View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11932_low_76 (Length: 244)

Name: NF11932_low_76
Description: NF11932
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11932_low_76
NF11932_low_76
[»] chr2 (37 HSPs)
chr2 (1-226)||(25313569-25313797)
chr2 (164-226)||(2029736-2029797)
chr2 (164-226)||(4662198-4662259)
chr2 (164-226)||(17719367-17719428)
chr2 (164-226)||(37812554-37812615)
chr2 (164-226)||(37840304-37840365)
chr2 (164-226)||(94076-94137)
chr2 (164-226)||(3738900-3738961)
chr2 (164-226)||(5711495-5711556)
chr2 (164-226)||(5711731-5711792)
chr2 (168-226)||(14927073-14927130)
chr2 (164-226)||(16419469-16419530)
chr2 (164-226)||(33606110-33606171)
chr2 (164-226)||(37812324-37812385)
chr2 (164-226)||(40379265-40379326)
chr2 (164-226)||(40379500-40379561)
chr2 (164-223)||(93182-93239)
chr2 (163-226)||(32356352-32356414)
chr2 (163-226)||(32884073-32884135)
chr2 (164-226)||(2029971-2030032)
chr2 (164-226)||(2324441-2324502)
chr2 (164-226)||(12343806-12343867)
chr2 (164-226)||(14466466-14466527)
chr2 (164-226)||(15124604-15124665)
chr2 (164-226)||(16533514-16533575)
chr2 (164-226)||(27036468-27036529)
chr2 (164-226)||(40149059-40149120)
chr2 (164-225)||(36351983-36352043)
chr2 (163-226)||(17525394-17525456)
chr2 (164-226)||(2324207-2324268)
chr2 (164-226)||(17854748-17854809)
chr2 (164-226)||(17854985-17855046)
chr2 (164-226)||(36316107-36316168)
chr2 (164-209)||(24396067-24396112)
chr2 (164-225)||(31700805-31700865)
chr2 (164-220)||(27897667-27897722)
chr2 (164-220)||(40149289-40149343)
[»] chr8 (34 HSPs)
chr8 (164-226)||(24532477-24532538)
chr8 (167-226)||(12688277-12688335)
chr8 (164-226)||(5932005-5932066)
chr8 (164-226)||(39052985-39053046)
chr8 (164-226)||(11232250-11232311)
chr8 (164-226)||(15042726-15042787)
chr8 (164-226)||(39052593-39052654)
chr8 (164-226)||(5590424-5590485)
chr8 (164-226)||(10449967-10450028)
chr8 (164-226)||(11232485-11232546)
chr8 (164-226)||(12317013-12317074)
chr8 (164-226)||(17469785-17469846)
chr8 (164-226)||(17477032-17477093)
chr8 (164-226)||(19256642-19256703)
chr8 (164-226)||(19256876-19256937)
chr8 (164-226)||(20094616-20094677)
chr8 (164-226)||(25325613-25325674)
chr8 (164-226)||(28069413-28069474)
chr8 (164-226)||(35682837-35682898)
chr8 (164-221)||(39960158-39960214)
chr8 (164-226)||(422273-422334)
chr8 (168-226)||(7729912-7729969)
chr8 (164-226)||(18004152-18004213)
chr8 (164-226)||(20301228-20301289)
chr8 (164-226)||(21087860-21087921)
chr8 (164-226)||(24075362-24075423)
chr8 (164-226)||(34842645-34842706)
chr8 (168-226)||(38447483-38447540)
chr8 (164-226)||(39743496-39743557)
chr8 (164-226)||(41790626-41790687)
chr8 (164-221)||(3157621-3157677)
chr8 (164-209)||(31197814-31197859)
chr8 (164-221)||(35385873-35385929)
chr8 (164-205)||(39052770-39052811)
[»] chr7 (38 HSPs)
chr7 (164-226)||(6001491-6001552)
chr7 (164-226)||(43688215-43688276)
chr7 (164-221)||(18826549-18826605)
chr7 (165-226)||(44874402-44874462)
chr7 (163-226)||(48661611-48661673)
chr7 (164-226)||(2404230-2404291)
chr7 (164-226)||(3519781-3519842)
chr7 (164-226)||(29469572-29469633)
chr7 (164-226)||(29469807-29469868)
chr7 (163-226)||(1596560-1596622)
chr7 (164-226)||(1596795-1596856)
chr7 (164-226)||(21055009-21055070)
chr7 (164-226)||(21861261-21861322)
chr7 (164-226)||(21861496-21861557)
chr7 (164-226)||(26239972-26240033)
chr7 (164-226)||(47710410-47710471)
chr7 (164-226)||(47722066-47722127)
chr7 (164-209)||(14540813-14540858)
chr7 (164-209)||(28080632-28080677)
chr7 (164-221)||(46452599-46452655)
chr7 (164-220)||(3392949-3393004)
chr7 (164-227)||(2544270-2544332)
chr7 (163-226)||(2544503-2544565)
chr7 (164-227)||(26562128-26562190)
chr7 (164-226)||(2404464-2404525)
chr7 (164-226)||(4267821-4267882)
chr7 (164-226)||(4268021-4268082)
chr7 (164-226)||(6634822-6634883)
chr7 (164-226)||(25620338-25620399)
chr7 (164-226)||(31485480-31485541)
chr7 (164-226)||(34027360-34027421)
chr7 (164-226)||(34027594-34027655)
chr7 (164-226)||(35308202-35308263)
chr7 (164-226)||(36277282-36277343)
chr7 (164-226)||(48243493-48243554)
chr7 (164-225)||(17202146-17202206)
chr7 (166-227)||(33996366-33996426)
chr7 (162-226)||(3038140-3038203)
[»] chr1 (40 HSPs)
chr1 (164-226)||(35772231-35772292)
chr1 (164-227)||(16163134-16163196)
chr1 (169-226)||(40079124-40079180)
chr1 (167-226)||(2859448-2859506)
chr1 (164-226)||(15986389-15986450)
chr1 (164-226)||(20208582-20208643)
chr1 (164-226)||(25713360-25713421)
chr1 (164-226)||(26177110-26177171)
chr1 (164-226)||(51459886-51459947)
chr1 (164-226)||(52650827-52650888)
chr1 (164-227)||(17452883-17452945)
chr1 (164-226)||(3169967-3170029)
chr1 (164-226)||(4113062-4113123)
chr1 (164-226)||(25145776-25145837)
chr1 (168-226)||(39348175-39348232)
chr1 (164-226)||(52961549-52961610)
chr1 (164-221)||(4112832-4112888)
chr1 (164-209)||(17412534-17412579)
chr1 (168-221)||(22100053-22100105)
chr1 (164-225)||(26173513-26173573)
chr1 (164-209)||(33156405-33156450)
chr1 (164-209)||(38080572-38080617)
chr1 (164-227)||(3169733-3169795)
chr1 (164-226)||(4098458-4098519)
chr1 (164-226)||(4112596-4112657)
chr1 (164-226)||(8870745-8870806)
chr1 (168-226)||(17468315-17468372)
chr1 (164-226)||(25145541-25145602)
chr1 (164-226)||(26176875-26176936)
chr1 (164-226)||(26865414-26865475)
chr1 (164-218)||(35303504-35303557)
chr1 (164-226)||(38668327-38668388)
chr1 (164-226)||(51459761-51459822)
chr1 (164-226)||(51460263-51460324)
chr1 (164-225)||(7307688-7307748)
chr1 (164-209)||(33156936-33156981)
chr1 (164-205)||(35772002-35772043)
chr1 (164-225)||(35892258-35892318)
chr1 (163-220)||(42586500-42586556)
chr1 (164-209)||(51460154-51460199)
[»] chr5 (36 HSPs)
chr5 (159-226)||(41667049-41667115)
chr5 (164-226)||(30770105-30770166)
chr5 (166-225)||(9368799-9368857)
chr5 (164-226)||(95322-95383)
chr5 (164-226)||(2063789-2063850)
chr5 (164-226)||(4481619-4481680)
chr5 (164-226)||(6637804-6637865)
chr5 (164-226)||(17352491-17352551)
chr5 (164-226)||(24346557-24346618)
chr5 (164-226)||(41666813-41666874)
chr5 (164-221)||(8081175-8081231)
chr5 (164-220)||(24269932-24269987)
chr5 (166-225)||(13701125-13701183)
chr5 (164-226)||(6919250-6919311)
chr5 (164-226)||(18333521-18333582)
chr5 (164-226)||(19705870-19705931)
chr5 (164-226)||(20510698-20510759)
chr5 (164-226)||(33337294-33337355)
chr5 (170-227)||(2061993-2062049)
chr5 (164-205)||(33337527-33337568)
chr5 (170-226)||(15480295-15480350)
chr5 (163-227)||(17352723-17352786)
chr5 (171-226)||(6413482-6413536)
chr5 (163-226)||(24531566-24531627)
chr5 (164-203)||(26245950-26245989)
chr5 (171-226)||(30758355-30758409)
chr5 (163-206)||(38976873-38976916)
chr5 (168-226)||(1564623-1564680)
chr5 (164-226)||(3859364-3859425)
chr5 (164-226)||(9368562-9368623)
chr5 (164-209)||(13700661-13700707)
chr5 (164-226)||(17150289-17150350)
chr5 (164-226)||(24647663-24647724)
chr5 (164-225)||(21209978-21210038)
chr5 (164-220)||(8098285-8098340)
chr5 (166-226)||(31181067-31181126)
[»] chr3 (33 HSPs)
chr3 (163-226)||(35038484-35038546)
chr3 (164-226)||(7697454-7697514)
chr3 (164-226)||(16927005-16927066)
chr3 (164-226)||(35038250-35038311)
chr3 (164-226)||(39683323-39683385)
chr3 (164-226)||(54368483-54368544)
chr3 (163-224)||(34992516-34992576)
chr3 (164-221)||(39620293-39620349)
chr3 (164-224)||(16239558-16239617)
chr3 (164-226)||(20327670-20327731)
chr3 (164-226)||(20327905-20327966)
chr3 (164-226)||(22729067-22729128)
chr3 (168-226)||(30179764-30179821)
chr3 (164-220)||(31317433-31317488)
chr3 (166-226)||(54368691-54368750)
chr3 (171-222)||(18757816-18757866)
chr3 (164-226)||(1723132-1723192)
chr3 (164-226)||(4155526-4155587)
chr3 (164-226)||(11589752-11589813)
chr3 (163-205)||(20303012-20303054)
chr3 (164-226)||(20303120-20303181)
chr3 (164-226)||(23691248-23691309)
chr3 (164-226)||(23708048-23708109)
chr3 (164-226)||(23726504-23726565)
chr3 (164-226)||(23744960-23745021)
chr3 (164-226)||(24063485-24063546)
chr3 (164-226)||(38791506-38791567)
chr3 (164-226)||(39269298-39269359)
chr3 (164-226)||(54567859-54567920)
chr3 (163-208)||(12930201-12930246)
chr3 (164-209)||(27086554-27086599)
chr3 (164-220)||(3975420-3975475)
chr3 (164-220)||(17638375-17638430)
[»] chr6 (36 HSPs)
chr6 (164-226)||(17147716-17147777)
chr6 (162-225)||(2736459-2736521)
chr6 (162-225)||(2737227-2737289)
chr6 (164-226)||(2736223-2736284)
chr6 (164-226)||(4868633-4868694)
chr6 (164-226)||(13353168-13353229)
chr6 (164-226)||(33796293-33796354)
chr6 (160-220)||(12330352-12330411)
chr6 (164-227)||(24554084-24554146)
chr6 (164-226)||(2753225-2753286)
chr6 (164-226)||(3680213-3680274)
chr6 (164-226)||(4868869-4868930)
chr6 (164-226)||(6542999-6543060)
chr6 (164-226)||(7638646-7638707)
chr6 (164-226)||(9704987-9705048)
chr6 (164-226)||(9705221-9705282)
chr6 (164-226)||(27772913-27772974)
chr6 (166-220)||(30256782-30256835)
chr6 (164-226)||(31961145-31961206)
chr6 (164-226)||(33494506-33494567)
chr6 (164-226)||(6369431-6369492)
chr6 (164-226)||(12330000-12330061)
chr6 (171-225)||(15102988-15103041)
chr6 (164-226)||(21690689-21690750)
chr6 (164-226)||(27653184-27653245)
chr6 (164-226)||(27656425-27656486)
chr6 (164-226)||(27772681-27772742)
chr6 (164-226)||(28868013-28868074)
chr6 (164-226)||(30505704-30505766)
chr6 (164-221)||(7915817-7915873)
chr6 (164-209)||(13353403-13353448)
chr6 (164-225)||(19712919-19712979)
chr6 (164-205)||(30505470-30505511)
chr6 (164-209)||(33796528-33796573)
chr6 (166-226)||(25065150-25065209)
chr6 (164-220)||(33494741-33494796)
[»] chr4 (42 HSPs)
chr4 (164-226)||(27634137-27634198)
chr4 (164-226)||(31254463-31254524)
chr4 (164-226)||(35788861-35788922)
chr4 (164-226)||(39902619-39902680)
chr4 (163-226)||(35788625-35788687)
chr4 (164-226)||(6218406-6218467)
chr4 (164-226)||(9279194-9279255)
chr4 (168-226)||(22827509-22827566)
chr4 (164-226)||(22863441-22863502)
chr4 (164-226)||(27634572-27634633)
chr4 (164-226)||(28245582-28245643)
chr4 (164-226)||(50543623-50543684)
chr4 (164-227)||(2516168-2516230)
chr4 (163-226)||(11036802-11036864)
chr4 (163-226)||(21498320-21498382)
chr4 (163-226)||(35645821-35645883)
chr4 (164-226)||(980106-980167)
chr4 (164-226)||(1518131-1518192)
chr4 (164-226)||(21498762-21498823)
chr4 (164-226)||(22231129-22231190)
chr4 (164-226)||(35797033-35797094)
chr4 (164-226)||(40717262-40717323)
chr4 (168-226)||(44118915-44118972)
chr4 (160-226)||(52559530-52559595)
chr4 (164-226)||(53828345-53828406)
chr4 (164-225)||(20821940-20822000)
chr4 (164-220)||(17111735-17111790)
chr4 (164-219)||(21684965-21685019)
chr4 (163-226)||(54055088-54055150)
chr4 (164-226)||(5846346-5846407)
chr4 (164-226)||(11036567-11036628)
chr4 (164-226)||(22845503-22845564)
chr4 (164-226)||(35796798-35796859)
chr4 (164-226)||(35819184-35819245)
chr4 (164-226)||(45784934-45784995)
chr4 (164-226)||(50543386-50543447)
chr4 (164-226)||(53814985-53815046)
chr4 (164-226)||(53828579-53828640)
chr4 (163-225)||(54054862-54054923)
chr4 (164-225)||(52559771-52559831)
chr4 (166-226)||(35175004-35175063)
chr4 (166-226)||(37836049-37836108)
[»] scaffold0519 (2 HSPs)
scaffold0519 (164-226)||(2118-2179)
scaffold0519 (164-226)||(1883-1944)
[»] scaffold0001 (1 HSPs)
scaffold0001 (165-223)||(429841-429898)
[»] scaffold0060 (1 HSPs)
scaffold0060 (163-226)||(20541-20603)
[»] scaffold0092 (1 HSPs)
scaffold0092 (164-226)||(5622-5683)
[»] scaffold0050 (1 HSPs)
scaffold0050 (165-226)||(69589-69649)
[»] scaffold0481 (1 HSPs)
scaffold0481 (164-227)||(3526-3588)
[»] scaffold0400 (1 HSPs)
scaffold0400 (166-221)||(3813-3867)
[»] scaffold0365 (1 HSPs)
scaffold0365 (166-221)||(4457-4511)
[»] scaffold0129 (1 HSPs)
scaffold0129 (165-220)||(14506-14560)
[»] scaffold0048 (1 HSPs)
scaffold0048 (162-225)||(81807-81869)
[»] scaffold0766 (1 HSPs)
scaffold0766 (164-226)||(6241-6302)
[»] scaffold0027 (1 HSPs)
scaffold0027 (164-222)||(121520-121577)
[»] scaffold0692 (1 HSPs)
scaffold0692 (165-226)||(5810-5870)


