View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11932_low_34 (Length: 430)

Name: NF11932_low_34
Description: NF11932
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11932_low_34
NF11932_low_34
[»] chr7 (14 HSPs)
chr7 (109-409)||(8600971-8601267)
chr7 (43-413)||(8608847-8609217)
chr7 (33-413)||(8383747-8384127)
chr7 (40-409)||(8544560-8544929)
chr7 (39-409)||(8569237-8569607)
chr7 (72-410)||(8580656-8580994)
chr7 (165-411)||(8589690-8589936)
chr7 (245-409)||(29582716-29582880)
chr7 (245-413)||(8537168-8537336)
chr7 (231-385)||(8575417-8575571)
chr7 (88-409)||(7878605-7878926)
chr7 (225-406)||(29578550-29578731)
chr7 (15-119)||(8575202-8575305)
chr7 (43-89)||(8600926-8600972)
[»] chr8 (1 HSPs)
chr8 (34-413)||(12527425-12527804)
[»] chr6 (4 HSPs)
chr6 (323-391)||(11195927-11195995)
chr6 (323-391)||(11275143-11275211)
chr6 (323-406)||(11132198-11132281)
chr6 (323-397)||(11208581-11208655)


Alignment Details
Target: chr7 (Bit Score: 248; Significance: 1e-137; HSPs: 14)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 248; E-Value: 1e-137
Query Start/End: Original strand, 109 - 409
Target Start/End: Original strand, 8600971 - 8601267
Alignment:
Q  109 tctcaagctccctctgaaattccacaaacataaatgcttcttgatgctgtttttcatcaatcaatttctttccctttatcattgcagagttgatcttcat 208  Q
    |||||||||||||| |||| ||| ||||    |||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  8600971 tctcaagctccctcagaaagtcctcaaa----aatgcttcatgatgctgtttttcatcaatcaatttcattccctttatcattgcagagttgatcttcat 8601066  T
Q  209 tctttctattgaagtaagcatggaactaacaccatcatccttcattacttttctcatattgtaaagataatcatccagatcattcattgctttaacttta 308  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||     
T  8601067 tctttctattgaagtaagcatggaactaacactatcatccttcattacttttctcatagtgtaaagataatcatccagatcattcattgctttaactttc 8601166  T
Q  309 ttcttgaacttcaagtcttcatctttgaaattctcagcttcttggatcattctctcaatttcttcggttgatagtcttcccttttcattcgttattgtaa 408  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8601167 ttcttgaacttcatgtcttcatctttgaaattctcagcttcttggatcattctctcaatttcttcggttgatagtcttcccttttcattcgttattgtaa 8601266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 43 - 413
Target Start/End: Original strand, 8608847 - 8609217
Alignment:
Q  43 aatcagaatcactttactcatcagagtaacctttattgatcttcttcaaagatgattcaaatatgctctcaagctccctctgaaattccacaaacataaa 142  Q
    ||||||||||||||| ||||||||||||||||||||| ||||| |||||||  |||||||||||  ||||||||||| || |||| |||||||||| |||    
T  8608847 aatcagaatcactttcctcatcagagtaacctttattaatcttgttcaaagcagattcaaatatcttctcaagctccttcagaaagtccacaaacacaaa 8608946  T
Q  143 tgcttcttgatgctgtttttcatcaatcaatttctttccctttatcattgcagagttgatcttcattctttctattgaagtaagcatggaactaacacca 242  Q
    || ||| || |||| ||| ||||||||||| |||||||| |||||||||||||  |||| ||||||| | ||  | || |||||||||||| ||||||      
T  8608947 tgtttcatgttgctctttgtcatcaatcaaattctttccttttatcattgcagcattgagcttcattttgtcagtagaggtaagcatggaagtaacactc 8609046  T
Q  243 tcatccttcattacttttctcatattgtaaagataatcatccagatcattcattgctttaactttattcttgaacttcaagtcttcatctttgaaattct 342  Q
     |||||||||||||||| | ||| |||||||| |||||||||| | ||||||||||||||||||| || || |||||||||||||| |||||||||||||    
