View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11932_low_86 (Length: 238)
Name: NF11932_low_86
Description: NF11932
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11932_low_86 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 223; Significance: 1e-123; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 16 - 238
Target Start/End: Original strand, 37365413 - 37365635
Alignment:
| Q |
16 |
caagtaacaacatccttatcagaactttcatcaaacacttgacgcgcatttttcaacaacccacgttcagcataaaaatgaatcaacccattcctcacaa |
115 |
Q |
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| T |
37365413 |
caagtaacaacatccttatcagaactttcatcaaacacttgacgcgcatttttcaacaacccacgttcagcataaaaatgaatcaacccattcctcacaa |
37365512 |
T |
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| Q |
116 |
gcaactcacaatcaaatcccattttccaaacaacacaatacacggattctccctcaaaaaccgtctcaaactgctgacaagccttcagcgcgaaaacaaa |
215 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37365513 |
gcaactcacaatcaaatcccattttccaaacaacacaatacacggattctccctcaaaaaccgtctcaaactgctgacaagccttcagcgcgaaaacaaa |
37365612 |
T |
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| Q |
216 |
gcttctagaatccatttcaacgc |
238 |
Q |
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||||||||||||||||||||||| |
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| T |
37365613 |
gcttctagaatccatttcaacgc |
37365635 |
T |
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