Alignment Details
Target: chr2 (Bit Score: 195; Significance: 1e-106; HSPs: 37)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 25313797 - 25313569
Alignment:
Q  1 caagaaatatatgtcatcttgctcttcaacctccgctgcacctgagattgaaattcacaagttaattctatgcccatatcaaaacaaa---taaggaaaa 97  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||   |||||||||    
T  25313797 caagaaatatatgtcatcttgctcttcaacctccgctgcacctgagattgaaattcacaagttaattctatgccgatatcaaaacaaaccataaggaaaa 25313698  T
Q  98 tatatctgtatgggtaaaaaatcagaagcctgtatagatattcacaatatgatgttaggaagtaaatgttaagagtcccacatcggatagtagatgacct 197  Q
    |||||||||||||  ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  25313697 tatatctgtatggcaaaaaaatcagaagcccgtatagatattcacaatatgatgttaggaagtaaatgttaagagtcccacattggatagtagatgacct 25313598  T
Q  198 gacaatgtgttttataagtgggggcaatc 226  Q
    |||||||||||||||||||||||||||||    
T  25313597 gacaatgtgttttataagtgggggcaatc 25313569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 164 - 226
Target Start/End: Original strand, 2029736 - 2029797
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    |||||||||||||||||||||||| | |||||||||||||||| ||||||||||| |||||||    
T  2029736 tgttaagagtcccacatcggataggacatgacctgacaatgtg-tttataagtggaggcaatc 2029797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 164 - 226
Target Start/End: Original strand, 4662198 - 4662259
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    |||||||||||||||||||||||| | ||||||||||||| || |||||||||||||||||||    
T  4662198 tgttaagagtcccacatcggataggacatgacctgacaatatg-tttataagtgggggcaatc 4662259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 164 - 226
Target Start/End: Original strand, 17719367 - 17719428
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    ||||||||||||||||||||||||  |||| |||||||||||| |||||||||||||||||||    
T  17719367 tgttaagagtcccacatcggataggtgatggcctgacaatgtg-tttataagtgggggcaatc 17719428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 164 - 226
Target Start/End: Complemental strand, 37812615 - 37812554
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    |||||||||||||||||||||||  | |||||||||||||||| |||||||||||||||||||    
T  37812615 tgttaagagtcccacatcggataagacatgacctgacaatgtg-tttataagtgggggcaatc 37812554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 164 - 226
Target Start/End: Original strand, 37840304 - 37840365
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    ||||||||||||||||| |||||| |||||||||||||||||| ||||||||||| |||||||    
T  37840304 tgttaagagtcccacattggataggagatgacctgacaatgtg-tttataagtggaggcaatc 37840365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 164 - 226
Target Start/End: Complemental strand, 94137 - 94076
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    ||||||||||||||||||||||||  |||| ||||||| |||| |||||||||||||||||||    
T  94137 tgttaagagtcccacatcggataggtgatggcctgacagtgtg-tttataagtgggggcaatc 94076  T

