View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11931_high_12 (Length: 210)

Name: NF11931_high_12
Description: NF11931
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11931_high_12
NF11931_high_12
[»] chr4 (24 HSPs)
chr4 (13-171)||(15227401-15227559)
chr4 (19-165)||(1899794-1899940)
chr4 (12-171)||(15285510-15285669)
chr4 (12-158)||(14236123-14236269)
chr4 (12-167)||(14664545-14664700)
chr4 (55-158)||(15391931-15392034)
chr4 (12-167)||(17013527-17013682)
chr4 (12-167)||(24592900-24593055)
chr4 (22-167)||(24112202-24112347)
chr4 (12-167)||(34189546-34189701)
chr4 (22-167)||(14763893-14764038)
chr4 (168-210)||(1899978-1900020)
chr4 (22-167)||(36345101-36345246)
chr4 (25-167)||(6569393-6569535)
chr4 (22-167)||(5005407-5005552)
chr4 (22-167)||(19372798-19372943)
chr4 (13-167)||(39850151-39850305)
chr4 (168-210)||(14664736-14664778)
chr4 (168-210)||(15285436-15285478)
chr4 (168-210)||(17013718-17013760)
chr4 (22-167)||(14098078-14098223)
chr4 (22-167)||(30753279-30753424)
chr4 (22-167)||(40106227-40106372)
chr4 (22-167)||(54832927-54833072)
[»] chr7 (29 HSPs)
chr7 (12-171)||(16450466-16450625)
chr7 (13-171)||(16040840-16040998)
chr7 (12-167)||(16518891-16519046)
chr7 (12-167)||(16503855-16504010)
chr7 (12-167)||(2154086-2154241)
chr7 (12-167)||(5127505-5127660)
chr7 (12-167)||(11425251-11425406)
chr7 (12-167)||(10917340-10917495)
chr7 (22-149)||(5120983-5121110)
chr7 (22-167)||(16736935-16737080)
chr7 (22-167)||(16751989-16752134)
chr7 (22-167)||(17523055-17523200)
chr7 (22-167)||(17530015-17530160)
chr7 (22-167)||(31124434-31124579)
chr7 (22-167)||(22143183-22143328)
chr7 (22-167)||(26434780-26434925)
chr7 (22-167)||(26538348-26538493)
chr7 (168-210)||(16041030-16041072)
chr7 (168-210)||(16450392-16450434)
chr7 (22-167)||(5147815-5147960)
chr7 (22-167)||(26486219-26486364)
chr7 (22-167)||(45386866-45387011)
chr7 (170-210)||(16518813-16518853)
chr7 (168-210)||(2154277-2154319)
chr7 (168-210)||(10917262-10917304)
chr7 (13-167)||(31564874-31565028)
chr7 (22-167)||(4145598-4145743)
chr7 (22-167)||(11441083-11441228)
chr7 (170-210)||(16503777-16503817)
[»] chr3 (50 HSPs)
chr3 (12-171)||(18529870-18530029)
chr3 (12-171)||(16627128-16627287)
chr3 (12-167)||(8295448-8295603)
chr3 (12-167)||(8301894-8302049)
chr3 (12-167)||(15893336-15893491)
chr3 (12-167)||(15741712-15741867)
chr3 (12-167)||(18050735-18050890)
chr3 (12-167)||(35880239-35880394)
chr3 (12-167)||(29149385-29149540)
chr3 (13-167)||(6191790-6191944)
chr3 (13-167)||(18330148-18330302)
chr3 (12-167)||(4797283-4797438)
chr3 (13-167)||(4721105-4721259)
chr3 (22-167)||(22388205-22388350)
chr3 (22-167)||(4892696-4892841)
chr3 (22-167)||(7072695-7072840)
chr3 (22-167)||(18277682-18277827)
chr3 (22-167)||(18292983-18293128)
chr3 (22-167)||(18308284-18308429)
chr3 (22-167)||(32438640-32438785)
chr3 (168-210)||(18530061-18530103)
chr3 (22-167)||(5466468-5466613)
chr3 (22-167)||(8211224-8211369)
chr3 (22-167)||(11110991-11111136)
chr3 (22-167)||(18242210-18242355)
chr3 (22-167)||(28020761-28020906)
chr3 (22-167)||(28116587-28116732)
chr3 (22-167)||(29665615-29665760)
chr3 (168-210)||(16627054-16627096)
chr3 (22-167)||(5609952-5610097)
chr3 (22-167)||(10395619-10395764)
chr3 (22-167)||(21674176-21674321)
chr3 (22-167)||(22871504-22871649)
chr3 (22-167)||(22886563-22886708)
chr3 (22-167)||(28338785-28338930)
chr3 (22-167)||(47022936-47023081)
chr3 (22-167)||(50134701-50134846)
chr3 (16-167)||(4347314-4347465)
chr3 (168-210)||(4797205-4797247)
chr3 (168-210)||(8295639-8295681)
chr3 (168-210)||(18050926-18050968)
chr3 (22-167)||(6543104-6543249)
chr3 (22-167)||(20577492-20577637)
chr3 (22-167)||(31965103-31965248)
chr3 (22-167)||(36997719-36997864)
chr3 (22-167)||(48465398-48465543)
chr3 (22-167)||(51781494-51781639)
chr3 (22-167)||(51796581-51796726)
chr3 (168-204)||(15741640-15741676)
chr3 (168-204)||(15893264-15893300)
[»] chr2 (30 HSPs)
chr2 (12-171)||(21703735-21703894)
chr2 (12-171)||(19456992-19457151)
chr2 (12-158)||(27392501-27392647)
chr2 (12-167)||(20837426-20837581)
chr2 (12-167)||(28881722-28881877)
chr2 (12-167)||(23129144-23129299)
chr2 (21-167)||(27435022-27435168)
chr2 (12-167)||(12655050-12655205)
chr2 (22-167)||(37374679-37374824)
chr2 (168-210)||(21703661-21703703)
chr2 (22-167)||(261343-261488)
chr2 (22-167)||(27816492-27816637)
chr2 (22-167)||(34278967-34279112)
chr2 (22-167)||(39052406-39052551)
chr2 (168-210)||(19456918-19456960)
chr2 (22-167)||(11635767-11635912)
chr2 (22-167)||(11641956-11642101)
chr2 (22-167)||(13937122-13937267)
chr2 (22-167)||(22926606-22926751)
chr2 (22-167)||(27776725-27776870)
chr2 (22-167)||(27803210-27803355)
chr2 (22-167)||(34285872-34286017)
chr2 (22-167)||(34290932-34291077)
chr2 (22-167)||(40233017-40233162)
chr2 (168-210)||(23129066-23129108)
chr2 (168-210)||(28881913-28881955)
chr2 (22-167)||(9350572-9350717)
chr2 (22-167)||(12586319-12586464)
chr2 (22-167)||(21677760-21677905)
chr2 (170-210)||(27434944-27434984)
[»] chr5 (34 HSPs)
chr5 (12-163)||(25198553-25198704)
chr5 (12-167)||(23891727-23891882)
chr5 (12-167)||(24951631-24951786)
chr5 (12-167)||(24688643-24688798)
chr5 (12-167)||(30934157-30934312)
chr5 (12-167)||(11548875-11549030)
chr5 (12-167)||(23718475-23718629)
chr5 (13-167)||(33777009-33777163)
chr5 (12-167)||(23752936-23753092)
chr5 (12-167)||(22999600-22999755)
chr5 (22-167)||(33292059-33292204)
chr5 (22-167)||(41674240-41674385)
chr5 (22-167)||(9549029-9549174)
chr5 (22-167)||(15659246-15659391)
chr5 (22-167)||(3789057-3789202)
chr5 (22-167)||(28648757-28648902)
chr5 (168-210)||(25198744-25198786)
chr5 (22-167)||(13325330-13325475)
chr5 (22-167)||(31430959-31431104)
chr5 (22-167)||(37671978-37672123)
chr5 (22-167)||(40474038-40474183)
chr5 (22-167)||(43077780-43077925)
chr5 (168-210)||(23891918-23891960)
chr5 (168-210)||(24688565-24688607)
chr5 (168-210)||(24951822-24951864)
chr5 (168-210)||(30934348-30934390)
chr5 (22-167)||(2510582-2510727)
chr5 (22-167)||(6873833-6873978)
chr5 (22-167)||(18501234-18501379)
chr5 (22-167)||(28960284-28960429)
chr5 (22-167)||(31826905-31827050)
chr5 (22-167)||(32599955-32600100)
chr5 (22-167)||(34616052-34616197)
chr5 (22-167)||(37359141-37359286)
[»] scaffold0124 (3 HSPs)
scaffold0124 (20-171)||(19932-20083)
scaffold0124 (12-167)||(29965-30120)
scaffold0124 (168-210)||(20115-20157)
[»] chr1 (4 HSPs)
chr1 (21-171)||(16208610-16208760)
chr1 (13-171)||(20460620-20460778)
chr1 (168-210)||(16208536-16208578)
chr1 (168-210)||(20460810-20460852)
[»] chr6 (36 HSPs)
chr6 (12-171)||(20160216-20160375)
chr6 (12-171)||(22172456-22172615)
chr6 (12-167)||(22935409-22935565)
chr6 (12-167)||(23857854-23858010)
chr6 (12-167)||(13299483-13299638)
chr6 (12-167)||(24863226-24863381)
chr6 (12-167)||(26988510-26988665)
chr6 (12-167)||(15424849-15425004)
chr6 (12-167)||(16749363-16749518)
chr6 (12-167)||(26999582-26999737)
chr6 (12-158)||(24305159-24305305)
chr6 (13-167)||(26917890-26918044)
chr6 (13-170)||(27273112-27273269)
chr6 (22-167)||(4546316-4546461)
chr6 (22-167)||(28206961-28207106)
chr6 (22-167)||(27043909-27044054)
chr6 (22-167)||(29500925-29501070)
chr6 (28-170)||(27630238-27630380)
chr6 (22-167)||(4524808-4524953)
chr6 (22-167)||(4724675-4724820)
chr6 (22-167)||(4757280-4757425)
chr6 (22-167)||(17024781-17024926)
chr6 (22-167)||(29548997-29549142)
chr6 (168-210)||(22935331-22935373)
chr6 (168-210)||(23857776-23857818)
chr6 (168-210)||(24305072-24305114)
chr6 (168-210)||(24863417-24863459)
chr6 (168-210)||(26999773-26999815)
chr6 (13-167)||(27360542-27360696)
chr6 (13-167)||(27450885-27451039)
chr6 (22-167)||(4772516-4772661)
chr6 (22-167)||(16673646-16673791)
chr6 (22-167)||(26116951-26117096)
chr6 (22-167)||(26778159-26778304)
chr6 (22-167)||(27007231-27007376)
chr6 (22-167)||(34463893-34464038)
[»] scaffold0109 (1 HSPs)
scaffold0109 (19-158)||(21086-21225)
[»] scaffold0089 (5 HSPs)
scaffold0089 (12-167)||(29275-29430)
scaffold0089 (12-167)||(40658-40813)
scaffold0089 (12-167)||(47574-47729)
scaffold0089 (168-210)||(40580-40622)
scaffold0089 (170-210)||(29468-29508)
[»] chr8 (21 HSPs)
chr8 (12-158)||(22081429-22081575)
chr8 (12-167)||(2137807-2137962)
chr8 (12-167)||(14557139-14557294)
chr8 (12-167)||(16277066-16277221)
chr8 (12-167)||(19687610-19687765)
chr8 (20-167)||(16282970-16283116)
chr8 (12-167)||(27609453-27609608)
chr8 (22-167)||(19673960-19674105)
chr8 (22-167)||(12093281-12093426)
chr8 (22-167)||(18710108-18710253)
chr8 (22-167)||(19279034-19279179)
chr8 (22-167)||(19518691-19518836)
chr8 (13-167)||(31354037-31354191)
chr8 (22-167)||(3330067-3330212)
chr8 (168-210)||(2137729-2137771)
chr8 (168-210)||(14557330-14557372)
chr8 (168-210)||(16277257-16277299)
chr8 (168-210)||(16283152-16283194)
chr8 (168-210)||(19687801-19687843)
chr8 (22-167)||(19285987-19286132)
chr8 (22-167)||(29828835-29828980)
[»] scaffold0029 (1 HSPs)
scaffold0029 (12-167)||(719-874)
[»] scaffold0143 (2 HSPs)
scaffold0143 (12-167)||(26804-26959)
scaffold0143 (168-210)||(26995-27037)
[»] scaffold0038 (1 HSPs)
scaffold0038 (22-167)||(7459-7604)
[»] scaffold0099 (1 HSPs)
scaffold0099 (91-167)||(48744-48822)
[»] scaffold0336 (1 HSPs)
scaffold0336 (22-167)||(7754-7899)
[»] scaffold0144 (1 HSPs)
scaffold0144 (22-167)||(26791-26936)


Alignment Details
Target: chr4 (Bit Score: 143; Significance: 3e-75; HSPs: 24)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 13 - 171
Target Start/End: Original strand, 15227401 - 15227559
Alignment:
Q  13 agatgaaggggggcagctgcccgcatcactcccgatcttgacgaagaggagatgactcagacattcctgaagactctgaaaaaggattatatcgaaagaa 112  Q
    ||||| |||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  15227401 agatggaggggggcagctgcccgcatcactcccactcttgacgaagaggagatgactcagacattcctgaagactctgaaaaaggattatgtcgaaagaa 15227500  T
Q  113 tgatcattgctgctccaaataacttctctgagatggtcaccatggggactcgtctagaa 171  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15227501 tgatcattgctgctccaaataacttctctgagatggtcaccatggggactcgtctagaa 15227559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 19 - 165
Target Start/End: Original strand, 1899794 - 1899940
Alignment:
Q  19 aggggggcagctgcccgcatcactcccgatcttgacgaagaggagatgactcagacattcctgaagactctgaaaaaggattatatcgaaagaatgatca 118  Q
    |||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  1899794 aggggggcagctgcccgcatcactcccgctcttgatgaagaggagatgactcagacattcctgaagactctgaaaaaggattatgtcgaaagaatgatca 1899893  T
Q  119 ttgctgctccaaataacttctctgagatggtcaccatggggactcgt 165  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||    
T  1899894 ttgctgctccaaataacttctttgagatggtcaccatggggactcgt 1899940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 12 - 171
Target Start/End: Complemental strand, 15285669 - 15285510
Alignment:
Q  12 gagatgaaggggggcagctgcccgcatcactcccgatcttgacgaagaggagatgactcagacattcctgaagactctgaaaaaggattatatcgaaaga 111  Q
    |||||| |||||||||||||||||||||||||||| |||||||||||||||||  |||||||||||| |||| |||||||||||||||||| ||||||||    
T  15285669 gagatggaggggggcagctgcccgcatcactcccgctcttgacgaagaggagactactcagacattcatgaaaactctgaaaaaggattatgtcgaaaga 15285570  T
Q  112 atgatcattgctgctccaaataacttctctgagatggtcaccatggggactcgtctagaa 171  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||    
T  15285569 atgatcattgctgctccaaataacttctctaagatggtcaccatggggactcgcctagaa 15285510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 12 - 158
Target Start/End: Complemental strand, 14236269 - 14236123
Alignment:
Q  12 gagatgaaggggggcagctgcccgcatcactcccgatcttgacgaagaggagatgactcagacattcctgaagactctgaaaaaggattatatcgaaaga 111  Q
    |||||| ||||||||||||||||| || || || | |||||| ||||||||||||||||||||||||||||| ||| |||| ||||||||| ||||||||    
T  14236269 gagatggaggggggcagctgcccgtattacccctgctcttgatgaagaggagatgactcagacattcctgaaaactttgaagaaggattatgtcgaaaga 14236170  T
Q  112 atgatcattgctgctccaaataacttctctgagatggtcaccatggg 158  Q
    ||||||||| ||||||| | |||||||||||||||||||||||||||    
T  14236169 atgatcattactgctccgagtaacttctctgagatggtcaccatggg 14236123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 12 - 167
Target Start/End: Original strand, 14664545 - 14664700
Alignment:
Q  12 gagatgaaggggggcagctgcccgcatcactcccgatcttgacgaagaggagatgactcagacattcctgaagactctgaaaaaggattatatcgaaaga 111  Q
    |||||| |||||||||||||||||||| ||||||| |||||| ||||| || ||||| ||||||||| | |||||  |||||||||||||| | || |||    
T  14664545 gagatggaggggggcagctgcccgcattactcccgctcttgatgaagaagaaatgacccagacattcttaaagaccttgaaaaaggattatgttgagaga 14664644  T
Q  112 atgatcattgctgctccaaataacttctctgagatggtcaccatggggactcgtct 167  Q
    |||||||||||||| || |||||||| || ||||||||||||||||| ||||||||    
T  14664645 atgatcattgctgccccgaataacttttcggagatggtcaccatgggaactcgtct 14664700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 55 - 158
Target Start/End: Complemental strand, 15392034 - 15391931
Alignment:
Q  55 gaagaggagatgactcagacattcctgaagactctgaaaaaggattatatcgaaagaatgatcattgctgctccaaataacttctctgagatggtcacca 154  Q
    ||||||||||| ||||||||||||||||||||||| |||||||||||| |||||||||||||||| |||||||||| | |||||||||||||||||||||    
T  15392034 gaagaggagataactcagacattcctgaagactctaaaaaaggattatgtcgaaagaatgatcatcgctgctccaagtgacttctctgagatggtcacca 15391935  T
Q  155 tggg 158  Q
    ||||    
T  15391934 tggg 15391931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 12 - 167
Target Start/End: Original strand, 17013527 - 17013682
Alignment:
Q  12 gagatgaaggggggcagctgcccgcatcactcccgatcttgacgaagaggagatgactcagacattcctgaagactctgaaaaaggattatatcgaaaga 111  Q
    |||||| |||||||||||||||||||| ||||||| |||||| ||||| || ||||| ||||||||| | |||||  |||| ||||||||| | || |||    
T  17013527 gagatggaggggggcagctgcccgcattactcccgctcttgatgaagaagaaatgacccagacattcttaaagaccttgaagaaggattatgttgagaga 17013626  T
Q  112 atgatcattgctgctccaaataacttctctgagatggtcaccatggggactcgtct 167  Q
    |||||||||||||| || |||||||| || ||||||||||||||||| || |||||    
T  17013627 atgatcattgctgccccgaataacttttcggagatggtcaccatgggaacccgtct 17013682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 12 - 167
Target Start/End: Complemental strand, 24593055 - 24592900
Alignment:
Q  12 gagatgaaggggggcagctgcccgcatcactcccgatcttgacgaagaggagatgactcagacattcctgaagactctgaaaaaggattatatcgaaaga 111  Q
    |||||| ||||||||||||||||| || ||||||| |||||| ||||| || ||||| ||||||||| | |||||  |||| ||||||||| | || |||    
T  24593055 gagatggaggggggcagctgcccgtattactcccgctcttgatgaagaagaaatgacccagacattcttaaagaccttgaagaaggattatgttgagaga 24592956  T
Q  112 atgatcattgctgctccaaataacttctctgagatggtcaccatggggactcgtct 167  Q
    |||||||||||||| || ||||||||||| ||||||||||||||||| || |||||    
T  24592955 atgatcattgctgccccgaataacttctcggagatggtcaccatgggaacccgtct 24592900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 22 - 167
Target Start/End: Original strand, 24112202 - 24112347
Alignment:
Q  22 ggggcagctgcccgcatcactcccgatcttgacgaagaggagatgactcagacattcctgaagactctgaaaaaggattatatcgaaagaatgatcattg 121  Q
    |||||||||||||| |||||||| | | | || |||||||| |||||||||||||| ||||||||||| || | ||||||| | ||||| ||||| || |    
T  24112202 ggggcagctgcccgtatcactcctgctttagatgaagaggaaatgactcagacatttctgaagactctcaagagggattatgttgaaaggatgattatcg 24112301  T
Q  122 ctgctccaaataacttctctgagatggtcaccatggggactcgtct 167  Q
    | || ||||| || ||||| |||||||| |||||||| || |||||    
T  24112302 cagccccaaacaatttctcagagatggttaccatgggaacacgtct 24112347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 12 - 167
Target Start/End: Complemental strand, 34189701 - 34189546
Alignment:
Q  12 gagatgaaggggggcagctgcccgcatcactcccgatcttgacgaagaggagatgactcagacattcctgaagactctgaaaaaggattatatcgaaaga 111  Q
    |||||| ||||||||||||||||| |||||||| | | | || |||||||| ||||| ||||||||| | |||||  |||| ||||||||| | |||||     
T  34189701 gagatggaggggggcagctgcccgtatcactcctgctttagatgaagaggaaatgacccagacattcttaaagaccttgaagaaggattatgttgaaagg 34189602  T
Q  112 atgatcattgctgctccaaataacttctctgagatggtcaccatggggactcgtct 167  Q
    ||||| || || || ||||| || ||||| |||||||| |||||||| || |||||    
T  34189601 atgattatcgcagccccaaacaatttctcagagatggttaccatgggaacacgtct 34189546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 22 - 167
Target Start/End: Complemental strand, 14764038 - 14763893
Alignment:
Q  22 ggggcagctgcccgcatcactcccgatcttgacgaagaggagatgactcagacattcctgaagactctgaaaaaggattatatcgaaagaatgatcattg 121  Q
    |||||||||||||| |||||||| | | | || ||||| || ||||| ||||||||| | |||||  |||| || |||||| | || ||||||||||| |    
T  14764038 ggggcagctgcccgtatcactcctgctttagatgaagaagaaatgacccagacattcttaaagaccttgaagaaagattatgttgagagaatgatcatcg 14763939  T
Q  122 ctgctccaaataacttctctgagatggtcaccatggggactcgtct 167  Q
    |||| ||||| ||||| || ||||||||||||||||| || |||||    
T  14763938 ctgccccaaacaacttttcggagatggtcaccatgggaacccgtct 14763893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 168 - 210
Target Start/End: Original strand, 1899978 - 1900020
Alignment:
Q  168 agaaagttgaatcctctgtaaatgcatcaaagaggtacggtaa 210  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  1899978 agaaagttgaatcctctgtaaatgcatcaaagaggtacggtaa 1900020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 22 - 167
Target Start/End: Complemental strand, 36345246 - 36345101
Alignment:
Q  22 ggggcagctgcccgcatcactcccgatcttgacgaagaggagatgactcagacattcctgaagactctgaaaaaggattatatcgaaagaatgatcattg 121  Q
    |||||||||||||| |||||||| | | | || ||||| || ||||| ||||||||| | |||||  |||| || |||||| | || ||||||||||| |    
T  36345246 ggggcagctgcccgtatcactcctgctttagatgaagaagaaatgacccagacattcttaaagaccttgaagaaagattatgttgagagaatgatcatcg 36345147  T
Q  122 ctgctccaaataacttctctgagatggtcaccatggggactcgtct 167  Q
    |||| || || ||||| || ||||||||||||||||| || |||||    
T  36345146 ctgccccgaacaacttttcggagatggtcaccatgggaacccgtct 36345101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 25 - 167
Target Start/End: Original strand, 6569393 - 6569535
Alignment:
Q  25 gcagctgcccgcatcactcccgatcttgacgaagaggagatgactcagacattcctgaagactctgaaaaaggattatatcgaaagaatgatcattgctg 124  Q
    ||||||||||| |||||||| | | | || ||||| || ||||| ||||||||| | |||||  |||| || |||||| | || ||||||||||| ||||    
T  6569393 gcagctgcccgtatcactcctgctttagatgaagaagaaatgacccagacattcttaaagaccttgaagaaagattatgttgagagaatgatcatcgctg 6569492  T
Q  125 ctccaaataacttctctgagatggtcaccatggggactcgtct 167  Q
    | || || ||||| || ||||||||||||||||| || |||||    
T  6569493 ccccgaacaacttttcggagatggtcaccatgggaacccgtct 6569535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 22 - 167
Target Start/End: Original strand, 5005407 - 5005552
Alignment:
Q  22 ggggcagctgcccgcatcactcccgatcttgacgaagaggagatgactcagacattcctgaagactctgaaaaaggattatatcgaaagaatgatcattg 121  Q
    |||||||||||||| |||||||| | | | || || ||||| ||||| ||||||||| | |||||  |||| || |||||| | || || |||||||| |    
T  5005407 ggggcagctgcccgtatcactcctgctttagatgaggaggaaatgacccagacattcttaaagaccttgaagaaagattatgttgagaggatgatcatcg 5005506  T
Q  122 ctgctccaaataacttctctgagatggtcaccatggggactcgtct 167  Q
    |||| || || ||||| || ||||||||||||||||| || |||||    
T  5005507 ctgccccgaacaacttttcggagatggtcaccatgggaacccgtct 5005552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 22 - 167
Target Start/End: Original strand, 19372798 - 19372943
Alignment:
Q  22 ggggcagctgcccgcatcactcccgatcttgacgaagaggagatgactcagacattcctgaagactctgaaaaaggattatatcgaaagaatgatcattg 121  Q
    |||||||||||||| |||||||| | | | || ||||| || ||||| ||||||||| | |||||  |||| || |||||| | || || |||||||| |    
T  19372798 ggggcagctgcccgtatcactcctgctttagatgaagaagaaatgacccagacattcttaaagaccttgaagaaagattatgttgagaggatgatcatcg 19372897  T
Q  122 ctgctccaaataacttctctgagatggtcaccatggggactcgtct 167  Q
    |||| || || ||||| || ||||||||||||||||| || |||||    
T  19372898 ctgccccgaacaacttttcggagatggtcaccatgggaacccgtct 19372943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 13 - 167
Target Start/End: Original strand, 39850151 - 39850305
Alignment:
Q  13 agatgaaggggggcagctgcccgcatcactcccgatcttgacgaagaggagatgactcagacattcctgaagactctgaaaaaggattatatcgaaagaa 112  Q
    ||||| || |||||||||||||| |||||||| | | | || ||||| || ||||| ||||||||| | |||||  |||| || |||||| | || || |    
