View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11938_low_32 (Length: 229)

Name: NF11938_low_32
Description: NF11938
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11938_low_32
NF11938_low_32
[»] chr8 (48 HSPs)
chr8 (113-229)||(34332402-34332518)
chr8 (111-229)||(44935189-44935307)
chr8 (113-229)||(28090481-28090597)
chr8 (113-229)||(29773735-29773851)
chr8 (113-229)||(29459924-29460042)
chr8 (115-229)||(23286855-23286970)
chr8 (113-216)||(39170997-39171103)
chr8 (112-229)||(37511378-37511497)
chr8 (112-229)||(15725888-15726006)
chr8 (135-229)||(39171103-39171197)
chr8 (112-229)||(946259-946379)
chr8 (113-229)||(29229175-29229293)
chr8 (120-229)||(14498310-14498420)
chr8 (114-222)||(23274920-23275030)
chr8 (118-229)||(38502481-38502592)
chr8 (114-229)||(17642364-17642479)
chr8 (120-229)||(10280850-10280960)
chr8 (117-229)||(12162943-12163057)
chr8 (117-229)||(12407371-12407485)
chr8 (113-229)||(37161798-37161921)
chr8 (138-222)||(23275087-23275173)
chr8 (117-217)||(2273312-2273412)
chr8 (114-214)||(29454143-29454244)
chr8 (153-229)||(36002649-36002726)
chr8 (113-205)||(10706554-10706647)
chr8 (116-157)||(43485053-43485094)
chr8 (114-205)||(29265589-29265681)
chr8 (115-205)||(38329452-38329543)
chr8 (114-214)||(2261319-2261420)
chr8 (111-154)||(37466049-37466092)
chr8 (112-158)||(26439507-26439553)
chr8 (117-205)||(39300086-39300175)
chr8 (113-205)||(44000560-44000653)
chr8 (112-164)||(31158910-31158962)
chr8 (110-158)||(38210682-38210730)
chr8 (112-158)||(9508855-9508902)
chr8 (112-158)||(2732145-2732191)
chr8 (113-206)||(34634167-34634260)
chr8 (114-164)||(36672010-36672060)
chr8 (120-229)||(36886168-36886277)
chr8 (101-214)||(41720554-41720668)
chr8 (112-205)||(43841841-43841935)
chr8 (112-212)||(1043367-1043468)
chr8 (117-146)||(13482912-13482941)
chr8 (169-214)||(40776693-40776738)
chr8 (114-158)||(529632-529676)
chr8 (113-152)||(6799782-6799822)
chr8 (115-205)||(34165910-34166002)
[»] scaffold0077 (2 HSPs)
scaffold0077 (108-229)||(48300-48421)
scaffold0077 (108-161)||(58123-58176)
[»] chr4 (61 HSPs)
chr4 (112-229)||(55722768-55722885)
chr4 (113-229)||(48578906-48579022)
chr4 (115-229)||(41759660-41759774)
chr4 (114-229)||(28037975-28038091)
chr4 (114-229)||(47302270-47302386)
chr4 (116-229)||(53388848-53388962)
chr4 (113-229)||(11109595-11109714)
chr4 (113-229)||(51435811-51435929)
chr4 (113-229)||(3716615-3716732)
chr4 (118-229)||(30539850-30539962)
chr4 (118-229)||(34280228-34280340)
chr4 (112-229)||(38836140-38836258)
chr4 (118-229)||(33075983-33076096)
chr4 (110-229)||(52592083-52592203)
chr4 (116-229)||(37855411-37855526)
chr4 (110-226)||(30343120-30343238)
chr4 (112-229)||(37518963-37519081)
chr4 (112-229)||(37523179-37523297)
chr4 (120-229)||(46041991-46042101)
chr4 (149-229)||(14803002-14803084)
chr4 (120-229)||(27539207-27539317)
chr4 (112-229)||(43137369-43137487)
chr4 (111-229)||(52589362-52589481)