T  8609047 ccatccttcattactttccgcatgttgtaaaggtaatcatccaaaacattcattgctttaactttctttttaaacttcaagtcttcctctttgaaattct 8609146  T
Q  343 cagcttcttggatcattctctcaatttcttcggttgatagtcttcccttttcattcgttattgtaatatct 413  Q
    |||||||||| |||||||||||||||||||| ||||| ||||  || ||||| || ||||| |||||||||    
T  8609147 cagcttcttgaatcattctctcaatttcttcagttgaaagtcgaccattttcctttgttatagtaatatct 8609217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 33 - 413
Target Start/End: Complemental strand, 8384127 - 8383747
Alignment:
Q  33 gatcaataagaatcagaatcactttactcatcagagtaacctttattgatcttcttcaaagatgattcaaatatgctctcaagctccctctgaaattcca 132  Q
    ||||| ||||||||||||||||||| |||||||||| ||||  | | |||||| || |||   |||||||| ||||||||||||||| || |||| ||||    
T  8384127 gatcactaagaatcagaatcactttcctcatcagagcaaccaatttggatcttgtttaaaacagattcaaagatgctctcaagctccatcagaaagtcca 8384028  T
Q  133 caaacataaatgcttcttgatgctgtttttcatcaatcaatttctttccctttatcattgcagagttgatcttcattctttctattgaagtaagcatgga 232  Q
    |||| | ||||| |||||  ||||  ||  ||||||||||  | || ||||| ||||| ||||| |||||||| ||| | |||||||   | ||||| ||    
T  8384027 caaatacaaatgtttctttgtgcttgttaccatcaatcaaccttttccccttcatcatagcagaattgatctttattttgtctattgggttgagcattga 8383928  T
Q  233 actaacaccatcatccttcattacttttctcatattgtaaagataatcatccagatcattcattgctttaactttattcttgaacttcaagtcttcatct 332  Q
    | |||||| |||||| ||||||||||| ||||| |||||||||||||| |||| | ||||||||||||||||||| ||| | ||||||| ||||||| |     
T  8383927 agtaacactatcatctttcattactttcctcatgttgtaaagataatcgtccaaagcattcattgctttaactttcttcataaacttcatgtcttcagcc 8383828  T
Q  333 ttgaaattctcagcttcttggatcattctctcaatttcttcggttgatagtcttcccttttcattcgttattgtaatatct 413  Q
    ||||||||||| || ||||||||||||||||||||||| || |||||||  ||||| ||||||||| ||||||||||||||    
T  8383827 ttgaaattctctgcctcttggatcattctctcaatttcatcagttgataaacttccattttcattctttattgtaatatct 8383747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 40 - 409
Target Start/End: Original strand, 8544560 - 8544929
Alignment:
Q  40 aagaatcagaatcactttactcatcagagtaacctttattgatcttcttcaaagatgattcaaatatgctctcaagctccctctgaaattccacaaacat 139  Q
    |||||||  ||||||||| | ||||||| |||||||  |||||||| ||||  || |||||||| ||||||||||||||| ||  ||| ||||||||||     
T  8544560 aagaatccaaatcactttccccatcagattaaccttggttgatcttgttcatggaagattcaaagatgctctcaagctccttcaaaaagtccacaaacac 8544659  T
Q  140 aaatgcttcttgatgctgtttttcatcaatcaatttctttccctttatcattgcagagttgatcttcattctttctattgaagtaagcatggaactaaca 239  Q
    |||||| ||||  || || || | |||||||||  | |||||||||||||||||||| ||||| |||||| | ||||  |  |  ||| ||||| |||||    
T  8544660 aaatgcatcttcctgttggttgttatcaatcaaactttttccctttatcattgcagaattgatattcattttgtctacaggggcgagcttggaattaaca 8544759  T
Q  240 ccatcatccttcattacttttctcatattgtaaagataatcatccagatcattcattgctttaactttattcttgaacttcaagtcttcatctttgaaat 339  Q
    | |||||||||||||||||| |||| ||||||||||||||  |||| | ||||  |||||| |||||| ||  ||||||||| ||||| | | |||||||    
T  8544760 caatcatccttcattactttcctcacattgtaaagataatactccaaagcatttcttgcttcaactttttttctgaacttcatgtcttgagccttgaaat 8544859  T
Q  340 tctcagcttcttggatcattctctcaatttcttcggttgatagtcttcccttttcattcgttattgtaat 409  Q
    | |||||||| |||||||||||||||||||||||  |||||| |||||| |||||| | |||||||||||    
