:
Q  333 aagaagctatattaacccacctaaattggcacaagagagaatcgaacttgaaacctcgaggagaagcacactccc 407  Q
    ||||||||| |||| ||||||| ||||||||| || |||||| |||| ||| || | |||||| |||||||||||    
T  52116743 aagaagctaaattagcccaccttaattggcactagggagaattgaacctgagacattgaggaggagcacactccc 52116817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 367 - 404
Target Start/End: Complemental strand, 2220052 - 2220015
Alignment:
Q  367 gagagaatcgaacttgaaacctcgaggagaagcacact 404  Q
    ||||||||||||| ||| ||||||||||||||||||||    
T  2220052 gagagaatcgaacctgagacctcgaggagaagcacact 2220015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 332 - 405
Target Start/End: Original strand, 7219879 - 7219952
Alignment:
Q  332 gaagaagctatattaacccacctaaattggcacaagagagaatcgaacttgaaacctcgaggagaagcacactc 405  Q
    |||||||||| ||||  ||||||||||||| |  | |||||||||||| ||| || |||||||| |||||||||    
T  7219879 gaagaagctaaattagtccacctaaattggtatcaaagagaatcgaacctgagacttcgaggaggagcacactc 7219952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 332 - 405
Target Start/End: Original strand, 14787297 - 14787370
Alignment:
Q  332 gaagaagctatattaacccacctaaattggcacaagagagaatcgaacttgaaacctcgaggagaagcacactc 405  Q
    |||||||||| | |||||||| |||||||  |  |||||||||||||| ||| |||| |||||||| |||||||    
T  14787297 gaagaagctaaactaacccacttaaattgatattagagagaatcgaacctgacaccttgaggagaaacacactc 14787370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 334 - 407
Target Start/End: Original strand, 23566302 - 23566375
Alignment:
Q  334 agaagctatattaacccacctaaattggcacaagagagaatcgaacttgaaacctcgaggagaagcacactccc 407  Q
    |||||||| |||  |||||||||| || ||| ||||||||| |||| ||||||||  ||||| |||||||||||    
T  23566302 agaagctaaatttgcccacctaaactgccaccagagagaatagaacctgaaacctttaggaggagcacactccc 23566375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 333 - 406
Target Start/End: Original strand, 25494031 - 25494104
Alignment:
Q  333 aagaagctatattaacccacctaaattggcacaagagagaatcgaacttgaaacctcgaggagaagcacactcc 406  Q
    |||||| || |||| |||| |||||||| ||| || ||||| |||||| || |||||||||||||||| |||||    
T  25494031 aagaagttaaattagcccatctaaattgtcactagggagaagcgaactcgagacctcgaggagaagcaaactcc 25494104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 332 - 405
Target Start/End: Complemental strand, 36124948 - 36124875
Alignment:
Q  332 gaagaagctatattaacccacctaaattggcacaagagagaatcgaacttgaaacctcgaggagaagcacactc 405  Q
    |||||||||| |||| ||||||||||||||| | ||  || ||| ||||||| ||||| ||||| |||||||||    
T  36124948 gaagaagctaaattagcccacctaaattggcgctaggaaggatcaaacttgagacctcaaggaggagcacactc 36124875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 333 - 406
Target Start/End: Original strand, 42949254 - 42949327
Alignment:
Q  333 aagaagctatattaacccacctaaattggcacaagagagaatcgaacttgaaacctcgaggagaagcacactcc 406  Q
    ||||||||| |||| ||||| ||||||| |||  ||||||||| ||  ||| ||||||||||| ||||||||||    
T  42949254 aagaagctaaattagcccacttaaattgtcaccggagagaatcaaatatgagacctcgaggaggagcacactcc 42949327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 355 - 407
Target Start/End: Complemental strand, 3266016 - 3265964
Alignment:
Q  355 aaattggcacaagagagaatcgaacttgaaacctcgaggagaagcacactccc 407  Q
    ||||||| || |||||||||||||| ||| |||| |||||| |||||||||||    
T  3266016 aaattggaaccagagagaatcgaacctgagaccttgaggaggagcacactccc 3265964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 351 - 407
Target Start/End: Complemental strand, 17440013 - 17439957
Alignment:
Q  351 acctaaattggcacaagagagaatcgaacttgaaacctcgaggagaagcacactccc 407  Q
    |||||||||| |||  ||||||||| ||| ||| ||||||||||| |||||||||||    
T  17440013 acctaaattgacactggagagaatcaaacatgagacctcgaggaggagcacactccc 17439957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 348 - 404
Target Start/End: Original strand, 31605825 - 31605881
Alignment:
Q  348 cccacctaaattggcacaagagagaatcgaacttgaaacctcgaggagaagcacact 404  Q
    |||||| ||||||||||  | ||||||||||||||| |||| |||||| ||||||||    
T  31605825 cccacccaaattggcaccggggagaatcgaacttgagaccttgaggaggagcacact 31605881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 332 - 407
Target Start/End: Original strand, 15284 - 15359
Alignment:
Q  332 gaagaagctatattaacccacctaaattggcacaagagagaatcgaacttgaaacctcgaggagaagcacactccc 407  Q