T  39850151 agatggagaggggcagctgcccgtatcactcctgctttagatgaagaagaaatgacccagacattcttaaagaccttgaagaaagattatgttgagagga 39850250  T
Q  113 tgatcattgctgctccaaataacttctctgagatggtcaccatggggactcgtct 167  Q
    ||||||| ||||| || || ||||| || ||||||||||| ||||| || |||||    
T  39850251 tgatcatcgctgccccgaacaacttttcggagatggtcactatgggaacccgtct 39850305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 210
Target Start/End: Original strand, 14664736 - 14664778
Alignment:
Q  168 agaaagttgaatcctctgtaaatgcatcaaagaggtacggtaa 210  Q
    |||||| |||||||||||| ||||||||||||||||| |||||    
T  14664736 agaaagctgaatcctctgtgaatgcatcaaagaggtatggtaa 14664778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 210
Target Start/End: Complemental strand, 15285478 - 15285436
Alignment:
Q  168 agaaagttgaatcctctgtaaatgcatcaaagaggtacggtaa 210  Q
    |||||||||||||||| | |||||||||||||||| |||||||    
T  15285478 agaaagttgaatcctccgcaaatgcatcaaagaggaacggtaa 15285436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 210
Target Start/End: Original strand, 17013718 - 17013760
Alignment:
Q  168 agaaagttgaatcctctgtaaatgcatcaaagaggtacggtaa 210  Q
    |||||| |||||||||||| ||||||||||||||||| |||||    
T  17013718 agaaagctgaatcctctgtgaatgcatcaaagaggtatggtaa 17013760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 22 - 167
Target Start/End: Original strand, 14098078 - 14098223
Alignment:
Q  22 ggggcagctgcccgcatcactcccgatcttgacgaagaggagatgactcagacattcctgaagactctgaaaaaggattatatcgaaagaatgatcattg 121  Q
    |||||||||||||| |||||||| | | | || || || || ||||| ||||| ||| | |||||  |||| || |||||| | || || |||||||| |    
T  14098078 ggggcagctgcccgtatcactcctgctttagatgaggaagaaatgacccagacgttcttaaagacgttgaagaaagattatgttgagaggatgatcatcg 14098177  T
Q  122 ctgctccaaataacttctctgagatggtcaccatggggactcgtct 167  Q
    |||| || || ||||| || ||||||||||||||||| || |||||    
T  14098178 ctgccccgaacaacttttcggagatggtcaccatgggaacccgtct 14098223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 22 - 167
Target Start/End: Original strand, 30753279 - 30753424
Alignment:
Q  22 ggggcagctgcccgcatcactcccgatcttgacgaagaggagatgactcagacattcctgaagactctgaaaaaggattatatcgaaagaatgatcattg 121  Q
    |||||||||||||| |||||||| | | | || ||||| || ||||| ||||||||| | || ||  |||| || |||||| | || || |||||||| |    
T  30753279 ggggcagctgcccgtatcactcctgctttagatgaagaagaaatgacccagacattcttaaaaaccttgaagaaagattatgttgagaggatgatcatcg 30753378  T
Q  122 ctgctccaaataacttctctgagatggtcaccatggggactcgtct 167  Q
    |||| || || ||||| || ||||||||||| ||||| || |||||    
T  30753379 ctgccccgaacaacttttcggagatggtcactatgggaacccgtct 30753424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 22 - 167
Target Start/End: Complemental strand, 40106372 - 40106227
Alignment:
Q  22 ggggcagctgcccgcatcactcccgatcttgacgaagaggagatgactcagacattcctgaagactctgaaaaaggattatatcgaaagaatgatcattg 121  Q
    ||||| |||||||| |||||||| | | | || || || || ||||| ||||||||| | |||||  |||| || |||||| | || || |||||||| |    
T  40106372 ggggcggctgcccgtatcactcctgctttagatgaggaagaaatgacccagacattcttaaagaccttgaagaaagattatgttgagaggatgatcatcg 40106273  T
Q  122 ctgctccaaataacttctctgagatggtcaccatggggactcgtct 167  Q
    |||| || || ||||| || ||||||||||| |||||||| |||||    
T  40106272 ctgccccgaacaacttttcggagatggtcactatggggacccgtct 40106227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 22 - 167
Target Start/End: Original strand, 54832927 - 54833072
Alignment:
Q  22 ggggcagctgcccgcatcactcccgatcttgacgaagaggagatgactcagacattcctgaagactctgaaaaaggattatatcgaaagaatgatcattg 121  Q
    |||||||||||||| |||||||| | | | || ||||| || ||||| ||||| ||| | |||||  |||| || |||||| | || || |||||||| |    
T  54832927 ggggcagctgcccgtatcactcctgctttagatgaagaagaaatgacccagacgttcttaaagaccttgaagaaagattatgttgagaggatgatcatcg 54833026  T
Q  122 ctgctccaaataacttctctgagatggtcaccatggggactcgtct 167  Q
    |||| || || ||||| || ||||||||||| ||||| || |||||    
T  54833027 ctgccccgaacaacttttcggagatggtcactatgggaacccgtct 54833072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 136; Significance: 4e-71; HSPs: 29)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 12 - 171
Target Start/End: Complemental strand, 16450625 - 16450466
Alignment:
Q  12 gagatgaaggggggcagctgcccgcatcactcccgatcttgacgaagaggagatgactcagacattcctgaagactctgaaaaaggattatatcgaaaga 111  Q
    |||||| || |||| |||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  16450625 gagatggagaggggtagctgcccgcatcactcccgctcttgatgaagaggagatgactcagacattcctgaagactctgaaaaaggattatgtcgaaaga 16450526  T
Q  112 atgatcattgctgctccaaataacttctctgagatggtcaccatggggactcgtctagaa 171  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16450525 atgatcattgctgctccaaataacttctctgagatggtcaccatggggactcgtctagaa 16450466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 13 - 171
Target Start/End: Original strand, 16040840 - 16040998
Alignment:
Q  13 agatgaaggggggcagctgcccgcatcactcccgatcttgacgaagaggagatgactcagacattcctgaagactctgaaaaaggattatatcgaaagaa 112  Q
    ||||| |||||||||||||||||||||||||||| |||||| ||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  16040840 agatggaggggggcagctgcccgcatcactcccgctcttgatgaagaagagatgactcagacattcctgaagactctgaaaaaggattatgtcgaaagaa 16040939  T
Q  113 tgatcattgctgctccaaataacttctctgagatggtcaccatggggactcgtctagaa 171  Q
    ||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||    
T  16040940 tgatcattgctgctccaaataacttctctgaaatggtcaccatgggaactcgtctagaa 16040998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 12 - 167
Target Start/End: Complemental strand, 16519046 - 16518891
Alignment:
Q  12 gagatgaaggggggcagctgcccgcatcactcccgatcttgacgaagaggagatgactcagacattcctgaagactctgaaaaaggattatatcgaaaga 111  Q
    |||||| |||||||||||||||||||| |||||||  ||||| ||||| || ||||| ||||||||||| |||||  |||||||||||||| | || |||    
T  16519046 gagatggaggggggcagctgcccgcattactcccgcccttgatgaagaagaaatgacccagacattcctaaagaccttgaaaaaggattatgttgagaga 16518947  T
Q  112 atgatcattgctgctccaaataacttctctgagatggtcaccatggggactcgtct 167  Q
    ||||| |||||||| || ||||||||||| ||||||||||||||||| ||||||||    
T  16518946 atgattattgctgccccgaataacttctcggagatggtcaccatgggaactcgtct 16518891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 12 - 167
Target Start/End: Complemental strand, 16504010 - 16503855
Alignment:
Q  12 gagatgaaggggggcagctgcccgcatcactcccgatcttgacgaagaggagatgactcagacattcctgaagactctgaaaaaggattatatcgaaaga 111  Q
    |||||| |||||||||||||||||||| |||||||  ||||| ||| | || ||||| ||||||||||| |||||  |||||||||||||| | || |||    
T  16504010 gagatggaggggggcagctgcccgcattactcccgcccttgatgaataagaaatgacccagacattcctaaagaccttgaaaaaggattatgttgagaga 16503911  T
Q  112 atgatcattgctgctccaaataacttctctgagatggtcaccatggggactcgtct 167  Q
    ||||| |||||||| || ||||||||||| ||||||||||||||||| ||||||||    
T  16503910 atgattattgctgccccgaataacttctcggagatggtcaccatgggaactcgtct 16503855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 12 - 167
Target Start/End: Original strand, 2154086 - 2154241
Alignment:
Q  12 gagatgaaggggggcagctgcccgcatcactcccgatcttgacgaagaggagatgactcagacattcctgaagactctgaaaaaggattatatcgaaaga 111  Q
    |||||| |||||||||||||||||||| ||||||| |||||| ||||| || ||||| ||||||||| | |||||  |||| ||||||||| | || |||    
T  2154086 gagatggaggggggcagctgcccgcattactcccgctcttgatgaagaagaaatgacccagacattcttaaagaccttgaagaaggattatgttgagaga 2154185  T
Q  112 atgatcattgctgctccaaataacttctctgagatggtcaccatggggactcgtct 167  Q
    |||||||| ||||| || |||||||| || ||||||||||||||||| ||||||||    
T  2154186 atgatcatcgctgccccgaataacttttcggagatggtcaccatgggaactcgtct 2154241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 12 - 167
Target Start/End: Original strand, 5127505 - 5127660
Alignment:
Q  12 gagatgaaggggggcagctgcccgcatcactcccgatcttgacgaagaggagatgactcagacattcctgaagactctgaaaaaggattatatcgaaaga 111  Q
    |||||| |||||||||||||||||||| ||||||| |||||| ||||| || ||||| || |||||| | || ||  |||| ||||||||| | || |||    
T  5127505 gagatggaggggggcagctgcccgcattactcccgctcttgatgaagaagaaatgacccaaacattcttaaaaaccttgaagaaggattatgttgagaga 5127604  T
Q  112 atgatcattgctgctccaaataacttctctgagatggtcaccatggggactcgtct 167  Q
    |||||||||||||| || |||||||| || ||||||||||||||||| || |||||    
T  5127605 atgatcattgctgccccgaataacttttcggagatggtcaccatgggaacccgtct 5127660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 12 - 167
Target Start/End: Complemental strand, 11425406 - 11425251
Alignment:
Q  12 gagatgaaggggggcagctgcccgcatcactcccgatcttgacgaagaggagatgactcagacattcctgaagactctgaaaaaggattatatcgaaaga 111  Q
    |||||| |||||||||||||||||||| ||||||| |||||| ||||| || ||||| ||||||||| | |||||  | || ||||||||| | || |||    
T  11425406 gagatggaggggggcagctgcccgcattactcccgctcttgatgaagaagaaatgacccagacattcttaaagacattaaagaaggattatgttgagaga 11425307  T
Q  112 atgatcattgctgctccaaataacttctctgagatggtcaccatggggactcgtct 167  Q
    |||||||| ||||| || |||||||| || ||||||||||||||||| || |||||    
T  11425306 atgatcatagctgccccgaataacttttcggagatggtcaccatgggaacccgtct 11425251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 12 - 167
Target Start/End: Complemental strand, 10917495 - 10917340
Alignment:
Q  12 gagatgaaggggggcagctgcccgcatcactcccgatcttgacgaagaggagatgactcagacattcctgaagactctgaaaaaggattatatcgaaaga 111  Q
    |||||| ||||| ||||||||||| || ||| ||| |||||| ||||| || |||||  |||||| | | |||||  |||||||||||||| | || |||    
T  10917495 gagatggaggggagcagctgcccgtattactaccgctcttgatgaagaagaaatgacctagacatccttaaagaccttgaaaaaggattatgttgagaga 10917396  T
Q  112 atgatcattgctgctccaaataacttctctgagatggtcaccatggggactcgtct 167  Q
    |||||||||||||| || |||||||| || ||||||||||||||||| ||||||||    
T  10917395 atgatcattgctgccccgaataacttttcggagatggtcaccatgggaactcgtct 10917340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 22 - 149
Target Start/End: Original strand, 5120983 - 5121110
Alignment:
Q  22 ggggcagctgcccgcatcactcccgatcttgacgaagaggagatgactcagacattcctgaagactctgaaaaaggattatatcgaaagaatgatcattg 121  Q
    |||||||||||||| |||||||| | | | || |||||||| |||||||||||||| ||||||||||| || ||||||||| | ||||| ||||| || |    
T  5120983 ggggcagctgcccgtatcactcctgctttagatgaagaggaaatgactcagacatttctgaagactctcaagaaggattatgttgaaaggatgattatcg 5121082  T
Q  122 ctgctccaaataacttctctgagatggt 149  Q
    | || ||||| || ||||| ||||||||    
T  5121083 cagccccaaacaatttctcagagatggt 5121110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 22 - 167
Target Start/End: Complemental strand, 16737080 - 16736935
Alignment:
Q  22 ggggcagctgcccgcatcactcccgatcttgacgaagaggagatgactcagacattcctgaagactctgaaaaaggattatatcgaaagaatgatcattg 121  Q
    ||||| |||||||| |||||||| | | | || ||||| || ||||||||||||||| | |||||  |||| || |||||| | || ||||||||||| |    
T  16737080 ggggcggctgcccgtatcactcctgctttagatgaagaagaaatgactcagacattcttaaagaccttgaagaaagattatgttgagagaatgatcatcg 16736981  T
Q  122 ctgctccaaataacttctctgagatggtcaccatggggactcgtct 167  Q
    |||| || || ||||| || ||||||||||||||||| || |||||    
T  16736980 ctgccccgaacaacttttcggagatggtcaccatgggaacccgtct 16736935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 22 - 167
Target Start/End: Complemental strand, 16752134 - 16751989
Alignment:
Q  22 ggggcagctgcccgcatcactcccgatcttgacgaagaggagatgactcagacattcctgaagactctgaaaaaggattatatcgaaagaatgatcattg 121  Q
    ||||| |||||||| |||||||| | | | || ||||| || ||||||||||||||| | |||||  |||| || |||||| | || ||||||||||| |    
T  16752134 ggggcggctgcccgtatcactcctgctttagatgaagaagaaatgactcagacattcttaaagaccttgaagaaagattatgttgagagaatgatcatcg 16752035  T
Q  122 ctgctccaaataacttctctgagatggtcaccatggggactcgtct 167  Q
    |||| || || ||||| || ||||||||||||||||| || |||||    
T  16752034 ctgccccgaacaacttttcggagatggtcaccatgggaacccgtct 16751989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 22 - 167
Target Start/End: Original strand, 17523055 - 17523200
Alignment:
Q  22 ggggcagctgcccgcatcactcccgatcttgacgaagaggagatgactcagacattcctgaagactctgaaaaaggattatatcgaaagaatgatcattg 121  Q
    ||||| |||||||| |||||||| | | | || ||||| || ||||||||||||||| | |||||  |||| || |||||| | || ||||||||||| |    
T  17523055 ggggcggctgcccgtatcactcctgctttagatgaagaagaaatgactcagacattcttaaagaccttgaagaaagattatgttgagagaatgatcatcg 17523154  T
Q  122 ctgctccaaataacttctctgagatggtcaccatggggactcgtct 167  Q
    |||| || || ||||| || ||||||||||||||||| || |||||    
T  17523155 ctgccccgaacaacttttcggagatggtcaccatgggaacccgtct 17523200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 22 - 167
Target Start/End: Complemental strand, 17530160 - 17530015
Alignment:
Q  22 ggggcagctgcccgcatcactcccgatcttgacgaagaggagatgactcagacattcctgaagactctgaaaaaggattatatcgaaagaatgatcattg 121  Q
    ||||| |||||||| |||||||| | | | || ||||| || ||||||||||||||| | |||||  |||| || |||||| | || ||||||||||| |    
T  17530160 ggggcggctgcccgtatcactcctgctttagatgaagaagaaatgactcagacattcttaaagaccttgaagaaagattatgttgagagaatgatcatcg 17530061  T
Q  122 ctgctccaaataacttctctgagatggtcaccatggggactcgtct 167  Q
    |||| || || ||||| || ||||||||||||||||| || |||||    
T  17530060 ctgccccgaacaacttttcggagatggtcaccatgggaacccgtct 17530015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 22 - 167
Target Start/End: Original strand, 31124434 - 31124579
Alignment:
Q  22 ggggcagctgcccgcatcactcccgatcttgacgaagaggagatgactcagacattcctgaagactctgaaaaaggattatatcgaaagaatgatcattg 121  Q
    |||||||||||||| |||||||| | | | || ||||| || ||||| ||||||||| | |||||  ||||||| |||||| | || || |||||||| |    
T  31124434 ggggcagctgcccgtatcactcctgctttagatgaagaagaaatgacccagacattcttaaagaccttgaaaaaagattatgttgagaggatgatcatcg 31124533  T
Q  122 ctgctccaaataacttctctgagatggtcaccatggggactcgtct 167  Q
    |||| || || ||||| || ||||||||||||||||| || |||||    
T  31124534 ctgccccgaacaacttttcggagatggtcaccatgggaacccgtct 31124579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 22 - 167
Target Start/End: Original strand, 22143183 - 22143328
Alignment:
Q  22 ggggcagctgcccgcatcactcccgatcttgacgaagaggagatgactcagacattcctgaagactctgaaaaaggattatatcgaaagaatgatcattg 121  Q
    |||||||||||||| |||||||| | | | || ||||| || ||||| ||||||||| | |||||  |||| || |||||| | || || |||||||| |    
T  22143183 ggggcagctgcccgtatcactcctgctttagatgaagaagaaatgacccagacattcttaaagaccttgaagaaagattatgttgagaggatgatcatcg 22143282  T
Q  122 ctgctccaaataacttctctgagatggtcaccatggggactcgtct 167  Q
    |||| || || ||||| || ||||||||||||||||| || |||||    
T  22143283 ctgccccgaacaacttttcggagatggtcaccatgggaacccgtct 22143328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 22 - 167
Target Start/End: Original strand, 26434780 - 26434925
Alignment:
Q  22 ggggcagctgcccgcatcactcccgatcttgacgaagaggagatgactcagacattcctgaagactctgaaaaaggattatatcgaaagaatgatcattg 121  Q
    |||||||||||||| |||||||| | | | || ||||| || ||||| ||||| ||| | |||||  ||||||| |||||| | || || |||||||| |    
T  26434780 ggggcagctgcccgtatcactcctgctttagatgaagaagaaatgacccagacgttcttaaagaccttgaaaaaagattatgttgagaggatgatcatcg 26434879  T
Q  122 ctgctccaaataacttctctgagatggtcaccatggggactcgtct 167  Q
    |||| || || ||||| || ||||||||||||||||| || |||||    
T  26434880 ctgccccgaacaacttttcggagatggtcaccatgggaacccgtct 26434925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 22 - 167
Target Start/End: Complemental strand, 26538493 - 26538348
Alignment:
Q  22 ggggcagctgcccgcatcactcccgatcttgacgaagaggagatgactcagacattcctgaagactctgaaaaaggattatatcgaaagaatgatcattg 121  Q
    |||||||||||||| |||||||| | | | || ||||| || ||||| ||||||||| |||||||  |||| || |||||| | || || |||||||| |    
T  26538493 ggggcagctgcccgtatcactcctgctttagatgaagaagaaatgacccagacattcttgaagaccttgaagaaagattatgttgagaggatgatcatcg 26538394  T
Q  122 ctgctccaaataacttctctgagatggtcaccatggggactcgtct 167  Q
    |||| || || ||||| || ||||||||||| ||||| || |||||    
T  26538393 ctgccccgaacaacttttcggagatggtcactatgggaacccgtct 26538348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 168 - 210
Target Start/End: Original strand, 16041030 - 16041072
Alignment:
Q  168 agaaagttgaatcctctgtaaatgcatcaaagaggtacggtaa 210  Q
    |||||||||||||||| |||||||||||||||||||| |||||    
T  16041030 agaaagttgaatcctccgtaaatgcatcaaagaggtatggtaa 16041072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 168 - 210
Target Start/End: Complemental strand, 16450434 - 16450392
Alignment:
Q  168 agaaagttgaatcctctgtaaatgcatcaaagaggtacggtaa 210  Q
    ||||||||||||||||||||||||||||||| || ||||||||    
T  16450434 agaaagttgaatcctctgtaaatgcatcaaaaagatacggtaa 16450392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 167
Target Start/End: Complemental strand, 5147960 - 5147815
Alignment:
Q  22 ggggcagctgcccgcatcactcccgatcttgacgaagaggagatgactcagacattcctgaagactctgaaaaaggattatatcgaaagaatgatcattg 121  Q
    |||||||||||||| || ||||| | | | || ||||| || ||||| ||||||||| | |||||  |||| || |||||| | || || |||||||| |    
T  5147960 ggggcagctgcccgtattactcctgctttagatgaagaagaaatgacccagacattcttaaagaccttgaagaaagattatgttgagaggatgatcatcg 5147861  T
Q  122 ctgctccaaataacttctctgagatggtcaccatggggactcgtct 167  Q
    |||| || || ||||| || ||||||||||||||||| || |||||    
T  5147860 ctgccccgaacaacttttcggagatggtcaccatgggaacccgtct 5147815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 167
Target Start/End: Complemental strand, 26486364 - 26486219
Alignment:
Q  22 ggggcagctgcccgcatcactcccgatcttgacgaagaggagatgactcagacattcctgaagactctgaaaaaggattatatcgaaagaatgatcattg 121  Q
    |||||||||||||| |||||||| | | | || ||||| || ||||| ||||| ||| | |||||  ||||||| |||||| | || || |||||||| |    
T  26486364 ggggcagctgcccgtatcactcctgctttagatgaagaagaaatgacccagacgttcttaaagaccttgaaaaaagattatgttgagaggatgatcatcg 26486265  T
Q  122 ctgctccaaataacttctctgagatggtcaccatggggactcgtct 167  Q
    |||| || || ||||| || |||||||| |||||||| || |||||    
T  26486264 ctgccccgaacaacttttcggagatggttaccatgggaacccgtct 26486219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 167
Target Start/End: Original strand, 45386866 - 45387011
Alignment:
Q  22 ggggcagctgcccgcatcactcccgatcttgacgaagaggagatgactcagacattcctgaagactctgaaaaaggattatatcgaaagaatgatcattg 121  Q
    |||||||||||||| |||||||| | | | || ||||| || ||||| ||||||||| | |||||  |||| || |||||| | || || |||||||| |    
T  45386866 ggggcagctgcccgtatcactcctgctttagatgaagaagaaatgacccagacattcttaaagaccttgaagaaagattatgttgagaggatgatcatcg 45386965  T
Q  122 ctgctccaaataacttctctgagatggtcaccatggggactcgtct 167  Q
    |||| || || ||||| || ||||||||||| ||||| || |||||    
T  45386966 ctgccccgaacaacttttcggagatggtcactatgggaacccgtct 45387011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 170 - 210
Target Start/End: Complemental strand, 16518853 - 16518813
Alignment:
Q  170 aaagttgaatcctctgtaaatgcatcaaagaggtacggtaa 210  Q
    |||| |||||||||||||||||||||||||||||| |||||    
T  16518853 aaagctgaatcctctgtaaatgcatcaaagaggtatggtaa 16518813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 210
Target Start/End: Original strand, 2154277 - 2154319
Alignment:
Q  168 agaaagttgaatcctctgtaaatgcatcaaagaggtacggtaa 210  Q
    |||||| |||||||||||| ||||||||||||||||| |||||    
T  2154277 agaaagctgaatcctctgtgaatgcatcaaagaggtatggtaa 2154319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 210
Target Start/End: Complemental strand, 10917304 - 10917262
Alignment:
Q  168 agaaagttgaatcctctgtaaatgcatcaaagaggtacggtaa 210  Q
    |||||| |||||||||||| ||||||||||||||||| |||||    
T  10917304 agaaagctgaatcctctgtgaatgcatcaaagaggtatggtaa 10917262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 167
Target Start/End: Complemental strand, 31565028 - 31564874
Alignment:
Q  13 agatgaaggggggcagctgcccgcatcactcccgatcttgacgaagaggagatgactcagacattcctgaagactctgaaaaaggattatatcgaaagaa 112  Q
    ||||| || |||||||||||||| |||||||| | | | || ||||| || ||||| ||||||||| | |||||  |||| || |||||| | || || |    
T  31565028 agatggagaggggcagctgcccgtatcactcctgctttagatgaagaagaaatgacccagacattcttaaagaccttgaagaaagattatgttgagagga 31564929  T
Q  113 tgatcattgctgctccaaataacttctctgagatggtcaccatggggactcgtct 167  Q
    ||||||| || || || || ||||| || ||||||||||| ||||| || |||||    
T  31564928 tgatcatcgccgccccgaacaacttttcggagatggtcactatgggaacccgtct 31564874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 22 - 167
Target Start/End: Complemental strand, 4145743 - 4145598
Alignment:
Q  22 ggggcagctgcccgcatcactcccgatcttgacgaagaggagatgactcagacattcctgaagactctgaaaaaggattatatcgaaagaatgatcattg 121  Q
    ||||| |||||||| |||||||| | | | || ||||| || ||||| ||||||||| | |||||  |||| || |||||| | || || |||||||| |    