T  8544860 tgtcagcttcctggatcattctctcaatttcttcccttgataatcttccattttcaatagttattgtaat 8544929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 39 - 409
Target Start/End: Original strand, 8569237 - 8569607
Alignment:
Q  39 taagaatcagaatcactttactcatcagagtaacctttattgatcttcttcaaagatgattcaaatatgctctcaagctccctctgaaattccacaaaca 138  Q
    |||||||| |||||||||| ||||||||||| |||||| |||||||| |||| ||  |||||||| ||||||||||||||| || |||| ||||||||||    
T  8569237 taagaatccgaatcacttttctcatcagagtcacctttgttgatcttgttcatagcagattcaaagatgctctcaagctccttcagaaagtccacaaaca 8569336  T
Q  139 taaatgcttcttgatgctgtttttcatcaatcaatttctttccctttatcattgcagagttgatcttcattctttctattgaagtaagcatggaactaac 238  Q
     ||| |  ||||  |||||  | ||| |||||||  | ||||||||  ||||||| ||||||||||||  | | ||||  | ||| ||| | || |||      
T  8569337 caaaggtatcttcttgctggctatcaccaatcaaactttttcccttggtcattgctgagttgatcttctctttgtctacaggagtgagctttgagctagt 8569436  T
Q  239 accatcatccttcattacttttctcatattgtaaagataatcatccagatcattcattgctttaactttattcttgaacttcaagtcttcatctttgaaa 338  Q
    || ||| | ||||||||||||||| |  ||||||||||||||||||| | ||||  |||||| |||||| || |||||||||| ||||| | | ||||||    
T  8569437 actatcgttcttcattacttttcttactttgtaaagataatcatccaaagcatttcttgcttcaactttctttttgaacttcatgtcttgagccttgaaa 8569536  T
Q  339 ttctcagcttcttggatcattctctcaatttcttcggttgatagtcttcccttttcattcgttattgtaat 409  Q
    ||||||||||| ||||||||||||||||||| | |  |||||| ||||||||| ||||| |||||||||||    
T  8569537 ttctcagcttcctggatcattctctcaatttgtccccttgataatcttcccttctcattagttattgtaat 8569607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 72 - 410
Target Start/End: Original strand, 8580656 - 8580994
Alignment:
Q  72 cctttattgatcttcttcaaagatgattcaaatatgctctcaagctccctctgaaattccacaaacataaatgcttcttgatgctgtttttcatcaatca 171  Q
    ||||| |||||||| ||||  || |||||||| ||||||||||||||| || |||| |||||||||| |||||| ||||  || || || | ||||||||    
T  8580656 cctttcttgatcttgttcatggaagattcaaagatgctctcaagctccttcagaaagtccacaaacacaaatgcatcttcctgttggttgttatcaatca 8580755  T
Q  172 atttctttccctttatcattgcagagttgatcttcattctttctattgaagtaagcatggaactaacaccatcatccttcattacttttctcatattgta 271  Q
    |  | |||||||||||||||||||| || |||||   | | ||||  |  || ||| | |||||||||| || ||||| ||||||||| ||||  |||||    
T  8580756 aactttttccctttatcattgcagaattaatcttttctttgtctacagtggtgagctttgaactaacacaattatcctccattactttcctcactttgta 8580855  T
Q  272 aagataatcatccagatcattcattgctttaactttattcttgaacttcaagtcttcatctttgaaattctcagcttcttggatcattctctcaatttct 371  Q
    ||||||||| |||| | |||| |||||||||||||| |||||||||| || ||||| | | || ||| | ||||||| |   |||||| ||||||||||     
T  8580856 aagataatcgtccaaagcatttattgctttaactttcttcttgaactccatgtcttgagccttaaaaatttcagcttgtaaaatcattttctcaatttcc 8580955  T
Q  372 tcggttgatagtcttcccttttcattcgttattgtaata 410  Q
    ||  |||| |||||||| |||||||||||||||||||||    
T  8580956 tctcttgaaagtcttccattttcattcgttattgtaata 8580994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 165 - 411
Target Start/End: Original strand, 8589690 - 8589936
Alignment:
Q  165 tcaatcaatttctttccctttatcattgcagagttgatcttcattctttctattgaagtaagcatggaactaacaccatcatccttcattacttttctca 264  Q
    ||||| ||||| || ||||||||||||||||| |||||  ||| | | || |  ||||||||| |||||   ||||  ||||||||||||||||| ||||    