    |||||||||| |||| ||||||||||||||||   ||||||||||||| ||| ||||||||||| |||||||||||    
T  15284 gaagaagctaaattagcccacctaaattggcatccgagagaatcgaacctgagacctcgaggaggagcacactccc 15359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 44; Significance: 6e-16; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 332 - 407
Target Start/End: Original strand, 1056646 - 1056721
Alignment:
Q  332 gaagaagctatattaacccacctaaattggcacaagagagaatcgaacttgaaacctcgaggagaagcacactccc 407  Q
    |||||||||| |||||||||||||| ||||||| |||||||||||||||| |||||| |||||  |||| ||||||    
T  1056646 gaagaagctaaattaacccacctaacttggcaccagagagaatcgaacttaaaaccttgaggatgagcatactccc 1056721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 332 - 407
Target Start/End: Original strand, 12188264 - 12188339
Alignment:
Q  332 gaagaagctatattaacccacctaaattggcacaagagagaatcgaacttgaaacctcgaggagaagcacactccc 407  Q
    |||||||||| | |||||| |  |||||||||| ||||||||||||||||||||||| |||||| |||||||||||    
T  12188264 gaagaagctaaactaaccccctcaaattggcactagagagaatcgaacttgaaaccttgaggaggagcacactccc 12188339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 332 - 407
Target Start/End: Original strand, 6758383 - 6758458
Alignment:
Q  332 gaagaagctatattaacccacctaaattggcacaagagagaatcgaacttgaaacctcgaggagaagcacactccc 407  Q
    |||||||||| |||  ||||||||||||| ||| |||||||||||| ||||| ||||||||| | |||||||||||    
T  6758383 gaagaagctaaatttgcccacctaaattgacaccagagagaatcgatcttgagacctcgaggtggagcacactccc 6758458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 332 - 407
Target Start/End: Complemental strand, 21418585 - 21418510
Alignment:
Q  332 gaagaagctatattaacccacctaaattggcacaagagagaatcgaacttgaaacctcgaggagaagcacactccc 407  Q
    |||||||||| |||| ||||||| ||||||||| || ||||||||||||||| || | |||||| |||||||||||    
T  21418585 gaagaagctaaattagcccaccttaattggcactagggagaatcgaacttgagacatggaggaggagcacactccc 21418510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 333 - 407
Target Start/End: Complemental strand, 3715566 - 3715492
Alignment:
Q  333 aagaagctatattaacccacctaaattggcacaagagagaatcgaacttgaaacctcgaggagaagcacactccc 407  Q
    ||||||||| || | ||||||||||||| |||  ||||||||||||||||| ||||||| |||||||| ||||||    
T  3715566 aagaagctaaatcagcccacctaaattgacactggagagaatcgaacttgagacctcgacgagaagcatactccc 3715492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 333 - 407
Target Start/End: Complemental strand, 33549218 - 33549144
Alignment:
Q  333 aagaagctatattaacccacctaaattggcacaagagagaatcgaacttgaaacctcgaggagaagcacactccc 407  Q
    ||||||||| |||| | ||||||||||||||   ||||||||||||| ||| ||||||||||| |||||||||||    
T  33549218 aagaagctaaattagctcacctaaattggcatccgagagaatcgaacctgagacctcgaggaggagcacactccc 33549144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 335 - 407
Target Start/End: Complemental strand, 30127512 - 30127440
Alignment:
Q  335 gaagctatattaacccacctaaattggcacaagagagaatcgaacttgaaacctcgaggagaagcacactccc 407  Q
    ||||||| ||||||| ||||||||||||||  || |||||||||| ||| ||||||| ||| |||||||||||    
T  30127512 gaagctaaattaacctacctaaattggcaccggaaagaatcgaacctgagacctcgaagaggagcacactccc 30127440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 350 - 407
Target Start/End: Complemental strand, 16405182 - 16405125
Alignment:
Q  350 cacctaaattggcacaagagagaatcgaacttgaaacctcgaggagaagcacactccc 407  Q
    ||||||||||| |||| | ||||||||||  ||| |||||||||||||||||||||||    
T  16405182 cacctaaattgacacaggtgagaatcgaaactgagacctcgaggagaagcacactccc 16405125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 333 - 405
Target Start/End: Complemental strand, 9583479 - 9583408
Alignment:
Q  333 aagaagctatattaacccacctaaattggcacaagagagaatcgaacttgaaacctcgaggagaagcacactc 405  Q
    ||||||||| | ||||||||| |||||||||| ||||||||||||||| || |||| || ||| |||||||||    
T  9583479 aagaagctaaactaacccaccgaaattggcaccagagagaatcgaactggagaccttga-gaggagcacactc 9583408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 332 - 388
Target Start/End: Original strand, 24256783 - 24256839
Alignment:
Q  332 gaagaagctatattaacccacctaaattggcacaagagagaatcgaacttgaaacct 388  Q
    |||||||||| | ||||| |||||||||| ||| |||||||||||||||||| ||||    
T  24256783 gaagaagctaaactaacctacctaaattgacaccagagagaatcgaacttgagacct 24256839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 348 - 407