T  4145743 ggggcggctgcccgtatcactcctgctttagatgaagaagaaatgacccagacattcttaaagaccttgaagaaagattatgttgagaggatgatcatcg 4145644  T
Q  122 ctgctccaaataacttctctgagatggtcaccatggggactcgtct 167  Q
    |||| || || ||||| || ||||||||||| ||||| || |||||    
T  4145643 ctgccccgaacaacttttcagagatggtcactatgggaacccgtct 4145598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 22 - 167
Target Start/End: Original strand, 11441083 - 11441228
Alignment:
Q  22 ggggcagctgcccgcatcactcccgatcttgacgaagaggagatgactcagacattcctgaagactctgaaaaaggattatatcgaaagaatgatcattg 121  Q
    |||||||||||||| |||||||| | | | || ||||| || ||||| ||||||||| | || ||  |||| || |||||| | || || |||||||| |    
T  11441083 ggggcagctgcccgtatcactcctgctttagatgaagaagaaatgacccagacattcttaaaaaccttgaagaaagattatgttgagaggatgatcatcg 11441182  T
Q  122 ctgctccaaataacttctctgagatggtcaccatggggactcgtct 167  Q
    |||| || || ||||| || ||||||||||| ||||| || |||||    
T  11441183 ctgccccgaacaacttttcagagatggtcactatgggaacccgtct 11441228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 210
Target Start/End: Complemental strand, 16503817 - 16503777
Alignment:
Q  170 aaagttgaatcctctgtaaatgcatcaaagaggtacggtaa 210  Q
    |||| |||||||||||| ||||||||||||||||| |||||    
T  16503817 aaagctgaatcctctgtgaatgcatcaaagaggtatggtaa 16503777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 136; Significance: 4e-71; HSPs: 50)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 12 - 171
Target Start/End: Original strand, 18529870 - 18530029
Alignment:
Q  12 gagatgaaggggggcagctgcccgcatcactcccgatcttgacgaagaggagatgactcagacattcctgaagactctgaaaaaggattatatcgaaaga 111  Q
    |||||| || ||||||||||||||||||||||||| |||||| ||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  18529870 gagatggagaggggcagctgcccgcatcactcccgctcttgatgaagaagagatgactcagacattcctgaagactctgaaaaaggattatgtcgaaaga 18529969  T
Q  112 atgatcattgctgctccaaataacttctctgagatggtcaccatggggactcgtctagaa 171  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18529970 atgatcattgctgctccaaataacttctctgagatggtcaccatggggactcgtctagaa 18530029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 12 - 171
Target Start/End: Complemental strand, 16627287 - 16627128
Alignment:
Q  12 gagatgaaggggggcagctgcccgcatcactcccgatcttgacgaagaggagatgactcagacattcctgaagactctgaaaaaggattatatcgaaaga 111  Q
    |||||| |||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||    
T  16627287 gagatggaggggggcagctgcccgcatcattcccgctcttgacgaagaggagatgactcagacattcctgaaaactctgaaaaaggattatgtcgaaaga 16627188  T
Q  112 atgatcattgctgctccaaataacttctctgagatggtcaccatggggactcgtctagaa 171  Q
    |||||||||||||||| | ||||||||| |||||||||||||||||||||||| ||||||    
T  16627187 atgatcattgctgctctagataacttctttgagatggtcaccatggggactcgcctagaa 16627128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 12 - 167
Target Start/End: Original strand, 8295448 - 8295603
Alignment:
Q  12 gagatgaaggggggcagctgcccgcatcactcccgatcttgacgaagaggagatgactcagacattcctgaagactctgaaaaaggattatatcgaaaga 111  Q
    |||||| |||||||||||||||||||| ||||||| |||||| ||||| || ||||| ||||||||| | |||||  |||||||||||||| | || |||    
T  8295448 gagatggaggggggcagctgcccgcattactcccgctcttgatgaagaagaaatgacccagacattcttaaagaccttgaaaaaggattatgttgagaga 8295547  T
Q  112 atgatcattgctgctccaaataacttctctgagatggtcaccatggggactcgtct 167  Q
    |||||||||||||| || |||||||| || ||||||||||||||||| ||||||||    
T  8295548 atgatcattgctgccccgaataacttttcggagatggtcaccatgggaactcgtct 8295603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 12 - 167
Target Start/End: Complemental strand, 8302049 - 8301894
Alignment:
Q  12 gagatgaaggggggcagctgcccgcatcactcccgatcttgacgaagaggagatgactcagacattcctgaagactctgaaaaaggattatatcgaaaga 111  Q
    |||||| |||||||||||||||||||| ||||||| |||||| ||||| || ||||| ||||||||| | |||||  |||||||||||||| | || |||    
T  8302049 gagatggaggggggcagctgcccgcattactcccgctcttgatgaagaagaaatgacccagacattcttaaagaccttgaaaaaggattatgttgagaga 8301950  T
Q  112 atgatcattgctgctccaaataacttctctgagatggtcaccatggggactcgtct 167  Q
    |||||||||||||| || |||||||| || ||||||||||||||||| ||||||||    
T  8301949 atgatcattgctgccccgaataacttttcggagatggtcaccatgggaactcgtct 8301894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 12 - 167
Target Start/End: Complemental strand, 15893491 - 15893336
Alignment:
Q  12 gagatgaaggggggcagctgcccgcatcactcccgatcttgacgaagaggagatgactcagacattcctgaagactctgaaaaaggattatatcgaaaga 111  Q
    |||||| |||||||||||||||||||| ||||||| |||||| ||||| || ||||| ||||| ||||| |||||  |||||||||||||| | || |||    
T  15893491 gagatggaggggggcagctgcccgcattactcccgctcttgatgaagaagaaatgacccagacgttcctaaagaccttgaaaaaggattatgttgagaga 15893392  T
Q  112 atgatcattgctgctccaaataacttctctgagatggtcaccatggggactcgtct 167  Q
    |||||||||||||| || ||||||||||| || |||||||||||||| ||||||||    
T  15893391 atgatcattgctgccccgaataacttctcggaaatggtcaccatgggaactcgtct 15893336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 12 - 167
Target Start/End: Complemental strand, 15741867 - 15741712
Alignment:
Q  12 gagatgaaggggggcagctgcccgcatcactcccgatcttgacgaagaggagatgactcagacattcctgaagactctgaaaaaggattatatcgaaaga 111  Q
    |||||| |||||||||||||||||||| ||||||| |||||| ||||| || ||||| ||||||||| | |||||  |||||||||||||| | || |||    
T  15741867 gagatggaggggggcagctgcccgcattactcccgctcttgatgaagaagaaatgacccagacattcttaaagaccttgaaaaaggattatgttgagaga 15741768  T
Q  112 atgatcattgctgctccaaataacttctctgagatggtcaccatggggactcgtct 167  Q
    |||||||| ||||| || |||||||| || ||||||||||||||||| ||||||||    
T  15741767 atgatcatcgctgccccgaataacttttcggagatggtcaccatgggaactcgtct 15741712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 12 - 167
Target Start/End: Original strand, 18050735 - 18050890
Alignment:
Q  12 gagatgaaggggggcagctgcccgcatcactcccgatcttgacgaagaggagatgactcagacattcctgaagactctgaaaaaggattatatcgaaaga 111  Q
    |||||| |||||||||||||||||||| ||||||| |||||| ||||| || ||||| ||||||||| | |||||  |||| ||||||||| | || |||    
T  18050735 gagatggaggggggcagctgcccgcattactcccgctcttgatgaagaagaaatgacccagacattcttaaagaccttgaagaaggattatgttgagaga 18050834  T
Q  112 atgatcattgctgctccaaataacttctctgagatggtcaccatggggactcgtct 167  Q
    |||||||||||||| || |||||||| || ||||||||||||||||| || |||||    
T  18050835 atgatcattgctgccccgaataacttttcggagatggtcaccatgggaacccgtct 18050890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 12 - 167
Target Start/End: Original strand, 35880239 - 35880394
Alignment:
Q  12 gagatgaaggggggcagctgcccgcatcactcccgatcttgacgaagaggagatgactcagacattcctgaagactctgaaaaaggattatatcgaaaga 111  Q
    |||||| |||||||||||||||||||| ||||||| |||||| ||||| || ||||| ||||||||| | |||||  |||| ||||||||| | || |||    
T  35880239 gagatggaggggggcagctgcccgcattactcccgctcttgatgaagaagaaatgacccagacattcttaaagaccttgaagaaggattatgttgagaga 35880338  T
Q  112 atgatcattgctgctccaaataacttctctgagatggtcaccatggggactcgtct 167  Q
    |||||||||||||| || |||||||| || ||||||||||||||||| || |||||    
T  35880339 atgatcattgctgccccgaataacttttcggagatggtcaccatgggaacccgtct 35880394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 12 - 167
Target Start/End: Complemental strand, 29149540 - 29149385
Alignment:
Q  12 gagatgaaggggggcagctgcccgcatcactcccgatcttgacgaagaggagatgactcagacattcctgaagactctgaaaaaggattatatcgaaaga 111  Q
    |||||| |||||||||||||||||||| ||||||| |||||| ||||| || ||||| ||||||||| | |||||  |||| ||||||||| | || |||    
T  29149540 gagatggaggggggcagctgcccgcattactcccgctcttgatgaagaagaaatgacccagacattcttaaagaccttgaagaaggattatgttgagaga 29149441  T
Q  112 atgatcattgctgctccaaataacttctctgagatggtcaccatggggactcgtct 167  Q
    |||||||| ||||| || |||||||| || ||||||||||||||||| || |||||    
T  29149440 atgatcatagctgccccgaataacttttcggagatggtcaccatgggaacccgtct 29149385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 13 - 167
Target Start/End: Original strand, 6191790 - 6191944
Alignment:
Q  13 agatgaaggggggcagctgcccgcatcactcccgatcttgacgaagaggagatgactcagacattcctgaagactctgaaaaaggattatatcgaaagaa 112  Q
    ||||| |||||||||||||||||||| ||||||| |||||| ||||| || ||||| ||||||||| | |||||  |||| ||||||||| | || ||||    
T  6191790 agatggaggggggcagctgcccgcattactcccgctcttgatgaagaagaaatgacccagacattcttaaagaccttgaagaaggattatgttgagagaa 6191889  T
Q  113 tgatcattgctgctccaaataacttctctgagatggtcaccatggggactcgtct 167  Q
    ||||||| ||||| || |||||||| || ||||||||||||||||| || |||||    
T  6191890 tgatcatagctgccccgaataacttttcggagatggtcaccatgggaacccgtct 6191944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 13 - 167
Target Start/End: Original strand, 18330148 - 18330302
Alignment:
Q  13 agatgaaggggggcagctgcccgcatcactcccgatcttgacgaagaggagatgactcagacattcctgaagactctgaaaaaggattatatcgaaagaa 112  Q
    ||||| |||||||||||||||||||| ||||||| ||| || ||||| || ||||| ||||||||| | |||||  |||| ||||||||| | || ||||    
T  18330148 agatggaggggggcagctgcccgcattactcccgctctggatgaagaagaaatgacccagacattcttaaagaccttgaagaaggattatgttgagagaa 18330247  T
Q  113 tgatcattgctgctccaaataacttctctgagatggtcaccatggggactcgtct 167  Q
    ||||||||||||| || |||||||| || ||||||||||||||||| || |||||    
T  18330248 tgatcattgctgccccgaataacttttcggagatggtcaccatgggaacccgtct 18330302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 12 - 167
Target Start/End: Complemental strand, 4797438 - 4797283
Alignment:
Q  12 gagatgaaggggggcagctgcccgcatcactcccgatcttgacgaagaggagatgactcagacattcctgaagactctgaaaaaggattatatcgaaaga 111  Q
    |||||| |||||||||||||| ||||| ||||||| |||||| ||||| || ||||| ||||||||| | |||||  |||| ||||||||| | || |||    
T  4797438 gagatggaggggggcagctgctcgcattactcccgctcttgatgaagaagaaatgacccagacattcttaaagaccttgaagaaggattatgttgagaga 4797339  T
Q  112 atgatcattgctgctccaaataacttctctgagatggtcaccatggggactcgtct 167  Q
    ||||||||| |||| || |||||||| || ||||||||||||||||| || |||||    
T  4797338 atgatcattactgccccgaataacttttcggagatggtcaccatgggaacccgtct 4797283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 13 - 167
Target Start/End: Original strand, 4721105 - 4721259
Alignment:
Q  13 agatgaaggggggcagctgcccgcatcactcccgatcttgacgaagaggagatgactcagacattcctgaagactctgaaaaaggattatatcgaaagaa 112  Q
    ||||| |||||||||||||||||||| ||||||| |||||| ||||| || ||||| ||||||||| | |||||  |||| ||||||||| | || ||||    
T  4721105 agatggaggggggcagctgcccgcattactcccgctcttgatgaagaagaaatgacccagacattcttaaagaccttgaagaaggattatgttgagagaa 4721204  T
Q  113 tgatcattgctgctccaaataacttctctgagatggtcaccatggggactcgtct 167  Q
    ||||||| | ||| || |||||||| || ||||||||||||||||| || |||||    
T  4721205 tgatcataggtgccccgaataacttttcggagatggtcaccatgggaacccgtct 4721259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 22 - 167
Target Start/End: Complemental strand, 22388350 - 22388205
Alignment:
Q  22 ggggcagctgcccgcatcactcccgatcttgacgaagaggagatgactcagacattcctgaagactctgaaaaaggattatatcgaaagaatgatcattg 121  Q
    |||||||||||||| |||||||| | | | || |||||||| |||||||||||||| ||||||||||| || ||||||||| | ||||| ||||| || |    
T  22388350 ggggcagctgcccgtatcactcctgctttagatgaagaggaaatgactcagacatttctgaagactctcaagaaggattatgttgaaaggatgattatcg 22388251  T
Q  122 ctgctccaaataacttctctgagatggtcaccatggggactcgtct 167  Q
    | || ||||| || ||||| |||||||| |||||||| || |||||    
T  22388250 cagccccaaacaatttctcagagatggttaccatgggaacacgtct 22388205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 22 - 167
Target Start/End: Original strand, 4892696 - 4892841
Alignment:
Q  22 ggggcagctgcccgcatcactcccgatcttgacgaagaggagatgactcagacattcctgaagactctgaaaaaggattatatcgaaagaatgatcattg 121  Q
    |||||||||||||| |||||||| | | | || |||||||| |||||||||||||| ||||||||||| || | ||||||| | ||||| ||||| || |    
T  4892696 ggggcagctgcccgtatcactcctgctttagatgaagaggaaatgactcagacatttctgaagactctcaagagggattatgttgaaaggatgattatcg 4892795  T
Q  122 ctgctccaaataacttctctgagatggtcaccatggggactcgtct 167  Q
    | || ||||| || ||||| |||||||| |||||||| || |||||    
T  4892796 cagccccaaacaatttctcagagatggttaccatgggaacacgtct 4892841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 22 - 167
Target Start/End: Original strand, 7072695 - 7072840
Alignment:
Q  22 ggggcagctgcccgcatcactcccgatcttgacgaagaggagatgactcagacattcctgaagactctgaaaaaggattatatcgaaagaatgatcattg 121  Q
    |||||||||||||| |||||||| | | | || ||||| || ||||| ||||||||| | |||||  |||| || |||||| | || ||||||||||| |    
T  7072695 ggggcagctgcccgtatcactcctgctttagatgaagaagaaatgacccagacattcttaaagaccttgaagaaagattatgttgagagaatgatcatcg 7072794  T
Q  122 ctgctccaaataacttctctgagatggtcaccatggggactcgtct 167  Q
    |||| || || ||||| || ||||||||||||||||| || |||||    
T  7072795 ctgccccgaacaacttttcggagatggtcaccatgggaacccgtct 7072840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 22 - 167
Target Start/End: Complemental strand, 18277827 - 18277682
Alignment:
Q  22 ggggcagctgcccgcatcactcccgatcttgacgaagaggagatgactcagacattcctgaagactctgaaaaaggattatatcgaaagaatgatcattg 121  Q
    |||||||||||||| |||||||| | | | || ||||| || ||||| ||||||||| | |||||  |||| || |||||| | || ||||||||||| |    
T  18277827 ggggcagctgcccgtatcactcctgctttagatgaagaagaaatgacccagacattcttaaagaccttgaagaaagattatgttgagagaatgatcatcg 18277728  T
Q  122 ctgctccaaataacttctctgagatggtcaccatggggactcgtct 167  Q
    |||| || || ||||| || ||||||||||||||||| || |||||    
T  18277727 ctgccccgaacaacttttcggagatggtcaccatgggaacccgtct 18277682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 22 - 167
Target Start/End: Complemental strand, 18293128 - 18292983
Alignment:
Q  22 ggggcagctgcccgcatcactcccgatcttgacgaagaggagatgactcagacattcctgaagactctgaaaaaggattatatcgaaagaatgatcattg 121  Q
    |||||||||||||| |||||||| | | | || ||||| || ||||| ||||||||| | |||||  |||| || |||||| | || ||||||||||| |    
T  18293128 ggggcagctgcccgtatcactcctgctttagatgaagaagaaatgacccagacattcttaaagaccttgaagaaagattatgttgagagaatgatcatcg 18293029  T
Q  122 ctgctccaaataacttctctgagatggtcaccatggggactcgtct 167  Q
    |||| || || ||||| || ||||||||||||||||| || |||||    
T  18293028 ctgccccgaacaacttttcggagatggtcaccatgggaacccgtct 18292983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 22 - 167
Target Start/End: Complemental strand, 18308429 - 18308284
Alignment:
Q  22 ggggcagctgcccgcatcactcccgatcttgacgaagaggagatgactcagacattcctgaagactctgaaaaaggattatatcgaaagaatgatcattg 121  Q
    |||||||||||||| |||||||| | | | || ||||| || ||||| ||||||||| | |||||  |||| || |||||| | || ||||||||||| |    
T  18308429 ggggcagctgcccgtatcactcctgctttagatgaagaagaaatgacccagacattcttaaagaccttgaagaaagattatgttgagagaatgatcatcg 18308330  T
Q  122 ctgctccaaataacttctctgagatggtcaccatggggactcgtct 167  Q
    |||| || || ||||| || ||||||||||||||||| || |||||    
T  18308329 ctgccccgaacaacttttcggagatggtcaccatgggaacccgtct 18308284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 22 - 167
Target Start/End: Original strand, 32438640 - 32438785
Alignment:
Q  22 ggggcagctgcccgcatcactcccgatcttgacgaagaggagatgactcagacattcctgaagactctgaaaaaggattatatcgaaagaatgatcattg 121  Q
    |||||||||||||| |||||||| | | | || ||||| || |||||||||||||| ||||||||||| || |  |||||| | ||||| ||||| || |    
T  32438640 ggggcagctgcccgtatcactcctgctttagatgaagaagaaatgactcagacatttctgaagactctcaagagagattatgttgaaaggatgattatcg 32438739  T
Q  122 ctgctccaaataacttctctgagatggtcaccatggggactcgtct 167  Q
    | || ||||| || ||||| |||||||| |||||||| || |||||    
T  32438740 cagcaccaaacaatttctcagagatggttaccatgggaacacgtct 32438785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 168 - 210
Target Start/End: Original strand, 18530061 - 18530103
Alignment:
Q  168 agaaagttgaatcctctgtaaatgcatcaaagaggtacggtaa 210  Q
    |||||||||||||||||||||||||||||||||| ||||||||    
T  18530061 agaaagttgaatcctctgtaaatgcatcaaagagatacggtaa 18530103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 22 - 167
Target Start/End: Original strand, 5466468 - 5466613
Alignment:
Q  22 ggggcagctgcccgcatcactcccgatcttgacgaagaggagatgactcagacattcctgaagactctgaaaaaggattatatcgaaagaatgatcattg 121  Q
    |||||||||||||| |||||||| | | | || ||||| || ||||| ||||||||| | |||||  |||| || |||||| | || || |||||||| |    
T  5466468 ggggcagctgcccgtatcactcctgctttagatgaagaagaaatgacccagacattcttaaagaccttgaagaaagattatgttgagaggatgatcatcg 5466567  T
Q  122 ctgctccaaataacttctctgagatggtcaccatggggactcgtct 167  Q
    |||| || || ||||| || ||||||||||||||||| || |||||    
T  5466568 ctgccccgaacaacttttcggagatggtcaccatgggaacccgtct 5466613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 22 - 167
Target Start/End: Original strand, 8211224 - 8211369
Alignment:
Q  22 ggggcagctgcccgcatcactcccgatcttgacgaagaggagatgactcagacattcctgaagactctgaaaaaggattatatcgaaagaatgatcattg 121  Q
    |||||||||||||| |||||||| | | | || ||||| || ||||| || |||||| | |||||  |||| || |||||| | || ||||||||||| |    
T  8211224 ggggcagctgcccgtatcactcctgctttagatgaagaagaaatgacccaaacattcttaaagaccttgaagaaagattatgttgagagaatgatcatcg 8211323  T
Q  122 ctgctccaaataacttctctgagatggtcaccatggggactcgtct 167  Q
    |||| || || ||||| || ||||||||||||||||| || |||||    
T  8211324 ctgccccgaacaacttttcggagatggtcaccatgggaacccgtct 8211369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 22 - 167
Target Start/End: Complemental strand, 11111136 - 11110991
Alignment:
Q  22 ggggcagctgcccgcatcactcccgatcttgacgaagaggagatgactcagacattcctgaagactctgaaaaaggattatatcgaaagaatgatcattg 121  Q
    |||||||||||||| |||||||| | | | || ||||| || ||||| ||||||||| | |||||  |||| || |||||| | || ||||||||||| |    
T  11111136 ggggcagctgcccgtatcactcctgctttagatgaagaagaaatgacccagacattcttaaagaccttgaagaaagattatgttgagagaatgatcatcg 11111037  T
Q  122 ctgctccaaataacttctctgagatggtcaccatggggactcgtct 167  Q
    |||| || || ||||| || ||||||||||| ||||| || |||||    
T  11111036 ctgccccgaacaacttttcggagatggtcactatgggaacccgtct 11110991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 22 - 167
Target Start/End: Original strand, 18242210 - 18242355
Alignment:
Q  22 ggggcagctgcccgcatcactcccgatcttgacgaagaggagatgactcagacattcctgaagactctgaaaaaggattatatcgaaagaatgatcattg 121  Q
    |||||||||||||| |||||||| | | | || ||||| || ||||| ||||||||| | |||||  ||||||| |||||| | || || |||||||| |    
T  18242210 ggggcagctgcccgtatcactcctgctttagatgaagaagaaatgacccagacattcttaaagaccttgaaaaaagattatgttgagaggatgatcatcg 18242309  T
Q  122 ctgctccaaataacttctctgagatggtcaccatggggactcgtct 167  Q
    |||| || || ||||| || ||||||||||| ||||| || |||||    
T  18242310 ctgccccgaacaacttttcggagatggtcactatgggaacccgtct 18242355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 22 - 167
Target Start/End: Original strand, 28020761 - 28020906
Alignment:
Q  22 ggggcagctgcccgcatcactcccgatcttgacgaagaggagatgactcagacattcctgaagactctgaaaaaggattatatcgaaagaatgatcattg 121  Q
    |||||||||||||| |||||||| | | | || ||||| || ||||| ||||||||| | |||||  ||||||| |||||| | || || |||||||| |    
T  28020761 ggggcagctgcccgtatcactcctgctttagatgaagaagaaatgacccagacattcttaaagaccttgaaaaaagattatgttgagaggatgatcatcg 28020860  T
Q  122 ctgctccaaataacttctctgagatggtcaccatggggactcgtct 167  Q
    |||| || || ||||| || ||||||||||| ||||| || |||||    
T  28020861 ctgccccgaacaacttttcggagatggtcactatgggaacccgtct 28020906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 22 - 167
Target Start/End: Complemental strand, 28116732 - 28116587
Alignment:
Q  22 ggggcagctgcccgcatcactcccgatcttgacgaagaggagatgactcagacattcctgaagactctgaaaaaggattatatcgaaagaatgatcattg 121  Q
    |||||||||||||| |||||||| | | | || ||||| || ||||| ||||||||| | |||||  |||| || |||||| | || || |||||||| |    
T  28116732 ggggcagctgcccgtatcactcctgctttagatgaagaagaaatgacccagacattcttaaagaccttgaagaaagattatgttgagaggatgatcatcg 28116633  T
Q  122 ctgctccaaataacttctctgagatggtcaccatggggactcgtct 167  Q
    |||| || || ||||| || ||||||||||||||||| || |||||    
T  28116632 ctgccccgaacaacttttcggagatggtcaccatgggaacccgtct 28116587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 22 - 167
Target Start/End: Complemental strand, 29665760 - 29665615
Alignment:
Q  22 ggggcagctgcccgcatcactcccgatcttgacgaagaggagatgactcagacattcctgaagactctgaaaaaggattatatcgaaagaatgatcattg 121  Q
    |||||||||||||| |||||||| | | | || ||||| || ||||| ||||||||| | |||||  |||| || |||||| | || || |||||||| |    
T  29665760 ggggcagctgcccgtatcactcctgctttagatgaagaagaaatgacccagacattcttaaagaccttgaagaaagattatgttgagaggatgatcatcg 29665661  T
Q  122 ctgctccaaataacttctctgagatggtcaccatggggactcgtct 167  Q
    |||| || || ||||| || ||||||||||||||||| || |||||    