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Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 164 - 226
Target Start/End: Original strand, 3738900 - 3738961
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    |||||||||||| ||||||||||| ||||||| ||| |||||| |||||||||||||||||||    
T  3738900 tgttaagagtccaacatcggatagaagatgacatgataatgtg-tttataagtgggggcaatc 3738961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 164 - 226
Target Start/End: Complemental strand, 5711556 - 5711495
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    ||||||||||||||||||||| || | ||| |||||||||||| |||||||||||||||||||    
T  5711556 tgttaagagtcccacatcggaaaggaaatggcctgacaatgtg-tttataagtgggggcaatc 5711495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 164 - 226
Target Start/End: Complemental strand, 5711792 - 5711731
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    ||||||||||||||||||||| || | ||| |||||||||||| |||||||||||||||||||    
T  5711792 tgttaagagtcccacatcggacaggacatggcctgacaatgtg-tttataagtgggggcaatc 5711731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 168 - 226
Target Start/End: Original strand, 14927073 - 14927130
Alignment:
Q  168 aagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    ||||||| |||||||||||  |||||||||||||||||| |||||||||||||||||||    
T  14927073 aagagtcacacatcggataagagatgacctgacaatgtg-tttataagtgggggcaatc 14927130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 164 - 226
Target Start/End: Original strand, 16419469 - 16419530
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    |||||||||||||||||||||||| | |||  ||||||||||| |||||||||||||||||||    
T  16419469 tgttaagagtcccacatcggataggacatggtctgacaatgtg-tttataagtgggggcaatc 16419530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 164 - 226
Target Start/End: Complemental strand, 33606171 - 33606110
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    |||||||||||||||||||||||| ||||| ||||| |||||| ||||||||| |||||||||    
T  33606171 tgttaagagtcccacatcggataggagatggcctgaaaatgtg-tttataagtaggggcaatc 33606110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 164 - 226
Target Start/End: Complemental strand, 37812385 - 37812324
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    |||||||||||||||||||||||| | ||| |||||||||||| ||||||||||||| |||||    
T  37812385 tgttaagagtcccacatcggataggacatggcctgacaatgtg-tttataagtggggacaatc 37812324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 164 - 226
Target Start/End: Complemental strand, 40379326 - 40379265
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    ||||||||||||||||||||||||  |||| ||||||| |||| |||||||||||||||||||    
T  40379326 tgttaagagtcccacatcggataggtgatggcctgacagtgtg-tttataagtgggggcaatc 40379265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 164 - 226
Target Start/End: Complemental strand, 40379561 - 40379500
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    ||||||||||||||||||||||||  |||| ||||||| |||| |||||||||||||||||||    
T  40379561 tgttaagagtcccacatcggataggtgatggcctgacagtgtg-tttataagtgggggcaatc 40379500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 164 - 223
Target Start/End: Complemental strand, 93239 - 93182
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggca 223  Q
    ||||||||||||||||||||||||  |||| |||||||||||| ||||||||||||||||    
T  93239 tgttaagagtcccacatcggataggtgatg-cctgacaatgtg-tttataagtgggggca 93182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 163 - 226
Target Start/End: Original strand, 32356352 - 32356414
Alignment:
Q  163 atgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    |||||||||||| ||||||||| |  ||||||| |||||||||| |||||||||||||||||||    
T  32356352 atgttaagagtctcacatcggacatgagatgacatgacaatgtg-tttataagtgggggcaatc 32356414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 163 - 226
Target Start/End: Original strand, 32884073 - 32884135
Alignment:
Q  163 atgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    ||||||||||||||||||||| ||| || || ||||||||| || |||||||||||||||||||    
T  32884073 atgttaagagtcccacatcggttaggagttggcctgacaatttg-tttataagtgggggcaatc 32884135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 164 - 226
Target Start/End: Original strand, 2029971 - 2030032
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    ||||||||||||||||||||| |  | |||||||||||||||| ||||||||||| |||||||    
T  2029971 tgttaagagtcccacatcggacatgacatgacctgacaatgtg-tttataagtggaggcaatc 2030032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 164 - 226
Target Start/End: Original strand, 2324441 - 2324502
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    |||||||||||||||||||| ||| || || ||||||||| || |||||||||||||||||||    
T  2324441 tgttaagagtcccacatcggttagaagttggcctgacaatttg-tttataagtgggggcaatc 2324502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 164 - 226
Target Start/End: Complemental strand, 12343867 - 12343806
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    |||||||||||||||||||||||| |||||  | |||||||||  ||||||||||||||||||    
T  12343867 tgttaagagtcccacatcggataggagatggtcagacaatgtg-cttataagtgggggcaatc 12343806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 164 - 226
Target Start/End: Complemental strand, 14466527 - 14466466
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    ||||||||||||||||||||| || | ||| |||||||||||| |||||||||||| ||||||    
T  14466527 tgttaagagtcccacatcggacaggacatggcctgacaatgtg-tttataagtgggagcaatc 14466466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 164 - 226
Target Start/End: Complemental strand, 15124665 - 15124604
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    |||||||||||||||||||||||| | |||  |||||||| || |||||||||||||||||||    
T  15124665 tgttaagagtcccacatcggatagaacatggtctgacaatatg-tttataagtgggggcaatc 15124604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 164 - 226
Target Start/End: Original strand, 16533514 - 16533575
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    |||||||||||| ||| |||||||  |||| |||||||||||| |||||||||||||||||||    
T  16533514 tgttaagagtcctacaccggataggtgatggcctgacaatgtg-tttataagtgggggcaatc 16533575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 164 - 226
Target Start/End: Complemental strand, 27036529 - 27036468
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    |||||||||||||||||||| ||| || || ||||||||| || |||||||||||||||||||    
T  27036529 tgttaagagtcccacatcggttaggagttggcctgacaatttg-tttataagtgggggcaatc 27036468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 164 - 226
Target Start/End: Complemental strand, 40149120 - 40149059
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    ||||||||||| |||||||||||| ||||||||| ||| |||| ||||||||||||| |||||    
T  40149120 tgttaagagtctcacatcggatagaagatgacctaacagtgtg-tttataagtggggacaatc 40149059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 164 - 225
Target Start/End: Complemental strand, 36352043 - 36351983
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaat 225  Q
    |||||||||||  ||||||||||| ||| |||||||||||||| ||||||||||||| ||||    
T  36352043 tgttaagagtcttacatcggataggagacgacctgacaatgtg-tttataagtggggacaat 36351983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 163 - 226
Target Start/End: Complemental strand, 17525456 - 17525394
Alignment:
Q  163 atgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    |||||||||||||||||||||| |  | |||  ||||||||||| |||||||||||||||||||    
T  17525456 atgttaagagtcccacatcggacatgacatggtctgacaatgtg-tttataagtgggggcaatc 17525394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 226
Target Start/End: Original strand, 2324207 - 2324268
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    |||||||||||||||||||| ||| || ||  |||||||| || |||||||||||||||||||    
T  2324207 tgttaagagtcccacatcggttaggagttggtctgacaatttg-tttataagtgggggcaatc 2324268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 226
Target Start/End: Complemental strand, 17854809 - 17854748
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    |||||||||||||||||||| ||| || |  ||||||||| || |||||||||||||||||||    
T  17854809 tgttaagagtcccacatcggttaggagttagcctgacaatctg-tttataagtgggggcaatc 17854748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 226
Target Start/End: Complemental strand, 17855046 - 17854985
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    ||||||||||| |||||||| ||| || |||||||||||| || |||||||||| ||||||||    
T  17855046 tgttaagagtctcacatcggttaggagttgacctgacaatttg-tttataagtgagggcaatc 17854985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 226
Target Start/End: Complemental strand, 36316168 - 36316107
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    |||||||||||||||||| | ||| || || ||||||||| || |||||||||||||||||||    
T  36316168 tgttaagagtcccacatcagttagaagttggcctgacaatttg-tttataagtgggggcaatc 36316107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 164 - 209
Target Start/End: Original strand, 24396067 - 24396112
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttt 209  Q
    |||||||||||||||||||||||  ||||| ||||||||| |||||    
T  24396067 tgttaagagtcccacatcggatataagatggcctgacaatatgttt 24396112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 164 - 225
Target Start/End: Complemental strand, 31700865 - 31700805
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaat 225  Q
    ||||||||||  ||||||||||||  |||| |||||||||||| |||||||||| |||||||    
T  31700865 tgttaagagttacacatcggataggtgatggcctgacaatgtg-tttataagtgagggcaat 31700805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 220
Target Start/End: Complemental strand, 27897722 - 27897667
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggg 220  Q
    |||||||||||||||||||| ||| || || ||||||||| || |||||||||||||    
T  27897722 tgttaagagtcccacatcggttaggagttggcctgacaatttg-tttataagtgggg 27897667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 220
Target Start/End: Complemental strand, 40149343 - 40149289
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggg 220  Q
    |||||||||||| ||||||||||  ||||||||| |||||||| |||||||||||||    
T  40149343 tgttaagagtcc-acatcggatatgagatgacctaacaatgtg-tttataagtgggg 40149289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 47; Significance: 6e-18; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 164 - 226
Target Start/End: Complemental strand, 24532538 - 24532477
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    |||||||||||||||||||||||| ||||| |||||||||||| |||||||||||||||||||    
T  24532538 tgttaagagtcccacatcggataggagatggcctgacaatgtg-tttataagtgggggcaatc 24532477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 167 - 226
Target Start/End: Original strand, 12688277 - 12688335
Alignment:
Q  167 taagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    |||||||||||||| |||||| |||||||||||||||||| |||||||||||||||||||    
T  12688277 taagagtcccacattggatagaagatgacctgacaatgtg-tttataagtgggggcaatc 12688335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 164 - 226
Target Start/End: Complemental strand, 5932066 - 5932005
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    |||||||||||||||||| ||||||| ||| |||||||||||| |||||||||||||||||||    
T  5932066 tgttaagagtcccacatcagatagtacatggcctgacaatgtg-tttataagtgggggcaatc 5932005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 164 - 226
Target Start/End: Complemental strand, 39053046 - 39052985
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    ||||||||||||||||||||||||  |||| |||||||||||| |||||||||||||||||||    
T  39053046 tgttaagagtcccacatcggataggtgatggcctgacaatgtg-tttataagtgggggcaatc 39052985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 164 - 226
Target Start/End: Complemental strand, 11232311 - 11232250
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    ||||||||||||||||||||| || | ||| |||||||||||| |||||||||||||||||||    
T  11232311 tgttaagagtcccacatcggacaggacatggcctgacaatgtg-tttataagtgggggcaatc 11232250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 164 - 226
Target Start/End: Complemental strand, 15042787 - 15042726
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    |||||||||||||||||||||||  | ||| |||||||||||| |||||||||||||||||||    
T  15042787 tgttaagagtcccacatcggatacgacatggcctgacaatgtg-tttataagtgggggcaatc 15042726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 164 - 226
Target Start/End: Complemental strand, 39052654 - 39052593
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    |||||||||||||||||| |||||  |||| |||||||||||| |||||||||||||||||||    
T  39052654 tgttaagagtcccacatcagataggtgatggcctgacaatgtg-tttataagtgggggcaatc 39052593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 164 - 226
Target Start/End: Complemental strand, 5590485 - 5590424
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    |||| ||||||||||||||||||| |||||  ||||||||||| |||| ||||||||||||||    
T  5590485 tgttcagagtcccacatcggataggagatggtctgacaatgtg-tttacaagtgggggcaatc 5590424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 164 - 226
Target Start/End: Original strand, 10449967 - 10450028
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    ||||||||||| |||||||||||| | ||| |||||||||||| |||||||||| ||||||||    
T  10449967 tgttaagagtctcacatcggataggacatggcctgacaatgtg-tttataagtgtgggcaatc 10450028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 164 - 226
Target Start/End: Complemental strand, 11232546 - 11232485
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    ||||||||||||||||||||| || | |||  ||||||||||| |||||||||||||||||||    
T  11232546 tgttaagagtcccacatcggacaggacatggtctgacaatgtg-tttataagtgggggcaatc 11232485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 164 - 226
Target Start/End: Original strand, 12317013 - 12317074
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    ||||||||||||||||||||| || | |||  ||||||||||| |||||||||||||||||||    
T  12317013 tgttaagagtcccacatcggacaggacatggtctgacaatgtg-tttataagtgggggcaatc 12317074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 164 - 226
Target Start/End: Original strand, 17469785 - 17469846
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    |||||||||||||||||||| ||| || || ||||||||| || |||||||||||||||||||    
T  17469785 tgttaagagtcccacatcggttaggagttggcctgacaatttg-tttataagtgggggcaatc 17469846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 164 - 226
Target Start/End: Original strand, 17477032 - 17477093
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    |||||||||||||||||||| ||| || || ||||||||| || |||||||||||||||||||    
T  17477032 tgttaagagtcccacatcggttaggagttggcctgacaatttg-tttataagtgggggcaatc 17477093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 164 - 226
Target Start/End: Complemental strand, 19256703 - 19256642
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    |||||||||||||||||||| ||| || || ||||||||| || |||||||||||||||||||    
T  19256703 tgttaagagtcccacatcggttaggagttggcctgacaatttg-tttataagtgggggcaatc 19256642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 164 - 226
Target Start/End: Complemental strand, 19256937 - 19256876
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    |||||||||||||||||||| ||| || || ||||||||| || |||||||||||||||||||    
T  19256937 tgttaagagtcccacatcggttaggagttggcctgacaatttg-tttataagtgggggcaatc 19256876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 164 - 226
Target Start/End: Complemental strand, 20094677 - 20094616
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    ||||||||||||||||||| |||| ||||| |||||||||||| |||||| |||||| |||||    
T  20094677 tgttaagagtcccacatcgaatagaagatggcctgacaatgtg-tttatatgtggggacaatc 20094616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 164 - 226
Target Start/End: Original strand, 25325613 - 25325674
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    |||||||||||||||||||||||| | ||| ||| |||||||| |||||||||||| ||||||    
T  25325613 tgttaagagtcccacatcggataggacatggcctaacaatgtg-tttataagtgggtgcaatc 25325674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 164 - 226
Target Start/End: Complemental strand, 28069474 - 28069413
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    |||||||||||||||||||||||  | ||| |||||||||||  |||||||||||||||||||    
T  28069474 tgttaagagtcccacatcggatatgacatggcctgacaatgt-atttataagtgggggcaatc 28069413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 164 - 226
Target Start/End: Complemental strand, 35682898 - 35682837
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    |||||||||| |||||||||| || | ||| |||||||||||| |||||||||||||||||||    
T  35682898 tgttaagagttccacatcggacaggacatggcctgacaatgtg-tttataagtgggggcaatc 35682837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 164 - 221
Target Start/End: Original strand, 39960158 - 39960214
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtggggg 221  Q
    |||||||||||||||||||||||| ||||| ||||| ||| || ||||||||||||||    
T  39960158 tgttaagagtcccacatcggataggagatggcctgaaaatttg-tttataagtggggg 39960214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 226
Target Start/End: Complemental strand, 422334 - 422273
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    |||||| ||||||||||||||||| |||||  ||||||||||| |||| |||||| |||||||    
T  422334 tgttaaaagtcccacatcggataggagatggtctgacaatgtg-tttaaaagtggaggcaatc 422273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 226
Target Start/End: Original strand, 7729912 - 7729969
Alignment:
Q  168 aagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    |||||||||||||| ||||  ||||| |||||| ||||| |||||||||||||||||||    
T  7729912 aagagtcccacatcagatatgagatggcctgaccatgtg-tttataagtgggggcaatc 7729969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 226
Target Start/End: Complemental strand, 18004213 - 18004152
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    |||||||||||||||||| || || | ||| ||||||||| || |||||||||||||||||||    
T  18004213 tgttaagagtcccacatcagacaggacatggcctgacaatatg-tttataagtgggggcaatc 18004152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 226
Target Start/End: Original strand, 20301228 - 20301289
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    |||||||||| |||||| |||||  ||||| | |||||||||| |||||||||||||||||||    
T  20301228 tgttaagagtaccacattggatatgagatggcttgacaatgtg-tttataagtgggggcaatc 20301289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 226
Target Start/End: Original strand, 21087860 - 21087921
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    |||||||||| |||||| |||||  ||||| | |||||||||| |||||||||||||||||||    
T  21087860 tgttaagagtaccacattggatatgagatggcttgacaatgtg-tttataagtgggggcaatc 21087921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 226
Target Start/End: Complemental strand, 24075423 - 24075362
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    |||||||||||||||||||| ||| || || ||||||| | || |||||||||||||||||||    
T  24075423 tgttaagagtcccacatcggttaggagttggcctgacactttg-tttataagtgggggcaatc 24075362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 226
Target Start/End: Original strand, 34842645 - 34842706
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    |||||||||||||||||| | ||| || || ||||||||| || |||||||||||||||||||    
T  34842645 tgttaagagtcccacatcagttaggagttggcctgacaatttg-tttataagtgggggcaatc 34842706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 226
Target Start/End: Complemental strand, 38447540 - 38447483
Alignment:
Q  168 aagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    |||| ||||||| ||||||  ||||| |||||||||||| |||||||||||||||||||    
T  38447540 aagaatcccacaacggataagagatggcctgacaatgtg-tttataagtgggggcaatc 38447483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 226
Target Start/End: Original strand, 39743496 - 39743557
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    |||||||||||||||||||| ||| || || ||||||||| || ||||||||| |||||||||    
T  39743496 tgttaagagtcccacatcggttaggagttggcctgacaatttg-tttataagttggggcaatc 39743557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 226