Target Start/End: Original strand, 13227135 - 13227194
Alignment:
Q  348 cccacctaaattggcacaagagagaatcgaacttgaaacctcgaggagaagcacactccc 407  Q
    |||||||||| || || | ||||||||||||||||| || |||||||| |||||||||||    
T  13227135 cccacctaaactgacatatgagagaatcgaacttgagacttcgaggaggagcacactccc 13227194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 332 - 407
Target Start/End: Original strand, 18562599 - 18562674
Alignment:
Q  332 gaagaagctatattaacccacctaaattggcacaagagagaatcgaacttgaaacctcgaggagaagcacactccc 407  Q
    |||||||||| |||| |||||||||||||| ||  | ||||||| ||| ||||| ||| ||||| |||||||||||    
T  18562599 gaagaagctaaattagcccacctaaattggtacttgggagaatcaaacctgaaatctcaaggaggagcacactccc 18562674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 332 - 407
Target Start/End: Complemental strand, 20213156 - 20213081
Alignment:
Q  332 gaagaagctatattaacccacctaaattggcacaagagagaatcgaacttgaaacctcgaggagaagcacactccc 407  Q
    |||||||||| |||| |||||| |||||| ||| |||| ||||||||| ||| || | |||||| |||||||||||    
T  20213156 gaagaagctaaattagcccacccaaattgacactagagggaatcgaacctgagacattgaggaggagcacactccc 20213081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 332 - 407
Target Start/End: Complemental strand, 22107179 - 22107104
Alignment:
Q  332 gaagaagctatattaacccacctaaattggcacaagagagaatcgaacttgaaacctcgaggagaagcacactccc 407  Q
    |||||||||| |||| |||||| |||||| ||| |||| ||||||||| ||| || | |||||| |||||||||||    
T  22107179 gaagaagctaaattagcccacccaaattgacactagagggaatcgaacctgagacattgaggaggagcacactccc 22107104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 332 - 407
Target Start/End: Original strand, 24641151 - 24641226
Alignment:
Q  332 gaagaagctatattaacccacctaaattggcacaagagagaatcgaacttgaaacctcgaggagaagcacactccc 407  Q
    ||||||| || |||| ||||||||||||||||     ||||||||||| | ||||||||||||| |||||||||||    
T  24641151 gaagaagttaaattagcccacctaaattggcagtgaggagaatcgaaccttaaacctcgaggaggagcacactccc 24641226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 333 - 407
Target Start/End: Original strand, 12234469 - 12234543
Alignment:
Q  333 aagaagctatattaacccacctaaattggcacaagagagaatcgaacttgaaacctcgaggagaagcacactccc 407  Q
    ||||||||| |||| |||| |||||||| |||  ||||||||||||| ||| ||||||||  | |||||||||||    
T  12234469 aagaagctaaattatcccatctaaattgacactggagagaatcgaacctgagacctcgagagggagcacactccc 12234543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 369 - 406
Target Start/End: Complemental strand, 346608 - 346571
Alignment:
Q  369 gagaatcgaacttgaaacctcgaggagaagcacactcc 406  Q
    ||||||||||| ||| ||||||||||||||||||||||    
T  346608 gagaatcgaacatgagacctcgaggagaagcacactcc 346571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 332 - 397
Target Start/End: Complemental strand, 18263955 - 18263890
Alignment:
Q  332 gaagaagctatattaacccacctaaattggcacaagagagaatcgaacttgaaacctcgaggagaa 397  Q
    |||||||||| |||| |||||||||||||||||  | ||||||||||| ||  ||||| |||||||    
T  18263955 gaagaagctaaattagcccacctaaattggcactggggagaatcgaacctgggacctcaaggagaa 18263890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 353 - 406
Target Start/End: Complemental strand, 28841508 - 28841455
Alignment:
Q  353 ctaaattggcacaagagagaatcgaacttgaaacctcgaggagaagcacactcc 406  Q
    |||||||| |||  ||||||||||||||||| |||| |||||| ||||||||||    
T  28841508 ctaaattgacaccggagagaatcgaacttgagaccttgaggaggagcacactcc 28841455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 31)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 332 - 406
Target Start/End: Original strand, 7949415 - 7949489
Alignment:
Q  332 gaagaagctatattaacccacctaaattggcacaagagagaatcgaacttgaaacctcgaggagaagcacactcc 406  Q
    |||||||||| |||| ||||||||||||| ||| |||||||||||||| ||| |||| |||||| ||||||||||    
T  7949415 gaagaagctaaattagcccacctaaattgacaccagagagaatcgaacctgagaccttgaggaggagcacactcc 7949489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 332 - 407
Target Start/End: Original strand, 8030165 - 8030240
Alignment:
Q  332 gaagaagctatattaacccacctaaattggcacaagagagaatcgaacttgaaacctcgaggagaagcacactccc 407  Q
    |||||||||| |||| |||||| |||||| ||| |||| ||||||||||||| |||| |||||| |||||||||||    
T  8030165 gaagaagctaaattagcccacccaaattgacactagagggaatcgaacttgagaccttgaggaggagcacactccc 8030240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 336 - 407