T  29665660 ctgccccgaacaacttttcggagatggtcaccatgggaacccgtct 29665615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 168 - 210
Target Start/End: Complemental strand, 16627096 - 16627054
Alignment:
Q  168 agaaagttgaatcctctgtaaatgcatcaaagaggtacggtaa 210  Q
    |||||||||||||||| | ||||||||||||||||||||||||    
T  16627096 agaaagttgaatcctccgcaaatgcatcaaagaggtacggtaa 16627054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 167
Target Start/End: Complemental strand, 5610097 - 5609952
Alignment:
Q  22 ggggcagctgcccgcatcactcccgatcttgacgaagaggagatgactcagacattcctgaagactctgaaaaaggattatatcgaaagaatgatcattg 121  Q
    |||||||||||||| |||||||| | | | || || || || ||||| ||||||||| | |||||  |||| ||||||||| | || || |||||||| |    
T  5610097 ggggcagctgcccgtatcactcctgctttagatgaggaagaaatgacccagacattcttaaagaccttgaagaaggattatgttgagaggatgatcatcg 5609998  T
Q  122 ctgctccaaataacttctctgagatggtcaccatggggactcgtct 167  Q
    |||| || || ||||| || ||||||||||| ||||| || |||||    
T  5609997 ctgccccgaacaacttttcggagatggtcactatgggaacccgtct 5609952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 167
Target Start/End: Original strand, 10395619 - 10395764
Alignment:
Q  22 ggggcagctgcccgcatcactcccgatcttgacgaagaggagatgactcagacattcctgaagactctgaaaaaggattatatcgaaagaatgatcattg 121  Q
    |||||||||||||| |||||||| | | | || ||||| || ||||| ||||| ||| | |||||  ||||||| |||||| | || || |||||||| |    
T  10395619 ggggcagctgcccgtatcactcctgctttagatgaagaagaaatgacccagactttcttaaagaccttgaaaaaagattatgttgagaggatgatcatag 10395718  T
Q  122 ctgctccaaataacttctctgagatggtcaccatggggactcgtct 167  Q
    |||| || || ||||| || || |||||||||||||| || |||||    
T  10395719 ctgccccgaacaacttttcggaaatggtcaccatgggaacccgtct 10395764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 167
Target Start/End: Original strand, 21674176 - 21674321
Alignment:
Q  22 ggggcagctgcccgcatcactcccgatcttgacgaagaggagatgactcagacattcctgaagactctgaaaaaggattatatcgaaagaatgatcattg 121  Q
    |||||||||||||| |||||||| | | | || ||||| || ||||| ||||||||| | || ||  |||| || |||||| | || || |||||||| |    
T  21674176 ggggcagctgcccgtatcactcctgctttagatgaagaagaaatgacccagacattcttaaaaaccttgaagaaagattatgttgagaggatgatcatcg 21674275  T
Q  122 ctgctccaaataacttctctgagatggtcaccatggggactcgtct 167  Q
    |||| || || ||||| || ||||||||||||||||| || |||||    
T  21674276 ctgccccgaacaacttttcggagatggtcaccatgggaacccgtct 21674321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 167
Target Start/End: Complemental strand, 22871649 - 22871504
Alignment:
Q  22 ggggcagctgcccgcatcactcccgatcttgacgaagaggagatgactcagacattcctgaagactctgaaaaaggattatatcgaaagaatgatcattg 121  Q
    |||||||||||||| |||||||| | | | || ||||| || ||||| ||||||||| | |||||  |||| || |||||| | || || |||||||| |    
T  22871649 ggggcagctgcccgtatcactcctgctttagatgaagaagaaatgacccagacattcttaaagaccttgaagaaagattatgttgagaggatgatcatcg 22871550  T
Q  122 ctgctccaaataacttctctgagatggtcaccatggggactcgtct 167  Q
    |||| || || ||||| || ||||||||||| ||||| || |||||    
T  22871549 ctgccccgaacaacttttcggagatggtcactatgggaacccgtct 22871504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 167
Target Start/End: Complemental strand, 22886708 - 22886563
Alignment:
Q  22 ggggcagctgcccgcatcactcccgatcttgacgaagaggagatgactcagacattcctgaagactctgaaaaaggattatatcgaaagaatgatcattg 121  Q
    |||||||||||||| |||||||| | | | || ||||| || ||||| ||||||||| | |||||  |||| || |||||| | || || |||||||| |    
T  22886708 ggggcagctgcccgtatcactcctgctttagatgaagaagaaatgacccagacattcttaaagaccttgaagaaagattatgttgagaggatgatcatcg 22886609  T
Q  122 ctgctccaaataacttctctgagatggtcaccatggggactcgtct 167  Q
    |||| || || ||||| || ||||||||||| ||||| || |||||    
T  22886608 ctgccccgaacaacttttcggagatggtcactatgggaacccgtct 22886563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 167
Target Start/End: Original strand, 28338785 - 28338930
Alignment:
Q  22 ggggcagctgcccgcatcactcccgatcttgacgaagaggagatgactcagacattcctgaagactctgaaaaaggattatatcgaaagaatgatcattg 121  Q
    |||||||||||||| |||||||| | | | || || || || ||||| ||||||||| | |||||  |||| ||||||||| | || || |||||||| |    
T  28338785 ggggcagctgcccgtatcactcctgctttagatgaggaagaaatgacccagacattcttaaagaccttgaagaaggattatgttgagaggatgatcatcg 28338884  T
Q  122 ctgctccaaataacttctctgagatggtcaccatggggactcgtct 167  Q
    |||| || || ||||| || ||||||||||| ||||| || |||||    
T  28338885 ctgccccgaacaacttttcggagatggtcactatgggaacccgtct 28338930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 167
Target Start/End: Original strand, 47022936 - 47023081
Alignment:
Q  22 ggggcagctgcccgcatcactcccgatcttgacgaagaggagatgactcagacattcctgaagactctgaaaaaggattatatcgaaagaatgatcattg 121  Q
    |||||||||||||| |||||||| | | | || ||||| || ||||| ||||||||| | |||||  | || || |||||| | || |||||||| || |    
T  47022936 ggggcagctgcccgtatcactcctgctttagatgaagaagaaatgacccagacattcttaaagaccttaaagaaagattatgttgagagaatgattatcg 47023035  T
Q  122 ctgctccaaataacttctctgagatggtcaccatggggactcgtct 167  Q
    |||| || || ||||| || ||||||||||||||||| || |||||    
T  47023036 ctgccccgaacaacttttcggagatggtcaccatgggaacccgtct 47023081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 167
Target Start/End: Complemental strand, 50134846 - 50134701
Alignment:
Q  22 ggggcagctgcccgcatcactcccgatcttgacgaagaggagatgactcagacattcctgaagactctgaaaaaggattatatcgaaagaatgatcattg 121  Q
    |||||||||||||| |||||||| | | | || || || || ||||| ||||||||| | |||||  |||| ||||||||| | || || |||||||| |    
T  50134846 ggggcagctgcccgtatcactcctgctttagatgaggaagaaatgacccagacattcttaaagaccttgaagaaggattatgttgagaggatgatcatcg 50134747  T
Q  122 ctgctccaaataacttctctgagatggtcaccatggggactcgtct 167  Q
    |||| || || ||||| || ||||||||||| ||||| || |||||    
T  50134746 ctgccccgaacaacttttcggagatggtcactatgggaacccgtct 50134701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 167
Target Start/End: Complemental strand, 4347465 - 4347314
Alignment:
Q  16 tgaaggggggcagctgcccgcatcactcccgatcttgacgaagaggagatgactcagacattcctgaagactctgaaaaaggattatatcgaaagaatga 115  Q
    ||||| |||||||||||||| |||||||| | | | || ||||| || ||||| ||||| ||| | |||||  |||| || |||||| | || || ||||    
T  4347465 tgaagaggggcagctgcccgtatcactcctgctttagatgaagaagaaatgacccagacgttcttaaagaccttgaagaaagattatgttgagaggatga 4347366  T
Q  116 tcattgctgctccaaataacttctctgagatggtcaccatggggactcgtct 167  Q
    |||| ||||| || || ||||| || ||||||||||| ||||| || |||||    
T  4347365 tcatcgctgccccgaacaacttttcggagatggtcactatgggaacccgtct 4347314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 210
Target Start/End: Complemental strand, 4797247 - 4797205
Alignment:
Q  168 agaaagttgaatcctctgtaaatgcatcaaagaggtacggtaa 210  Q
    |||||| |||||||||||| ||||||||||||||||| |||||    
T  4797247 agaaagctgaatcctctgtgaatgcatcaaagaggtatggtaa 4797205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 210
Target Start/End: Original strand, 8295639 - 8295681
Alignment:
Q  168 agaaagttgaatcctctgtaaatgcatcaaagaggtacggtaa 210  Q
    |||||| |||||||||||| ||||||||||||||||| |||||    
T  8295639 agaaagctgaatcctctgtgaatgcatcaaagaggtatggtaa 8295681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 210
Target Start/End: Original strand, 18050926 - 18050968
Alignment:
Q  168 agaaagttgaatcctctgtaaatgcatcaaagaggtacggtaa 210  Q
    |||||| |||||||||||| ||||||||||||||||| |||||    
T  18050926 agaaagctgaatcctctgtgaatgcatcaaagaggtatggtaa 18050968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 22 - 167
Target Start/End: Complemental strand, 6543249 - 6543104
Alignment:
Q  22 ggggcagctgcccgcatcactcccgatcttgacgaagaggagatgactcagacattcctgaagactctgaaaaaggattatatcgaaagaatgatcattg 121  Q
    |||||||||||||| |||||||| | | | || ||||| || ||||| ||||| ||| | |||||  |||| || |||||| | || || |||||||| |    
T  6543249 ggggcagctgcccgtatcactcctgctttagatgaagaagaaatgacccagacgttcttaaagaccttgaagaaagattatgttgagaggatgatcatcg 6543150  T
Q  122 ctgctccaaataacttctctgagatggtcaccatggggactcgtct 167  Q
    |||| || || ||||| || ||||||||||| ||||| || |||||    
T  6543149 ctgccccgaacaacttttcggagatggtcactatgggaacccgtct 6543104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 22 - 167
Target Start/End: Complemental strand, 20577637 - 20577492
Alignment:
Q  22 ggggcagctgcccgcatcactcccgatcttgacgaagaggagatgactcagacattcctgaagactctgaaaaaggattatatcgaaagaatgatcattg 121  Q
    |||||||||||||| |||||||| | | | || ||||| || ||||| ||||||||| | || ||  |||| || |||||| | || || |||||||| |    
T  20577637 ggggcagctgcccgtatcactcctgctttagatgaagaagaaatgacccagacattcttaaaaaccttgaagaaagattatgttgagaggatgatcatcg 20577538  T
Q  122 ctgctccaaataacttctctgagatggtcaccatggggactcgtct 167  Q
    |||| || || ||||| || ||||||||||| ||||| || |||||    
T  20577537 ctgccccgaacaacttttcggagatggtcactatgggaacccgtct 20577492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 22 - 167
Target Start/End: Complemental strand, 31965248 - 31965103
Alignment:
Q  22 ggggcagctgcccgcatcactcccgatcttgacgaagaggagatgactcagacattcctgaagactctgaaaaaggattatatcgaaagaatgatcattg 121  Q
    ||||| |||||||| |||||||| | | | || || || || ||||| ||||||||| | |||||  |||| ||||||||| | || || |||||||| |    
T  31965248 ggggcggctgcccgtatcactcctgctttagatgaggaagaaatgacccagacattcttaaagaccttgaagaaggattatgttgagaggatgatcatcg 31965149  T
Q  122 ctgctccaaataacttctctgagatggtcaccatggggactcgtct 167  Q
    |||| || || ||||| || ||||||||||| ||||| || |||||    
T  31965148 ctgccccgaacaacttttcggagatggtcactatgggaacccgtct 31965103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 22 - 167
Target Start/End: Complemental strand, 36997864 - 36997719
Alignment:
Q  22 ggggcagctgcccgcatcactcccgatcttgacgaagaggagatgactcagacattcctgaagactctgaaaaaggattatatcgaaagaatgatcattg 121  Q
    |||||||||||||| |||||||| | | | || ||||| || ||||| ||||| ||| | |||||  |||| || |||||| | || || |||||||| |    
T  36997864 ggggcagctgcccgtatcactcctgctttagatgaagaagaaatgacccagacgttcttaaagacgttgaagaaagattatgttgagaggatgatcatcg 36997765  T
Q  122 ctgctccaaataacttctctgagatggtcaccatggggactcgtct 167  Q
    |||| || || ||||| || ||||||||||| ||||| || |||||    
T  36997764 ctgccccgaacaacttttcggagatggtcactatgggaacccgtct 36997719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 22 - 167
Target Start/End: Original strand, 48465398 - 48465543
Alignment:
Q  22 ggggcagctgcccgcatcactcccgatcttgacgaagaggagatgactcagacattcctgaagactctgaaaaaggattatatcgaaagaatgatcattg 121  Q
    |||||||||||||| |||||||| |   | || ||||| || ||||| ||||||||| | |||||  |||| || |||||| | || || |||||||| |    
T  48465398 ggggcagctgcccgtatcactcctgccttagatgaagaagaaatgacccagacattcttaaagaccttgaagaaagattatgttgagaggatgatcatcg 48465497  T
Q  122 ctgctccaaataacttctctgagatggtcaccatggggactcgtct 167  Q
    |||| || || ||||| || ||||||||||| ||||| || |||||    
T  48465498 ctgccccgaacaacttttcggagatggtcactatgggaacccgtct 48465543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 22 - 167
Target Start/End: Original strand, 51781494 - 51781639
Alignment:
Q  22 ggggcagctgcccgcatcactcccgatcttgacgaagaggagatgactcagacattcctgaagactctgaaaaaggattatatcgaaagaatgatcattg 121  Q
    |||||||||||||| |||||||| | | | || ||||| || ||||| ||||||||| | || ||  |||| || |||||| | || || |||||||| |    
T  51781494 ggggcagctgcccgtatcactcctgctttagatgaagaagaaatgacccagacattcttaaaaaccttgaagaaagattatgttgagaggatgatcatcg 51781593  T
Q  122 ctgctccaaataacttctctgagatggtcaccatggggactcgtct 167  Q
    |||| || || ||||| || ||||||||||| ||||| || |||||    
T  51781594 ctgccccgaacaacttttcagagatggtcactatgggaacccgtct 51781639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 22 - 167
Target Start/End: Original strand, 51796581 - 51796726
Alignment:
Q  22 ggggcagctgcccgcatcactcccgatcttgacgaagaggagatgactcagacattcctgaagactctgaaaaaggattatatcgaaagaatgatcattg 121  Q
    |||||||||||||| |||||||| | | | || ||||| || ||||| ||||||||| | || ||  |||| || |||||| | || || |||||||| |    
T  51796581 ggggcagctgcccgtatcactcctgctttagatgaagaagaaatgacccagacattcttaaaaaccttgaagaaagattatgttgagaggatgatcatcg 51796680  T
Q  122 ctgctccaaataacttctctgagatggtcaccatggggactcgtct 167  Q
    |||| || || ||||| || ||||||||||| ||||| || |||||    
T  51796681 ctgccccgaacaacttttcagagatggtcactatgggaacccgtct 51796726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 168 - 204
Target Start/End: Complemental strand, 15741676 - 15741640
Alignment:
Q  168 agaaagttgaatcctctgtaaatgcatcaaagaggta 204  Q
    |||||| |||||||||||| |||||||||||||||||    
T  15741676 agaaagctgaatcctctgtgaatgcatcaaagaggta 15741640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 168 - 204
Target Start/End: Complemental strand, 15893300 - 15893264
Alignment:
Q  168 agaaagttgaatcctctgtaaatgcatcaaagaggta 204  Q
    |||||| |||||||||||| |||||||||||||||||    
T  15893300 agaaagctgaatcctctgtgaatgcatcaaagaggta 15893264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 136; Significance: 4e-71; HSPs: 30)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 12 - 171
Target Start/End: Complemental strand, 21703894 - 21703735
Alignment:
Q  12 gagatgaaggggggcagctgcccgcatcactcccgatcttgacgaagaggagatgactcagacattcctgaagactctgaaaaaggattatatcgaaaga 111  Q
    |||||| |||||||||||||||||||||||||||| |||||| ||||| ||||||||||||| |||||||||||||||||||||||||||| ||||||||    
T  21703894 gagatggaggggggcagctgcccgcatcactcccgctcttgatgaagaagagatgactcagagattcctgaagactctgaaaaaggattatgtcgaaaga 21703795  T
Q  112 atgatcattgctgctccaaataacttctctgagatggtcaccatggggactcgtctagaa 171  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21703794 atgatcattgctgctccaaataacttctctgagatggtcaccatggggactcgtctagaa 21703735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 12 - 171
Target Start/End: Complemental strand, 19457151 - 19456992
Alignment:
Q  12 gagatgaaggggggcagctgcccgcatcactcccgatcttgacgaagaggagatgactcagacattcctgaagactctgaaaaaggattatatcgaaaga 111  Q
    |||||| |||||||||||||||||||||||||||| |||||| ||||||||||||||| ||||||||||||| |||||||||||||||||| ||||||||    
T  19457151 gagatggaggggggcagctgcccgcatcactcccgctcttgatgaagaggagatgacttagacattcctgaaaactctgaaaaaggattatgtcgaaaga 19457052  T
Q  112 atgatcattgctgctccaaataacttctctgagatggtcaccatggggactcgtctagaa 171  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  19457051 atgatcattgctgctccaaataacttctctgagatggtcaccatggggactcgcctagaa 19456992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 12 - 158
Target Start/End: Original strand, 27392501 - 27392647
Alignment:
Q  12 gagatgaaggggggcagctgcccgcatcactcccgatcttgacgaagaggagatgactcagacattcctgaagactctgaaaaaggattatatcgaaaga 111  Q
    |||||| |||||||||||||||||  | |||||   |||| | |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  27392501 gagatggaggggggcagctgcccgtgttactcctactcttaatgaagaggagatgactcagacattcctgaagactctgaaaaaggattatgtcgaaaga 27392600  T
Q  112 atgatcattgctgctccaaataacttctctgagatggtcaccatggg 158  Q
    |||||||| | |||||||| | |||||||||||||||||||||||||    
T  27392601 atgatcatcgttgctccaagtgacttctctgagatggtcaccatggg 27392647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 12 - 167
Target Start/End: Original strand, 20837426 - 20837581
Alignment:
Q  12 gagatgaaggggggcagctgcccgcatcactcccgatcttgacgaagaggagatgactcagacattcctgaagactctgaaaaaggattatatcgaaaga 111  Q
    |||||| |||||||||||||||||||| ||||||| |||||| ||||| || ||||| ||||||||| | |||||  |||||||||||||| | || |||    
T  20837426 gagatggaggggggcagctgcccgcattactcccgctcttgatgaagaagaaatgacccagacattcttaaagaccttgaaaaaggattatgttgagaga 20837525  T
Q  112 atgatcattgctgctccaaataacttctctgagatggtcaccatggggactcgtct 167  Q
    |||||||||||||| || ||||||||||| ||||||||||||||||| ||||||||    
T  20837526 atgatcattgctgccccgaataacttctcggagatggtcaccatgggaactcgtct 20837581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 12 - 167
Target Start/End: Original strand, 28881722 - 28881877
Alignment:
Q  12 gagatgaaggggggcagctgcccgcatcactcccgatcttgacgaagaggagatgactcagacattcctgaagactctgaaaaaggattatatcgaaaga 111  Q
    |||||| |||||||||||||||||||| ||||||| |||||| ||||| || ||||| ||||||||| | |||||  |||| ||||||||| | || |||    
T  28881722 gagatggaggggggcagctgcccgcattactcccgctcttgatgaagaagaaatgacccagacattcttaaagaccttgaagaaggattatgttgagaga 28881821  T
Q  112 atgatcattgctgctccaaataacttctctgagatggtcaccatggggactcgtct 167  Q
    |||||||||||||| || |||||||| || ||||||||||||||||| ||||||||    
T  28881822 atgatcattgctgccccgaataacttttcggagatggtcaccatgggaactcgtct 28881877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 12 - 167
Target Start/End: Complemental strand, 23129299 - 23129144
Alignment:
Q  12 gagatgaaggggggcagctgcccgcatcactcccgatcttgacgaagaggagatgactcagacattcctgaagactctgaaaaaggattatatcgaaaga 111  Q
    |||||| |||||||||||||||||||| ||||||| |||||| ||||| || ||||| ||||||||| | |||||  |||||||||||||| | || |||    
T  23129299 gagatggaggggggcagctgcccgcattactcccgctcttgatgaagaagaaatgacccagacattcttaaagaccttgaaaaaggattatgttgagaga 23129200  T
Q  112 atgatcattgctgctccaaataacttctctgagatggtcaccatggggactcgtct 167  Q
    |||||||| ||||| || |||||||| || ||||||||||||||||| || |||||    
T  23129199 atgatcatcgctgccccgaataacttttcggagatggtcaccatgggaacccgtct 23129144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 21 - 167
Target Start/End: Complemental strand, 27435168 - 27435022
Alignment:
Q  21 gggggcagctgcccgcatcactcccgatcttgacgaagaggagatgactcagacattcctgaagactctgaaaaaggattatatcgaaagaatgatcatt 120  Q
    |||||||||||||||||| |||||||  ||||| ||||| || ||||| ||||||||| | |||||  |||||||||||||| | || ||||||||||||    
T  27435168 gggggcagctgcccgcattactcccgcccttgatgaagaagaaatgacccagacattcttaaagaccttgaaaaaggattatgttgagagaatgatcatt 27435069  T
Q  121 gctgctccaaataacttctctgagatggtcaccatggggactcgtct 167  Q
    ||||| || ||||||||||| || |||||||||||||| ||||||||    
T  27435068 gctgccccgaataacttctcggaaatggtcaccatgggaactcgtct 27435022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 12 - 167
Target Start/End: Original strand, 12655050 - 12655205
Alignment:
Q  12 gagatgaaggggggcagctgcccgcatcactcccgatcttgacgaagaggagatgactcagacattcctgaagactctgaaaaaggattatatcgaaaga 111  Q
    |||||| |||||||||||||||||||| |||  || |||||| ||||| || ||||| ||||||||| | |||||  |||||||||||||| | || |||    
T  12655050 gagatggaggggggcagctgcccgcattactgtcgctcttgatgaagaagaaatgacccagacattcttaaagaccttgaaaaaggattatgttgagaga 12655149  T
Q  112 atgatcattgctgctccaaataacttctctgagatggtcaccatggggactcgtct 167  Q
    |||||||||||||| || |||||||| || ||||||||||||||||| || |||||    
T  12655150 atgatcattgctgccccgaataacttttcggagatggtcaccatgggaacccgtct 12655205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 22 - 167
Target Start/End: Original strand, 37374679 - 37374824
Alignment:
Q  22 ggggcagctgcccgcatcactcccgatcttgacgaagaggagatgactcagacattcctgaagactctgaaaaaggattatatcgaaagaatgatcattg 121  Q
    |||||||||||||| |||||||| | | | || ||||| || ||||| ||||||||| | |||||  |||| || |||||| | || ||||||||||| |    
T  37374679 ggggcagctgcccgtatcactcctgctttagatgaagaagaaatgacccagacattcttaaagaccttgaagaaagattatgttgagagaatgatcatcg 37374778  T
Q  122 ctgctccaaataacttctctgagatggtcaccatggggactcgtct 167  Q
    |||| || || ||||| || ||||||||||||||||| || |||||    
T  37374779 ctgccccgaacaacttttcggagatggtcaccatgggaacccgtct 37374824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 168 - 210
Target Start/End: Complemental strand, 21703703 - 21703661
Alignment:
Q  168 agaaagttgaatcctctgtaaatgcatcaaagaggtacggtaa 210  Q
    |||||||||||||||||||||||||||||||||| ||||||||    
T  21703703 agaaagttgaatcctctgtaaatgcatcaaagagatacggtaa 21703661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 22 - 167
Target Start/End: Complemental strand, 261488 - 261343
Alignment:
Q  22 ggggcagctgcccgcatcactcccgatcttgacgaagaggagatgactcagacattcctgaagactctgaaaaaggattatatcgaaagaatgatcattg 121  Q
    |||||||||||||| |||||||| | | | || ||||| || ||||| ||||||||| | |||||  |||| || |||||| | || ||||||||||| |    
T  261488 ggggcagctgcccgtatcactcctgctttagatgaagaagaaatgacccagacattcttaaagaccttgaagaaagattatgttgagagaatgatcatcg 261389  T
Q  122 ctgctccaaataacttctctgagatggtcaccatggggactcgtct 167  Q
    |||| || || ||||| || ||||||||||| ||||| || |||||    
T  261388 ctgccccgaacaacttttcggagatggtcactatgggaacccgtct 261343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 22 - 167
Target Start/End: Original strand, 27816492 - 27816637
Alignment:
Q  22 ggggcagctgcccgcatcactcccgatcttgacgaagaggagatgactcagacattcctgaagactctgaaaaaggattatatcgaaagaatgatcattg 121  Q