chr4 (116-229)||(31908733-31908846)
chr4 (115-229)||(9858540-9858654)
chr4 (115-217)||(36091361-36091463)
chr4 (116-214)||(24979944-24980042)
chr4 (114-205)||(23058765-23058857)
chr4 (110-158)||(31681548-31681596)
chr4 (114-205)||(42177342-42177434)
chr4 (114-158)||(53695386-53695430)
chr4 (114-214)||(32570674-32570774)
chr4 (114-229)||(36631036-36631151)
chr4 (112-205)||(30348161-30348255)
chr4 (117-214)||(51282241-51282338)
chr4 (115-214)||(5970700-5970800)
chr4 (111-214)||(27761397-27761501)
chr4 (114-158)||(46215772-46215816)
chr4 (114-229)||(46663617-46663732)
chr4 (118-214)||(25607694-25607790)
chr4 (114-212)||(45692622-45692721)
chr4 (112-229)||(30060528-30060645)
chr4 (116-205)||(50607999-50608089)
chr4 (113-161)||(27950257-27950306)
chr4 (114-214)||(38008459-38008560)
chr4 (117-158)||(56361318-56361359)
chr4 (117-164)||(408419-408466)
chr4 (114-157)||(29582329-29582372)
chr4 (143-205)||(50383358-50383421)
chr4 (169-215)||(32288959-32289005)
chr4 (114-158)||(19527085-19527130)
chr4 (169-214)||(50776077-50776122)
chr4 (114-158)||(1857166-1857210)
chr4 (111-158)||(4491217-4491265)
chr4 (169-229)||(9356437-9356497)
chr4 (120-156)||(46548726-46548762)
chr4 (114-158)||(47302758-47302802)
chr4 (169-229)||(48647075-48647135)
chr4 (112-164)||(50189369-50189421)
chr4 (120-156)||(54851385-54851421)
chr4 (120-156)||(56272942-56272978)
[»] chr2 (45 HSPs)
chr2 (112-229)||(34665861-34665978)
chr2 (112-229)||(5389200-5389317)
chr2 (115-229)||(1353797-1353911)
chr2 (116-229)||(11227918-11228031)
chr2 (113-229)||(4673600-4673718)
chr2 (113-229)||(37083500-37083618)
chr2 (120-229)||(11813198-11813309)
chr2 (115-229)||(38963068-38963184)
chr2 (110-229)||(14532820-14532940)
chr2 (119-229)||(15771314-15771425)
chr2 (111-229)||(33423031-33423150)
chr2 (114-229)||(59208-59325)
chr2 (114-229)||(3383191-3383308)
chr2 (118-229)||(42427572-42427684)
chr2 (116-229)||(3810452-3810566)
chr2 (114-226)||(6884454-6884568)
chr2 (115-158)||(37909720-37909763)
chr2 (113-214)||(1580246-1580348)
chr2 (113-214)||(25331454-25331556)
chr2 (113-229)||(6438171-6438287)
chr2 (114-212)||(30981193-30981292)
chr2 (110-157)||(32499508-32499555)
chr2 (114-214)||(38073106-38073206)
chr2 (116-214)||(45157819-45157918)
chr2 (114-191)||(45690499-45690578)
chr2 (116-158)||(33413068-33413110)
chr2 (113-158)||(6513261-6513306)
chr2 (114-214)||(9122156-9122257)
chr2 (117-158)||(11598477-11598518)
chr2 (110-158)||(9589476-9589524)
chr2 (113-153)||(34438186-34438226)
chr2 (114-158)||(43690022-43690066)
chr2 (113-205)||(3261220-3261313)
chr2 (113-164)||(38617727-38617778)
chr2 (113-158)||(8333890-8333936)
chr2 (117-214)||(17451285-17451383)
chr2 (113-214)||(32602302-32602404)
chr2 (113-214)||(35895310-35895412)
chr2 (113-158)||(41555430-41555476)
chr2 (113-158)||(7673294-7673339)
chr2 (117-158)||(20212156-20212197)
chr2 (169-214)||(27401035-27401080)
chr2 (120-156)||(22595100-22595136)