Target Start/End: Complemental strand, 13015538 - 13015467
Alignment:
Q  336 aagctatattaacccacctaaattggcacaagagagaatcgaacttgaaacctcgaggagaagcacactccc 407  Q
    |||||| |||||||||||||||||| |||  ||||||||||||| ||| || |||||||| |||||||||||    
T  13015538 aagctaaattaacccacctaaattgacacctgagagaatcgaacatgagacttcgaggaggagcacactccc 13015467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 332 - 407
Target Start/End: Complemental strand, 28635811 - 28635736
Alignment:
Q  332 gaagaagctatattaacccacctaaattggcacaagagagaatcgaacttgaaacctcgaggagaagcacactccc 407  Q
    |||||||||| |||| |||||| |||||||||| |||||||||||||| | | ||||| ||||| |||||||||||    
T  28635811 gaagaagctaaattagcccacccaaattggcaccagagagaatcgaacctaagacctccaggaggagcacactccc 28635736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 336 - 407
Target Start/End: Complemental strand, 39509181 - 39509110
Alignment:
Q  336 aagctatattaacccacctaaattggcacaagagagaatcgaacttgaaacctcgaggagaagcacactccc 407  Q
    |||||| |||||||||||||||||| |||  | ||||||||||| ||| ||||||||||| |||||||||||    
T  39509181 aagctaaattaacccacctaaattgccactggggagaatcgaacctgagacctcgaggaggagcacactccc 39509110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 332 - 406
Target Start/End: Original strand, 30938180 - 30938254
Alignment:
Q  332 gaagaagctatattaacccacctaaattggcacaagagagaatcgaacttgaaacctcgaggagaagcacactcc 406  Q
    |||||||||| | |||||||||||||||||||   | ||||||||||| ||| ||||||||||| ||||||||||    
T  30938180 gaagaagctaaactaacccacctaaattggcattggggagaatcgaacctgagacctcgaggaggagcacactcc 30938254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 332 - 381
Target Start/End: Original strand, 12793872 - 12793921
Alignment:
Q  332 gaagaagctatattaacccacctaaattggcacaagagagaatcgaactt 381  Q
    |||||||||| |||| ||||||||||||||||| ||||||||||||||||    
T  12793872 gaagaagctaaattagcccacctaaattggcaccagagagaatcgaactt 12793921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 332 - 407
Target Start/End: Original strand, 37274420 - 37274495
Alignment:
Q  332 gaagaagctatattaacccacctaaattggcacaagagagaatcgaacttgaaacctcgaggagaagcacactccc 407  Q
    |||||||||| |||| ||||| |||||| |||| |||||||||||||| | | |||| |||||| |||||||||||    
T  37274420 gaagaagctaaattagcccacttaaattagcaccagagagaatcgaacctaagaccttgaggaggagcacactccc 37274495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 129 - 183
Target Start/End: Original strand, 17848916 - 17848970
Alignment:
Q  129 atcatatgaacattcacttaaagctacaaattaagaatattacaaatcctactgc 183  Q
    |||||||||||||||| ||| ||||||||||| ||||||||||||| | ||||||    
T  17848916 atcatatgaacattcatttacagctacaaattcagaatattacaaagcttactgc 17848970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 333 - 407
Target Start/End: Original strand, 21660106 - 21660180
Alignment:
Q  333 aagaagctatattaacccacctaaattggcacaagagagaatcgaacttgaaacctcgaggagaagcacactccc 407  Q
    ||||||||| ||||  | |||||||||| ||| ||||| |||||||||||| ||||||||||  |||||||||||    
T  21660106 aagaagctaaattagtctacctaaattgacactagagataatcgaacttgagacctcgaggaagagcacactccc 21660180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 333 - 407
Target Start/End: Original strand, 21668870 - 21668944
Alignment:
Q  333 aagaagctatattaacccacctaaattggcacaagagagaatcgaacttgaaacctcgaggagaagcacactccc 407  Q
    ||||||||| ||||  | |||||||||| ||| ||||| |||||||||||| ||||||||||  |||||||||||    
T  21668870 aagaagctaaattagtctacctaaattgacactagagataatcgaacttgagacctcgaggaagagcacactccc 21668944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 333 - 395
Target Start/End: Complemental strand, 37443813 - 37443751
Alignment:
Q  333 aagaagctatattaacccacctaaattggcacaagagagaatcgaacttgaaacctcgaggag 395  Q
    ||||| ||| |||| ||||| ||||||||||| ||||| |||||||| |||||||||||||||    
T  37443813 aagaaactaaattagcccacataaattggcaccagagataatcgaacatgaaacctcgaggag 37443751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 366 - 407
Target Start/End: Complemental strand, 12798765 - 12798724
Alignment:
Q  366 agagagaatcgaacttgaaacctcgaggagaagcacactccc 407  Q
    |||||||||||||| ||||||||||||||| |||||||||||    
T  12798765 agagagaatcgaacctgaaacctcgaggagcagcacactccc 12798724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 332 - 405
Target Start/End: Original strand, 47386752 - 47386825
Alignment:
Q  332 gaagaagctatattaacccacctaaattggcacaagagagaatcgaacttgaaacctcgaggagaagcacactc 405  Q
    |||||||||| |||| ||||||||||||| ||| ||||||||| |||| ||| ||||| || |||||| |||||    
T  47386752 gaagaagctaaattagcccacctaaattgacactagagagaattgaacctgagacctcaagaagaagcgcactc 47386825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 355 - 407
Target Start/End: Complemental strand, 23378048 - 23377996
Alignment:
Q  355 aaattggcacaagagagaatcgaacttgaaacctcgaggagaagcacactccc 407  Q
    |||||||||| |||||||||||||| ||| |||| |||||| |||||||||||    
T  23378048 aaattggcactagagagaatcgaacctgagaccttgaggaggagcacactccc 23377996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 355 - 407
Target Start/End: Original strand, 37109335 - 37109387
Alignment:
Q  355 aaattggcacaagagagaatcgaacttgaaacctcgaggagaagcacactccc 407  Q
    |||||||||| |||||||||||||| ||| |||| |||||| |||||||||||    
T  37109335 aaattggcaccagagagaatcgaacctgagaccttgaggaggagcacactccc 37109387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 333 - 405
Target Start/End: Complemental strand, 41683863 - 41683791
Alignment:
Q  333 aagaagctatattaacccacctaaattggcacaagagagaatcgaacttgaaacctcgaggagaagcacactc 405  Q
    ||||| ||| |||||||||||||||||||||| ||| ||||| |||| |||||| | ||| || |||||||||    
T  41683863 aagaaactaaattaacccacctaaattggcactagaaagaattgaacgtgaaactttgagaaggagcacactc 41683791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 332 - 407
Target Start/End: Original strand, 7292759 - 7292834
Alignment:
Q  332 gaagaagctatattaacccacctaaattggcacaagagagaatcgaacttgaaacctcgaggagaagcacactccc 407  Q
    |||||||||| | |||||| |  |||||||||| |||||||||||||| ||| || | |||||| |||||||||||    
T  7292759 gaagaagctaaactaaccccctcaaattggcactagagagaatcgaacctgagactttgaggaggagcacactccc 7292834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 336 - 407
Target Start/End: Original strand, 9936926 - 9936997
Alignment:
Q  336 aagctatattaacccacctaaattggcacaagagagaatcgaacttgaaacctcgaggagaagcacactccc 407  Q
    |||||| ||||||||||| |||||| ||   | ||||||||||| |||||| |||||||| |||||||||||    
T  9936926 aagctaaattaacccacccaaattgacaacggtgagaatcgaacctgaaacttcgaggaggagcacactccc 9936997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 332 - 407
Target Start/End: Complemental strand, 13901857 - 13901782
Alignment:
Q  332 gaagaagctatattaacccacctaaattggcacaagagagaatcgaacttgaaacctcgaggagaagcacactccc 407  Q
    |||||||||| |||||||||||||||||  ||  ||| ||||| |||||||| ||||| ||||| | |||||||||    
T  13901857 gaagaagctaaattaacccacctaaattaacattagatagaattgaacttgagacctcaaggaggaacacactccc 13901782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 332 - 407
Target Start/End: Complemental strand, 38869883 - 38869808
Alignment:
Q  332 gaagaagctatattaacccacctaaattggcacaagagagaatcgaacttgaaacctcgaggagaagcacactccc 407  Q
    |||||||||| | |||||| |  |||||||||| |||| ||||||||| ||| |||| |||||| |||||||||||    
T  38869883 gaagaagctaaactaaccccctcaaattggcaccagagggaatcgaacctgagaccttgaggaggagcacactccc 38869808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 353 - 407
Target Start/End: Original strand, 2622377 - 2622431
Alignment:
Q  353 ctaaattggcacaagagagaatcgaacttgaaacctcgaggagaagcacactccc 407  Q
    |||||||||||| |||||||||||||| ||| || | |||||| |||||||||||    
T  2622377 ctaaattggcaccagagagaatcgaacctgagacatggaggaggagcacactccc 2622431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 343 - 405
Target Start/End: Complemental strand, 4185197 - 4185135
Alignment:
Q  343 attaacccacctaaattggcacaagagagaatcgaacttgaaacctcgaggagaagcacactc 405  Q
    |||| ||||||||||||| ||| || ||||||||| ||||| ||||||||||| | |||||||    
T  4185197 attagcccacctaaattgacactagggagaatcgatcttgagacctcgaggaggatcacactc 4185135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 336 - 378
Target Start/End: Original strand, 29312229 - 29312271
Alignment:
Q  336 aagctatattaacccacctaaattggcacaagagagaatcgaa 378  Q
    |||||| |||| ||||||||||||||||| |||||||||||||    
T  29312229 aagctaaattagcccacctaaattggcaccagagagaatcgaa 29312271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 333 - 407
Target Start/End: Original strand, 51250484 - 51250558
Alignment:
Q  333 aagaagctatattaacccacctaaattggcacaagagagaatcgaacttgaaacctcgaggagaagcacactccc 407  Q
    ||||||||| |||| |||||| ||||||||||  ||| ||||||||||||| | || |||| | |||||||||||    