    |||||||||||||| |||||||| | | | || ||||| || ||||| ||||| ||| | |||||  |||| ||||||||| | || ||||||||||| |    
T  27816492 ggggcagctgcccgtatcactcctgctttagatgaagaagaaatgacccagacgttcttaaagaccttgaagaaggattatgttgagagaatgatcatcg 27816591  T
Q  122 ctgctccaaataacttctctgagatggtcaccatggggactcgtct 167  Q
    |||| || || ||||| || ||||||||||| ||||| || |||||    
T  27816592 ctgccccgaacaacttttcggagatggtcactatgggaacccgtct 27816637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 22 - 167
Target Start/End: Original strand, 34278967 - 34279112
Alignment:
Q  22 ggggcagctgcccgcatcactcccgatcttgacgaagaggagatgactcagacattcctgaagactctgaaaaaggattatatcgaaagaatgatcattg 121  Q
    |||||||||||||| |||||||| | | | || ||||| || ||||| ||||| ||| | |||||  |||| || |||||| | || ||||||||||| |    
T  34278967 ggggcagctgcccgtatcactcctgctttagatgaagaagaaatgacccagacgttcttaaagaccttgaagaaagattatgttgagagaatgatcatcg 34279066  T
Q  122 ctgctccaaataacttctctgagatggtcaccatggggactcgtct 167  Q
    |||| || || ||||| || ||||||||||||||||| || |||||    
T  34279067 ctgccccgaacaacttttcggagatggtcaccatgggaacccgtct 34279112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 22 - 167
Target Start/End: Complemental strand, 39052551 - 39052406
Alignment:
Q  22 ggggcagctgcccgcatcactcccgatcttgacgaagaggagatgactcagacattcctgaagactctgaaaaaggattatatcgaaagaatgatcattg 121  Q
    |||||||||||||| |||||||| | | | || ||||| || ||||| ||||||||| | |||||  |||| || |||||| | || || |||||||| |    
T  39052551 ggggcagctgcccgtatcactcctgctttagatgaagaagaaatgacccagacattcttaaagaccttgaagaaagattatgttgagaggatgatcatcg 39052452  T
Q  122 ctgctccaaataacttctctgagatggtcaccatggggactcgtct 167  Q
    |||| || || ||||| || ||||||||||||||||| || |||||    
T  39052451 ctgccccgaacaacttttcggagatggtcaccatgggaacccgtct 39052406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 168 - 210
Target Start/End: Complemental strand, 19456960 - 19456918
Alignment:
Q  168 agaaagttgaatcctctgtaaatgcatcaaagaggtacggtaa 210  Q
    |||||||||||||||| | ||||||||||||||||||||||||    
T  19456960 agaaagttgaatcctccgcaaatgcatcaaagaggtacggtaa 19456918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 167
Target Start/End: Complemental strand, 11635912 - 11635767
Alignment:
Q  22 ggggcagctgcccgcatcactcccgatcttgacgaagaggagatgactcagacattcctgaagactctgaaaaaggattatatcgaaagaatgatcattg 121  Q
    ||||| |||||||| |||||||| | | | || ||||| || ||||| ||||||||| | |||||  |||| || |||||| | || || |||||||| |    
T  11635912 ggggcggctgcccgtatcactcctgctttagatgaagaagaaatgacccagacattcttaaagaccttgaagaaagattatgttgagaggatgatcatcg 11635813  T
Q  122 ctgctccaaataacttctctgagatggtcaccatggggactcgtct 167  Q
    |||| || || ||||| || ||||||||||||||||| || |||||    
T  11635812 ctgccccgaacaacttttcggagatggtcaccatgggaacccgtct 11635767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 167
Target Start/End: Complemental strand, 11642101 - 11641956
Alignment:
Q  22 ggggcagctgcccgcatcactcccgatcttgacgaagaggagatgactcagacattcctgaagactctgaaaaaggattatatcgaaagaatgatcattg 121  Q
    ||||| |||||||| |||||||| | | | || ||||| || ||||| ||||||||| | |||||  |||| || |||||| | || || |||||||| |    
T  11642101 ggggcggctgcccgtatcactcctgctttagatgaagaagaaatgacccagacattcttaaagaccttgaagaaagattatgttgagaggatgatcatcg 11642002  T
Q  122 ctgctccaaataacttctctgagatggtcaccatggggactcgtct 167  Q
    |||| || || ||||| || ||||||||||||||||| || |||||    
T  11642001 ctgccccgaacaacttttcggagatggtcaccatgggaacccgtct 11641956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 167
Target Start/End: Complemental strand, 13937267 - 13937122
Alignment:
Q  22 ggggcagctgcccgcatcactcccgatcttgacgaagaggagatgactcagacattcctgaagactctgaaaaaggattatatcgaaagaatgatcattg 121  Q
    |||||||||||||||||||| || | | | || ||||| || ||||| || |||||| | |||||  |||| || |||||| | || || |||||||| |    
T  13937267 ggggcagctgcccgcatcacccctgctttagatgaagaagaaatgacccaaacattcttaaagaccttgaagaaagattatgttgagaggatgatcatcg 13937168  T
Q  122 ctgctccaaataacttctctgagatggtcaccatggggactcgtct 167  Q
    |||| || || ||||| || ||||||||||||||||| || |||||    
T  13937167 ctgccccgaacaacttttcggagatggtcaccatgggaacccgtct 13937122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 167
Target Start/End: Complemental strand, 22926751 - 22926606
Alignment:
Q  22 ggggcagctgcccgcatcactcccgatcttgacgaagaggagatgactcagacattcctgaagactctgaaaaaggattatatcgaaagaatgatcattg 121  Q
    |||||||||||||| |||||||| | | | || ||||| || ||||| ||||||||| | |||||  |||| || |||||| | || || |||||||| |    
T  22926751 ggggcagctgcccgtatcactcctgctttagatgaagaagaaatgacccagacattcttaaagaccttgaagaaagattatgttgagaggatgatcatcg 22926652  T
Q  122 ctgctccaaataacttctctgagatggtcaccatggggactcgtct 167  Q
    |||| || || ||||| || ||||||||||| ||||| || |||||    
T  22926651 ctgccccgaacaacttttcggagatggtcactatgggaacccgtct 22926606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 167
Target Start/End: Original strand, 27776725 - 27776870
Alignment:
Q  22 ggggcagctgcccgcatcactcccgatcttgacgaagaggagatgactcagacattcctgaagactctgaaaaaggattatatcgaaagaatgatcattg 121  Q
    |||||||| ||||| |||||||| | | | || ||||| || ||||| ||||| ||| | |||||  |||| ||||||||| | || ||||||||||| |    
T  27776725 ggggcagcagcccgtatcactcctgctttagatgaagaagaaatgacccagacgttcttaaagaccttgaagaaggattatgttgagagaatgatcatcg 27776824  T
Q  122 ctgctccaaataacttctctgagatggtcaccatggggactcgtct 167  Q
    |||| || || ||||| || ||||||||||| ||||| || |||||    
T  27776825 ctgccccgaacaacttttcggagatggtcactatgggaacccgtct 27776870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 167
Target Start/End: Original strand, 27803210 - 27803355
Alignment:
Q  22 ggggcagctgcccgcatcactcccgatcttgacgaagaggagatgactcagacattcctgaagactctgaaaaaggattatatcgaaagaatgatcattg 121  Q
    |||||||||||||| |||||||| | | | || ||||| || ||||| ||||||||| | |||||  |||| || |||||| | || || |||||||| |    
T  27803210 ggggcagctgcccgtatcactcctgctttagatgaagaagaaatgacccagacattcttaaagaccttgaagaaagattatgttgagaggatgatcatcg 27803309  T
Q  122 ctgctccaaataacttctctgagatggtcaccatggggactcgtct 167  Q
    |||| || || ||||| || ||||||||||| ||||| || |||||    
T  27803310 ctgccccgaacaacttttcggagatggtcactatgggaacccgtct 27803355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 167
Target Start/End: Original strand, 34285872 - 34286017
Alignment:
Q  22 ggggcagctgcccgcatcactcccgatcttgacgaagaggagatgactcagacattcctgaagactctgaaaaaggattatatcgaaagaatgatcattg 121  Q
    |||||||||||||| |||||||| | | | || ||||| || ||||| ||||| ||| | |||||  |||| ||||||||| | || || |||||||| |    
T  34285872 ggggcagctgcccgtatcactcctgctttagatgaagaagaaatgacccagacgttcttaaagaccttgaagaaggattatgttgagaggatgatcatcg 34285971  T
Q  122 ctgctccaaataacttctctgagatggtcaccatggggactcgtct 167  Q
    |||| || || ||||| || || |||||||||||||| || |||||    
T  34285972 ctgccccgaacaacttttcggaaatggtcaccatgggaacccgtct 34286017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 167
Target Start/End: Original strand, 34290932 - 34291077
Alignment:
Q  22 ggggcagctgcccgcatcactcccgatcttgacgaagaggagatgactcagacattcctgaagactctgaaaaaggattatatcgaaagaatgatcattg 121  Q
    |||||||||||||| |||||||| | | | || ||||| || ||||| ||||| ||| | |||||  |||| ||||||||| | || || |||||||| |    
T  34290932 ggggcagctgcccgtatcactcctgctttagatgaagaagaaatgacccagacgttcttaaagaccttgaagaaggattatgttgagaggatgatcatcg 34291031  T
Q  122 ctgctccaaataacttctctgagatggtcaccatggggactcgtct 167  Q
    |||| || || ||||| || || |||||||||||||| || |||||    
T  34291032 ctgccccgaacaacttttcggaaatggtcaccatgggaacccgtct 34291077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 167
Target Start/End: Original strand, 40233017 - 40233162
Alignment:
Q  22 ggggcagctgcccgcatcactcccgatcttgacgaagaggagatgactcagacattcctgaagactctgaaaaaggattatatcgaaagaatgatcattg 121  Q
    |||||||||||||| |||||||| | | | || ||||| || ||||| ||||||||| | |||||  |||| || |||||| | || || |||||||| |    
T  40233017 ggggcagctgcccgtatcactcctgctttagatgaagaagaaatgacccagacattcttaaagaccttgaagaaagattatgttgagaggatgatcatcg 40233116  T
Q  122 ctgctccaaataacttctctgagatggtcaccatggggactcgtct 167  Q
    |||| || || ||||| || ||||||||||| ||||| || |||||    
T  40233117 ctgccccgaacaacttttcggagatggtcactatgggaacccgtct 40233162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 210
Target Start/End: Complemental strand, 23129108 - 23129066
Alignment:
Q  168 agaaagttgaatcctctgtaaatgcatcaaagaggtacggtaa 210  Q
    |||||| |||||||||||| ||||||||||||||||| |||||    
T  23129108 agaaagctgaatcctctgtgaatgcatcaaagaggtatggtaa 23129066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 210
Target Start/End: Original strand, 28881913 - 28881955
Alignment:
Q  168 agaaagttgaatcctctgtaaatgcatcaaagaggtacggtaa 210  Q
    |||||| |||||||||||| ||||||||||||||||| |||||    
T  28881913 agaaagctgaatcctctgtgaatgcatcaaagaggtatggtaa 28881955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 22 - 167
Target Start/End: Complemental strand, 9350717 - 9350572
Alignment:
Q  22 ggggcagctgcccgcatcactcccgatcttgacgaagaggagatgactcagacattcctgaagactctgaaaaaggattatatcgaaagaatgatcattg 121  Q
    |||||||||||||| |||||||| | | | || ||||| || ||||| ||||||||| | || ||  |||| || |||||| | || || |||||||| |    
T  9350717 ggggcagctgcccgtatcactcctgctttagatgaagaagaaatgacccagacattcttaaaaaccttgaagaaagattatgttgagaggatgatcatcg 9350618  T
Q  122 ctgctccaaataacttctctgagatggtcaccatggggactcgtct 167  Q
    |||| || || ||||| || ||||||||||| ||||| || |||||    
T  9350617 ctgccccgaacaacttttcggagatggtcactatgggaacccgtct 9350572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 22 - 167
Target Start/End: Original strand, 12586319 - 12586464
Alignment:
Q  22 ggggcagctgcccgcatcactcccgatcttgacgaagaggagatgactcagacattcctgaagactctgaaaaaggattatatcgaaagaatgatcattg 121  Q
    |||||||||||||| |||||||| | | | || ||||| || ||||| ||||||||| | || ||  |||| || |||||| | || || |||||||| |    
T  12586319 ggggcagctgcccgtatcactcctgctttagatgaagaagaaatgacccagacattcttaaaaaccttgaagaaagattatgttgagaggatgatcatcg 12586418  T
Q  122 ctgctccaaataacttctctgagatggtcaccatggggactcgtct 167  Q
    |||| || || ||||| || ||||||||||| ||||| || |||||    
T  12586419 ctgccccgaacaacttttcggagatggtcactatgggaacccgtct 12586464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 22 - 167
Target Start/End: Complemental strand, 21677905 - 21677760
Alignment:
Q  22 ggggcagctgcccgcatcactcccgatcttgacgaagaggagatgactcagacattcctgaagactctgaaaaaggattatatcgaaagaatgatcattg 121  Q
    ||||| |||||||| |||||||| | | | || ||||| || ||||| ||||||||| | |||||  |||| || |||||| | || || |||||||| |    
T  21677905 ggggcggctgcccgtatcactcctgctttagatgaagaagaaatgacccagacattcttaaagaccttgaagaaagattatgttgagaggatgatcatcg 21677806  T
Q  122 ctgctccaaataacttctctgagatggtcaccatggggactcgtct 167  Q
    |||| || || ||||| || ||||||||||| ||||| || |||||    
T  21677805 ctgccccgaacaacttttcggagatggtcactatgggaacccgtct 21677760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 210
Target Start/End: Complemental strand, 27434984 - 27434944
Alignment:
Q  170 aaagttgaatcctctgtaaatgcatcaaagaggtacggtaa 210  Q
    |||| |||||||||||| ||||||||||||||||| |||||    
T  27434984 aaagctgaatcctctgtgaatgcatcaaagaggtatggtaa 27434944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 132; Significance: 1e-68; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 12 - 163
Target Start/End: Original strand, 25198553 - 25198704
Alignment:
Q  12 gagatgaaggggggcagctgcccgcatcactcccgatcttgacgaagaggagatgactcagacattcctgaagactctgaaaaaggattatatcgaaaga 111  Q
    |||||| |||||||||||||||||||||||||||| |||||| ||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  25198553 gagatggaggggggcagctgcccgcatcactcccgctcttgatgaagaagagatgactcagacattcctgaagactctgaaaaaggattatgtcgaaaga 25198652  T
Q  112 atgatcattgctgctccaaataacttctctgagatggtcaccatggggactc 163  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25198653 atgatcattgctgctccaaataacttctctgagatggtcaccatggggactc 25198704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 12 - 167
Target Start/End: Original strand, 23891727 - 23891882
Alignment:
Q  12 gagatgaaggggggcagctgcccgcatcactcccgatcttgacgaagaggagatgactcagacattcctgaagactctgaaaaaggattatatcgaaaga 111  Q
    |||||| |||||||||||| ||||||| ||||||| |||||| ||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  23891727 gagatggaggggggcagctacccgcattactcccgctcttgatgaagaagagatgactcagacattcctgaagactctgaaaaaggattatgtcgaaaga 23891826  T
Q  112 atgatcattgctgctccaaataacttctctgagatggtcaccatggggactcgtct 167  Q
    | |||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  23891827 aagatcattgctgctccaaataacttctatgagatggtcaccatggggactcgtct 23891882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 12 - 167
Target Start/End: Original strand, 24951631 - 24951786
Alignment:
Q  12 gagatgaaggggggcagctgcccgcatcactcccgatcttgacgaagaggagatgactcagacattcctgaagactctgaaaaaggattatatcgaaaga 111  Q
    |||||| |||||||||||||||||||| ||||||| |||||| ||||| || ||||| ||||||||||| |||||  |||||||||||||| | || |||    
T  24951631 gagatggaggggggcagctgcccgcattactcccgctcttgatgaagaagaaatgacccagacattcctaaagaccttgaaaaaggattatgttgagaga 24951730  T
Q  112 atgatcattgctgctccaaataacttctctgagatggtcaccatggggactcgtct 167  Q
    |||||||||||||| || ||||||||||| ||||||||||||||||| ||||||||    
T  24951731 atgatcattgctgccccgaataacttctcggagatggtcaccatgggaactcgtct 24951786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 12 - 167
Target Start/End: Complemental strand, 24688798 - 24688643
Alignment:
Q  12 gagatgaaggggggcagctgcccgcatcactcccgatcttgacgaagaggagatgactcagacattcctgaagactctgaaaaaggattatatcgaaaga 111  Q
    |||||| |||||||||||||||||||| ||||||| |||||| ||||| || ||||| ||||||||||| |||||  ||||||| |||||| | || |||    
T  24688798 gagatggaggggggcagctgcccgcattactcccgctcttgatgaagaagaaatgacccagacattcctaaagaccttgaaaaaagattatgttgagaga 24688699  T
Q  112 atgatcattgctgctccaaataacttctctgagatggtcaccatggggactcgtct 167  Q
    |||||||||||||| || ||||||||||| ||||||||||||||||| ||||||||    
T  24688698 atgatcattgctgccccgaataacttctcggagatggtcaccatgggaactcgtct 24688643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 12 - 167
Target Start/End: Original strand, 30934157 - 30934312
Alignment:
Q  12 gagatgaaggggggcagctgcccgcatcactcccgatcttgacgaagaggagatgactcagacattcctgaagactctgaaaaaggattatatcgaaaga 111  Q
    |||||| ||||||||||||||||| || ||||||| |||||| ||||| || ||||| ||||||||| | |||||  |||||||||||||| | || |||    
T  30934157 gagatggaggggggcagctgcccgtattactcccgctcttgatgaagaagaaatgacccagacattcttaaagaccttgaaaaaggattatgttgagaga 30934256  T
Q  112 atgatcattgctgctccaaataacttctctgagatggtcaccatggggactcgtct 167  Q
    |||||||||||||| || ||||||||||| ||||||||||||||||| ||||||||    
T  30934257 atgatcattgctgccccgaataacttctcggagatggtcaccatgggaactcgtct 30934312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 12 - 167
Target Start/End: Original strand, 11548875 - 11549030
Alignment:
Q  12 gagatgaaggggggcagctgcccgcatcactcccgatcttgacgaagaggagatgactcagacattcctgaagactctgaaaaaggattatatcgaaaga 111  Q
    |||||| |||||||||||||||||||| ||||||| |||||| ||||| || ||||| ||||||||| | |||||  |||| ||||||||| | || |||    
T  11548875 gagatggaggggggcagctgcccgcattactcccgctcttgatgaagaagaaatgacccagacattcttaaagaccttgaagaaggattatgttgagaga 11548974  T
Q  112 atgatcattgctgctccaaataacttctctgagatggtcaccatggggactcgtct 167  Q
    |||||||| ||||| || |||||||| || ||||||||||||||||| || |||||    
T  11548975 atgatcatagctgccccgaataacttttcggagatggtcaccatgggaacccgtct 11549030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 12 - 167
Target Start/End: Complemental strand, 23718629 - 23718475
Alignment:
Q  12 gagatgaaggggggcagctgcccgcatcactcccgatcttgacgaagaggagatgactcagacattcctgaagactctgaaaaaggattatatcgaaaga 111  Q
    |||||| |||||||| ||||||||||| ||||||| |||||| ||||| || ||||| ||||||||| | |||||  |||| ||||||||| | || |||    
T  23718629 gagatggaggggggctgctgcccgcattactcccgctcttgatgaagaagaaatgacccagacattcttaaagaccttgaagaaggattatgttgagaga 23718530  T
Q  112 atgatcattgctgctccaaataacttctctgagatggtcaccatggggactcgtct 167  Q
    |||||||| ||||| || |||||||| || ||||||||||||||||| ||||||||    
T  23718529 atgatcatcgctgccccgaataacttttc-gagatggtcaccatgggaactcgtct 23718475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 13 - 167
Target Start/End: Original strand, 33777009 - 33777163
Alignment:
Q  13 agatgaaggggggcagctgcccgcatcactcccgatcttgacgaagaggagatgactcagacattcctgaagactctgaaaaaggattatatcgaaagaa 112  Q
    ||||| |||||||||||||||||||| ||||||| |||||| ||||| || ||||| ||||||||| | |||||  |||| ||||||||| | || ||||    
T  33777009 agatggaggggggcagctgcccgcattactcccgctcttgatgaagaagaaatgacccagacattcttaaagaccttgaagaaggattatgttgagagaa 33777108  T
Q  113 tgatcattgctgctccaaataacttctctgagatggtcaccatggggactcgtct 167  Q
    ||||||| ||||| |  |||||||| || ||||||||||||||||| || |||||    
T  33777109 tgatcatcgctgccctgaataacttttcggagatggtcaccatgggaacccgtct 33777163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 12 - 167
Target Start/End: Complemental strand, 23753092 - 23752936
Alignment:
Q  12 gagatgaaggggggcagctgcccgcatcactcccgatcttgacgaagaggagatgactcagacattcctgaa-gactctgaaaaaggattatatcgaaag 110  Q
    |||||| |||||||| ||||||||||| ||||||| |||||| ||||| || ||||  ||||||||| | || |||  |||| ||||||||| | || ||    
T  23753092 gagatggaggggggctgctgcccgcattactcccgctcttgatgaagaagaaatgaaccagacattcttaaaagaccttgaagaaggattatgttgagag 23752993  T
Q  111 aatgatcattgctgctccaaataacttctctgagatggtcaccatggggactcgtct 167  Q
    ||||||||| ||||| || |||||||| || ||||||||||||||||| ||||||||    
T  23752992 aatgatcatcgctgccccgaataacttttcagagatggtcaccatgggaactcgtct 23752936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 12 - 167
Target Start/End: Complemental strand, 22999755 - 22999600
Alignment:
Q  12 gagatgaaggggggcagctgcccgcatcactcccgatcttgacgaagaggagatgactcagacattcctgaagactctgaaaaaggattatatcgaaaga 111  Q
    |||||| |||||||| ||||||||||| ||||| | |||||| ||||| || ||||| ||||||||| | |||||  |||  ||||||||| | || |||    
T  22999755 gagatggaggggggctgctgcccgcattactcctgctcttgatgaagaagaaatgacccagacattcttaaagaccttgaggaaggattatgttgagaga 22999656  T
Q  112 atgatcattgctgctccaaataacttctctgagatggtcaccatggggactcgtct 167  Q
    |||||||| ||||| || |||||||| ||  |||||||||||||||| || |||||    
T  22999655 atgatcatagctgccccgaataacttttcgaagatggtcaccatgggaacccgtct 22999600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 22 - 167
Target Start/End: Original strand, 33292059 - 33292204
Alignment:
Q  22 ggggcagctgcccgcatcactcccgatcttgacgaagaggagatgactcagacattcctgaagactctgaaaaaggattatatcgaaagaatgatcattg 121  Q
    |||||||||||||| |||||||| | | | || ||||| || |||||||||||||| ||||||||||| || | ||||||| | ||||| ||||| || |    
T  33292059 ggggcagctgcccgtatcactcctgctttagatgaagaagaaatgactcagacatttctgaagactctcaagagggattatgttgaaaggatgattatcg 33292158  T
Q  122 ctgctccaaataacttctctgagatggtcaccatggggactcgtct 167  Q
    | || ||||| || ||||| |||||||| |||||||| || |||||    
T  33292159 cagccccaaacaatttctcagagatggttaccatgggaacacgtct 33292204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 22 - 167
Target Start/End: Original strand, 41674240 - 41674385
Alignment:
Q  22 ggggcagctgcccgcatcactcccgatcttgacgaagaggagatgactcagacattcctgaagactctgaaaaaggattatatcgaaagaatgatcattg 121  Q
    |||||||||||||| |||||||| | | | || ||||| || ||||| ||||||||| | |||||  |||| | ||||||| | || ||||||||||| |    
T  41674240 ggggcagctgcccgtatcactcctgctttagatgaagaagaaatgacccagacattcttaaagaccttgaagagggattatgttgagagaatgatcatag 41674339  T
Q  122 ctgctccaaataacttctctgagatggtcaccatggggactcgtct 167  Q
    |||| || |||||||| || ||||||||||||||||| || |||||    
T  41674340 ctgccccgaataacttttcggagatggtcaccatgggaacccgtct 41674385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 22 - 167
Target Start/End: Complemental strand, 9549174 - 9549029
Alignment:
Q  22 ggggcagctgcccgcatcactcccgatcttgacgaagaggagatgactcagacattcctgaagactctgaaaaaggattatatcgaaagaatgatcattg 121  Q
    |||||||||| ||| |||||||| | | | || ||||| || ||||| ||||||||| | |||||  |||| ||||||||| | || ||||||||||| |    
T  9549174 ggggcagctgtccgtatcactcctgctttagatgaagaagaaatgacccagacattcttaaagaccttgaagaaggattatgttgagagaatgatcatcg 9549075  T
Q  122 ctgctccaaataacttctctgagatggtcaccatggggactcgtct 167  Q
    |||| || || ||||| || ||||||||||||||||| || |||||    