Target Start/End: Original strand, 41790626 - 41790687
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    |||||| ||| |||||||| ||||  ||||||||||||||||| ||||||||||||| |||||    
T  41790626 tgttaaaagttccacatcgaataggtgatgacctgacaatgtg-tttataagtggggacaatc 41790687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 164 - 221
Target Start/End: Complemental strand, 3157677 - 3157621
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtggggg 221  Q
    ||||||||||||||||||||||||  |||| |||| ||||||  ||||||||||||||    
T  3157677 tgttaagagtcccacatcggataggtgatggcctggcaatgt-atttataagtggggg 3157621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 164 - 209
Target Start/End: Original strand, 31197814 - 31197859
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttt 209  Q
    |||||||||||||||||| |||||  |||| |||||||||||||||    
T  31197814 tgttaagagtcccacatcagataggtgatggcctgacaatgtgttt 31197859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 164 - 221
Target Start/End: Complemental strand, 35385929 - 35385873
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtggggg 221  Q
    |||||||||||||||||||||||| ||||  ||||| ||| || ||||||||||||||    
T  35385929 tgttaagagtcccacatcggatagaagatagcctgataatatg-tttataagtggggg 35385873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 164 - 205
Target Start/End: Complemental strand, 39052811 - 39052770
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgt 205  Q
    ||||||||||||||||||||||||  |||| |||||||||||    
T  39052811 tgttaagagtcccacatcggataggtgatggcctgacaatgt 39052770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 47; Significance: 6e-18; HSPs: 38)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 164 - 226
Target Start/End: Complemental strand, 6001552 - 6001491
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    |||||||||||||||||||||||| ||||||||||||||| || |||||||||||||||||||    
T  6001552 tgttaagagtcccacatcggatagaagatgacctgacaatatg-tttataagtgggggcaatc 6001491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 164 - 226
Target Start/End: Complemental strand, 43688276 - 43688215
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    |||||||||||||||||||||||| | ||| |||||||||||| |||||||||||||||||||    
T  43688276 tgttaagagtcccacatcggataggacatggcctgacaatgtg-tttataagtgggggcaatc 43688215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 164 - 221
Target Start/End: Complemental strand, 18826605 - 18826549
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtggggg 221  Q
    ||||||||||||||||| |||||| |||||||||||||||||| ||||||||||||||    
T  18826605 tgttaagagtcccacattggataggagatgacctgacaatgtg-tttataagtggggg 18826549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 165 - 226
Target Start/End: Complemental strand, 44874462 - 44874402
Alignment:
Q  165 gttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    ||||||||||||||||||||||| |||| ||||||||||||| |||||||||||||| ||||    
T  44874462 gttaagagtcccacatcggataggagataacctgacaatgtg-tttataagtgggggaaatc 44874402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 163 - 226
Target Start/End: Complemental strand, 48661673 - 48661611
Alignment:
Q  163 atgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    ||||||||||||||||||| ||||| |||||||||||||||||  |||||| ||||||||||||    
T  48661673 atgttaagagtcccacatcagataggagatgacctgacaatgt-atttataggtgggggcaatc 48661611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 164 - 226
Target Start/End: Complemental strand, 2404291 - 2404230
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    |||||||||||||||||||| ||| |||||  ||||||||||| |||||||||||||||||||    
T  2404291 tgttaagagtcccacatcggttaggagatggactgacaatgtg-tttataagtgggggcaatc 2404230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 164 - 226
Target Start/End: Complemental strand, 3519842 - 3519781
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    ||||||||||||||||||||||||  |||| |||||||||||| |||||||||||||| ||||    
T  3519842 tgttaagagtcccacatcggataggtgatggcctgacaatgtg-tttataagtgggggtaatc 3519781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 164 - 226
Target Start/End: Original strand, 29469572 - 29469633
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    ||||||||||||||||||||| || | ||| |||||||||||| |||||||||||||||||||    
T  29469572 tgttaagagtcccacatcggacaggacatggcctgacaatgtg-tttataagtgggggcaatc 29469633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 164 - 226
Target Start/End: Original strand, 29469807 - 29469868
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    ||||||||||||||||||||| || | ||| |||||||||||| |||||||||||||||||||    
T  29469807 tgttaagagtcccacatcggacaggacatggcctgacaatgtg-tttataagtgggggcaatc 29469868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 163 - 226
Target Start/End: Original strand, 1596560 - 1596622
Alignment:
Q  163 atgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    |||||||||||||||||||||| || | ||| |||||||||||| || ||||||||||||||||    
T  1596560 atgttaagagtcccacatcggacaggacatggcctgacaatgtg-ttaataagtgggggcaatc 1596622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 164 - 226
Target Start/End: Original strand, 1596795 - 1596856
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    ||||||||||||||||||||| || | ||| ||| ||||||| ||||||||||||||||||||    
T  1596795 tgttaagagtcccacatcggacaggacatggcctaacaatgt-ttttataagtgggggcaatc 1596856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 164 - 226
Target Start/End: Complemental strand, 21055070 - 21055009
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    |||||||||||||| |||||||||  |||| ||||||||| || |||||||||||||||||||    
T  21055070 tgttaagagtcccatatcggataggtgatggcctgacaatatg-tttataagtgggggcaatc 21055009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 164 - 226
Target Start/End: Original strand, 21861261 - 21861322
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    ||||||||||||||||||||| || | ||| |||||||||||| |||||||||| ||||||||    
T  21861261 tgttaagagtcccacatcggacaggacatggcctgacaatgtg-tttataagtgagggcaatc 21861322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 164 - 226
Target Start/End: Original strand, 21861496 - 21861557
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    |||||||||| |||||||||| || | ||| |||||||||||| |||||||||||||||||||    
T  21861496 tgttaagagttccacatcggacaggacatggcctgacaatgtg-tttataagtgggggcaatc 21861557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 164 - 226
Target Start/End: Complemental strand, 26240033 - 26239972
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    |||||||||||| ||||||||||| | |||  ||||||||||| |||||||||||||||||||    
T  26240033 tgttaagagtccgacatcggataggacatggtctgacaatgtg-tttataagtgggggcaatc 26239972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 164 - 226
Target Start/End: Original strand, 47710410 - 47710471
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    ||||||||||| ||||||||||||  |||| ||| |||||||| |||||||||||||||||||    
T  47710410 tgttaagagtctcacatcggataggtgatggccttacaatgtg-tttataagtgggggcaatc 47710471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 164 - 226
Target Start/End: Original strand, 47722066 - 47722127
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    ||||||||||| ||||||||||||  |||| ||| |||||||| |||||||||||||||||||    
T  47722066 tgttaagagtctcacatcggataggtgatggccttacaatgtg-tttataagtgggggcaatc 47722127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 164 - 209
Target Start/End: Complemental strand, 14540858 - 14540813
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttt 209  Q
    |||||||| || |||||||||||| |||||||||||||||||||||    
T  14540858 tgttaagaatcacacatcggataggagatgacctgacaatgtgttt 14540813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 164 - 209
Target Start/End: Original strand, 28080632 - 28080677
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttt 209  Q
    ||||||||||| |||||||||||  |||||||||||||||||||||    
T  28080632 tgttaagagtctcacatcggataagagatgacctgacaatgtgttt 28080677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 164 - 221
Target Start/End: Original strand, 46452599 - 46452655
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtggggg 221  Q
    |||||||||||||||||||||||| | ||||||  |||||||| ||||||||||||||    
T  46452599 tgttaagagtcccacatcggataggacatgaccacacaatgtg-tttataagtggggg 46452655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 164 - 220
Target Start/End: Original strand, 3392949 - 3393004
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggg 220  Q
    ||||||||||| ||||||||||||  |||| |||||||||||| |||||||||||||    
T  3392949 tgttaagagtctcacatcggataggtgatggcctgacaatgtg-tttataagtgggg 3393004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 227
Target Start/End: Complemental strand, 2544332 - 2544270
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatct 227  Q
    |||||||||||||||||||| ||| || ||  |||||||| || ||||||||||||||||||||    
T  2544332 tgttaagagtcccacatcggttaggagttggtctgacaatttg-tttataagtgggggcaatct 2544270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 163 - 226
Target Start/End: Complemental strand, 2544565 - 2544503
Alignment:
Q  163 atgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    |||||||||||||||| |||| ||| || || ||||||||| || |||||||||||||||||||    
T  2544565 atgttaagagtcccacgtcggttaggagttggcctgacaatttg-tttataagtgggggcaatc 2544503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 227
Target Start/End: Complemental strand, 26562190 - 26562128
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatct 227  Q
    ||||||||||| |||||||| ||| || || ||||||||| || ||||||||||||||||||||    
T  26562190 tgttaagagtctcacatcggttaggagttggcctgacaatttg-tttataagtgggggcaatct 26562128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 226
Target Start/End: Complemental strand, 2404525 - 2404464
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    ||||||||||||||| |||||||| ||| |  ||||||||||| ||||||||| |||||||||    
T  2404525 tgttaagagtcccacgtcggataggagacggactgacaatgtg-tttataagtaggggcaatc 2404464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 226
Target Start/End: Original strand, 4267821 - 4267882
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    |||||||||||||||||||| ||| || ||  |||||||| || |||||||||||||||||||    
T  4267821 tgttaagagtcccacatcggttaggagttggtctgacaatttg-tttataagtgggggcaatc 4267882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 226
Target Start/End: Original strand, 4268021 - 4268082
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    |||||||||||||||||| | ||| || || ||||||||| || |||||||||||||||||||    
T  4268021 tgttaagagtcccacatcagttaggagttggcctgacaatttg-tttataagtgggggcaatc 4268082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 226
Target Start/End: Original strand, 6634822 - 6634883
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    ||||||||||| |||||||| ||| || || ||||||||| || |||||||||||||||||||    
T  6634822 tgttaagagtctcacatcggttaggagttggcctgacaatttg-tttataagtgggggcaatc 6634883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 226
Target Start/End: Original strand, 25620338 - 25620399
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    |||||||||||| ||||| ||||| | ||||||||||||||||  |||||||| |||||||||    
T  25620338 tgttaagagtcctacatcagataggacatgacctgacaatgtg-cttataagtaggggcaatc 25620399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 226
Target Start/End: Complemental strand, 31485541 - 31485480
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    |||||||||||||||||  ||||   |||| |||||||||||| |||||||||||||||||||    
T  31485541 tgttaagagtcccacataagatatgtgatggcctgacaatgtg-tttataagtgggggcaatc 31485480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 226
Target Start/End: Original strand, 34027360 - 34027421
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    |||||||| ||||||||||| ||| || || ||||||||| || |||||||||||||||||||    
T  34027360 tgttaagaatcccacatcggttaggagttggcctgacaatttg-tttataagtgggggcaatc 34027421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 226
Target Start/End: Original strand, 34027594 - 34027655
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    |||||||||||||||||| | ||| || || ||||||||| || |||||||||||||||||||    
T  34027594 tgttaagagtcccacatcagttagaagttggcctgacaatttg-tttataagtgggggcaatc 34027655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 226
Target Start/End: Complemental strand, 35308263 - 35308202
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    |||||||| || |||||| ||||| ||||| | |||||||||| |||||||||||||||||||    
T  35308263 tgttaagaatctcacatcagataggagatgtcatgacaatgtg-tttataagtgggggcaatc 35308202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 226
Target Start/End: Complemental strand, 36277343 - 36277282
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    ||||||||||| ||||||||| |  | ||| |||||||||||| |||||||||||||||||||    
T  36277343 tgttaagagtctcacatcggacaagacatggcctgacaatgtg-tttataagtgggggcaatc 36277282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 226
Target Start/End: Complemental strand, 48243554 - 48243493
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    ||||||||||||||||| | |||   |||| |||||||||||| |||||||||||||||||||    
T  48243554 tgttaagagtcccacattgaatatgtgatggcctgacaatgtg-tttataagtgggggcaatc 48243493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 164 - 225
Target Start/End: Original strand, 17202146 - 17202206
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaat 225  Q
    |||||||||||||||||||| ||  || || ||||||||| || ||||||||||||||||||    
T  17202146 tgttaagagtcccacatcggttaagagttggcctgacaatttg-tttataagtgggggcaat 17202206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 166 - 227
Target Start/End: Complemental strand, 33996426 - 33996366
Alignment:
Q  166 ttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatct 227  Q
    |||||||||||||||||||||| | ||| ||| | |||||  ||||||||||||||||||||    
T  33996426 ttaagagtcccacatcggataggacatggcctaataatgt-atttataagtgggggcaatct 33996366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 162 - 226
Target Start/End: Complemental strand, 3038203 - 3038140
Alignment:
Q  162 aatgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    ||||||||||||||||||||| |||  ||||   || |||||||| |||||||||||||||||||    
T  3038203 aatgttaagagtcccacatcgaataagagattgtctaacaatgtg-tttataagtgggggcaatc 3038140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 47; Significance: 6e-18; HSPs: 40)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 164 - 226
Target Start/End: Original strand, 35772231 - 35772292
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    |||||||||||||||||||||||| ||||| |||||||||||| |||||||||||||||||||    
T  35772231 tgttaagagtcccacatcggataggagatggcctgacaatgtg-tttataagtgggggcaatc 35772292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 164 - 227
Target Start/End: Original strand, 16163134 - 16163196
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatct 227  Q
    ||||||||||||||||||||||||  |||||| |||||||||| ||||||||||||||||||||    
T  16163134 tgttaagagtcccacatcggataggtgatgacttgacaatgtg-tttataagtgggggcaatct 16163196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 169 - 226
Target Start/End: Original strand, 40079124 - 40079180
Alignment:
Q  169 agagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    ||||||| ||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  40079124 agagtcctacatcggataggagatgacctgacaatgtg-tttataagtgggggcaatc 40079180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 167 - 226
Target Start/End: Complemental strand, 2859506 - 2859448
Alignment:
Q  167 taagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    |||||||||||||||||||||  |||| |||||||||||| |||||||||||||||||||    
T  2859506 taagagtcccacatcggataggtgatggcctgacaatgtg-tttataagtgggggcaatc 2859448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 164 - 226
Target Start/End: Complemental strand, 15986450 - 15986389
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    |||||||||||| ||||||||||| ||||  |||||||||||| |||||||||||||||||||    
T  15986450 tgttaagagtcctacatcggataggagatagcctgacaatgtg-tttataagtgggggcaatc 15986389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 164 - 226
Target Start/End: Complemental strand, 20208643 - 20208582
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    |||||||||||||||||||||||| | |||  ||||||||||| |||||||||||||||||||    
T  20208643 tgttaagagtcccacatcggataggacatggtctgacaatgtg-tttataagtgggggcaatc 20208582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 164 - 226
Target Start/End: Original strand, 25713360 - 25713421
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    ||||||||||||||||||||||||  ||||  ||||||||||| |||||||||||||||||||    
T  25713360 tgttaagagtcccacatcggataggtgatggtctgacaatgtg-tttataagtgggggcaatc 25713421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 164 - 226
Target Start/End: Original strand, 26177110 - 26177171
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    ||||||||||||||||||||| || | |||||||||||| ||| |||||||||||||||||||    
T  26177110 tgttaagagtcccacatcggacaggacatgacctgacaacgtg-tttataagtgggggcaatc 26177171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 164 - 226
Target Start/End: Complemental strand, 51459947 - 51459886
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    ||||||||||||||||||||||||  |||| ||| |||||||| |||||||||||||||||||    
T  51459947 tgttaagagtcccacatcggataggtgatggcctaacaatgtg-tttataagtgggggcaatc 51459886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 164 - 226
Target Start/End: Complemental strand, 52650888 - 52650827
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    ||||| |||||||||||||||||| ||||| || ||||||||| |||||||||||||||||||    
T  52650888 tgttaggagtcccacatcggataggagatggccggacaatgtg-tttataagtgggggcaatc 52650827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 164 - 227
Target Start/End: Complemental strand, 17452945 - 17452883
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatct 227  Q
    |||||||||||||||||||||||  | ||| |||||||||||  ||||||||||||||||||||    
T  17452945 tgttaagagtcccacatcggataagacatggcctgacaatgt-atttataagtgggggcaatct 17452883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 164 - 226
Target Start/End: Original strand, 3169967 - 3170029
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    |||||||||||||||||||| ||| || ||  |||||||| ||||||||||||| ||||||||    
T  3169967 tgttaagagtcccacatcggttaggagttggtctgacaatttgttttataagtgagggcaatc 3170029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 164 - 226
Target Start/End: Complemental strand, 4113123 - 4113062
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    |||||| ||||||||||||||| | | ||| |||||||||||| |||||||||||||||||||    
T  4113123 tgttaaaagtcccacatcggatgggacatggcctgacaatgtg-tttataagtgggggcaatc 4113062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 164 - 226
Target Start/End: Complemental strand, 25145837 - 25145776
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    ||||||||||| ||||||||||||  ||||||||||||||||  ||||| |||||||||||||    
T  25145837 tgttaagagtctcacatcggataggtgatgacctgacaatgt-atttattagtgggggcaatc 25145776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 168 - 226
Target Start/End: Complemental strand, 39348232 - 39348175
Alignment:
Q  168 aagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    |||||||||||||||||||| ||||  |||||||||||| ||||||||||| |||||||    
T  39348232 aagagtcccacatcggataggagatagcctgacaatgtg-tttataagtggaggcaatc 39348175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 164 - 226
Target Start/End: Original strand, 52961549 - 52961610
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    ||||||| |||||||||||||||| |||||  ||||||||||| |||||||||| ||||||||    
T  52961549 tgttaagtgtcccacatcggataggagatggtctgacaatgtg-tttataagtgagggcaatc 52961610  T