T  51250484 aagaagctaaattagcccacccaaattggcaccggagggaatcgaacttgagatcttgaggcggagcacactccc 51250558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 333 - 406
Target Start/End: Original strand, 19531964 - 19532037
Alignment:
Q  333 aagaagctatattaacccacctaaattggcacaagagagaatcgaacttgaaacctcgaggagaagcacactcc 406  Q
    |||| |||| |||| ||||||||||||||||  |||||||||||||| ||||| ||  ||||| ||||| ||||    
T  19531964 aagatgctaaattagcccacctaaattggcatcagagagaatcgaacctgaaaacttaaggaggagcacgctcc 19532037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 333 - 406
Target Start/End: Complemental strand, 46295211 - 46295138
Alignment:
Q  333 aagaagctatattaacccacctaaattggcacaagagagaatcgaacttgaaacctcgaggagaagcacactcc 406  Q
    ||||||||| | || |||||| ||||||||||  | ||||||||||| ||| |||| |||||| ||||||||||    
T  46295211 aagaagctaaactagcccacccaaattggcaccggggagaatcgaacctgagaccttgaggaggagcacactcc 46295138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 355 - 407
Target Start/End: Complemental strand, 8306577 - 8306525
Alignment:
Q  355 aaattggcacaagagagaatcgaacttgaaacctcgaggagaagcacactccc 407  Q
    |||||| ||| |||||||||||||||| | || |||||||| |||||||||||    
T  8306577 aaattgacactagagagaatcgaacttaagacttcgaggaggagcacactccc 8306525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 333 - 405
Target Start/End: Complemental strand, 31826723 - 31826651
Alignment:
Q  333 aagaagctatattaacccacctaaattggcacaagagagaatcgaacttgaaacctcgaggagaagcacactc 405  Q
    |||||| || |||| |||||| |||||| ||| | || ||||||||||||| |||| |||||| |||||||||    
T  31826723 aagaaggtaaattagcccacccaaattgacactaaagggaatcgaacttgagaccttgaggaggagcacactc 31826651  T

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Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 332 - 364
Target Start/End: Original strand, 49938797 - 49938829
Alignment:
Q  332 gaagaagctatattaacccacctaaattggcac 364  Q
    |||||||||| ||||||||||||||||||||||    
T  49938797 gaagaagctaaattaacccacctaaattggcac 49938829  T

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Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 355 - 407
Target Start/End: Complemental strand, 51969109 - 51969057
Alignment:
Q  355 aaattggcacaagagagaatcgaacttgaaacctcgaggagaagcacactccc 407  Q
    |||||||||| ||||||||  |||| |||||||| |||||| |||||||||||    
T  51969109 aaattggcaccagagagaaatgaacctgaaaccttgaggaggagcacactccc 51969057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 20)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 332 - 406
Target Start/End: Complemental strand, 1435178 - 1435105
Alignment:
Q  332 gaagaagctatattaacccacctaaattggcacaagagagaatcgaacttgaaacctcgaggagaagcacactcc 406  Q
    |||||||||| |||| |||||| |||||| ||| |||||||||||||| ||| |||| |||||||||||||||||    
T  1435178 gaagaagctaaattagcccacccaaattgacaccagagagaatcgaac-tgagaccttgaggagaagcacactcc 1435105  T

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Target: chr2; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 332 - 407
Target Start/End: Original strand, 23052484 - 23052559
Alignment:
Q  332 gaagaagctatattaacccacctaaattggcacaagagagaatcgaacttgaaacctcgaggagaagcacactccc 407  Q
    |||||| ||| |||| |||||| ||| |||||| || ||||||||||| ||| |||| ||||||||||||||||||    
T  23052484 gaagaaactaaattagcccacccaaactggcactagggagaatcgaacctgagaccttgaggagaagcacactccc 23052559  T

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Target: chr2; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 333 - 407
Target Start/End: Complemental strand, 19016145 - 19016071
Alignment:
Q  333 aagaagctatattaacccacctaaattggcacaagagagaatcgaacttgaaacctcgaggagaagcacactccc 407  Q
    ||||||||| |||| || || |||||||||||  | ||||||| ||||||| ||||||||||| |||||||||||    
T  19016145 aagaagctaaattagcctacttaaattggcaccggggagaatcaaacttgagacctcgaggaggagcacactccc 19016071  T

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Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 332 - 405
Target Start/End: Complemental strand, 33582088 - 33582015
Alignment:
Q  332 gaagaagctatattaacccacctaaattggcacaagagagaatcgaacttgaaacctcgaggagaagcacactc 405  Q
    |||||||||| ||||  |||||||||||| ||  |||||||||||||| ||| ||||| ||||| |||||||||    
T  33582088 gaagaagctaaattagtccacctaaattgacattagagagaatcgaacctgagacctcaaggaggagcacactc 33582015  T