T  9549074 ctgccccgaacaacttttcggagatggtcaccatgggaacccgtct 9549029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 22 - 167
Target Start/End: Complemental strand, 15659391 - 15659246
Alignment:
Q  22 ggggcagctgcccgcatcactcccgatcttgacgaagaggagatgactcagacattcctgaagactctgaaaaaggattatatcgaaagaatgatcattg 121  Q
    |||||||||||||| |||||||| | | | || ||||| || ||||| ||||||||| | |||||  |||| || |||||| | || ||||||||||| |    
T  15659391 ggggcagctgcccgtatcactcctgctttagatgaagaagaaatgacccagacattcttaaagaccttgaagaaagattatgttgagagaatgatcatcg 15659292  T
Q  122 ctgctccaaataacttctctgagatggtcaccatggggactcgtct 167  Q
    |||| || || ||||| || ||||||||||||||||| || |||||    
T  15659291 ctgccccgaacaacttttcggagatggtcaccatgggaacccgtct 15659246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 22 - 167
Target Start/End: Original strand, 3789057 - 3789202
Alignment:
Q  22 ggggcagctgcccgcatcactcccgatcttgacgaagaggagatgactcagacattcctgaagactctgaaaaaggattatatcgaaagaatgatcattg 121  Q
    |||||||||||||| |||||||| | | | || ||||| || ||||| ||||| ||| | |||||  ||||||| |||||| | || || |||||||| |    
T  3789057 ggggcagctgcccgtatcactcctgctttagatgaagaagaaatgacccagacgttcttaaagaccttgaaaaaagattatgttgagaggatgatcatcg 3789156  T
Q  122 ctgctccaaataacttctctgagatggtcaccatggggactcgtct 167  Q
    |||| || || ||||| || ||||||||||||||||| || |||||    
T  3789157 ctgccccgaacaacttttcggagatggtcaccatgggaacccgtct 3789202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 22 - 167
Target Start/End: Original strand, 28648757 - 28648902
Alignment:
Q  22 ggggcagctgcccgcatcactcccgatcttgacgaagaggagatgactcagacattcctgaagactctgaaaaaggattatatcgaaagaatgatcattg 121  Q
    |||||||||||||| |||||||| | | | || ||||| || ||||| ||||||||| |||||||  |||| || |||||| | || || |||||||| |    
T  28648757 ggggcagctgcccgtatcactcctgctttagatgaagaagaaatgacccagacattcttgaagaccttgaagaaagattatgttgagaggatgatcatcg 28648856  T
Q  122 ctgctccaaataacttctctgagatggtcaccatggggactcgtct 167  Q
    |||| || || ||||| || ||||||||||| ||||| || |||||    
T  28648857 ctgccccgaacaacttttcggagatggtcactatgggaacccgtct 28648902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 168 - 210
Target Start/End: Original strand, 25198744 - 25198786
Alignment:
Q  168 agaaagttgaatcctctgtaaatgcatcaaagaggtacggtaa 210  Q
    |||||||||||||||| || |||||||||||||||||||||||    
T  25198744 agaaagttgaatcctccgtgaatgcatcaaagaggtacggtaa 25198786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 167
Target Start/End: Complemental strand, 13325475 - 13325330
Alignment:
Q  22 ggggcagctgcccgcatcactcccgatcttgacgaagaggagatgactcagacattcctgaagactctgaaaaaggattatatcgaaagaatgatcattg 121  Q
    |||||||||||||| |||||||| | | | || ||||| || ||||| ||||||||| |||||||  |||| || |||||| | || || |||||||| |    
T  13325475 ggggcagctgcccgtatcactcctgctttagatgaagaagaaatgacccagacattcttgaagaccttgaagaaagattatgttgagaggatgatcatcg 13325376  T
Q  122 ctgctccaaataacttctctgagatggtcaccatggggactcgtct 167  Q
    | || || || ||||| || ||||||||||| ||||| || |||||    
T  13325375 ccgccccgaacaacttttcggagatggtcactatgggaacccgtct 13325330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 167
Target Start/End: Original strand, 31430959 - 31431104
Alignment:
Q  22 ggggcagctgcccgcatcactcccgatcttgacgaagaggagatgactcagacattcctgaagactctgaaaaaggattatatcgaaagaatgatcattg 121  Q
    |||||||||||||| |||||||| | | | || ||||| || ||||| ||||||||| |||||||  |||| || |||||| | || || |||||||| |    
T  31430959 ggggcagctgcccgtatcactcctgctttagatgaagaagaaatgacccagacattcttgaagaccttgaagaaagattatgttgagaggatgatcatcg 31431058  T
Q  122 ctgctccaaataacttctctgagatggtcaccatggggactcgtct 167  Q
    | || || || ||||| || ||||||||||| ||||| || |||||    
T  31431059 ccgccccgaacaacttttcggagatggtcactatgggaacccgtct 31431104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 167
Target Start/End: Complemental strand, 37672123 - 37671978
Alignment:
Q  22 ggggcagctgcccgcatcactcccgatcttgacgaagaggagatgactcagacattcctgaagactctgaaaaaggattatatcgaaagaatgatcattg 121  Q
    |||||||||||||| |||||||| | | | || ||||| || ||||| ||||||||| | |||||  |||| || |||||| | || || |||||||| |    
T  37672123 ggggcagctgcccgtatcactcctgctttagatgaagaagaaatgacccagacattcttaaagaccttgaagaaagattatgttgagaggatgatcatcg 37672024  T
Q  122 ctgctccaaataacttctctgagatggtcaccatggggactcgtct 167  Q
    |||| || || ||||| || ||||||||||| ||||| || |||||    
T  37672023 ctgccccgaacaacttttcggagatggtcactatgggaacccgtct 37671978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 167
Target Start/End: Complemental strand, 40474183 - 40474038
Alignment:
Q  22 ggggcagctgcccgcatcactcccgatcttgacgaagaggagatgactcagacattcctgaagactctgaaaaaggattatatcgaaagaatgatcattg 121  Q
    |||||||||||||| |||||||| | | | || ||||| || ||||| ||||||||| |||||||  |||| || |||||| | || || ||||| || |    
T  40474183 ggggcagctgcccgtatcactcctgctttagatgaagaagaaatgacccagacattcttgaagaccttgaagaaagattatgttgagaggatgattatcg 40474084  T
Q  122 ctgctccaaataacttctctgagatggtcaccatggggactcgtct 167  Q
    |||| || || ||||| || ||||||||||| ||||| || |||||    
T  40474083 ctgccccgaacaacttttcggagatggtcactatgggaacccgtct 40474038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 167
Target Start/End: Original strand, 43077780 - 43077925
Alignment:
Q  22 ggggcagctgcccgcatcactcccgatcttgacgaagaggagatgactcagacattcctgaagactctgaaaaaggattatatcgaaagaatgatcattg 121  Q
    |||||||||||||| |||||||| | | | || ||||| || ||||| ||||| ||| | |||||  |||| || |||||| | || || |||||||| |    
T  43077780 ggggcagctgcccgtatcactcctgctttagatgaagaagaaatgacccagacgttcttaaagaccttgaagaaagattatgttgagaggatgatcatcg 43077879  T
Q  122 ctgctccaaataacttctctgagatggtcaccatggggactcgtct 167  Q
    |||| || || ||||| || ||||||||||||||||| || |||||    
T  43077880 ctgccccgaacaacttttcggagatggtcaccatgggaacccgtct 43077925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 210
Target Start/End: Original strand, 23891918 - 23891960
Alignment:
Q  168 agaaagttgaatcctctgtaaatgcatcaaagaggtacggtaa 210  Q
    |||||||||||||||| || ||||||||||||||||| |||||    
T  23891918 agaaagttgaatcctccgtgaatgcatcaaagaggtatggtaa 23891960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 210
Target Start/End: Complemental strand, 24688607 - 24688565
Alignment:
Q  168 agaaagttgaatcctctgtaaatgcatcaaagaggtacggtaa 210  Q
    |||||| |||||||||||| ||||||||||||||||| |||||    
T  24688607 agaaagctgaatcctctgtgaatgcatcaaagaggtatggtaa 24688565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 210
Target Start/End: Original strand, 24951822 - 24951864
Alignment:
Q  168 agaaagttgaatcctctgtaaatgcatcaaagaggtacggtaa 210  Q
    |||||| |||||||||||| ||||||||||||||||| |||||    
T  24951822 agaaagctgaatcctctgtgaatgcatcaaagaggtatggtaa 24951864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 210
Target Start/End: Original strand, 30934348 - 30934390
Alignment:
Q  168 agaaagttgaatcctctgtaaatgcatcaaagaggtacggtaa 210  Q
    |||||| |||||||||||| ||||||||||||||||| |||||    
T  30934348 agaaagctgaatcctctgtgaatgcatcaaagaggtatggtaa 30934390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 22 - 167
Target Start/End: Original strand, 2510582 - 2510727
Alignment:
Q  22 ggggcagctgcccgcatcactcccgatcttgacgaagaggagatgactcagacattcctgaagactctgaaaaaggattatatcgaaagaatgatcattg 121  Q
    ||||| |||||||| |||||||| | | | || ||||| || ||||| ||||||||| | |||||  |||| || |||||| | || || |||||||| |    
T  2510582 ggggcggctgcccgtatcactcctgctttagatgaagaagaaatgacccagacattcttaaagaccttgaagaaagattatgttgagaggatgatcatcg 2510681  T
Q  122 ctgctccaaataacttctctgagatggtcaccatggggactcgtct 167  Q
    |||| || || ||||| || ||||||||||| ||||| || |||||    
T  2510682 ctgccccgaacaacttttcagagatggtcactatgggaacccgtct 2510727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 22 - 167
Target Start/End: Original strand, 6873833 - 6873978
Alignment:
Q  22 ggggcagctgcccgcatcactcccgatcttgacgaagaggagatgactcagacattcctgaagactctgaaaaaggattatatcgaaagaatgatcattg 121  Q
    ||||| |||||||| |||||||| | | | || ||||| || ||||| ||||||||| | |||||  |||| || |||||| | || || |||||||| |    
T  6873833 ggggcggctgcccgtatcactcctgctttagatgaagaagaaatgacccagacattcttaaagaccttgaagaaagattatgttgagaggatgatcatcg 6873932  T
Q  122 ctgctccaaataacttctctgagatggtcaccatggggactcgtct 167  Q
    |||| || || ||||| || ||||||||||| ||||| || |||||    
T  6873933 ctgccccgaacaacttttcggagatggtcactatgggaacccgtct 6873978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 22 - 167
Target Start/End: Complemental strand, 18501379 - 18501234
Alignment:
Q  22 ggggcagctgcccgcatcactcccgatcttgacgaagaggagatgactcagacattcctgaagactctgaaaaaggattatatcgaaagaatgatcattg 121  Q
    |||||||||||||| |||||||| | | | || ||||| || ||||| ||||||||| | || ||  |||| || |||||| | || || |||||||| |    
T  18501379 ggggcagctgcccgtatcactcctgctttagatgaagaagaaatgacccagacattcttaaaaaccttgaagaaagattatgttgagaggatgatcatcg 18501280  T
Q  122 ctgctccaaataacttctctgagatggtcaccatggggactcgtct 167  Q
    |||| || || ||||| || ||||||||||| ||||| || |||||    
T  18501279 ctgccccgaacaacttttcggagatggtcactatgggaacccgtct 18501234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 22 - 167
Target Start/End: Complemental strand, 28960429 - 28960284
Alignment:
Q  22 ggggcagctgcccgcatcactcccgatcttgacgaagaggagatgactcagacattcctgaagactctgaaaaaggattatatcgaaagaatgatcattg 121  Q
    |||||||||||||| |||||||| | | | || ||||| || ||||| ||||| ||| | |||||  |||| || |||||| | || || |||||||| |    
T  28960429 ggggcagctgcccgtatcactcctgctttagatgaagaagaaatgacccagacgttcttaaagaccttgaagaaagattatgttgagaggatgatcatcg 28960330  T
Q  122 ctgctccaaataacttctctgagatggtcaccatggggactcgtct 167  Q
    |||| || || ||||| || ||||||||||| ||||| || |||||    
T  28960329 ctgccccgaacaacttttcggagatggtcactatgggaacccgtct 28960284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 22 - 167
Target Start/End: Complemental strand, 31827050 - 31826905
Alignment:
Q  22 ggggcagctgcccgcatcactcccgatcttgacgaagaggagatgactcagacattcctgaagactctgaaaaaggattatatcgaaagaatgatcattg 121  Q
    |||||||||||||| |||||||| | | | || ||||| || ||||| ||||| ||| | |||||  |||| || |||||  |||| || |||||||| |    
T  31827050 ggggcagctgcccgtatcactcctgctttagatgaagaagaaatgacccagacgttcttaaagacgttgaagaaagattacgtcgagaggatgatcatcg 31826951  T
Q  122 ctgctccaaataacttctctgagatggtcaccatggggactcgtct 167  Q
    |||| || || ||||| || ||||||||||| ||||| || |||||    
T  31826950 ctgccccgaacaacttttcggagatggtcactatgggaacccgtct 31826905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 22 - 167
Target Start/End: Complemental strand, 32600100 - 32599955
Alignment:
Q  22 ggggcagctgcccgcatcactcccgatcttgacgaagaggagatgactcagacattcctgaagactctgaaaaaggattatatcgaaagaatgatcattg 121  Q
    |||||||||||||| |||||||| | | | || ||||| || ||||| ||||| ||| | |||||  |||| || |||||| | || || |||||||| |    
T  32600100 ggggcagctgcccgtatcactcctgctttagatgaagaagaaatgacccagacgttcttaaagaccttgaagaaagattatgttgagaggatgatcatcg 32600001  T
Q  122 ctgctccaaataacttctctgagatggtcaccatggggactcgtct 167  Q
    |||| || || ||||| || ||||||||||| ||||| || |||||    
T  32600000 ctgccccgaacaacttttcggagatggtcactatgggaacccgtct 32599955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 22 - 167
Target Start/End: Original strand, 34616052 - 34616197
Alignment:
Q  22 ggggcagctgcccgcatcactcccgatcttgacgaagaggagatgactcagacattcctgaagactctgaaaaaggattatatcgaaagaatgatcattg 121  Q
    |||||||||||||| |||||||| | | | || ||||| || ||||| ||||||||| | |||||  |||| || |||||| | || || |||||||| |    
T  34616052 ggggcagctgcccgtatcactcctgctttagatgaagaagaaatgacccagacattcttaaagaccttgaagaaagattatgttgagaggatgatcatcg 34616151  T
Q  122 ctgctccaaataacttctctgagatggtcaccatggggactcgtct 167  Q
    | || || || ||||| || ||||||||||| ||||| || |||||    
T  34616152 ccgccccgaacaacttttcggagatggtcactatgggaacccgtct 34616197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 22 - 167
Target Start/End: Complemental strand, 37359286 - 37359141
Alignment:
Q  22 ggggcagctgcccgcatcactcccgatcttgacgaagaggagatgactcagacattcctgaagactctgaaaaaggattatatcgaaagaatgatcattg 121  Q
    |||||||||||||| || ||||| | | | || ||||| || ||||| ||||||||| | |||||  |||| || |||||| | || || |||||||| |    
T  37359286 ggggcagctgcccgtattactcctgctttagatgaagaagaaatgacccagacattcttaaagaccttgaagaaagattatgttgagaggatgatcatcg 37359187  T
Q  122 ctgctccaaataacttctctgagatggtcaccatggggactcgtct 167  Q
    |||| || || ||||| || ||||||||||| ||||| || |||||    
T  37359186 ctgccccgaacaacttttcggagatggtcactatgggaacccgtct 37359141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 128; Significance: 2e-66; HSPs: 3)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 128; E-Value: 2e-66
Query Start/End: Original strand, 20 - 171
Target Start/End: Original strand, 19932 - 20083
Alignment:
Q  20 ggggggcagctgcccgcatcactcccgatcttgacgaagaggagatgactcagacattcctgaagactctgaaaaaggattatatcgaaagaatgatcat 119  Q
    |||||||||||| |||||||||||||| |||||| ||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  19932 ggggggcagctgtccgcatcactcccgctcttgatgaagaagagatgactcagacattcctgaagactctgaaaaaggattatgtcgaaagaatgatcat 20031  T
Q  120 tgctgctccaaataacttctctgagatggtcaccatggggactcgtctagaa 171  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  20032 tgctgctccaaataacttctctgagatggtcaccatggggactcgcctagaa 20083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124; HSP #2
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 12 - 167
Target Start/End: Original strand, 29965 - 30120
Alignment:
Q  12 gagatgaaggggggcagctgcccgcatcactcccgatcttgacgaagaggagatgactcagacattcctgaagactctgaaaaaggattatatcgaaaga 111  Q
    |||||| |||||||||||||| ||||| ||||||| |||||| ||||| || ||||| ||||||||| | |||||  |||| ||||||||| | || |||    
T  29965 gagatggaggggggcagctgctcgcattactcccgctcttgatgaagaagaaatgacccagacattcttaaagaccttgaagaaggattatgttgagaga 30064  T
Q  112 atgatcattgctgctccaaataacttctctgagatggtcaccatggggactcgtct 167  Q
    |||||||||||||| || |||||||| || ||||||||||||||||| ||||||||    
T  30065 atgatcattgctgccccgaataacttttcggagatggtcaccatgggaactcgtct 30120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124; HSP #3
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 168 - 210
Target Start/End: Original strand, 20115 - 20157
Alignment:
Q  168 agaaagttgaatcctctgtaaatgcatcaaagaggtacggtaa 210  Q
    |||||||||||||||| | ||||||||||||||||||||||||    
T  20115 agaaagttgaatcctccgcaaatgcatcaaagaggtacggtaa 20157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 127; Significance: 9e-66; HSPs: 4)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 127; E-Value: 9e-66
Query Start/End: Original strand, 21 - 171
Target Start/End: Complemental strand, 16208760 - 16208610
Alignment:
Q  21 gggggcagctgcccgcatcactcccgatcttgacgaagaggagatgactcagacattcctgaagactctgaaaaaggattatatcgaaagaatgatcatt 120  Q
    |||||||||||||||||||||||||| |||||||||||| |||| |||||||||||||||||||||||| |||||||||||| | |||||||||||||||    
T  16208760 gggggcagctgcccgcatcactcccgctcttgacgaagaagagaagactcagacattcctgaagactctaaaaaaggattatgttgaaagaatgatcatt 16208661  T
Q  121 gctgctccaaataacttctctgagatggtcaccatggggactcgtctagaa 171  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16208660 gctgctccaaataacttctctgagatggtcaccatggggactcgtctagaa 16208610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 13 - 171
Target Start/End: Original strand, 20460620 - 20460778
Alignment:
Q  13 agatgaaggggggcagctgcccgcatcactcccgatcttgacgaagaggagatgactcagacattcctgaagactctgaaaaaggattatatcgaaagaa 112  Q
    ||||| |||||||||||| ||||||||||||||| |||||||||||| |||||||||||||||||| |||| ||| |||||||||||||| |||||||||    
T  20460620 agatggaggggggcagcttcccgcatcactcccgctcttgacgaagacgagatgactcagacattcttgaaaactatgaaaaaggattatgtcgaaagaa 20460719  T
Q  113 tgatcattgctgctccaaataacttctctgagatggtcaccatggggactcgtctagaa 171  Q
    ||||||||||||| |||||||| ||||||||||||||||||||||||||||| ||||||    
T  20460720 tgatcattgctgccccaaataatttctctgagatggtcaccatggggactcgcctagaa 20460778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 168 - 210
Target Start/End: Complemental strand, 16208578 - 16208536
Alignment:
Q  168 agaaagttgaatcctctgtaaatgcatcaaagaggtacggtaa 210  Q
    |||||||||||||||||||||||||||||||||| ||||||||    
T  16208578 agaaagttgaatcctctgtaaatgcatcaaagagttacggtaa 16208536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 210
Target Start/End: Original strand, 20460810 - 20460852
Alignment:
Q  168 agaaagttgaatcctctgtaaatgcatcaaagaggtacggtaa 210  Q
    |||||||||||||||| |  |||||||||||||||||||||||    
T  20460810 agaaagttgaatcctccgccaatgcatcaaagaggtacggtaa 20460852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 100; Significance: 1e-49; HSPs: 36)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 12 - 171
Target Start/End: Original strand, 20160216 - 20160375
Alignment:
Q  12 gagatgaaggggggcagctgcccgcatcactcccgatcttgacgaagaggagatgactcagacattcctgaagactctgaaaaaggattatatcgaaaga 111  Q
    |||||| || |||||||||||||| |||||||||| |||||| ||||| |||||||||||||||||||| |||||| | |||||||||||| |||| |||    
T  20160216 gagatggagaggggcagctgcccgtatcactcccgctcttgatgaagaagagatgactcagacattcctaaagactttaaaaaaggattatgtcgagaga 20160315  T
Q  112 atgatcattgctgctccaaataacttctctgagatggtcaccatggggactcgtctagaa 171  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||| || |||||||||    
T  20160316 atgatcattgctgctccgagtaacttctctgagatggtcaccatgggaacccgtctagaa 20160375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 12 - 171
Target Start/End: Complemental strand, 22172615 - 22172456
Alignment:
Q  12 gagatgaaggggggcagctgcccgcatcactcccgatcttgacgaagaggagatgactcagacattcctgaagactctgaaaaaggattatatcgaaaga 111  Q
    |||||| || |||||||||||||| |||||||||| |||||| ||||| |||||||||||||||||||| |||||| | |||||||||||| |||| |||    
T  22172615 gagatggagaggggcagctgcccgtatcactcccgctcttgatgaagaagagatgactcagacattcctaaagactttaaaaaaggattatgtcgagaga 22172516  T
Q  112 atgatcattgctgctccaaataacttctctgagatggtcaccatggggactcgtctagaa 171  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||| || |||||||||    
T  22172515 atgatcattgctgctccgagtaacttctctgagatggtcaccatgggaacccgtctagaa 22172456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 12 - 167
Target Start/End: Complemental strand, 22935565 - 22935409
Alignment:
Q  12 gagatgaaggggggcag-ctgcccgcatcactcccgatcttgacgaagaggagatgactcagacattcctgaagactctgaaaaaggattatatcgaaag 110  Q
    |||||| |||||||||| |||||||||| ||||||| |||||| ||||| || ||||| ||||||||||| |||||  |||||||||||||| | || ||    
T  22935565 gagatggaggggggcaggctgcccgcattactcccgctcttgatgaagaagaaatgacccagacattcctaaagaccttgaaaaaggattatgttgagag 22935466  T
Q  111 aatgatcattgctgctccaaataacttctctgagatggtcaccatggggactcgtct 167  Q
    ||||||||||||||| || ||||||||||| ||||||||||||||||| ||||||||    
T  22935465 aatgatcattgctgccccgaataacttctcggagatggtcaccatgggaactcgtct 22935409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 12 - 167
Target Start/End: Complemental strand, 23858010 - 23857854
Alignment:
Q  12 gagatgaaggggggcag-ctgcccgcatcactcccgatcttgacgaagaggagatgactcagacattcctgaagactctgaaaaaggattatatcgaaag 110  Q
    |||||| |||||||||| |||||||||| ||||||| |||||| ||||| || ||||| ||||||||||| |||||  |||||||||||||| | || ||    
T  23858010 gagatggaggggggcaggctgcccgcattactcccgctcttgatgaagaagaaatgacccagacattcctaaagaccttgaaaaaggattatgttgagag 23857911  T
Q  111 aatgatcattgctgctccaaataacttctctgagatggtcaccatggggactcgtct 167  Q
    ||||||||||||||| || ||||||||||| ||||||||||||||||| ||||||||    
T  23857910 aatgatcattgctgccccgaataacttctcggagatggtcaccatgggaactcgtct 23857854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 12 - 167
Target Start/End: Complemental strand, 13299638 - 13299483
Alignment:
Q  12 gagatgaaggggggcagctgcccgcatcactcccgatcttgacgaagaggagatgactcagacattcctgaagactctgaaaaaggattatatcgaaaga 111  Q
    |||||| |||||||||||||||||||| ||||||| |||||| ||||| || ||||| ||||||||| | |||||  |||||||||||||| | || |||    
T  13299638 gagatggaggggggcagctgcccgcattactcccgctcttgatgaagaagaaatgacccagacattcttaaagaccttgaaaaaggattatgttgagaga 13299539  T
Q  112 atgatcattgctgctccaaataacttctctgagatggtcaccatggggactcgtct 167  Q
    |||||||||||||| || |||||||| || ||||||||||||||||| ||||||||    
T  13299538 atgatcattgctgccccgaataacttttcggagatggtcaccatgggaactcgtct 13299483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 12 - 167
Target Start/End: Original strand, 24863226 - 24863381
Alignment:
Q  12 gagatgaaggggggcagctgcccgcatcactcccgatcttgacgaagaggagatgactcagacattcctgaagactctgaaaaaggattatatcgaaaga 111  Q
    |||||| |||||||||||||||||||| ||||||| |||||| ||||| || ||||| ||||||||| | |||||  |||||||||||||| | || |||    
T  24863226 gagatggaggggggcagctgcccgcattactcccgctcttgatgaagaagaaatgacccagacattcttaaagaccttgaaaaaggattatgttgagaga 24863325  T
Q  112 atgatcattgctgctccaaataacttctctgagatggtcaccatggggactcgtct 167  Q
    |||||||||||||| || |||||||| || ||||||||||||||| | ||||||||    
T  24863326 atgatcattgctgccccgaataacttttcggagatggtcaccatgagaactcgtct 24863381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 12 - 167
Target Start/End: Original strand, 26988510 - 26988665
Alignment:
Q  12 gagatgaaggggggcagctgcccgcatcactcccgatcttgacgaagaggagatgactcagacattcctgaagactctgaaaaaggattatatcgaaaga 111  Q
    |||||| |||||||||||||||||||| ||||||| |||||| ||||| || ||||| ||||||||| | |||||  |||| ||||||||| | || |||    
T  26988510 gagatggaggggggcagctgcccgcattactcccgctcttgatgaagaagaaatgacccagacattcttaaagaccttgaagaaggattatgttgagaga 26988609  T
Q  112 atgatcattgctgctccaaataacttctctgagatggtcaccatggggactcgtct 167  Q
    |||||||||||||| || |||||||| || ||||||||||||||||| ||||||||    
T  26988610 atgatcattgctgccccgaataacttttcggagatggtcaccatgggaactcgtct 26988665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 12 - 167
Target Start/End: Complemental strand, 15425004 - 15424849
Alignment:
Q  12 gagatgaaggggggcagctgcccgcatcactcccgatcttgacgaagaggagatgactcagacattcctgaagactctgaaaaaggattatatcgaaaga 111  Q
    |||||| |||||||||||||||||||| ||||||| |||||| ||||| || ||||| ||||||||| | |||||  |||| ||||||||| | || |||    
T  15425004 gagatggaggggggcagctgcccgcattactcccgctcttgatgaagaagaaatgacccagacattcttaaagaccttgaagaaggattatgttgagaga 15424905  T
Q  112 atgatcattgctgctccaaataacttctctgagatggtcaccatggggactcgtct 167  Q
    |||||||| ||||| || |||||||| || ||||||||||||||||| ||||||||    
T  15424904 atgatcatcgctgccccgaataacttttcggagatggtcaccatgggaactcgtct 15424849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 12 - 167
Target Start/End: Original strand, 16749363 - 16749518
Alignment:
Q  12 gagatgaaggggggcagctgcccgcatcactcccgatcttgacgaagaggagatgactcagacattcctgaagactctgaaaaaggattatatcgaaaga 111  Q
    |||||| |||||||||||||||||||| ||||||| |||||| ||||| || ||||| ||||||||| | |||||  |||| ||||||||| | || |||    
T  16749363 gagatggaggggggcagctgcccgcattactcccgctcttgatgaagaagaaatgacccagacattcttaaagaccttgaagaaggattatgttgagaga 16749462  T
Q  112 atgatcattgctgctccaaataacttctctgagatggtcaccatggggactcgtct 167  Q
    |||||||| ||||| || |||||||| || ||||||||||||||||| || |||||    
T  16749463 atgatcatagctgccccgaataacttttcggagatggtcaccatgggaacccgtct 16749518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 12 - 167
Target Start/End: Original strand, 26999582 - 26999737
Alignment:
Q  12 gagatgaaggggggcagctgcccgcatcactcccgatcttgacgaagaggagatgactcagacattcctgaagactctgaaaaaggattatatcgaaaga 111  Q
    |||||| |||||||||||||| ||||| ||||||  |||||| ||||| || ||||| ||||||||| | |||||  |||||||||||||| | || |||    
T  26999582 gagatggaggggggcagctgctcgcattactcccactcttgatgaagaagaaatgacccagacattcttaaagaccttgaaaaaggattatgttgagaga 26999681  T
Q  112 atgatcattgctgctccaaataacttctctgagatggtcaccatggggactcgtct 167  Q
    |||||||||||||| || |||||||| || ||||||||||||||||| || |||||    
T  26999682 atgatcattgctgccccgaataacttttcggagatggtcaccatgggaacccgtct 26999737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 12 - 158
Target Start/End: Complemental strand, 24305305 - 24305159
Alignment:
Q  12 gagatgaaggggggcagctgcccgcatcactcccgatcttgacgaagaggagatgactcagacattcctgaagactctgaaaaaggattatatcgaaaga 111  Q
    |||||| ||||| ||||||||||| || ||||||| |||||| ||||| || ||||| ||||||||| | |||||  |||||||||||||| | || |||    
T  24305305 gagatggaggggagcagctgcccgtattactcccgctcttgatgaagaagaaatgacccagacattcttaaagaccttgaaaaaggattatgttgagaga 24305206  T
Q  112 atgatcattgctgctccaaataacttctctgagatggtcaccatggg 158  Q
    |||||||||||||| || |||||||| || |||||||||||||||||    
T  24305205 atgatcattgctgccccgaataacttttcggagatggtcaccatggg 24305159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 13 - 167
Target Start/End: Original strand, 26917890 - 26918044
Alignment:
Q  13 agatgaaggggggcagctgcccgcatcactcccgatcttgacgaagaggagatgactcagacattcctgaagactctgaaaaaggattatatcgaaagaa 112  Q
    ||||| |||||||||||||||||||| ||||||| |||||| ||||| || ||||| ||||||||| | |||||  |||| ||||||||| | || ||||    
T  26917890 agatggaggggggcagctgcccgcattactcccgctcttgatgaagaagaaatgacccagacattcttaaagaccttgaagaaggattatgttgagagaa 26917989  T
Q  113 tgatcattgctgctccaaataacttctctgagatggtcaccatggggactcgtct 167  Q
    ||||||| ||||| || |||||||| || ||||||||||||||||| || |||||    
T  26917990 tgatcatagctgccccgaataacttttcggagatggtcaccatgggaacccgtct 26918044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 13 - 170
Target Start/End: Complemental strand, 27273269 - 27273112
Alignment:
Q  13 agatgaaggggggcagctgcccgcatcactcccgatcttgacgaagaggagatgactcagacattcctgaagactctgaaaaaggattatatcgaaagaa 112  Q
    ||||| ||||| || |||||||| || ||||||| ||| || |||||||| |||||||| || ||| |||| ||  |||| || || ||||| ||||| |    
T  27273269 agatggaggggagctgctgcccgtattactcccgctctagaggaagaggaaatgactcaaactttcttgaaaaccttgaagaaagactatattgaaagga 27273170  T
Q  113 tgatcattgctgctccaaataacttctctgagatggtcaccatggggactcgtctaga 170  Q
    |||| ||||||||||| |  ||||| ||||| ||||| || |||||||||||||||||    
T  27273169 tgattattgctgctcctagcaacttttctgaaatggtaactatggggactcgtctaga 27273112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 22 - 167
Target Start/End: Complemental strand, 4546461 - 4546316
Alignment:
Q  22 ggggcagctgcccgcatcactcccgatcttgacgaagaggagatgactcagacattcctgaagactctgaaaaaggattatatcgaaagaatgatcattg 121  Q
    |||||||||||||| |||||||| | | | || ||||| || ||||| ||||| ||| | |||||  |||| || |||||| | || |||||||||||||    
T  4546461 ggggcagctgcccgtatcactcctgctttagatgaagaagaaatgacccagacgttcttaaagaccttgaagaaagattatgttgagagaatgatcattg 4546362  T
Q  122 ctgctccaaataacttctctgagatggtcaccatggggactcgtct 167  Q
    |||| || || ||||| || ||||||||||||||||| || |||||    
T  4546361 ctgccccgaacaacttttcggagatggtcaccatgggaacccgtct 4546316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 22 - 167
Target Start/End: Original strand, 28206961 - 28207106
Alignment:
Q  22 ggggcagctgcccgcatcactcccgatcttgacgaagaggagatgactcagacattcctgaagactctgaaaaaggattatatcgaaagaatgatcattg 121  Q
    |||||||||||||| |||||||| | | | || ||||| || ||||| ||||| ||| | |||||  |||| || |||||| | || |||||||||||||    
T  28206961 ggggcagctgcccgtatcactcctgctttagatgaagaagaaatgacccagacgttcttaaagaccttgaagaaagattatgttgagagaatgatcattg 28207060  T
Q  122 ctgctccaaataacttctctgagatggtcaccatggggactcgtct 167  Q
    |||| || || ||||| || ||||||||||||||||| || |||||    
T  28207061 ctgccccgaacaacttttcggagatggtcaccatgggaacccgtct 28207106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 22 - 167
Target Start/End: Original strand, 27043909 - 27044054
Alignment:
Q  22 ggggcagctgcccgcatcactcccgatcttgacgaagaggagatgactcagacattcctgaagactctgaaaaaggattatatcgaaagaatgatcattg 121  Q
    |||||||||||||| |||||||| | | | || ||||| || ||||| ||||| ||| | |||||  ||||||| |||||| | || || |||||||| |    
T  27043909 ggggcagctgcccgtatcactcctgctttagatgaagaagaaatgacccagacgttcttaaagaccttgaaaaaagattatgttgagaggatgatcatag 27044008  T
Q  122 ctgctccaaataacttctctgagatggtcaccatggggactcgtct 167  Q
    |||| || || ||||| || ||||||||||||||||| || |||||    
T  27044009 ctgccccgaacaacttttcggagatggtcaccatgggaacccgtct 27044054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 22 - 167
Target Start/End: Original strand, 29500925 - 29501070
Alignment:
Q  22 ggggcagctgcccgcatcactcccgatcttgacgaagaggagatgactcagacattcctgaagactctgaaaaaggattatatcgaaagaatgatcattg 121  Q
    |||||||||||||| |||||||| | | | || ||||| || ||||| ||||||||| | |||||  ||||||| |||||| | || || |||||||| |    
T  29500925 ggggcagctgcccgtatcactcctgctttagatgaagaagaaatgacccagacattcttaaagaccttgaaaaaagattatgttgagaggatgatcatcg 29501024  T
Q  122 ctgctccaaataacttctctgagatggtcaccatggggactcgtct 167  Q
    |||| || || ||||| || ||||||||||| ||||| || |||||    
T  29501025 ctgccccgaacaacttttcggagatggtcactatgggaacccgtct 29501070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 28 - 170
Target Start/End: Complemental strand, 27630380 - 27630238
Alignment:
Q  28 gctgcccgcatcactcccgatcttgacgaagaggagatgactcagacattcctgaagactctgaaaaaggattatatcgaaagaatgatcattgctgctc 127  Q
    |||||||| || ||||||| ||| || |||||||||||||| || || ||| |||| ||  |||| || || || || ||||| ||||| |||||||| |    
T  27630380 gctgcccgtattactcccgctctagaagaagaggagatgacccaaactttcttgaaaaccttgaagaaagactacattgaaaggatgattattgctgccc 27630281  T
Q  128 caaataacttctctgagatggtcaccatggggactcgtctaga 170  Q
    | |  ||||| ||||| ||||| || |||||||||||||||||    
T  27630280 ctagcaacttttctgaaatggtaactatggggactcgtctaga 27630238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 167
Target Start/End: Original strand, 4524808 - 4524953
Alignment:
Q  22 ggggcagctgcccgcatcactcccgatcttgacgaagaggagatgactcagacattcctgaagactctgaaaaaggattatatcgaaagaatgatcattg 121  Q
    |||||||||||||| |||||||| | | | || ||||| || ||||| ||||||||| | |||||  |||| ||||||||| | || || |||||||| |    
T  4524808 ggggcagctgcccgtatcactcctgctttagatgaagaagaaatgacccagacattcttaaagaccttgaagaaggattatgttgagaggatgatcatcg 4524907  T
Q  122 ctgctccaaataacttctctgagatggtcaccatggggactcgtct 167  Q
    | || || || ||||| || ||||||||||| ||||| || |||||    
T  4524908 ccgccccgaacaacttttcagagatggtcactatgggaacccgtct 4524953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 167
Target Start/End: Complemental strand, 4724820 - 4724675
Alignment:
Q  22 ggggcagctgcccgcatcactcccgatcttgacgaagaggagatgactcagacattcctgaagactctgaaaaaggattatatcgaaagaatgatcattg 121  Q
    |||||||||||||| |||||||| | | | || ||||| || ||||| ||||||||| | |||||  |||| || |||||| | || || |||||||| |    
T  4724820 ggggcagctgcccgtatcactcctgctttagatgaagaagaaatgacccagacattcttaaagaccttgaagaaagattatgttgagaggatgatcatcg 4724721  T
Q  122 ctgctccaaataacttctctgagatggtcaccatggggactcgtct 167  Q
    |||| || || ||||| || ||||||||||| ||||| || |||||    
T  4724720 ctgccccgaacaacttttcggagatggtcactatgggaacccgtct 4724675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 167
Target Start/End: Original strand, 4757280 - 4757425
Alignment:
Q  22 ggggcagctgcccgcatcactcccgatcttgacgaagaggagatgactcagacattcctgaagactctgaaaaaggattatatcgaaagaatgatcattg 121  Q
    |||||||||||||| |||||||| | | | || ||||| || ||||| ||||||||| | |||||  |||| ||||||||| | || || |||||||| |    
T  4757280 ggggcagctgcccgtatcactcctgctttagatgaagaagaaatgacccagacattcttaaagaccttgaagaaggattatgttgagaggatgatcatcg 4757379  T
Q  122 ctgctccaaataacttctctgagatggtcaccatggggactcgtct 167  Q
    | || || || ||||| || ||||||||||| ||||| || |||||    
T  4757380 ccgccccgaacaacttttcagagatggtcactatgggaacccgtct 4757425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 167
Target Start/End: Original strand, 17024781 - 17024926
Alignment:
Q  22 ggggcagctgcccgcatcactcccgatcttgacgaagaggagatgactcagacattcctgaagactctgaaaaaggattatatcgaaagaatgatcattg 121  Q
    |||||||||||||| ||||| || | | | || ||||| || ||||| ||||||||| | |||||  |||| || |||||| | || || |||||||| |    
T  17024781 ggggcagctgcccgtatcacccctgctttagatgaagaagaaatgacccagacattcttaaagaccttgaagaaagattatgttgagaggatgatcatcg 17024880  T
Q  122 ctgctccaaataacttctctgagatggtcaccatggggactcgtct 167  Q
    |||| || || ||||| || ||||||||||||||||| || |||||    
T  17024881 ctgccccgaacaacttttcggagatggtcaccatgggaacccgtct 17024926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 167
Target Start/End: Original strand, 29548997 - 29549142
Alignment:
Q  22 ggggcagctgcccgcatcactcccgatcttgacgaagaggagatgactcagacattcctgaagactctgaaaaaggattatatcgaaagaatgatcattg 121  Q
    |||| ||||||||| |||||||| | | | || ||||| || ||||| ||||||||| | |||||  |||| || |||||| | || || |||||||| |    
T  29548997 ggggaagctgcccgtatcactcctgctttagatgaagaagaaatgacccagacattcttaaagaccttgaagaaagattatgttgagaggatgatcatcg 29549096  T
Q  122 ctgctccaaataacttctctgagatggtcaccatggggactcgtct 167  Q
    |||| || || ||||| || ||||||||||||||||| || |||||    
T  29549097 ctgccccgaacaacttttcggagatggtcaccatgggaacccgtct 29549142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 210
Target Start/End: Complemental strand, 22935373 - 22935331
Alignment:
Q  168 agaaagttgaatcctctgtaaatgcatcaaagaggtacggtaa 210  Q
    |||||| |||||||||||| ||||||||||||||||| |||||    
T  22935373 agaaagctgaatcctctgtgaatgcatcaaagaggtatggtaa 22935331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 210
Target Start/End: Complemental strand, 23857818 - 23857776
Alignment:
Q  168 agaaagttgaatcctctgtaaatgcatcaaagaggtacggtaa 210  Q
    |||||| |||||||||||| ||||||||||||||||| |||||    
T  23857818 agaaagctgaatcctctgtgaatgcatcaaagaggtatggtaa 23857776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 210
Target Start/End: Complemental strand, 24305114 - 24305072
Alignment:
Q  168 agaaagttgaatcctctgtaaatgcatcaaagaggtacggtaa 210  Q
    |||||| |||||||||||| ||||||||||||||||| |||||    
T  24305114 agaaagctgaatcctctgtgaatgcatcaaagaggtatggtaa 24305072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 210
Target Start/End: Original strand, 24863417 - 24863459
Alignment:
Q  168 agaaagttgaatcctctgtaaatgcatcaaagaggtacggtaa 210  Q
    |||||| |||||||||||| ||||||||||||||||| |||||    
T  24863417 agaaagctgaatcctctgtgaatgcatcaaagaggtatggtaa 24863459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 210
Target Start/End: Original strand, 26999773 - 26999815
Alignment:
Q  168 agaaagttgaatcctctgtaaatgcatcaaagaggtacggtaa 210  Q
    |||||| |||||||||||| ||||||||||||||||| |||||    
T  26999773 agaaagctgaatcctctgtgaatgcatcaaagaggtatggtaa 26999815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 167
Target Start/End: Complemental strand, 27360696 - 27360542
Alignment:
Q  13 agatgaaggggggcagctgcccgcatcactcccgatcttgacgaagaggagatgactcagacattcctgaagactctgaaaaaggattatatcgaaagaa 112  Q
    ||||| || |||||||||||||| |||||||| | | | || ||||| || ||||| ||||||||| | |||||  |||| || |||||| | || || |    
T  27360696 agatggagaggggcagctgcccgtatcactcctgctttagatgaagaagaaatgacccagacattcttaaagaccttgaagaaagattatgttgagagga 27360597  T
Q  113 tgatcattgctgctccaaataacttctctgagatggtcaccatggggactcgtct 167  Q
    ||||||| || || || || ||||| || ||||||||||| ||||| || |||||    
T  27360596 tgatcatcgccgccccgaacaacttttcggagatggtcactatgggaacccgtct 27360542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 167
Target Start/End: Complemental strand, 27451039 - 27450885
Alignment:
Q  13 agatgaaggggggcagctgcccgcatcactcccgatcttgacgaagaggagatgactcagacattcctgaagactctgaaaaaggattatatcgaaagaa 112  Q
    ||||| || |||||||||||||| |||||||| | | | || ||||| || ||||| ||||||||| | |||||  |||| || |||||| | || || |    
T  27451039 agatggagaggggcagctgcccgtatcactcctgctttagatgaagaagaaatgacccagacattcttaaagaccttgaagaaagattatgttgagagga 27450940  T
Q  113 tgatcattgctgctccaaataacttctctgagatggtcaccatggggactcgtct 167  Q
    ||||||| || || || || ||||| || ||||||||||| ||||| || |||||    
T  27450939 tgatcatcgccgccccgaacaacttttcggagatggtcactatgggaacccgtct 27450885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 22 - 167
Target Start/End: Original strand, 4772516 - 4772661
Alignment:
Q  22 ggggcagctgcccgcatcactcccgatcttgacgaagaggagatgactcagacattcctgaagactctgaaaaaggattatatcgaaagaatgatcattg 121  Q
    |||||||||||||| |||||||| | | | || ||||| || ||||| ||||| ||| | |||||  |||| || |||||| | || || |||||||| |    
T  4772516 ggggcagctgcccgtatcactcctgctttagatgaagaagaaatgacccagacgttcttaaagaccttgaagaaagattatgttgagaggatgatcatcg 4772615  T
Q  122 ctgctccaaataacttctctgagatggtcaccatggggactcgtct 167  Q
    |||| || || ||||| || ||||||||||| ||||| || |||||    
T  4772616 ctgccccgaacaacttttcggagatggtcactatgggaacccgtct 4772661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 22 - 167
Target Start/End: Original strand, 16673646 - 16673791
Alignment:
Q  22 ggggcagctgcccgcatcactcccgatcttgacgaagaggagatgactcagacattcctgaagactctgaaaaaggattatatcgaaagaatgatcattg 121  Q
    |||||||||||||| |||||||| |   | || ||||| || ||||| ||||||||| | |||||  |||| || |||||| | || || |||||||| |    
T  16673646 ggggcagctgcccgtatcactcctgccttagatgaagaagaaatgacccagacattcttaaagaccttgaagaaagattatgttgagaggatgatcatcg 16673745  T
Q  122 ctgctccaaataacttctctgagatggtcaccatggggactcgtct 167  Q
    |||| || || ||||| || ||||||||||| ||||| || |||||    
T  16673746 ctgccccgaacaacttttcggagatggtcactatgggaacccgtct 16673791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 22 - 167
Target Start/End: Complemental strand, 26117096 - 26116951
Alignment:
Q  22 ggggcagctgcccgcatcactcccgatcttgacgaagaggagatgactcagacattcctgaagactctgaaaaaggattatatcgaaagaatgatcattg 121  Q
    |||||||||||||| || ||||| | | | || ||||| || ||||| ||||||||| | |||||  |||| || |||||| | || || |||||||| |    
T  26117096 ggggcagctgcccgtattactcctgctttagatgaagaagaaatgacccagacattcttaaagaccttgaagaaagattatgttgagaggatgatcatcg 26116997  T
Q  122 ctgctccaaataacttctctgagatggtcaccatggggactcgtct 167  Q
    |||| || || ||||| || ||||||||||| ||||| || |||||    
T  26116996 ctgccccgaacaacttttcggagatggtcactatgggaacccgtct 26116951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 22 - 167
Target Start/End: Complemental strand, 26778304 - 26778159
Alignment:
Q  22 ggggcagctgcccgcatcactcccgatcttgacgaagaggagatgactcagacattcctgaagactctgaaaaaggattatatcgaaagaatgatcattg 121  Q
    |||||||||||||| |||||||| | | | || ||||| || ||||| ||||| ||| | |||||  |||| || |||||| | || || |||||||| |    
T  26778304 ggggcagctgcccgtatcactcctgctttagatgaagaagaaatgacccagacgttcttaaagaccttgaagaaagattatgttgagaggatgatcatcg 26778205  T
Q  122 ctgctccaaataacttctctgagatggtcaccatggggactcgtct 167  Q
    |||| || || ||||| || ||||||||||| ||||| || |||||    
T  26778204 ctgccccgaacaacttttcggagatggtcactatgggaacccgtct 26778159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 22 - 167
Target Start/End: Original strand, 27007231 - 27007376
Alignment:
Q  22 ggggcagctgcccgcatcactcccgatcttgacgaagaggagatgactcagacattcctgaagactctgaaaaaggattatatcgaaagaatgatcattg 121  Q
    |||||||||||||| |||||||| | | | || ||||| || ||||| ||||||||| | |||||  |||| || |||||| | || || |||||||| |    
T  27007231 ggggcagctgcccgtatcactcctgctttagatgaagaagaaatgacccagacattcttaaagaccttgaagaaagattatgttgagaggatgatcatcg 27007330  T
Q  122 ctgctccaaataacttctctgagatggtcaccatggggactcgtct 167  Q
    | || || || ||||| || ||||||||||| ||||| || |||||    
T  27007331 ccgccccgaacaacttttcggagatggtcactatgggaacccgtct 27007376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 22 - 167
Target Start/End: Complemental strand, 34464038 - 34463893
Alignment:
Q  22 ggggcagctgcccgcatcactcccgatcttgacgaagaggagatgactcagacattcctgaagactctgaaaaaggattatatcgaaagaatgatcattg 121  Q
    |||||||||||||| |||||||| | | | || ||||| || ||||| ||||||||| | || ||  |||| || |||||| | || || |||||||| |    
T  34464038 ggggcagctgcccgtatcactcctgctttagatgaagaagaaatgacccagacattcttaaaaaccttgaagaaagattatgttgagaggatgatcatcg 34463939  T
Q  122 ctgctccaaataacttctctgagatggtcaccatggggactcgtct 167  Q
    |||| || || ||||| || ||||||||||| ||||| || |||||    
T  34463938 ctgccccgaacaacttttcggagatggtcactatgggaacccgtct 34463893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 92; Significance: 7e-45; HSPs: 1)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 19 - 158
Target Start/End: Original strand, 21086 - 21225
Alignment:
Q  19 aggggggcagctgcccgcatcactcccgatcttgacgaagaggagatgactcagacattcctgaagactctgaaaaaggattatatcgaaagaatgatca 118  Q
    |||||||||||||||||  | |||||   |||| | |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  21086 aggggggcagctgcccgtgttactcctactcttaatgaagaggagatgactcagacattcctgaagactctgaaaaaggattatgtcgaaagaatgatca 21185  T
Q  119 ttgctgctccaaataacttctctgagatggtcaccatggg 158  Q
    | |||||||||| | |||||||||||||||||||||||||    
T  21186 tcgctgctccaagtgacttctctgagatggtcaccatggg 21225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0089 (Bit Score: 88; Significance: 2e-42; HSPs: 5)
Name: scaffold0089
Description:

Target: scaffold0089; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 12 - 167
Target Start/End: Original strand, 29275 - 29430
Alignment:
Q  12 gagatgaaggggggcagctgcccgcatcactcccgatcttgacgaagaggagatgactcagacattcctgaagactctgaaaaaggattatatcgaaaga 111  Q
    |||||| |||||||||||||||||||| ||||||| |||||| ||||| || ||||| ||||||||||| |||||  |||||||||||||| | || |||    
T  29275 gagatggaggggggcagctgcccgcattactcccgctcttgatgaagaagaaatgacccagacattcctaaagaccttgaaaaaggattatgttgagaga 29374  T
Q  112 atgatcattgctgctccaaataacttctctgagatggtcaccatggggactcgtct 167  Q
    |||||||||||||| || ||||||||||| ||||||||||||||||| ||||||||    
T  29375 atgatcattgctgccccgaataacttctcggagatggtcaccatgggaactcgtct 29430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0089; HSP #2
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 12 - 167
Target Start/End: Complemental strand, 40813 - 40658
Alignment:
Q  12 gagatgaaggggggcagctgcccgcatcactcccgatcttgacgaagaggagatgactcagacattcctgaagactctgaaaaaggattatatcgaaaga 111  Q
    |||||| |||||||||||||||||||| ||||||| |||||| ||||| || ||||| ||||||||||| |||||  |||||||||||||| | || |||    
T  40813 gagatggaggggggcagctgcccgcattactcccgctcttgatgaagaagaaatgacccagacattcctaaagaccttgaaaaaggattatgttgagaga 40714  T
Q  112 atgatcattgctgctccaaataacttctctgagatggtcaccatggggactcgtct 167  Q
    |||||||||||||| || ||||||||||| ||||||||||||||||| ||||||||    
T  40713 atgatcattgctgccccgaataacttctcggagatggtcaccatgggaactcgtct 40658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0089; HSP #3
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 12 - 167
Target Start/End: Complemental strand, 47729 - 47574
Alignment:
Q  12 gagatgaaggggggcagctgcccgcatcactcccgatcttgacgaagaggagatgactcagacattcctgaagactctgaaaaaggattatatcgaaaga 111  Q
    |||||| |||||||||||||||||||| ||||||| |||||| ||||| || ||||| ||||||||| | |||||  |||| ||||||||| | || |||    
T  47729 gagatggaggggggcagctgcccgcattactcccgctcttgatgaagaagaaatgacccagacattcttaaagaccttgaagaaggattatgttgagaga 47630  T
Q  112 atgatcattgctgctccaaataacttctctgagatggtcaccatggggactcgtct 167  Q
    |||||||||||||| || |||||||| || ||||||||||||||||| || |||||    
T  47629 atgatcattgctgccccgaataacttttcggagatggtcaccatgggaacccgtct 47574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0089; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 210
Target Start/End: Complemental strand, 40622 - 40580
Alignment:
Q  168 agaaagttgaatcctctgtaaatgcatcaaagaggtacggtaa 210  Q
    |||||| |||||||||||| ||||||||||||||||| |||||    
T  40622 agaaagctgaatcctctgtgaatgcatcaaagaggtatggtaa 40580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0089; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 210
Target Start/End: Original strand, 29468 - 29508
Alignment:
Q  170 aaagttgaatcctctgtaaatgcatcaaagaggtacggtaa 210  Q
    |||| |||||||||||| ||||||||||||||||| |||||    
T  29468 aaagctgaatcctctgtgaatgcatcaaagaggtatggtaa 29508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 87; Significance: 7e-42; HSPs: 21)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 12 - 158
Target Start/End: Complemental strand, 22081575 - 22081429
Alignment:
Q  12 gagatgaaggggggcagctgcccgcatcactcccgatcttgacgaagaggagatgactcagacattcctgaagactctgaaaaaggattatatcgaaaga 111  Q
    |||||| |||||||| ||||||||  | |||||   |||| | ||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||    
T  22081575 gagatggaggggggcggctgcccgtgttactcctactcttaatgaagaggagatgactcagacattcctgaagactttgaaaaaggattatgtcgaaaga 22081476  T
Q  112 atgatcattgctgctccaaataacttctctgagatggtcaccatggg 158  Q
    |||||||| |||||||||| | |||||||||||||||||||||||||    
T  22081475 atgatcatcgctgctccaagtgacttctctgagatggtcaccatggg 22081429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 12 - 167
Target Start/End: Complemental strand, 2137962 - 2137807
Alignment:
Q  12 gagatgaaggggggcagctgcccgcatcactcccgatcttgacgaagaggagatgactcagacattcctgaagactctgaaaaaggattatatcgaaaga 111  Q
    |||||| |||||||||||||||||||| ||||||| |||||| ||||| || ||||| ||||||||| | |||||  |||||||||||||| | || |||    
T  2137962 gagatggaggggggcagctgcccgcattactcccgctcttgatgaagaagaaatgacccagacattcttaaagaccttgaaaaaggattatgttgagaga 2137863  T
Q  112 atgatcattgctgctccaaataacttctctgagatggtcaccatggggactcgtct 167  Q
    |||||||||||||| || |||||||| || ||||||||||||||||| || |||||    
T  2137862 atgatcattgctgccccgaataacttttcggagatggtcaccatgggaacccgtct 2137807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 12 - 167
Target Start/End: Original strand, 14557139 - 14557294
Alignment:
Q  12 gagatgaaggggggcagctgcccgcatcactcccgatcttgacgaagaggagatgactcagacattcctgaagactctgaaaaaggattatatcgaaaga 111  Q
    |||||| ||||||||||||||||| || ||||||| |||||| ||||| || ||||| ||||||||| | |||||  |||||||||||||| | || |||    
T  14557139 gagatggaggggggcagctgcccgtattactcccgctcttgatgaagaagaaatgacccagacattcttaaagaccttgaaaaaggattatgttgagaga 14557238  T
Q  112 atgatcattgctgctccaaataacttctctgagatggtcaccatggggactcgtct 167  Q
    |||||||||||||| || |||||||| || ||||||||||||||||| ||||||||    
T  14557239 atgatcattgctgccccgaataacttttcggagatggtcaccatgggaactcgtct 14557294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 12 - 167
Target Start/End: Original strand, 16277066 - 16277221
Alignment:
Q  12 gagatgaaggggggcagctgcccgcatcactcccgatcttgacgaagaggagatgactcagacattcctgaagactctgaaaaaggattatatcgaaaga 111  Q
    |||||| |||||||||||||||||||| ||||||| |||||| ||||| || ||||| ||||||||| | |||||  |||||||||||||| | || |||    
T  16277066 gagatggaggggggcagctgcccgcattactcccgctcttgatgaagaagaaatgacccagacattcttaaagaccttgaaaaaggattatgttgagaga 16277165  T
Q  112 atgatcattgctgctccaaataacttctctgagatggtcaccatggggactcgtct 167  Q
    |||||||| ||||| || |||||||| || ||||||||||||||||| ||||||||    
T  16277166 atgatcatcgctgccccgaataacttttcggagatggtcaccatgggaactcgtct 16277221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 12 - 167
Target Start/End: Original strand, 19687610 - 19687765
Alignment:
Q  12 gagatgaaggggggcagctgcccgcatcactcccgatcttgacgaagaggagatgactcagacattcctgaagactctgaaaaaggattatatcgaaaga 111  Q
    |||||| |||||||||||||||||||| ||||||| |||||| ||||| || ||||| ||||||||| | |||||  |||||||||||||| | || |||    
T  19687610 gagatggaggggggcagctgcccgcattactcccgctcttgatgaagaagaaatgacccagacattcttaaagaccttgaaaaaggattatgttgagaga 19687709  T
Q  112 atgatcattgctgctccaaataacttctctgagatggtcaccatggggactcgtct 167  Q
    |||||||||||||| || |||||||| || ||||||||||||||||| || |||||    
T  19687710 atgatcattgctgccccgaataacttttcggagatggtcaccatgggaacccgtct 19687765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 20 - 167
Target Start/End: Original strand, 16282970 - 16283116
Alignment:
Q  20 ggggggcagctgcccgcatcactcccgatcttgacgaagaggagatgactcagacattcctgaagactctgaaaaaggattatatcgaaagaatgatcat 119  Q
    ||||||||||| ||||||| ||||||| |||||| ||||| || ||||| ||||||||||| |||||| |||||| ||||||| | || |||||||||||    
T  16282970 ggggggcagcttcccgcattactcccgctcttgatgaagaagaaatgacccagacattcctaaagactttgaaaa-ggattatgttgagagaatgatcat 16283068  T
Q  120 tgctgctccaaataacttctctgagatggtcaccatggggactcgtct 167  Q
     ||||| || ||||||||||| ||||||||||||||||| ||||||||    
T  16283069 cgctgccccgaataacttctcggagatggtcaccatgggaactcgtct 16283116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 12 - 167
Target Start/End: Complemental strand, 27609608 - 27609453
Alignment:
Q  12 gagatgaaggggggcagctgcccgcatcactcccgatcttgacgaagaggagatgactcagacattcctgaagactctgaaaaaggattatatcgaaaga 111  Q
    |||||| ||||| ||||||||||| || ||||| | |||||| ||||| || ||||| ||||||||| | || ||  |||| || |||||| | || |||    
T  27609608 gagatggaggggagcagctgcccgtattactcctgctcttgatgaagaagaaatgacccagacattcttaaaaaccttgaagaaagattatgttgagaga 27609509  T
Q  112 atgatcattgctgctccaaataacttctctgagatggtcaccatggggactcgtct 167  Q
    |||||||||||||| || |||||||| || ||||||||||||||||| ||||||||    
T  27609508 atgatcattgctgccccgaataacttttcggagatggtcaccatgggaactcgtct 27609453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 22 - 167
Target Start/End: Original strand, 19673960 - 19674105
Alignment:
Q  22 ggggcagctgcccgcatcactcccgatcttgacgaagaggagatgactcagacattcctgaagactctgaaaaaggattatatcgaaagaatgatcattg 121  Q
    |||||||||||||| |||||||| | | | || ||||| || ||||| ||||||||| | |||||  |||||||||||||| | || ||||||||||| |    
T  19673960 ggggcagctgcccgtatcactcctgctttagatgaagaagaaatgacccagacattcttaaagaccttgaaaaaggattatgttgagagaatgatcatcg 19674059  T
Q  122 ctgctccaaataacttctctgagatggtcaccatggggactcgtct 167  Q
    |||| || |||||||| || ||||||||||||||||| || |||||    
T  19674060 ctgccccgaataacttttcggagatggtcaccatgggaacccgtct 19674105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 22 - 167
Target Start/End: Complemental strand, 12093426 - 12093281
Alignment:
Q  22 ggggcagctgcccgcatcactcccgatcttgacgaagaggagatgactcagacattcctgaagactctgaaaaaggattatatcgaaagaatgatcattg 121  Q
    |||||||||||||| |||||||| | | | || ||||| || ||||| ||||| ||| | |||||  |||| || |||||| | || |||||||||||||    
T  12093426 ggggcagctgcccgtatcactcctgctttagatgaagaagaaatgacccagacgttcttaaagaccttgaagaaagattatgttgagagaatgatcattg 12093327  T
Q  122 ctgctccaaataacttctctgagatggtcaccatggggactcgtct 167  Q
    |||| || || ||||| || ||||||||||||||||| || |||||    
T  12093326 ctgccccgaacaacttttcggagatggtcaccatgggaacccgtct 12093281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 22 - 167
Target Start/End: Original strand, 18710108 - 18710253
Alignment:
Q  22 ggggcagctgcccgcatcactcccgatcttgacgaagaggagatgactcagacattcctgaagactctgaaaaaggattatatcgaaagaatgatcattg 121  Q
    |||||||||||||| |||||||| | | | || ||||| || ||||| ||||| ||| | |||||  |||| ||||||||| | || ||||||||||| |    
T  18710108 ggggcagctgcccgtatcactcctgctttagatgaagaagaaatgacccagacgttcttaaagaccttgaagaaggattatgttgagagaatgatcatcg 18710207  T
Q  122 ctgctccaaataacttctctgagatggtcaccatggggactcgtct 167  Q
    |||| || || ||||| || ||||||||||||||||| || |||||    
T  18710208 ctgccccgaacaacttttcggagatggtcaccatgggaacccgtct 18710253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 22 - 167
Target Start/End: Complemental strand, 19279179 - 19279034
Alignment:
Q  22 ggggcagctgcccgcatcactcccgatcttgacgaagaggagatgactcagacattcctgaagactctgaaaaaggattatatcgaaagaatgatcattg 121  Q
    |||||||||||||| |||||||| | | | || ||||| || ||||| ||||||||| | |||||  |||| || |||||| | || || |||||||| |    
T  19279179 ggggcagctgcccgtatcactcctgctttagatgaagaagaaatgacccagacattcttaaagaccttgaagaaagattatgttgagaggatgatcatcg 19279080  T
Q  122 ctgctccaaataacttctctgagatggtcaccatggggactcgtct 167  Q
    |||| ||||| ||||| || ||||||||||| ||||| || |||||    
T  19279079 ctgccccaaacaacttttcggagatggtcactatgggaacccgtct 19279034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 22 - 167
Target Start/End: Complemental strand, 19518836 - 19518691
Alignment:
Q  22 ggggcagctgcccgcatcactcccgatcttgacgaagaggagatgactcagacattcctgaagactctgaaaaaggattatatcgaaagaatgatcattg 121  Q
    |||||||||||||| |||||||| | | | || ||||| || ||||| ||||||||| | |||||  |||| || |||||| | || || |||||||| |    
T  19518836 ggggcagctgcccgtatcactcctgctttagatgaagaagaaatgacccagacattcttaaagaccttgaagaaagattatgttgagaggatgatcatcg 19518737  T
Q  122 ctgctccaaataacttctctgagatggtcaccatggggactcgtct 167  Q
    |||| ||||| ||||| || ||||||||||| ||||| || |||||    
T  19518736 ctgccccaaacaacttttcggagatggtcactatgggaacccgtct 19518691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 13 - 167
Target Start/End: Original strand, 31354037 - 31354191
Alignment:
Q  13 agatgaaggggggcagctgcccgcatcactcccgatcttgacgaagaggagatgactcagacattcctgaagactctgaaaaaggattatatcgaaagaa 112  Q
    ||||| || |||||||||||||| |||||||| | | | || || || || ||||| ||||||||| | |||||  |||| ||||||||| | || || |    
T  31354037 agatggagaggggcagctgcccgtatcactcctgctttagatgaggaagaaatgacccagacattcttaaagaccttgaagaaggattatgttgagagga 31354136  T
Q  113 tgatcattgctgctccaaataacttctctgagatggtcaccatggggactcgtct 167  Q
    ||||||| ||||| || || ||||| || ||||||||||| ||||| || |||||    
T  31354137 tgatcatcgctgccccgaacaacttttcggagatggtcactatgggaacccgtct 31354191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 167
Target Start/End: Complemental strand, 3330212 - 3330067
Alignment:
Q  22 ggggcagctgcccgcatcactcccgatcttgacgaagaggagatgactcagacattcctgaagactctgaaaaaggattatatcgaaagaatgatcattg 121  Q
    |||||||||||||| |||||||| | | | || ||||| || ||||| ||||||||| | |||||  |||| || |||||| | || || |||||||| |    
T  3330212 ggggcagctgcccgtatcactcctgctttagatgaagaagaaatgacccagacattcttaaagaccttgaagaaagattatgttgagaggatgatcatcg 3330113  T
Q  122 ctgctccaaataacttctctgagatggtcaccatggggactcgtct 167  Q
    | || || || ||||| || ||||||||||| ||||| ||||||||    
T  3330112 ccgccccgaacaacttttcggagatggtcactatgggaactcgtct 3330067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 210
Target Start/End: Complemental strand, 2137771 - 2137729
Alignment:
Q  168 agaaagttgaatcctctgtaaatgcatcaaagaggtacggtaa 210  Q
    |||||| |||||||||||| ||||||||||||||||| |||||    
T  2137771 agaaagctgaatcctctgtgaatgcatcaaagaggtatggtaa 2137729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 210
Target Start/End: Original strand, 14557330 - 14557372
Alignment:
Q  168 agaaagttgaatcctctgtaaatgcatcaaagaggtacggtaa 210  Q
    |||||| |||||||||||| ||||||||||||||||| |||||    
T  14557330 agaaagctgaatcctctgtgaatgcatcaaagaggtatggtaa 14557372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 210
Target Start/End: Original strand, 16277257 - 16277299
Alignment:
Q  168 agaaagttgaatcctctgtaaatgcatcaaagaggtacggtaa 210  Q
    |||||| |||||||||||| ||||||||||||||||| |||||    
T  16277257 agaaagctgaatcctctgtgaatgcatcaaagaggtatggtaa 16277299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 210
Target Start/End: Original strand, 16283152 - 16283194
Alignment:
Q  168 agaaagttgaatcctctgtaaatgcatcaaagaggtacggtaa 210  Q
    |||||| |||||||||||| ||||||||||||||||| |||||    
T  16283152 agaaagctgaatcctctgtgaatgcatcaaagaggtatggtaa 16283194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 210
Target Start/End: Original strand, 19687801 - 19687843
Alignment:
Q  168 agaaagttgaatcctctgtaaatgcatcaaagaggtacggtaa 210  Q
    |||||| |||||||||||| ||||||||||||||||| |||||    
T  19687801 agaaagctgaatcctctgtgaatgcatcaaagaggtatggtaa 19687843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 22 - 167
Target Start/End: Original strand, 19285987 - 19286132
Alignment:
Q  22 ggggcagctgcccgcatcactcccgatcttgacgaagaggagatgactcagacattcctgaagactctgaaaaaggattatatcgaaagaatgatcattg 121  Q
    |||||||||||||| |||||||| | | | || ||||| || ||||| ||||| ||| | |||||  |||| || |||||| | || || |||||||| |    
T  19285987 ggggcagctgcccgtatcactcctgctttagatgaagaagaaatgacccagacgttcttaaagaccttgaagaaagattatgttgagaggatgatcatcg 19286086  T
Q  122 ctgctccaaataacttctctgagatggtcaccatggggactcgtct 167  Q
    |||| || || ||||| || ||||||||||| ||||| || |||||    
T  19286087 ctgccccgaacaacttttcggagatggtcactatgggaacccgtct 19286132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 22 - 167
Target Start/End: Original strand, 29828835 - 29828980
Alignment:
Q  22 ggggcagctgcccgcatcactcccgatcttgacgaagaggagatgactcagacattcctgaagactctgaaaaaggattatatcgaaagaatgatcattg 121  Q
    |||||||||||||| || ||||| | | | || ||||| || ||||| ||||||||| | |||||  |||| || |||||| | || || |||||||| |    
T  29828835 ggggcagctgcccgtattactcctgctttagatgaagaagaaatgacccagacattcttaaagaccttgaagaaagattatgttgagaggatgatcatcg 29828934  T
Q  122 ctgctccaaataacttctctgagatggtcaccatggggactcgtct 167  Q
    |||| || || ||||| || ||||||||||| ||||| || |||||    
T  29828935 ctgccccgaacaacttttcggagatggtcactatgggaacccgtct 29828980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 68; Significance: 1e-30; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 12 - 167
Target Start/End: Complemental strand, 874 - 719
Alignment:
Q  12 gagatgaaggggggcagctgcccgcatcactcccgatcttgacgaagaggagatgactcagacattcctgaagactctgaaaaaggattatatcgaaaga 111  Q
    |||||| || ||||||||||||||||| ||||||| |||||| ||||| || ||||| ||||||||| | |||||  |||| ||||||||| | || |||    
T  874 gagatggagaggggcagctgcccgcattactcccgctcttgatgaagaagaaatgacccagacattcttaaagaccttgaagaaggattatgttgagaga 775  T
Q  112 atgatcattgctgctccaaataacttctctgagatggtcaccatggggactcgtct 167  Q
    |||||||||||||| || |||||||| || ||||||||||||||||| || |||||    
T  774 atgatcattgctgccccgaataacttttcggagatggtcaccatgggaacccgtct 719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0143 (Bit Score: 64; Significance: 4e-28; HSPs: 2)
Name: scaffold0143
Description:

Target: scaffold0143; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 12 - 167
Target Start/End: Original strand, 26804 - 26959
Alignment:
Q  12 gagatgaaggggggcagctgcccgcatcactcccgatcttgacgaagaggagatgactcagacattcctgaagactctgaaaaaggattatatcgaaaga 111  Q
    |||||| |||||||||||||| ||||| ||||||| |||||| ||||| || ||||| ||||||||| | |||||  |||| ||||||||| | || |||    
T  26804 gagatggaggggggcagctgctcgcattactcccgctcttgatgaagaagaaatgacccagacattcttaaagaccttgaagaaggattatgttgagaga 26903  T
Q  112 atgatcattgctgctccaaataacttctctgagatggtcaccatggggactcgtct 167  Q
    |||||||||||| | || || ||||| || ||||||||||||||||| ||||||||    
T  26904 atgatcattgcttccccgaacaacttttcggagatggtcaccatgggaactcgtct 26959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0143; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 210
Target Start/End: Original strand, 26995 - 27037
Alignment:
Q  168 agaaagttgaatcctctgtaaatgcatcaaagaggtacggtaa 210  Q
    |||||| |||||||||||| ||||||||||||||||| |||||    
T  26995 agaaagctgaatcctctgtgaatgcatcaaagaggtatggtaa 27037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 22 - 167
Target Start/End: Original strand, 7459 - 7604
Alignment:
Q  22 ggggcagctgcccgcatcactcccgatcttgacgaagaggagatgactcagacattcctgaagactctgaaaaaggattatatcgaaagaatgatcattg 121  Q
    |||||||||||||| |||||||| | | | || ||||| || ||||| ||||| ||| | |||||  |||| || |||||| | || |||||||||||||    
T  7459 ggggcagctgcccgtatcactcctgctttagatgaagaagaaatgacccagacgttcttaaagaccttgaagaaagattatgttgagagaatgatcattg 7558  T
Q  122 ctgctccaaataacttctctgagatggtcaccatggggactcgtct 167  Q
    |||| || || ||||| || ||||||||||||||||| || |||||    
T  7559 ctgccccgaacaacttttcggagatggtcaccatgggaacccgtct 7604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0099 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0099
Description:

Target: scaffold0099; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 91 - 167
Target Start/End: Complemental strand, 48822 - 48744
Alignment:
Q  91 aaaaaggattatatcgaa-agaatgatcattgctgctcca-aataacttctctgagatggtcaccatggggactcgtct 167  Q
    |||||||||||| | ||| ||||||||||||||||| ||  ||||||||||| ||||||||||||||||| ||||||||    
T  48822 aaaaaggattatgttgaagagaatgatcattgctgcccccgaataacttctcggagatggtcaccatgggaactcgtct 48744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0336 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0336
Description:

Target: scaffold0336; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 167
Target Start/End: Original strand, 7754 - 7899
Alignment:
Q  22 ggggcagctgcccgcatcactcccgatcttgacgaagaggagatgactcagacattcctgaagactctgaaaaaggattatatcgaaagaatgatcattg 121  Q
    |||||||||||||| |||||||| | | | || ||||| || ||||| ||||| ||| | |||||  |||| || |||||| | || || |||||||| |    
T  7754 ggggcagctgcccgtatcactcctgctttagatgaagaagaaatgacccagacgttcttaaagaccttgaagaaagattatgttgagaggatgatcatcg 7853  T
Q  122 ctgctccaaataacttctctgagatggtcaccatggggactcgtct 167  Q
    |||| || || ||||| || ||||||||||||||||| || |||||    
T  7854 ctgccccgaacaacttttcggagatggtcaccatgggaacccgtct 7899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0144 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0144
Description:

Target: scaffold0144; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 22 - 167
Target Start/End: Complemental strand, 26936 - 26791
Alignment:
Q  22 ggggcagctgcccgcatcactcccgatcttgacgaagaggagatgactcagacattcctgaagactctgaaaaaggattatatcgaaagaatgatcattg 121  Q
    ||||| |||||||| |||||||| | | | || || || || ||||| ||||||||| | |||||  |||| || |||||| | || || |||||||| |    
T  26936 ggggcggctgcccgtatcactcctgctttagatgaggaagaaatgacccagacattcttaaagacgttgaagaaagattatgttgagaggatgatcatcg 26837  T
Q  122 ctgctccaaataacttctctgagatggtcaccatggggactcgtct 167  Q
    |||| || || ||||| || ||||||||||||||||| || |||||    
T  26836 ctgccccgaacaacttttcggagatggtcaccatgggaacccgtct 26791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University