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Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 164 - 221
Target Start/End: Complemental strand, 4112888 - 4112832
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtggggg 221  Q
    |||||||||||||||||||||| | | ||| |||||||||||| ||||||||||||||    
T  4112888 tgttaagagtcccacatcggatgggacatggcctgacaatgtg-tttataagtggggg 4112832  T

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Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 164 - 209
Target Start/End: Original strand, 17412534 - 17412579
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttt 209  Q
    |||||| ||||||||||| ||||| |||||||||||||||||||||    
T  17412534 tgttaaaagtcccacatcagataggagatgacctgacaatgtgttt 17412579  T

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Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 168 - 221
Target Start/End: Original strand, 22100053 - 22100105
Alignment:
Q  168 aagagtcccacatcggatagtagatgacctgacaatgtgttttataagtggggg 221  Q
    |||||||| ||||| |||| ||||||||||||||||||| ||||||||||||||    
T  22100053 aagagtcctacatccgatattagatgacctgacaatgtg-tttataagtggggg 22100105  T

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Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 164 - 225
Target Start/End: Complemental strand, 26173573 - 26173513
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaat 225  Q
    |||||||||||||||||| ||||  |||||  ||||||||||| ||||||||||||||||||    
T  26173573 tgttaagagtcccacatcagatatgagatggtctgacaatgtg-tttataagtgggggcaat 26173513  T