T  8589690 tcaattaattttttcccctttatcattgcagaattgattctcactttgtcaacagaagtaagcttggaagctacactgtcatccttcattactttcctca 8589789  T
Q  265 tattgtaaagataatcatccagatcattcattgctttaactttattcttgaacttcaagtcttcatctttgaaattctcagcttcttggatcattctctc 364  Q
    | | ||||||||||||||| | | ||||||||||| ||||||| |||     ||||| ||||||| | ||||| | ||||||||| ||||||||||||||    
T  8589790 tgtcgtaaagataatcatctaaagcattcattgctctaactttcttcacatgcttcatgtcttcagccttgaagtgctcagcttcctggatcattctctc 8589889  T
Q  365 aatttcttcggttgatagtcttcccttttcattcgttattgtaatat 411  Q
    |||||||||| |||  |||||||| |||||||| |||||||||||||    
T  8589890 aatttcttcgcttgtcagtcttccattttcattggttattgtaatat 8589936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 245 - 409
Target Start/End: Complemental strand, 29582880 - 29582716
Alignment:
Q  245 atccttcattacttttctcatattgtaaagataatcatccagatcattcattgctttaactttattcttgaacttcaagtcttcatctttgaaattctca 344  Q
    ||||| ||||||||| ||||| ||||||||||| || |||| | ||||||||||| || || |  | | ||||||||  |||||| | |||||||||||     
T  29582880 atcctccattactttactcattttgtaaagatagtcgtccaaagcattcattgctctagctctcatttggaacttcagatcttcaaccttgaaattctct 29582781  T
Q  345 gcttcttggatcattctctcaatttcttcggttgatagtcttcccttttcattcgttattgtaat 409  Q
    ||||||||||||||||||||||||||||| ||||| | |||||| ||| |||| |||||||||||    
T  29582780 gcttcttggatcattctctcaatttcttcagttgacaatcttccatttacatttgttattgtaat 29582716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 245 - 413
Target Start/End: Original strand, 8537168 - 8537336
Alignment:
Q  245 atccttcattacttttctcatattgtaaagataatcatccagatcattcattgctttaactttattcttgaacttcaagtcttcatctttgaaattctca 344  Q
    ||||||||| |||||  ||| |||||| ||||| ||||||| | |||| ||||| | |  ||| ||||||||||| | ||||||  ||||||||||||||    
T  8537168 atccttcataactttcttcacattgtagagatagtcatccaaagcatttattgcctcagatttcttcttgaactttatgtcttctgctttgaaattctca 8537267  T
Q  345 gcttcttggatcattctctcaatttcttcggttgatagtcttcccttttcattcgttattgtaatatct 413  Q
    |||||||| || ||||||| |||||| || ||||||| ||||||  ||||||| ||||| |||||||||    
T  8537268 gcttcttgaattattctcttaatttcatcagttgataatcttccaatttcattagttatggtaatatct 8537336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 231 - 385
Target Start/End: Original strand, 8575417 - 8575571
Alignment:
Q  231 gaactaacaccatcatccttcattacttttctcatattgtaaagataatcatccagatcattcattgctttaactttattcttgaacttcaagtcttcat 330  Q
    |||| |||||||||||||||||||| ||| |||  ||||| ||||||||| ||||   |||| |||||| ||||||| |||||||||| || ||||| |     
T  8575417 gaaccaacaccatcatccttcattaatttcctcgcattgtgaagataatcgtccaatgcatttattgctgtaactttcttcttgaactccatgtcttgag 8575516  T
Q  331 ctttgaaattctcagcttcttggatcattctctcaatttcttcggttgatagtct 385  Q
    | |||||| | ||||||||||| ||||||||| |||||||||  || ||||||||    
T  8575517 ccttgaaaatttcagcttcttgaatcattctcgcaatttcttgagtcgatagtct 8575571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 88 - 409
Target Start/End: Complemental strand, 7878926 - 7878605
Alignment:
Q  88 tcaaagatgattcaaatatgctctcaagctccctctgaaattccacaaacataaatgcttcttgatgctgtttttcatcaatcaatttctttccctttat 187  Q
    |||||| ||||||| || ||||||||||||||||| |||| || ||||||| ||  |  || |  | ||| || |||||||| || || | |||||||||    
