View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11932_low_98 (Length: 217)
Name: NF11932_low_98
Description: NF11932
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11932_low_98 |
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Alignment Details
Target: chr7 (Bit Score: 179; Significance: 9e-97; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 179; E-Value: 9e-97
Query Start/End: Original strand, 16 - 198
Target Start/End: Complemental strand, 39655878 - 39655696
Alignment:
| Q |
16 |
agacaaatagttcattctggactcagaatgttgtagcataattccaactggttttaaccatctttaagtcaaaacaaagtctctcaaatcaatgttttta |
115 |
Q |
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| T |
39655878 |
agacaaatagttcattctggactcagaatgttgtagcataattccaactggttttaaccatctttaagtcaaaacaaagtctctcaaatcaatgttttta |
39655779 |
T |
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| Q |
116 |
aagtccaaaagtcttttccttttatatttcttgaaattaattacatgacctggttaaaattagaggtatgcttatatcaggat |
198 |
Q |
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| T |
39655778 |
aagtccaaaagtcttttccttttatatttcttgaaattaattaaatgacctggttaaaattagaggtatgcttatatcaggat |
39655696 |
T |
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