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Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 164 - 209
Target Start/End: Original strand, 33156405 - 33156450
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttt 209  Q
    ||||||||||||||||||| || | |||||||||||||||||||||    
T  33156405 tgttaagagtcccacatcgtattggagatgacctgacaatgtgttt 33156450  T

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Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 164 - 209
Target Start/End: Original strand, 38080572 - 38080617
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttt 209  Q
    |||||||||||||||||||||| | ||||| |||||||||||||||    
T  38080572 tgttaagagtcccacatcggatgggagatggcctgacaatgtgttt 38080617  T

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Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 227
Target Start/End: Original strand, 3169733 - 3169795
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatct 227  Q
    |||||||||||||||||||| ||| || ||  |||||||| || ||||||||||||||||||||    
T  3169733 tgttaagagtcccacatcggttaggagttggtctgacaatttg-tttataagtgggggcaatct 3169795  T

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Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 226
Target Start/End: Complemental strand, 4098519 - 4098458
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    ||||||||||| ||||||||||| ||||||   ||| |||||| |||||||||||||||||||    
T  4098519 tgttaagagtcgcacatcggataatagatggtttgataatgtg-tttataagtgggggcaatc 4098458  T

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Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 226
Target Start/End: Complemental strand, 4112657 - 4112596
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    ||||||||||||||||||||| || | ||| | |||||||||| ||||||||| |||||||||    
T  4112657 tgttaagagtcccacatcggacaggacatggcatgacaatgtg-tttataagtaggggcaatc 4112596  T

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Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 226
Target Start/End: Complemental strand, 8870806 - 8870745
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    |||||||||||||||||||||| |  ||||   |||||||||| |||||||||||||||||||    
T  8870806 tgttaagagtcccacatcggatcggtgatggtgtgacaatgtg-tttataagtgggggcaatc 8870745  T

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Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 226
Target Start/End: Original strand, 17468315 - 17468372
Alignment:
Q  168 aagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    |||||||||||||||||||  |||||  |||||||| || |||||||||||||||||||    
T  17468315 aagagtcccacatcggataagagatggtctgacaatatg-tttataagtgggggcaatc 17468372  T

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Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 226
Target Start/End: Complemental strand, 25145602 - 25145541
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    ||||||||||| ||||||||||||  ||||  ||||||||||| ||||| |||||||||||||    
T  25145602 tgttaagagtctcacatcggataggtgatggtctgacaatgtg-tttattagtgggggcaatc 25145541  T

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Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 226
Target Start/End: Original strand, 26176875 - 26176936
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    ||||||||||||||||||||| || | ||| ||||||||||||  ||||||||| ||||||||    
T  26176875 tgttaagagtcccacatcggacaggacatggcctgacaatgtg-cttataagtgagggcaatc 26176936  T

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Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 226
Target Start/End: Complemental strand, 26865475 - 26865414
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    ||||||| ||||||||||||| |  | |||||||||||||||  |||||||||||||||||||    
T  26865475 tgttaagtgtcccacatcggacaagacatgacctgacaatgt-atttataagtgggggcaatc 26865414  T

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Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 218
Target Start/End: Complemental strand, 35303557 - 35303504
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgg 218  Q
    |||||||||||||||||||||||| | |||| ||||||||||  |||||||||||    
T  35303557 tgttaagagtcccacatcggatagaacatgatctgacaatgt-atttataagtgg 35303504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 226
Target Start/End: Original strand, 38668327 - 38668388
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    |||||||||||||||||||||||   ||||   |||||||||| |||||||||||||||||||    
T  38668327 tgttaagagtcccacatcggatatgtgatggtttgacaatgtg-tttataagtgggggcaatc 38668388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 226
Target Start/End: Complemental strand, 51459822 - 51459761
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    |||||||||||||| |||||||||  |||  ||| |||||||| |||||||||||||||||||    
T  51459822 tgttaagagtcccatatcggataggtgatagcctaacaatgtg-tttataagtgggggcaatc 51459761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 226
Target Start/End: Complemental strand, 51460324 - 51460263
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    |||||||||||| ||||| |||||  |||||||| |||||||| ||||||||| |||||||||    
T  51460324 tgttaagagtccaacatcagataggtgatgacctaacaatgtg-tttataagtaggggcaatc 51460263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 164 - 225
Target Start/End: Original strand, 7307688 - 7307748
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaat 225  Q
    |||||||||||| |||||||| |  ||||||||| |||||||| ||||||||||| ||||||    
T  7307688 tgttaagagtccaacatcggacataagatgacctaacaatgtg-tttataagtggaggcaat 7307748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 164 - 209
Target Start/End: Original strand, 33156936 - 33156981
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttt 209  Q
    |||||||||| ||||||||||||| |||||  ||||||||||||||    
T  33156936 tgttaagagttccacatcggataggagatggtctgacaatgtgttt 33156981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 164 - 205
Target Start/End: Original strand, 35772002 - 35772043
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgt 205  Q
    ||||||||||| |||||| ||||| |||||||||||||||||    
T  35772002 tgttaagagtctcacatcagataggagatgacctgacaatgt 35772043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 164 - 225
Target Start/End: Original strand, 35892258 - 35892318
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaat 225  Q
    |||||||||||||||||| ||||  |||||  ||||||||||  ||||||||||||||||||    
T  35892258 tgttaagagtcccacatcagatataagatggtctgacaatgt-atttataagtgggggcaat 35892318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 163 - 220
Target Start/End: Complemental strand, 42586556 - 42586500
Alignment:
Q  163 atgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggg 220  Q
    |||||||||||| |||||||||||  ||||| |||||||||||| | |||||||||||    
T  42586556 atgttaagagtctcacatcggataagagatggcctgacaatgtg-tatataagtgggg 42586500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 164 - 209
Target Start/End: Complemental strand, 51460199 - 51460154
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttt 209  Q
    ||||||||||||||||||||||||  |||| ||| |||||||||||    
T  51460199 tgttaagagtcccacatcggataggtgatggcctaacaatgtgttt 51460154  T

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Target: chr5 (Bit Score: 44; Significance: 4e-16; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 159 - 226
Target Start/End: Complemental strand, 41667115 - 41667049
Alignment:
Q  159 gtaaatgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    |||||||||||||||||||||||||| || | ||| |||||||||||| |||||||||||||||||||    
T  41667115 gtaaatgttaagagtcccacatcggacaggacatggcctgacaatgtg-tttataagtgggggcaatc 41667049  T

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Target: chr5; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 164 - 226
Target Start/End: Complemental strand, 30770166 - 30770105
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    |||||||||||||||||||||||| | ||||||||||||||| ||||| ||||||||||||||    
T  30770166 tgttaagagtcccacatcggataggacatgacctgacaatgt-ttttaaaagtgggggcaatc 30770105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 166 - 225
Target Start/End: Original strand, 9368799 - 9368857
Alignment:
Q  166 ttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaat 225  Q
    |||||||||||||||||||||| ||||| | |||||||||| ||||||||||||||||||    
T  9368799 ttaagagtcccacatcggataggagatggcatgacaatgtg-tttataagtgggggcaat 9368857  T

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Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 164 - 226
Target Start/End: Complemental strand, 95383 - 95322
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    ||||||||||| ||||||||||||  ||||||||||||||||| ||||||||||||| |||||    
T  95383 tgttaagagtcacacatcggataggtgatgacctgacaatgtg-tttataagtggggacaatc 95322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 164 - 226
Target Start/End: Complemental strand, 2063850 - 2063789
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    |||||||||||||||||||||||| | |||  ||||||||||| |||||||||||||||||||    
T  2063850 tgttaagagtcccacatcggatagaacatggtctgacaatgtg-tttataagtgggggcaatc 2063789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 164 - 226
Target Start/End: Complemental strand, 4481680 - 4481619
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    |||||||||||||||||||||||| || || |||||||||||| ||||||| |||||||||||    
T  4481680 tgttaagagtcccacatcggatagaagttggcctgacaatgtg-tttataaatgggggcaatc 4481619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 164 - 226
Target Start/End: Original strand, 6637804 - 6637865
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    |||||||||||||||||||| ||| |||||||||||||||||| | |||||||||| ||||||    
T  6637804 tgttaagagtcccacatcggttaggagatgacctgacaatgtg-tctataagtgggtgcaatc 6637865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 164 - 226
Target Start/End: Complemental strand, 17352551 - 17352491
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    ||||||||||||||||||| |||  |||||||||||||||||| |||||||||||||||||||    
T  17352551 tgttaagagtcccacatcg-ataagagatgacctgacaatgtg-tttataagtgggggcaatc 17352491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 164 - 226
Target Start/End: Complemental strand, 24346618 - 24346557
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    |||||||||||||||||||||||| | ||| |||||||||||| |||||||||||||| ||||    
T  24346618 tgttaagagtcccacatcggataggacatggcctgacaatgtg-tttataagtgggggtaatc 24346557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 164 - 226
Target Start/End: Complemental strand, 41666874 - 41666813
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    ||||||||||||||||||||| || | ||| |||||||||||| |||||||||||||||||||    
T  41666874 tgttaagagtcccacatcggacaggacatggcctgacaatgtg-tttataagtgggggcaatc 41666813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 164 - 221
Target Start/End: Complemental strand, 8081231 - 8081175
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtggggg 221  Q
    |||||||||||||||||||||||| | ||| |||||||||||| ||||||||||||||    
T  8081231 tgttaagagtcccacatcggataggacatggcctgacaatgtg-tttataagtggggg 8081175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 164 - 220
Target Start/End: Complemental strand, 24269987 - 24269932
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggg 220  Q
    |||||||||||||||||||||||| | ||| |||||||||||| |||||||||||||    
T  24269987 tgttaagagtcccacatcggataggacatggcctgacaatgtg-tttataagtgggg 24269932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 166 - 225
Target Start/End: Complemental strand, 13701183 - 13701125
Alignment:
Q  166 ttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaat 225  Q
    |||||||||||||||||||||| | |||| | ||||||||| ||||||||||||||||||    
T  13701183 ttaagagtcccacatcggataggaaatgatccgacaatgtg-tttataagtgggggcaat 13701125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 164 - 226
Target Start/End: Complemental strand, 6919311 - 6919250
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    ||||||||||||||||||  |||  |||||||||||||||||| ||||| |||||||||||||    
T  6919311 tgttaagagtcccacatcaaataagagatgacctgacaatgtg-tttattagtgggggcaatc 6919250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 164 - 226
Target Start/End: Complemental strand, 18333582 - 18333521
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    |||||||| ||||||||||||||| |||||  ||||||||||| |||||||||||||| ||||    
T  18333582 tgttaagaatcccacatcggataggagatggtctgacaatgtg-tttataagtgggggtaatc 18333521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 164 - 226
Target Start/End: Original strand, 19705870 - 19705931
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    |||||||||||||||||||| ||| | ||  |||||||||||| |||||||||||||||||||    
T  19705870 tgttaagagtcccacatcgggtaggacatagcctgacaatgtg-tttataagtgggggcaatc 19705931  T

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Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 164 - 226
Target Start/End: Complemental strand, 20510759 - 20510698
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    ||||||||| ||||||||||||||  |||| ||||||||| || |||||||||||||||||||    
T  20510759 tgttaagagccccacatcggataggtgatggcctgacaatatg-tttataagtgggggcaatc 20510698  T

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Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 164 - 226
Target Start/End: Complemental strand, 33337355 - 33337294
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    ||||||||||||||||| ||||||  |||| ||||||||| || |||||||||||||||||||    
T  33337355 tgttaagagtcccacattggataggtgatggcctgacaatatg-tttataagtgggggcaatc 33337294  T

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Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 170 - 227
Target Start/End: Complemental strand, 2062049 - 2061993
Alignment:
Q  170 gagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatct 227  Q
    |||||||||| ||||||| | ||| |||||||||||| ||||||||||||||||||||    
T  2062049 gagtcccacaccggatagaacatggcctgacaatgtg-tttataagtgggggcaatct 2061993  T

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Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 164 - 205
Target Start/End: Complemental strand, 33337568 - 33337527
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgt 205  Q
    ||||||||||||||||||||||||  ||||||||||||||||    
T  33337568 tgttaagagtcccacatcggataggtgatgacctgacaatgt 33337527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 170 - 226
Target Start/End: Original strand, 15480295 - 15480350
Alignment:
Q  170 gagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    ||||||||||||||||||  ||||  ||||||||||| |||||||||||||||||||    
T  15480295 gagtcccacatcggataggtgatggtctgacaatgtg-tttataagtgggggcaatc 15480350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 227
Target Start/End: Complemental strand, 17352786 - 17352723
Alignment:
Q  163 atgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatct 227  Q
    |||||||||||||||||||| ||   ||||||||| |||||||| |||||||||||||| |||||    
T  17352786 atgttaagagtcccacatcgaatgagagatgacctaacaatgtg-tttataagtgggggtaatct 17352723  T

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Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 171 - 226
Target Start/End: Complemental strand, 6413536 - 6413482
Alignment:
Q  171 agtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    |||| ||||| |||||  |||||||||||||||||| |||||||||||||||||||    
T  6413536 agtctcacattggatatgagatgacctgacaatgtg-tttataagtgggggcaatc 6413482  T

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Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 163 - 226
Target Start/End: Original strand, 24531566 - 24531627
Alignment:
Q  163 atgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    ||||||||||||||  |||||| || | |||||||||||||||| |||||||||||||||||||    
T  24531566 atgttaagagtcccg-atcggagaggacatgacctgacaatgtg-tttataagtgggggcaatc 24531627  T