T  7878926 tcaaagctgattcacatgtgctctcaagctccctcagaaagtcgacaaacacaagcgtctcatatttctgcttgtcatcaatgaaattttctccctttat 7878827  T
Q  188 cattgcagagttgatcttcattctttctattgaagtaagcatggaactaacaccatcatccttcattacttttctcatattgtaaagataatcatccaga 287  Q
     |||||||| ||||| | || | | || |  | ||| ||| | ||| |||| | |||||||||||||||||| |||||  | ||||  ||||| |||| |    
T  7878826 aattgcagaattgatttccaatttctcaacaggagtgagctttgaagtaacgctatcatccttcattactttcctcattctataaatgtaatcctccaaa 7878727  T
Q  288 tcattcattgctttaactttattcttgaacttcaagtcttcatctttgaaattctcagcttcttggatcattctctcaatttcttcggttgatagtcttc 387  Q
     |||||| |||| |||| || | | | ||||||| |||||||   ||||| | |||||||||||  ||| ||||||||||||||||  ||||||||||||    
T  7878726 gcattcactgctctaaccttctccataaacttcatgtcttcagacttgaagtactcagcttctttaatctttctctcaatttcttcccttgatagtcttc 7878627  T
Q  388 ccttttcattcgttattgtaat 409  Q
    | ||||||||||| ||||||||    
T  7878626 cattttcattcgtaattgtaat 7878605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 225 - 406
Target Start/End: Complemental strand, 29578731 - 29578550
Alignment:
Q  225 agcatggaactaacaccatcatccttcattacttttctcatattgtaaagataatcatccagatcattcattgctttaactttattcttgaa-cttcaag 323  Q
    ||||||||||||||||  | ||||| ||||||||| ||| | |||||||||||||| |||| | |||| |  ||| || |||| | |||||| |||||      
T  29578731 agcatggaactaacactgttatcctccattactttactcgttttgtaaagataatcttccaaagcatttaccgctctagctttct-cttgaaacttcata 29578633  T
Q  324 tcttcatctttgaaattctcagcttcttggatcattctctcaatttcttcggttgatagtcttcccttttcattcgttattgt 406  Q
    |||||| | ||||| |||||||||||||||||||||| |||||||||||  ||||| |||||||  || ||||| ||||||||    
T  29578632 tcttcaaccttgaatttctcagcttcttggatcattcgctcaatttcttgagttgaaagtcttctattatcatttgttattgt 29578550  T

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Target: chr7; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 15 - 119
Target Start/End: Original strand, 8575202 - 8575305
Alignment:
Q  15 atgaaataactaaaaagtgatcaataagaatcagaatcactttactcatcagagtaacctttattgatcttcttcaaagatgattcaaatatgctctcaa 114  Q
    |||||||||||||||||| |||||  |||| |  ||||||||| |||||||||||| ||||| || ||||| |||  ||| |||||||| ||||||||||    
T  8575202 atgaaataactaaaaagtcatcaactagaaccc-aatcactttcctcatcagagtagcctttgttaatcttgttcttagaagattcaaagatgctctcaa 8575300  T
Q  115 gctcc 119  Q
    |||||    
T  8575301 gctcc 8575305  T

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Target: chr7; HSP #14
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 43 - 89
Target Start/End: Original strand, 8600926 - 8600972
Alignment:
Q  43 aatcagaatcactttactcatcagagtaacctttattgatcttcttc 89  Q
    |||||||||||||||||||||||||| ||||||||||| ||||||||    
T  8600926 aatcagaatcactttactcatcagagaaacctttattggtcttcttc 8600972  T

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Target: chr8 (Bit Score: 124; Significance: 1e-63; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 34 - 413
Target Start/End: Original strand, 12527425 - 12527804
Alignment:
Q  34 atcaataagaatcagaatcactttactcatcagagtaacctttattgatcttcttcaaagatgattcaaatatgctctcaagctccctctgaaattccac 133  Q
    |||| |||||||||||||||||||  ||| | ||||||||||| |||||||| |||||||  ||| |||| ||||||||||||||| ||  ||| ||||     
