View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11932_low_65 (Length: 274)
Name: NF11932_low_65
Description: NF11932
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11932_low_65 |
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Alignment Details
Target: chr2 (Bit Score: 237; Significance: 1e-131; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 19 - 259
Target Start/End: Original strand, 8284304 - 8284544
Alignment:
| Q |
19 |
accttaaagaagaaaagggaaaaaagaataaagaatatagggcaatatgttcttaactcttggaagattgaatcttgcttgtatagagagacaaagtaaa |
118 |
Q |
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| T |
8284304 |
accttaaagaagaaaagggaaaaaagaataaagaatatagggcaatatgttcttaactcttggaagattgaatcttgcttgtatagagagacaaagtaaa |
8284403 |
T |
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| Q |
119 |
gttatgtggagcctcattcaaacgaatactactaagtttgcagtcaaaataaaaagggtgtataccgttgtctcgtctttatttattcacaaagtgtgat |
218 |
Q |
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| T |
8284404 |
gttatgtggagcctcattcaaacgaatactactaagtttgcagtcaaaataaaaagggtgtataccgttgtctcgtctttatttattcacaaagtgtgat |
8284503 |
T |
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| Q |
219 |
agaattaaacatcaagcatttcttgttaatgtgcatctgtg |
259 |
Q |
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| T |
8284504 |
agaattaaacatcaagcatttcttgttaatgtgcatttgtg |
8284544 |
T |
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