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Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 203
Target Start/End: Original strand, 26245950 - 26245989
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaat 203  Q
    |||||||||||||||||||||||| ||||||| |||||||    
T  26245950 tgttaagagtcccacatcggataggagatgacatgacaat 26245989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 171 - 226
Target Start/End: Complemental strand, 30758409 - 30758355
Alignment:
Q  171 agtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    ||||||||||||||||| | ||| |||||||||||| |||||||| ||||||||||    
T  30758409 agtcccacatcggataggacatggcctgacaatgtg-tttataagggggggcaatc 30758355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 163 - 206
Target Start/End: Complemental strand, 38976916 - 38976873
Alignment:
Q  163 atgttaagagtcccacatcggatagtagatgacctgacaatgtg 206  Q
    ||||||||||||||||||| ||||| | ||||||||||||||||    
T  38976916 atgttaagagtcccacatcagataggacatgacctgacaatgtg 38976873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 226
Target Start/End: Complemental strand, 1564680 - 1564623
Alignment:
Q  168 aagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    |||||||||||||||||||  |||||  |||||||||||  ||||||||||||||||||    
T  1564680 aagagtcccacatcggataagagatggtctgacaatgtg-attataagtgggggcaatc 1564623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 226
Target Start/End: Complemental strand, 3859425 - 3859364
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    |||||||||||||| ||||||||| | ||||||||| |||||| |||||||||| || |||||    
T  3859425 tgttaagagtcccatatcggatagaacatgacctgataatgtg-tttataagtgaggacaatc 3859364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 226
Target Start/End: Original strand, 9368562 - 9368623
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    |||||||||||  ||||||||||| ||||| | |||||||||| ||||||||||| |||||||    
T  9368562 tgttaagagtcatacatcggataggagatggcgtgacaatgtg-tttataagtggaggcaatc 9368623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 209
Target Start/End: Complemental strand, 13700707 - 13700661
Alignment:
Q  164 tgttaagagtcccac-atcggatagtagatgacctgacaatgtgttt 209  Q
    ||||||||||||||| ||||||||| ||||||| |||||||||||||    
T  13700707 tgttaagagtcccaccatcggataggagatgacttgacaatgtgttt 13700661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 226
Target Start/End: Complemental strand, 17150350 - 17150289
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    |||||||||| | ||||||||||| |||||  |||| |||||| |||||||||||||||||||    
T  17150350 tgttaagagttcaacatcggataggagatggtctgaaaatgtg-tttataagtgggggcaatc 17150289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 226
Target Start/End: Original strand, 24647663 - 24647724
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    ||||||||||||||||||||||||  |||| || ||||||||| ||||||| ||| |||||||    
T  24647663 tgttaagagtcccacatcggataggtgatggccggacaatgtg-tttataactggtggcaatc 24647724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 164 - 225
Target Start/End: Complemental strand, 21210038 - 21209978
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaat 225  Q
    |||||||||||||||||||| ||| || || ||||||||| || ||||||||||||| ||||    
T  21210038 tgttaagagtcccacatcggttaggagttggcctgacaatttg-tttataagtggggacaat 21209978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 220
Target Start/End: Original strand, 8098285 - 8098340
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggg 220  Q
    |||||||||||||||||||| ||| || || ||||||||| || |||||||||||||    
T  8098285 tgttaagagtcccacatcggttaggagttggcctgacaatttg-tttataagtgggg 8098340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 226
Target Start/End: Complemental strand, 31181126 - 31181067
Alignment:
Q  166 ttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    |||||| |||||||||||||||  |||||| ||||||| || |||||| ||||||||||||    
T  31181126 ttaagattcccacatcggataggtgatgacttgacaatatg-tttatatgtgggggcaatc 31181067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 44; Significance: 4e-16; HSPs: 33)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 163 - 226
Target Start/End: Complemental strand, 35038546 - 35038484
Alignment:
Q  163 atgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    |||||||||||||||||||||||||  |||| |||||||||||| |||||||||||||||||||    
T  35038546 atgttaagagtcccacatcggataggtgatggcctgacaatgtg-tttataagtgggggcaatc 35038484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 164 - 226
Target Start/End: Complemental strand, 7697514 - 7697454
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    |||||||||||||||||||||||| |||||||| |||||| ||  ||||||||||||||||||    
T  7697514 tgttaagagtcccacatcggataggagatgaccagacaatatg--ttataagtgggggcaatc 7697454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 164 - 226
Target Start/End: Complemental strand, 16927066 - 16927005
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    |||||||||||||||||||||||| | ||| |||||||||||| |||||||||||||| ||||    
T  16927066 tgttaagagtcccacatcggatagaacatggcctgacaatgtg-tttataagtgggggtaatc 16927005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 164 - 226
Target Start/End: Complemental strand, 35038311 - 35038250
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    ||||||||||||||||||||||||  |||| |||||||||||| |||||||||||||| ||||    
T  35038311 tgttaagagtcccacatcggataggtgatggcctgacaatgtg-tttataagtgggggaaatc 35038250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 164 - 226
Target Start/End: Complemental strand, 39683385 - 39683323
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||   |||||| |||||||    
T  39683385 tgttaagagtcccacatcggatagatgatgacctgacaatgtgtttataaagtggaggcaatc 39683323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 164 - 226
Target Start/End: Original strand, 54368483 - 54368544
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    |||||||||||||||||| ||||| ||||| ||||| |||||| |||||||||||||||||||    
T  54368483 tgttaagagtcccacatccgatagaagatggcctgaaaatgtg-tttataagtgggggcaatc 54368544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 163 - 224
Target Start/End: Original strand, 34992516 - 34992576
Alignment:
Q  163 atgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaa 224  Q
    |||||||||||||||||||||||||  ||||  ||||||||||| |||||||||||||||||    
T  34992516 atgttaagagtcccacatcggataggtgatggtctgacaatgtg-tttataagtgggggcaa 34992576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 164 - 221
Target Start/End: Original strand, 39620293 - 39620349
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtggggg 221  Q
    ||||||||||| ||||||||||||  ||||||||||||||||| ||||||||||||||    
T  39620293 tgttaagagtctcacatcggataggtgatgacctgacaatgtg-tttataagtggggg 39620349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 164 - 224
Target Start/End: Original strand, 16239558 - 16239617
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaa 224  Q
    ||||||||||| |||||||||||| | ||| |||||||||||| |||||||||||||||||    
T  16239558 tgttaagagtctcacatcggataggacatggcctgacaatgtg-tttataagtgggggcaa 16239617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 164 - 226
Target Start/End: Complemental strand, 20327731 - 20327670
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    |||||||| ||||||||||||||| | ||| |||||||||||  |||||||||||||||||||    
T  20327731 tgttaagaatcccacatcggataggacatggcctgacaatgt-atttataagtgggggcaatc 20327670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 164 - 226
Target Start/End: Complemental strand, 20327966 - 20327905
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    |||||||||||||||||||| ||| || || ||||||||| || |||||||||||||||||||    
T  20327966 tgttaagagtcccacatcggttaggagttggcctgacaatttg-tttataagtgggggcaatc 20327905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 164 - 226
Target Start/End: Original strand, 22729067 - 22729128
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    |||| ||||||||||||||||||| |||||  ||||||||||| |||| ||||||||||||||    
T  22729067 tgttcagagtcccacatcggataggagatggtctgacaatgtg-tttacaagtgggggcaatc 22729128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 168 - 226
Target Start/End: Complemental strand, 30179821 - 30179764
Alignment:
Q  168 aagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    |||||||||||||| ||||  |||||||||||||||||| |||||||||||||| ||||    
T  30179821 aagagtcccacatcagataagagatgacctgacaatgtg-tttataagtgggggtaatc 30179764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 164 - 220
Target Start/End: Original strand, 31317433 - 31317488
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggg 220  Q
    |||||||||||| ||||||||||| | ||||| |||||||||| |||||||||||||    
T  31317433 tgttaagagtcctacatcggataggacatgacatgacaatgtg-tttataagtgggg 31317488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 226
Target Start/End: Original strand, 54368691 - 54368750
Alignment:
Q  166 ttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    |||||||||| ||||||||||| ||||| |||||||||||  ||||||||||| |||||||    
T  54368691 ttaagagtccaacatcggatagaagatggcctgacaatgt-atttataagtggtggcaatc 54368750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 171 - 222
Target Start/End: Original strand, 18757816 - 18757866
Alignment:
Q  171 agtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggc 222  Q
    ||||||||||||||||| || ||||||||| ||||| |||||||||||||||    
T  18757816 agtcccacatcggataggagttgacctgactatgtg-tttataagtgggggc 18757866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 226
Target Start/End: Complemental strand, 1723192 - 1723132
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    |||||||||||||||||||| ||| || || ||||||||| || |||||||||||||||||||    
T  1723192 tgttaagagtcccacatcggttag-agttggcctgacaatttg-tttataagtgggggcaatc 1723132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 226
Target Start/End: Original strand, 4155526 - 4155587
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    ||||||||||||||||||| |||| | | | |||||||||||| ||||||||||||| |||||    
T  4155526 tgttaagagtcccacatcgcataggacaaggcctgacaatgtg-tttataagtggggacaatc 4155587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 226
Target Start/End: Original strand, 11589752 - 11589813
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    ||||||||||| |||||||| ||| || || ||||||||| || |||||||||||||||||||    
T  11589752 tgttaagagtctcacatcggttaggagttggcctgacaatttg-tttataagtgggggcaatc 11589813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 205
Target Start/End: Original strand, 20303012 - 20303054
Alignment:
Q  163 atgttaagagtcccacatcggatagtagatgacctgacaatgt 205  Q
    ||||||||||||||||||||||||| | ||| |||||||||||    
T  20303012 atgttaagagtcccacatcggataggacatggcctgacaatgt 20303054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 226
Target Start/End: Complemental strand, 20303181 - 20303120
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    |||||||| ||||||||||||||  | ||| |||||||||||  |||||||||||||||||||    
T  20303181 tgttaagaatcccacatcggatatgacatggcctgacaatgt-atttataagtgggggcaatc 20303120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 226
Target Start/End: Complemental strand, 23691309 - 23691248
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    |||||||||||||||||||| ||| || |  ||||||||| || |||||||||||||||||||    
T  23691309 tgttaagagtcccacatcggttaggagttagcctgacaatttg-tttataagtgggggcaatc 23691248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 226
Target Start/End: Complemental strand, 23708109 - 23708048
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    |||||||||||||||||||| ||| || |  ||||||||| || |||||||||||||||||||    
T  23708109 tgttaagagtcccacatcggttaggagttagcctgacaatttg-tttataagtgggggcaatc 23708048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 226
Target Start/End: Complemental strand, 23726565 - 23726504
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    |||||||||||||||||||| ||| || |  ||||||||| || |||||||||||||||||||    
T  23726565 tgttaagagtcccacatcggttaggagttagcctgacaatttg-tttataagtgggggcaatc 23726504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 226
Target Start/End: Complemental strand, 23745021 - 23744960
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    |||||||||||||||||||| ||| || |  ||||||||| || |||||||||||||||||||    
T  23745021 tgttaagagtcccacatcggttaggagttagcctgacaatttg-tttataagtgggggcaatc 23744960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 226
Target Start/End: Complemental strand, 24063546 - 24063485
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    |||||||||||||||||||| ||| || |  ||||||||| || |||||||||||||||||||    
T  24063546 tgttaagagtcccacatcggttaggagttagcctgacaatttg-tttataagtgggggcaatc 24063485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 226
Target Start/End: Complemental strand, 38791567 - 38791506
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    |||||||||||||||||||||||| |||||  ||||||||||  |||||||||| || |||||    
T  38791567 tgttaagagtcccacatcggataggagatggtctgacaatgt-atttataagtgaggacaatc 38791506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 226
Target Start/End: Original strand, 39269298 - 39269359
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    ||||||||||||||||| ||| || | |||  ||||||||||| |||||||||||||||||||    
T  39269298 tgttaagagtcccacattggagagcacatggtctgacaatgtg-tttataagtgggggcaatc 39269359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 226
Target Start/End: Original strand, 54567859 - 54567920
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    |||||||||||| | ||||||||| | ||| |||||||||||| |||||||||||||| ||||    
T  54567859 tgttaagagtcctatatcggataggacatggcctgacaatgtg-tttataagtgggggaaatc 54567920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 163 - 208
Target Start/End: Complemental strand, 12930246 - 12930201
Alignment:
Q  163 atgttaagagtcccacatcggatagtagatgacctgacaatgtgtt 208  Q
    ||||||| |||| |||||||||||  ||||||||||||||||||||    
T  12930246 atgttaaaagtctcacatcggataagagatgacctgacaatgtgtt 12930201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 164 - 209
Target Start/End: Original strand, 27086554 - 27086599
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttt 209  Q
    |||||||||||||||||| |||||  |||| |||||||||||||||    
T  27086554 tgttaagagtcccacatcagataggtgatggcctgacaatgtgttt 27086599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 220
Target Start/End: Complemental strand, 3975475 - 3975420
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggg 220  Q
    ||||||||||| | ||||||||||  ||| ||||||||||||| |||||||||||||    
T  3975475 tgttaagagtcacgcatcggataggtgataacctgacaatgtg-tttataagtgggg 3975420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 220
Target Start/End: Original strand, 17638375 - 17638430
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggg 220  Q
    |||||||||||||||||||| ||| || || ||||||||| || |||||||||||||    
T  17638375 tgttaagagtcccacatcggttagaagctggcctgacaatttg-tttataagtgggg 17638430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 36)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 164 - 226
Target Start/End: Complemental strand, 17147777 - 17147716
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    |||||||||||||||||||||||| | |||||||||||||||  |||||||||||||||||||    
T  17147777 tgttaagagtcccacatcggataggacatgacctgacaatgt-atttataagtgggggcaatc 17147716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 162 - 225
Target Start/End: Complemental strand, 2736521 - 2736459
Alignment:
Q  162 aatgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaat 225  Q
    |||||||||||| ||||||||||||  ||||||||||| |||||| ||||||||||||||||||    
T  2736521 aatgttaagagttccacatcggatatgagatgacctgataatgtg-tttataagtgggggcaat 2736459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 162 - 225
Target Start/End: Complemental strand, 2737289 - 2737227
Alignment:
Q  162 aatgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaat 225  Q
    |||||||||||| ||||||||||||  ||||||||||| |||||| ||||||||||||||||||    
T  2737289 aatgttaagagttccacatcggatatgagatgacctgataatgtg-tttataagtgggggcaat 2737227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 164 - 226
Target Start/End: Complemental strand, 2736284 - 2736223
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    |||| ||||||||||||||| ||| |||||||||||||||||| ||||||||||||| |||||    
T  2736284 tgttgagagtcccacatcgggtaggagatgacctgacaatgtg-tttataagtggggacaatc 2736223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 164 - 226
Target Start/End: Complemental strand, 4868694 - 4868633
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    ||||||||||||||||||||| || | ||| |||||||||||| |||||||||||||||||||    
T  4868694 tgttaagagtcccacatcggacaggacatggcctgacaatgtg-tttataagtgggggcaatc 4868633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 164 - 226
Target Start/End: Original strand, 13353168 - 13353229
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    ||||||||||||||||||||| || | ||| |||||||||||| |||||||||||||||||||    
T  13353168 tgttaagagtcccacatcggacaggacatggcctgacaatgtg-tttataagtgggggcaatc 13353229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 164 - 226
Target Start/End: Original strand, 33796293 - 33796354
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    ||||||||||||||||||||| || | ||| |||||||||||| |||||||||||||||||||    
T  33796293 tgttaagagtcccacatcggacaggacatggcctgacaatgtg-tttataagtgggggcaatc 33796354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 160 - 220
Target Start/End: Complemental strand, 12330411 - 12330352
Alignment:
Q  160 taaatgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggg 220  Q
    |||||||||||||||||||||||||||| | |||  ||||||||||| |||||||||||||    
T  12330411 taaatgttaagagtcccacatcggataggacatggtctgacaatgtg-tttataagtgggg 12330352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 164 - 227
Target Start/End: Original strand, 24554084 - 24554146
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatct 227  Q
    |||||||||||||||||||||||| |||||  |||||||| |  ||||||||||||||||||||    
T  24554084 tgttaagagtcccacatcggataggagatggtctgacaatat-atttataagtgggggcaatct 24554146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 164 - 226
Target Start/End: Original strand, 2753225 - 2753286
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    ||||||||||||||||||||| ||  ||||| ||||||||||| |||||||||||||| ||||    
T  2753225 tgttaagagtcccacatcggaaagatgatgatctgacaatgtg-tttataagtgggggtaatc 2753286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 164 - 226
Target Start/End: Original strand, 3680213 - 3680274
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    |||||||||||||||||||||||   ||||  ||||||||||| |||||||||||||||||||    
T  3680213 tgttaagagtcccacatcggatatgtgatggtctgacaatgtg-tttataagtgggggcaatc 3680274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 164 - 226
Target Start/End: Complemental strand, 4868930 - 4868869
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    ||||||||||||||||||||| || | ||| |||| ||||||| |||||||||||||||||||    
T  4868930 tgttaagagtcccacatcggacaggacatggcctggcaatgtg-tttataagtgggggcaatc 4868869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 164 - 226
Target Start/End: Complemental strand, 6543060 - 6542999
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    |||||||||| ||||||||||||  |||||  ||||||||||| |||||||||||||||||||    
T  6543060 tgttaagagttccacatcggataagagatggtctgacaatgtg-tttataagtgggggcaatc 6542999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 164 - 226
Target Start/End: Complemental strand, 7638707 - 7638646
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    ||||||||||| ||| || ||||| ||||||||||| |||||| |||||||||||||||||||    
T  7638707 tgttaagagtctcacgtcagataggagatgacctgataatgtg-tttataagtgggggcaatc 7638646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 164 - 226
Target Start/End: Original strand, 9704987 - 9705048
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    ||||||||||| |||||||||||| | ||  |||||||||||| |||||||||||||||||||    
T  9704987 tgttaagagtctcacatcggataggacatagcctgacaatgtg-tttataagtgggggcaatc 9705048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 164 - 226
Target Start/End: Original strand, 9705221 - 9705282
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    |||||||||||||||||||||||| | ||| | | |||||||| |||||||||||||||||||    
T  9705221 tgttaagagtcccacatcggataggacatggcttaacaatgtg-tttataagtgggggcaatc 9705282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 164 - 226
Target Start/End: Original strand, 27772913 - 27772974
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    |||||||||||||||||||| ||| || || ||||||||| || |||||||||||||||||||    
T  27772913 tgttaagagtcccacatcggttaggagttggcctgacaatttg-tttataagtgggggcaatc 27772974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 166 - 220
Target Start/End: Original strand, 30256782 - 30256835
Alignment:
Q  166 ttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggg 220  Q
    ||||||||||||||||||||||  |||||||||||||| || |||||||||||||    
T  30256782 ttaagagtcccacatcggataggtgatgacctgacaatatg-tttataagtgggg 30256835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 164 - 226
Target Start/End: Original strand, 31961145 - 31961206
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    |||||||||||||||||| ||||   |||| |||||||||||| |||||||||||||||||||    
T  31961145 tgttaagagtcccacatcagatatgtgatggcctgacaatgtg-tttataagtgggggcaatc 31961206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 164 - 226
Target Start/End: Original strand, 33494506 - 33494567
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    |||||||||||||||||||||||| ||||| | ||| ||| || |||||||||||||||||||    
T  33494506 tgttaagagtcccacatcggataggagatggcttgaaaatatg-tttataagtgggggcaatc 33494567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 226
Target Start/End: Original strand, 6369431 - 6369492
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    ||||||||||||||||| ||| ||  ||||| || |||||||| |||||||||||||||||||    
T  6369431 tgttaagagtcccacattggacaggtgatgatctaacaatgtg-tttataagtgggggcaatc 6369492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 226
Target Start/End: Complemental strand, 12330061 - 12330000
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    |||||||||||||||||||||||  | ||||  | |||||||| |||||||||||||||||||    
T  12330061 tgttaagagtcccacatcggataagatatgatataacaatgtg-tttataagtgggggcaatc 12330000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 225
Target Start/End: Complemental strand, 15103041 - 15102988
Alignment:
Q  171 agtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaat 225  Q
    |||| ||||||||||||  ||||||||||||||||| |||||||| |||||||||    
T  15103041 agtctcacatcggataggtgatgacctgacaatgtg-tttataagcgggggcaat 15102988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 226
Target Start/End: Original strand, 21690689 - 21690750
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    |||||||||||||||||||| ||| |  || ||||||||| || |||||||||||||||||||    
T  21690689 tgttaagagtcccacatcggttaggatttggcctgacaatttg-tttataagtgggggcaatc 21690750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 226
Target Start/End: Original strand, 27653184 - 27653245
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    |||||||||||||||||||| ||| || || ||||||||| || |||||||||||||| ||||    
T  27653184 tgttaagagtcccacatcggttaggagttggcctgacaatttg-tttataagtgggggaaatc 27653245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 226
Target Start/End: Original strand, 27656425 - 27656486
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    |||||||||||||||||||| ||| || || ||||||||| || |||||||||||||| ||||    
T  27656425 tgttaagagtcccacatcggttaggagttggcctgacaatttg-tttataagtgggggaaatc 27656486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 226
Target Start/End: Original strand, 27772681 - 27772742
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    |||||||| ||||||||||| ||| || || ||||||||| || |||||||||||||||||||    
T  27772681 tgttaagattcccacatcggttaggagttggcctgacaatttg-tttataagtgggggcaatc 27772742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 226
Target Start/End: Complemental strand, 28868074 - 28868013
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    |||||||||||||||||||| ||  || |||||||||||| |  |||||||||||||||||||    
T  28868074 tgttaagagtcccacatcggttacgagttgacctgacaat-ttatttataagtgggggcaatc 28868013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 226
Target Start/End: Original strand, 30505704 - 30505766
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    |||||||||||||||||||||||  |||||  ||||||||||||||   |||||||| |||||    
T  30505704 tgttaagagtcccacatcggatataagatggtctgacaatgtgtttgtaaagtggggacaatc 30505766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 164 - 221
Target Start/End: Original strand, 7915817 - 7915873
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtggggg 221  Q
    |||||||||||| |||| |||||| || || |||||||||||| ||||||||||||||    
T  7915817 tgttaagagtccaacattggatagaagttggcctgacaatgtg-tttataagtggggg 7915873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 164 - 209
Target Start/End: Original strand, 13353403 - 13353448
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttt 209  Q
    ||||||||||||||||||||| || | ||| |||||||||||||||    
T  13353403 tgttaagagtcccacatcggacaggacatggcctgacaatgtgttt 13353448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 164 - 225
Target Start/End: Original strand, 19712919 - 19712979
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaat 225  Q
    |||||||||| ||||||||| ||| || || ||||||||| ||||| |||||||||||||||    
T  19712919 tgttaagagttccacatcggttaggagttggcctgacaatttgttt-ataagtgggggcaat 19712979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 164 - 205
Target Start/End: Original strand, 30505470 - 30505511
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgt 205  Q
    ||||||||||| |||||||||||| ||||| |||||||||||    
T  30505470 tgttaagagtctcacatcggataggagatggcctgacaatgt 30505511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 164 - 209
Target Start/End: Original strand, 33796528 - 33796573
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttt 209  Q
    ||||||||||||||||||||| || | ||| |||||||||||||||    
T  33796528 tgttaagagtcccacatcggacaggacatggcctgacaatgtgttt 33796573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 226
Target Start/End: Complemental strand, 25065209 - 25065150
Alignment:
Q  166 ttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    |||||||||||||||||||||| | |||  |||||||| || ||||||||| |||||||||    
T  25065209 ttaagagtcccacatcggataggacatggtctgacaatatg-tttataagtaggggcaatc 25065150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 220
Target Start/End: Original strand, 33494741 - 33494796
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggg 220  Q
    |||||||||||||||||||||||| |||||  |||||||| |  |||||||||||||    
T  33494741 tgttaagagtcccacatcggataggagatggtctgacaatat-atttataagtgggg 33494796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 42)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 164 - 226
Target Start/End: Complemental strand, 27634198 - 27634137
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    |||||||||||||||||||||||| | ||| |||||||||||| |||||||||||||||||||    
T  27634198 tgttaagagtcccacatcggataggacatggcctgacaatgtg-tttataagtgggggcaatc 27634137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 164 - 226
Target Start/End: Complemental strand, 31254524 - 31254463
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    ||||||||||||||||||||||||  |||| |||||||||||| |||||||||||||||||||    
T  31254524 tgttaagagtcccacatcggataggtgatggcctgacaatgtg-tttataagtgggggcaatc 31254463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 164 - 226
Target Start/End: Original strand, 35788861 - 35788922
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    |||||||||||||||||||||||| | ||| |||||||||||| |||||||||||||||||||    
T  35788861 tgttaagagtcccacatcggatagaacatggcctgacaatgtg-tttataagtgggggcaatc 35788922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 164 - 226
Target Start/End: Complemental strand, 39902680 - 39902619
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    |||||||||||||||||||||||| | ||| |||||||||||| |||||||||||||||||||    
T  39902680 tgttaagagtcccacatcggataggacatggcctgacaatgtg-tttataagtgggggcaatc 39902619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 163 - 226
Target Start/End: Original strand, 35788625 - 35788687
Alignment:
Q  163 atgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    ||||||||||||||||||| ||||| | ||| |||||||||||| |||||||||||||||||||    
T  35788625 atgttaagagtcccacatcagataggacatggcctgacaatgtg-tttataagtgggggcaatc 35788687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 164 - 226
Target Start/End: Original strand, 6218406 - 6218467
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    ||||||||||| |||||| ||||| ||||||||| |||||||| |||||||||||||||||||    
T  6218406 tgttaagagtctcacatcagataggagatgacctaacaatgtg-tttataagtgggggcaatc 6218467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 164 - 226
Target Start/End: Original strand, 9279194 - 9279255
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    ||||||||||| ||||||||||||  |||| |||||||||||| |||||||||||||||||||    
T  9279194 tgttaagagtcgcacatcggataggtgatggcctgacaatgtg-tttataagtgggggcaatc 9279255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 168 - 226
Target Start/End: Original strand, 22827509 - 22827566
Alignment:
Q  168 aagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    |||||||||||||||||||| ||||| |||||||| ||| |||||||||||||||||||    
T  22827509 aagagtcccacatcggataggagatggcctgacaacgtg-tttataagtgggggcaatc 22827566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 164 - 226
Target Start/End: Original strand, 22863441 - 22863502
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    ||||||||||| ||||||||| || ||||| |||||||||||| |||||||||||||||||||    
T  22863441 tgttaagagtctcacatcggacagaagatggcctgacaatgtg-tttataagtgggggcaatc 22863502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 164 - 226
Target Start/End: Complemental strand, 27634633 - 27634572
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    |||||||||||||||||||||||| | ||| |||||||||||| ||||| |||||||||||||    
T  27634633 tgttaagagtcccacatcggataggacatggcctgacaatgtg-tttatgagtgggggcaatc 27634572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 164 - 226
Target Start/End: Complemental strand, 28245643 - 28245582
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    ||||||||||| ||||||||||||  |||| |||||||||||| |||||||||||||||||||    
T  28245643 tgttaagagtctcacatcggataggtgatggcctgacaatgtg-tttataagtgggggcaatc 28245582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 164 - 226
Target Start/End: Complemental strand, 50543684 - 50543623
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    ||||||||||||||||||||||||  |||| |||||||||||| | |||||||||||||||||    
T  50543684 tgttaagagtcccacatcggataggtgatggcctgacaatgtg-tgtataagtgggggcaatc 50543623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 164 - 227
Target Start/End: Original strand, 2516168 - 2516230
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatct 227  Q
    ||||||||||||||| |||| ||| ||||||||||||||| || |||||||||||| |||||||    
T  2516168 tgttaagagtcccacttcggttagaagatgacctgacaatatg-tttataagtgggagcaatct 2516230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 163 - 226
Target Start/End: Complemental strand, 11036864 - 11036802
Alignment:
Q  163 atgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    ||||||||||| | |||||||||||  |||| |||||||||||| |||||||||||||||||||    
T  11036864 atgttaagagtacaacatcggataggtgatggcctgacaatgtg-tttataagtgggggcaatc 11036802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 163 - 226
Target Start/End: Original strand, 21498320 - 21498382
Alignment:
Q  163 atgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    ||||||||||||||||||||| ||| || || ||||||||| || |||||||||||||||||||    
T  21498320 atgttaagagtcccacatcggttaggagttggcctgacaatttg-tttataagtgggggcaatc 21498382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 163 - 226
Target Start/End: Complemental strand, 35645883 - 35645821
Alignment:
Q  163 atgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    |||||||||||||||||||| ||||  ||||  ||||||||||| |||||||||||||||||||    
T  35645883 atgttaagagtcccacatcgaataggtgatggtctgacaatgtg-tttataagtgggggcaatc 35645821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 164 - 226
Target Start/End: Complemental strand, 980167 - 980106
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    |||||||||||||||||||| ||| || |||||||| ||| || |||||||||||||||||||    
T  980167 tgttaagagtcccacatcggttaggagttgacctgagaatttg-tttataagtgggggcaatc 980106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 164 - 226
Target Start/End: Original strand, 1518131 - 1518192
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    ||||| |||||||||||||| ||| || |||||||||||| || |||||||||||||||||||    
T  1518131 tgttatgagtcccacatcggttaggagttgacctgacaatttg-tttataagtgggggcaatc 1518192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 164 - 226
Target Start/End: Original strand, 21498762 - 21498823
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    |||||||||||||||||||| ||| || || ||||||||| || |||||||||||||||||||    
T  21498762 tgttaagagtcccacatcggttaggagttggcctgacaatttg-tttataagtgggggcaatc 21498823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 164 - 226
Target Start/End: Complemental strand, 22231190 - 22231129
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    |||||||||||| ||||||||||| | ||| |||||||||||| ||||||||||||| |||||    
T  22231190 tgttaagagtcctacatcggataggatatggcctgacaatgtg-tttataagtggggacaatc 22231129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 164 - 226
Target Start/End: Complemental strand, 35797094 - 35797033
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    |||||||||||||| |||||| || ||||||| ||||||| || |||||||||||||||||||    
T  35797094 tgttaagagtcccatatcggacaggagatgacatgacaatatg-tttataagtgggggcaatc 35797033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 164 - 226
Target Start/End: Complemental strand, 40717323 - 40717262
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    |||||||||||||||||| || || | |||||||||||||||| ||||||||||||| |||||    
T  40717323 tgttaagagtcccacatcagacagaacatgacctgacaatgtg-tttataagtggggacaatc 40717262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 168 - 226
Target Start/End: Complemental strand, 44118972 - 44118915
Alignment:
Q  168 aagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    |||||||||||||||||||  ||||| |||||||||||| |||||||||||||| ||||    
T  44118972 aagagtcccacatcggataagagatggcctgacaatgtg-tttataagtgggggtaatc 44118915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 160 - 226
Target Start/End: Original strand, 52559530 - 52559595
Alignment:
Q  160 taaatgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    |||||||||| |||| ||||| |||||  | |||||||||||||||| |||||||||||||||||||    
T  52559530 taaatgttaaaagtctcacattggatatgacatgacctgacaatgtg-tttataagtgggggcaatc 52559595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 164 - 226
Target Start/End: Complemental strand, 53828406 - 53828345
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    |||||||||||||||||||| ||| || || ||||||||| || |||||||||||||||||||    
T  53828406 tgttaagagtcccacatcggttaggagttggcctgacaatttg-tttataagtgggggcaatc 53828345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 164 - 225
Target Start/End: Original strand, 20821940 - 20822000
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaat 225  Q
    |||||||||||||||||||| ||| || || ||||||||| || ||||||||||||||||||    
T  20821940 tgttaagagtcccacatcggttaggagttggcctgacaatttg-tttataagtgggggcaat 20822000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 164 - 220
Target Start/End: Original strand, 17111735 - 17111790
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggg 220  Q
    |||||||||||||||||| |||||  |||| |||||||||||| |||||||||||||    
T  17111735 tgttaagagtcccacatcagataggtgatggcctgacaatgtg-tttataagtgggg 17111790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 219
Target Start/End: Original strand, 21684965 - 21685019
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtggg 219  Q
    ||||||||||| |||||||||||| | ||| |||||||||||| ||||||||||||    
T  21684965 tgttaagagtctcacatcggataggacatggcctgacaatgtg-tttataagtggg 21685019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 163 - 226
Target Start/End: Complemental strand, 54055150 - 54055088
Alignment:
Q  163 atgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    ||||||||||||||||||||| ||| || || ||| ||||| || |||||||||||||||||||    
T  54055150 atgttaagagtcccacatcggttagaagttggcctaacaatttg-tttataagtgggggcaatc 54055088  T

