View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11930_low_95 (Length: 294)
Name: NF11930_low_95
Description: NF11930
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11930_low_95 |
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Alignment Details
Target: chr7 (Bit Score: 237; Significance: 1e-131; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 19 - 283
Target Start/End: Original strand, 48170332 - 48170596
Alignment:
| Q |
19 |
agaatgacagtagaatagaaaggcaaggcaactttctgcacgcaaaacagaacaacatctaccaaaaaacgaagatcaagcccataattatatttatgat |
118 |
Q |
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| T |
48170332 |
agaatgacagtagaatagaaaggcaaggcaactttctgcacgcaaaacagaacaacatctaccaaaaaacgaagatcaagcccataattatatttatgat |
48170431 |
T |
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| Q |
119 |
tcgtgaaattagcctcataaatgaagaagaaacagcaacgagttaacnnnnnnnnttaactggagctcattgcagaagagtccagatggatattcacatc |
218 |
Q |
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| T |
48170432 |
tcgtgaaattagcctcataaatgaagaagaaacagcaatgagttaacaaaaaaaattaactggagctcattgcagaagagtccagatggatattcacatc |
48170531 |
T |
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| Q |
219 |
attaaaattacctccacagtgaaataatccttaagatacacgtctcatgctacttatttcttcat |
283 |
Q |
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| T |
48170532 |
attaaaattacctccacagtgaaataatccttaagatacacgtctcatgctacttatttcttcat |
48170596 |
T |
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