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Target: chr2; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 333 - 405
Target Start/End: Original strand, 3677315 - 3677387
Alignment:
Q  333 aagaagctatattaacccacctaaattggcacaagagagaatcgaacttgaaacctcgaggagaagcacactc 405  Q
    ||||||||| |||||| ||| |||||||  ||  ||||||||||||||| | |||||||||||||||| ||||    
T  3677315 aagaagctaaattaactcacttaaattgataccggagagaatcgaacttaagacctcgaggagaagcatactc 3677387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 355 - 407
Target Start/End: Complemental strand, 11062452 - 11062400
Alignment:
Q  355 aaattggcacaagagagaatcgaacttgaaacctcgaggagaagcacactccc 407  Q
    |||||| |||||||||||||| ||| ||| |||| ||||||||||||||||||    
T  11062452 aaattgacacaagagagaatcaaacctgagaccttgaggagaagcacactccc 11062400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 26910732 - 26910696
Alignment:
Q  1 ttatgttactcaaacaagttgccaatatttagaacca 37  Q
    |||||||||||||||||||| ||||||||||||||||    
T  26910732 ttatgttactcaaacaagtttccaatatttagaacca 26910696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 332 - 407
Target Start/End: Original strand, 21303955 - 21304030
Alignment:
Q  332 gaagaagctatattaacccacctaaattggcacaagagagaatcgaacttgaaacctcgaggagaagcacactccc 407  Q
    |||||||||| |||||||| |  |||||| ||| |||||||||||||| ||||||||  ||||| |||| ||||||    
T  21303955 gaagaagctaaattaaccccctcaaattgacaccagagagaatcgaacctgaaaccttcaggaggagcatactccc 21304030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 332 - 407
Target Start/End: Complemental strand, 25637266 - 25637191
Alignment:
Q  332 gaagaagctatattaacccacctaaattggcacaagagagaatcgaacttgaaacctcgaggagaagcacactccc 407  Q
    ||||||| || |||| ||||||||||||||||   ||||||| ||||| ||| |||||||| || |||||||||||    
T  25637266 gaagaagttaaattagcccacctaaattggcatcggagagaaccgaacctgagacctcgagaaggagcacactccc 25637191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 336 - 407
Target Start/End: Complemental strand, 39715103 - 39715032
Alignment:
Q  336 aagctatattaacccacctaaattggcacaagagagaatcgaacttgaaacctcgaggagaagcacactccc 407  Q
    |||||| |||| ||||||||||||||  |  | ||||||||||| ||| ||||||||||| |||||||||||    
T  39715103 aagctaaattagcccacctaaattggtgctggggagaatcgaacctgagacctcgaggaggagcacactccc 39715032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 333 - 407
Target Start/End: Original strand, 21195638 - 21195712
Alignment:
Q  333 aagaagctatattaacccacctaaattggcacaagagagaatcgaacttgaaacctcgaggagaagcacactccc 407  Q
    ||||||||| |||| |||| | |||||| ||| |||| ||||||||| ||| |||| |||||| |||||||||||    
T  21195638 aagaagctaaattagcccatccaaattgacactagagggaatcgaacctgagaccttgaggaggagcacactccc 21195712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 332 - 406
Target Start/End: Original strand, 41908599 - 41908673
Alignment:
Q  332 gaagaagctatattaacccacctaaattggcacaagagagaatcgaacttgaaacctcgaggagaagcacactcc 406  Q
    |||||||||| | || |||||| ||||||||||  | || |||||||||||| |||| |||||| ||||||||||    
T  41908599 gaagaagctaaactagcccacccaaattggcaccggggataatcgaacttgagaccttgaggaggagcacactcc 41908673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 333 - 407
Target Start/End: Original strand, 42327357 - 42327431
Alignment:
Q  333 aagaagctatattaacccacctaaattggcacaagagagaatcgaacttgaaacctcgaggagaagcacactccc 407  Q
    |||| |||| |||| |||||| ||||||||||   |||||||||||| ||| |||| |||||| |||||||||||    
T  42327357 aagatgctaaattagcccacccaaattggcaccgaagagaatcgaacctgagaccttgaggaggagcacactccc 42327431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 332 - 405
Target Start/End: Original strand, 4060175 - 4060248
Alignment:
Q  332 gaagaagctatattaacccacctaaattggcacaagagagaatcgaacttgaaacctcgaggagaagcacactc 405  Q
    |||||||||| | |||||| |  |||||| ||| |||||||||||||| ||| | || ||||||||||||||||    
T  4060175 gaagaagctaaactaaccccctcaaattgacaccagagagaatcgaacctgagatcttgaggagaagcacactc 4060248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 368 - 405
Target Start/End: Original strand, 7599978 - 7600015
Alignment:
Q  368 agagaatcgaacttgaaacctcgaggagaagcacactc 405  Q
    |||||||||||| ||||||||||||||| |||||||||    
T  7599978 agagaatcgaacatgaaacctcgaggaggagcacactc 7600015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 332 - 405
