View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11930_low_84 (Length: 330)
Name: NF11930_low_84
Description: NF11930
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11930_low_84 |
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Alignment Details
Target: chr8 (Bit Score: 313; Significance: 1e-176; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 313; E-Value: 1e-176
Query Start/End: Original strand, 1 - 321
Target Start/End: Complemental strand, 10312460 - 10312140
Alignment:
| Q |
1 |
gatgctgctccttaagagatgttttctcttcacatagcttttgcttctttgcactcaaattttggcaagcacagttatcttgttcccaaggcattttcct |
100 |
Q |
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| T |
10312460 |
gatgctgctccttaagagatgttttctcttcacatagcttttgcttctttgcactcaaattttggcaagcacagttatcttgttcccaaggcattttcct |
10312361 |
T |
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| Q |
101 |
tgttccattgcaggtcatgatagccttaaggcatgacttaaatacggtgaaacatgatttttggtcatcaaacacatgttggctatatgaaccaatgtat |
200 |
Q |
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| T |
10312360 |
tgttccgttgcaggtcatgatagccttaaggcatgacttaaatacggtgaaacatgatttttggtcatcaaacacatgttggctatatgaaccaatgtat |
10312261 |
T |
|
| Q |
201 |
ttaattttattcaaaggcgataagacgaaacaagatggttttatgtcttccaagacaaatccttgagagtgtgcaaaatcaaccaattccaaaatctgtt |
300 |
Q |
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| T |
10312260 |
ttaattttattcaaaggcgataagacgaaacaagatggttttatgtcttccaagacaaatccttgagagtgtgcaaaatcaaccaattccaaaatctgtt |
10312161 |
T |
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| Q |
301 |
taaatatatacagcctctctg |
321 |
Q |
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|||||||||||||||| |||| |
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| T |
10312160 |
taaatatatacagcctttctg |
10312140 |
T |
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