View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11932_high_76 (Length: 242)
Name: NF11932_high_76
Description: NF11932
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11932_high_76 |
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Alignment Details
Target: chr8 (Bit Score: 218; Significance: 1e-120; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 43963196 - 43962971
Alignment:
| Q |
1 |
actaagttcacagaaaacaccaatcacagcaataacaaccttgggatcagaactttctaaattctcaaccaaccttttgaaacaaaccctaacagcatca |
100 |
Q |
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| T |
43963196 |
actaagttcacagaaaacaccaatcacggcaataacaaccttgggatcagaactttctaaattctcaaccaaccttttgaaacaaaccctaacagcatca |
43963097 |
T |
|
| Q |
101 |
ggatacttatcaaaaaccctcaaaacaacagcaatagctttattcctaataaaaaccctagaagacgataacaaattgaagatatcaggagtgagatcac |
200 |
Q |
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|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43963096 |
gggtacttatcaaaaaccctcaaaacaacagcaatagctttattcctaataaaaaccctagaagacgataacaaattgaagatatcaggagtgagatcac |
43962997 |
T |
|
| Q |
201 |
gtgcgaggtcgagagtggcgattgtg |
226 |
Q |
| |
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|||||||||||||||||||||||||| |
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| T |
43962996 |
gtgcgaggtcgagagtggcgattgtg |
43962971 |
T |
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