Target Start/End: Complemental strand, 37480190 - 37480117
Alignment:
Q  332 gaagaagctatattaacccacctaaattggcacaagagagaatcgaacttgaaacctcgaggagaagcacactc 405  Q
    |||||||||| |||| |||||| ||||||| ||  | ||||||||||| ||| |||| |||||| |||||||||    
T  37480190 gaagaagctaaattagcccacccaaattgggaccggggagaatcgaacctgagaccttgaggaggagcacactc 37480117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 334 - 379
Target Start/End: Complemental strand, 37972008 - 37971963
Alignment:
Q  334 agaagctatattaacccacctaaattggcacaagagagaatcgaac 379  Q
    |||||||| |||| |||||||||||||||||  |||||||||||||    
T  37972008 agaagctaaattagcccacctaaattggcaccggagagaatcgaac 37971963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 332 - 404
Target Start/End: Original strand, 2750587 - 2750659
Alignment:
Q  332 gaagaagctatattaacccacctaaattggcacaagagagaatcgaacttgaaacctcgaggagaagcacact 404  Q
    |||||||||| | |||||| |  |||||||||| |||||||||||||| ||| |||| |||||  ||||||||    
T  2750587 gaagaagctaaactaaccccctcaaattggcactagagagaatcgaacatgagaccttgaggaagagcacact 2750659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 355 - 407
Target Start/End: Complemental strand, 14500369 - 14500317
Alignment:
Q  355 aaattggcacaagagagaatcgaacttgaaacctcgaggagaagcacactccc 407  Q
    |||||||||| |||||||||||||  ||| |||| |||||| |||||||||||    
T  14500369 aaattggcaccagagagaatcgaatctgagacctagaggaggagcacactccc 14500317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 371 - 407
Target Start/End: Complemental strand, 42860424 - 42860388
Alignment:
Q  371 gaatcgaacttgaaacctcgaggagaagcacactccc 407  Q
    ||||||||||||| ||||||||||| |||||||||||    
T  42860424 gaatcgaacttgagacctcgaggaggagcacactccc 42860388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 336 - 407
Target Start/End: Complemental strand, 106159 - 106088
Alignment:
Q  336 aagctatattaacccacctaaattggcacaagagagaatcgaacttgaaacctcgaggagaagcacactccc 407  Q
    |||||| ||||||||||| |||||| || ||||||||||||||||| | || ||||| || |||||||||||    
T  106159 aagctaaattaacccacccaaattgacataagagagaatcgaactttagacttcgagaagcagcacactccc 106088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 333 - 395
Target Start/End: Complemental strand, 12816 - 12754
Alignment:
Q  333 aagaagctatattaacccacctaaattggcacaagagagaatcgaacttgaaacctcgaggag 395  Q
    ||||||||| |||||||||||||||| || ||  ||||||||||||||||| | |||||||||    
T  12816 aagaagctaaattaacccacctaaatcggtaccggagagaatcgaacttgagatctcgaggag 12754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 345 - 406
Target Start/End: Original strand, 45733 - 45794
Alignment:
Q  345 taacccacctaaattggcacaagagagaatcgaacttgaaacctcgaggagaagcacactcc 406  Q
    |||||||||||||||| ||| |||||||||||||| ||| ||||| ||||| | ||||||||    
T  45733 taacccacctaaattgacaccagagagaatcgaacatgagacctcaaggaggaacacactcc 45794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 333 - 405
Target Start/End: Complemental strand, 49420 - 49348
Alignment:
Q  333 aagaagctatattaacccacctaaattggcacaagagagaatcgaacttgaaacctcgaggagaagcacactc 405  Q
    |||||| || |||||||||| ||||||| |||  ||||||||||||| ||| ||||||| ||| |||||||||    
T  49420 aagaagttaaattaacccacttaaattgacaccggagagaatcgaacctgatacctcgaagaggagcacactc 49348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0368 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0368
Description:

Target: scaffold0368; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 333 - 406
Target Start/End: Original strand, 14927 - 15000
Alignment:
Q  333 aagaagctatattaacccacctaaattggcacaagagagaatcgaacttgaaacctcgaggagaagcacactcc 406  Q
    ||||||||| |||| ||||| ||||||| |||  ||||||||| ||  ||| ||||||||||| ||||||||||    
T  14927 aagaagctaaattagcccacttaaattgtcaccggagagaatcaaatatgagacctcgaggaggagcacactcc 15000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0299 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0299
Description:

Target: scaffold0299; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 366 - 407
Target Start/End: Complemental strand, 11609 - 11568
Alignment:
Q  366 agagagaatcgaacttgaaacctcgaggagaagcacactccc 407  Q
    |||||||||||||| ||| ||||||||||| |||||||||||    
T  11609 agagagaatcgaacctgagacctcgaggaggagcacactccc 11568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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