T  12527425 atcattaagaatcagaatcactttcttcaccggagtaacctttgttgatcttattcaaagcagatccaaagatgctctcaagctccttcaaaaagtccaa 12527524  T
Q  134 aaacataaatgcttcttgatgctgtttttcatcaatcaatttctttccctttatcattgcagagttgatcttcattctttctattgaagtaagcatggaa 233  Q
    ||||| |||||  ||||  ||||  ||| ||||||||||  | |||||||||||||||||||| |  |||   ||| | ||||  |  || |||||||||    
T  12527525 aaacacaaatgtatcttcctgcttgtttccatcaatcaagctttttccctttatcattgcagaatctatcaaaattttgtctacaggtgtcagcatggaa 12527624  T
Q  234 ctaacaccatcatccttcattacttttctcatattgtaaagataatcatccagatcattcattgctttaactttattcttgaacttcaagtcttcatctt 333  Q
    ||||||| || ||||||||| | ||| |||| || ||||||||| ||||||| | |||| |||||||||||||| || ||||||||||  |||||| | |    
T  12527625 ctaacacaattatccttcatgattttcctcacatggtaaagatagtcatccaaagcattgattgctttaactttctttttgaacttcatatcttcagcct 12527724  T
Q  334 tgaaattctcagcttcttggatcattctctcaatttcttcggttgatagtcttcccttttcattcgttattgtaatatct 413  Q
    |||||||||||||||| |||||||||||| ||||||||||  |||||| |||||| |||||||| |||||||||||||||    
T  12527725 tgaaattctcagcttcctggatcattctcccaatttcttcacttgataatcttccattttcatttgttattgtaatatct 12527804  T

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Target: chr6 (Bit Score: 33; Significance: 0.000000002; HSPs: 4)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 323 - 391
Target Start/End: Original strand, 11195927 - 11195995
Alignment:
Q  323 gtcttcatctttgaaattctcagcttcttggatcattctctcaatttcttcggttgatagtcttccctt 391  Q
    ||||||||||||| | ||||||||||||| |||||| ||||||||||| ||  |||| | |||||||||    
T  11195927 gtcttcatctttgtacttctcagcttctttgatcatcctctcaatttcctcctttgacaatcttccctt 11195995  T

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Target: chr6; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 323 - 391
Target Start/End: Original strand, 11275143 - 11275211
Alignment:
Q  323 gtcttcatctttgaaattctcagcttcttggatcattctctcaatttcttcggttgatagtcttccctt 391  Q
    ||||||||||||| | ||||||||||| | |||||| ||||||||||| ||  |||| |||||||||||    
T  11275143 gtcttcatctttgtacttctcagcttcattgatcatcctctcaatttcctcttttgacagtcttccctt 11275211  T

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Target: chr6; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 323 - 406
Target Start/End: Original strand, 11132198 - 11132281
Alignment:
Q  323 gtcttcatctttgaaattctcagcttcttggatcattctctcaatttcttcggttgatagtcttcccttttcattcgttattgt 406  Q
    ||||||||| ||| | ||||||||||||| |||||| |||||||| |||||  |||| || |||||||| |||||  |||||||    
T  11132198 gtcttcatccttgtacttctcagcttcttcgatcatcctctcaatctcttcttttgacagccttcccttgtcatttcttattgt 11132281  T

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Target: chr6; HSP #4
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 323 - 397
Target Start/End: Original strand, 11208581 - 11208655
Alignment:
Q  323 gtcttcatctttgaaattctcagcttcttggatcattctctcaatttcttcggttgatagtcttcccttttcatt 397  Q
    ||||||||||||| | |||||||||||   |||||| ||||||||||| ||  |||| ||||||||||| |||||    
T  11208581 gtcttcatctttgtatttctcagcttcactgatcatcctctcaatttcctcctttgacagtcttcccttgtcatt 11208655  T

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