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Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 226
Target Start/End: Original strand, 5846346 - 5846407
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    |||||||||||||||||||| ||| || || | ||||||| || |||||||||||||||||||    
T  5846346 tgttaagagtcccacatcggttaggagttggcatgacaatttg-tttataagtgggggcaatc 5846407  T

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Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 226
Target Start/End: Complemental strand, 11036628 - 11036567
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    |||||||||||||| ||| |||||  |||||| |||||||||| ||||||||| |||||||||    
T  11036628 tgttaagagtcccaaatcagataggtgatgacatgacaatgtg-tttataagttggggcaatc 11036567  T

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Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 226
Target Start/End: Complemental strand, 22845564 - 22845503
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    |||||||||||||||||| ||||  | ||| |||||||||||| |||||||||||||| ||||    
T  22845564 tgttaagagtcccacatcagatatgacatggcctgacaatgtg-tttataagtgggggtaatc 22845503  T

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Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 226
Target Start/End: Complemental strand, 35796859 - 35796798
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    |||||||||| |||||||||| || | ||| | |||||||||| |||||||||||||||||||    
T  35796859 tgttaagagttccacatcggacaggacatggcatgacaatgtg-tttataagtgggggcaatc 35796798  T

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Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 226
Target Start/End: Complemental strand, 35819245 - 35819184
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    |||||||||||||||||||| ||| || || ||||||||| || |||||| ||||||||||||    
T  35819245 tgttaagagtcccacatcggttaggagttggcctgacaatttg-tttatatgtgggggcaatc 35819184  T

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Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 226
Target Start/End: Complemental strand, 45784995 - 45784934
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    ||||||||||||||||||||||||  |||||| ||||| | || ||||||||||| |||||||    
T  45784995 tgttaagagtcccacatcggataggtgatgacttgacagtatg-tttataagtggcggcaatc 45784934  T

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Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 226
Target Start/End: Complemental strand, 50543447 - 50543386
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    ||||||||| ||||||||||||||  ||||  ||||||||||| | |||||||||||||||||    
T  50543447 tgttaagagccccacatcggataggtgatggtctgacaatgtg-tgtataagtgggggcaatc 50543386  T

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Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 226
Target Start/End: Complemental strand, 53815046 - 53814985
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    |||||||||| ||||||||| ||| || || ||||||||| ||||| ||||||||||||||||    
T  53815046 tgttaagagttccacatcggttaggagttggcctgacaatttgttt-ataagtgggggcaatc 53814985  T

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Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 226
Target Start/End: Complemental strand, 53828640 - 53828579
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    |||||||||| ||||||||| ||| || || ||||||||| ||||| ||||||||||||||||    
T  53828640 tgttaagagttccacatcggttaggagttggcctgacaatttgttt-ataagtgggggcaatc 53828579  T

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Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 225
Target Start/End: Complemental strand, 54054923 - 54054862
Alignment:
Q  163 atgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaat 225  Q
    ||||||||||||||||||||  ||| || |||||| ||||| || ||||||||||||||||||    
T  54054923 atgttaagagtcccacatcgattaggagttgacctaacaatttg-tttataagtgggggcaat 54054862  T

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Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 164 - 225
Target Start/End: Original strand, 52559771 - 52559831
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaat 225  Q
    |||||| | ||||||||||||||| | ||||| |||||||||| |||||||||||| |||||    
T  52559771 tgttaaaaatcccacatcggataggacatgacttgacaatgtg-tttataagtgggagcaat 52559831  T

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Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 226
Target Start/End: Original strand, 35175004 - 35175063
Alignment:
Q  166 ttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    ||||||||||||||||||| || | ||| |||||||||||| |||||||| ||||| ||||    
T  35175004 ttaagagtcccacatcggacagaacatggcctgacaatgtg-tttataagagggggtaatc 35175063  T

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Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 226
Target Start/End: Original strand, 37836049 - 37836108
Alignment:
Q  166 ttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    ||||||||||||||||||| || | ||| ||| |||||||  |||||||||||||||||||    
T  37836049 ttaagagtcccacatcggacaggacatggcctaacaatgt-atttataagtgggggcaatc 37836108  T

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Target: scaffold0519 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 2)
Name: scaffold0519
Description:

Target: scaffold0519; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 164 - 226
Target Start/End: Original strand, 2118 - 2179
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    ||||||||||||||||||||| || | ||| |||||||||||| |||||||||||||||||||    
T  2118 tgttaagagtcccacatcggacaggacatggcctgacaatgtg-tttataagtgggggcaatc 2179  T

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Target: scaffold0519; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 164 - 226
Target Start/End: Original strand, 1883 - 1944
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    ||||||||||||||||||||| || | |||  ||||||||||| |||||||||||||||||||    
T  1883 tgttaagagtcccacatcggacaggacatggtctgacaatgtg-tttataagtgggggcaatc 1944  T

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Target: scaffold0001 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 165 - 223
Target Start/End: Original strand, 429841 - 429898
Alignment:
Q  165 gttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggca 223  Q
    |||||||||||||||||||||||  |||| |||||||||||| ||||||||||||||||    
T  429841 gttaagagtcccacatcggataggtgatggcctgacaatgtg-tttataagtgggggca 429898  T

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Target: scaffold0060 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 163 - 226
Target Start/End: Original strand, 20541 - 20603
Alignment:
Q  163 atgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    |||||||||||||||||||||| || | ||| |||||||||||| ||||||| |||||||||||    
T  20541 atgttaagagtcccacatcggacaggatatggcctgacaatgtg-tttataattgggggcaatc 20603  T

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Target: scaffold0092 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 164 - 226
Target Start/End: Original strand, 5622 - 5683
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    |||||||||||||||||| ||||| ||||| | |||||||||| |||||||||||||| ||||    
T  5622 tgttaagagtcccacatcagatagaagatggcatgacaatgtg-tttataagtgggggtaatc 5683  T

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Target: scaffold0050 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 165 - 226
Target Start/End: Complemental strand, 69649 - 69589
Alignment:
Q  165 gttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    ||||||||||||||| ||||||| | ||| ||||||||| || |||||||||||||||||||    
T  69649 gttaagagtcccacaacggatagaacatggcctgacaatctg-tttataagtgggggcaatc 69589  T

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Target: scaffold0481 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0481
Description:

Target: scaffold0481; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 227
Target Start/End: Complemental strand, 3588 - 3526
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatct 227  Q
    |||||||||||||||||||| ||| || |||| ||||||| || ||||||||||||| ||||||    
T  3588 tgttaagagtcccacatcggttaggagttgacatgacaatttg-tttataagtggggacaatct 3526  T

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Target: scaffold0400 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0400
Description:

Target: scaffold0400; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 166 - 221
Target Start/End: Original strand, 3813 - 3867
Alignment:
Q  166 ttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtggggg 221  Q
    ||||||||||||||||||||||  |||| |||||||||||| || |||||||||||    
T  3813 ttaagagtcccacatcggatagctgatggcctgacaatgtg-ttaataagtggggg 3867  T

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Target: scaffold0365 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0365
Description:

Target: scaffold0365; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 166 - 221
Target Start/End: Original strand, 4457 - 4511
Alignment:
Q  166 ttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtggggg 221  Q
    ||||||||||||||||||||||  |||| |||||||||||| || |||||||||||    
T  4457 ttaagagtcccacatcggatagctgatggcctgacaatgtg-ttaataagtggggg 4511  T

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Target: scaffold0129 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 165 - 220
Target Start/End: Original strand, 14506 - 14560
Alignment:
Q  165 gttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggg 220  Q
    |||||||||||||||||||||||  ||||  ||||||||||| |||||||||||||    
T  14506 gttaagagtcccacatcggataggtgatggtctgacaatgtg-tttataagtgggg 14560  T

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Target: scaffold0048 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 162 - 225
Target Start/End: Original strand, 81807 - 81869
Alignment:
Q  162 aatgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaat 225  Q
    ||||||||||||||||||||||| || | ||| ||||||||| || ||||||||||||| ||||    
T  81807 aatgttaagagtcccacatcggacagaacatggcctgacaatatg-tttataagtggggacaat 81869  T

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Target: scaffold0766 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0766
Description:

Target: scaffold0766; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 226
Target Start/End: Original strand, 6241 - 6302
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    |||||||||||||||||| ||||  ||||   ||||||||||| |||||||||||||||||||    
T  6241 tgttaagagtcccacatcagataagagatagtctgacaatgtg-tttataagtgggggcaatc 6302  T

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Target: scaffold0027 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 222
Target Start/End: Original strand, 121520 - 121577
Alignment:
Q  164 tgttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggc 222  Q
    |||||||||||| |||||||||||  |||||| |||||||||| ||| |||||||||||    
T  121520 tgttaagagtcctacatcggataggtgatgacatgacaatgtg-tttgtaagtgggggc 121577  T

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Target: scaffold0692 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0692
Description:

Target: scaffold0692; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 165 - 226
Target Start/End: Complemental strand, 5870 - 5810
Alignment:
Q  165 gttaagagtcccacatcggatagtagatgacctgacaatgtgttttataagtgggggcaatc 226  Q
    ||||||||||||||||||||||  | ||   ||||||||||| |||||||||||||||||||    
T  5870 gttaagagtcccacatcggataagacatagtctgacaatgtg-tttataagtgggggcaatc 5810  T

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