chr2 (120-156)||(29943919-29943955)
chr2 (169-229)||(39620484-39620544)
[»] chr7 (42 HSPs)
chr7 (113-229)||(41913095-41913211)
chr7 (114-229)||(42711220-42711335)
chr7 (110-229)||(40942166-40942286)
chr7 (113-229)||(28327356-28327474)
chr7 (113-229)||(21699291-21699408)
chr7 (111-229)||(30863083-30863202)
chr7 (117-229)||(41381772-41381886)
chr7 (111-229)||(38129382-38129501)
chr7 (137-229)||(3910220-3910314)
chr7 (114-203)||(27956601-27956691)
chr7 (118-229)||(30623724-30623836)
chr7 (117-224)||(1690996-1691104)
chr7 (113-229)||(30936093-30936209)
chr7 (116-186)||(45461660-45461731)
chr7 (114-229)||(45857475-45857590)
chr7 (113-158)||(18990450-18990495)
chr7 (114-217)||(44963823-44963926)
chr7 (112-159)||(34118831-34118878)
chr7 (112-212)||(26605054-26605155)
chr7 (114-217)||(8770370-8770473)
chr7 (115-205)||(35291327-35291418)
chr7 (120-158)||(20438822-20438860)
chr7 (112-158)||(43750437-43750483)
chr7 (113-193)||(15954587-15954668)
chr7 (110-205)||(32529176-32529272)
chr7 (110-229)||(43631051-43631170)
chr7 (116-212)||(17306603-17306700)
chr7 (114-214)||(3214826-3214932)
chr7 (113-158)||(30317551-30317596)
chr7 (113-205)||(35358017-35358110)
chr7 (113-229)||(41046837-41046954)
chr7 (111-158)||(21919685-21919733)
chr7 (114-212)||(7574551-7574650)
chr7 (115-205)||(23406653-23406744)
chr7 (110-159)||(27567156-27567206)
chr7 (114-158)||(23182390-23182435)
chr7 (169-214)||(37504615-37504660)
chr7 (114-158)||(28264750-28264794)
chr7 (112-195)||(30891581-30891665)
chr7 (111-158)||(31743663-31743711)
chr7 (111-159)||(43069469-43069517)
chr7 (120-156)||(45704507-45704543)
[»] chr6 (29 HSPs)
chr6 (113-229)||(2259195-2259311)
chr6 (113-229)||(17545894-17546010)
chr6 (113-229)||(6848799-6848921)
chr6 (112-229)||(4110845-4110963)
chr6 (118-229)||(13390678-13390790)
chr6 (112-229)||(24213202-24213320)
chr6 (113-229)||(32833773-32833890)
chr6 (114-226)||(8401414-8401528)
chr6 (115-229)||(24487286-24487402)
chr6 (112-229)||(1096507-1096624)
chr6 (113-229)||(26358551-26358668)
chr6 (113-212)||(33574660-33574760)
chr6 (113-212)||(33574838-33574938)
chr6 (115-158)||(15383204-15383247)
chr6 (113-229)||(18772150-18772267)
chr6 (114-157)||(34195879-34195922)
chr6 (113-206)||(8549562-8549656)
chr6 (113-229)||(29023618-29023734)
chr6 (169-229)||(2565017-2565077)
chr6 (113-212)||(4509737-4509836)
chr6 (115-206)||(11763174-11763266)
chr6 (114-229)||(31644410-31644525)
chr6 (111-205)||(9687090-9687185)
chr6 (114-164)||(19474027-19474078)
chr6 (111-158)||(23416859-23416906)
chr6 (112-158)||(6264941-6264987)
chr6 (113-158)||(10965985-10966031)
chr6 (113-158)||(8376019-8376064)
chr6 (116-214)||(16893204-16893302)
[»] chr1 (68 HSPs)
chr1 (114-229)||(37499033-37499148)
chr1 (123-229)||(28494061-28494167)
chr1 (113-229)||(23056990-23057108)
chr1 (113-229)||(23061291-23061409)
chr1 (113-229)||(6519986-6520103)
chr1 (113-229)||(5956525-5956643)
chr1 (113-229)||(35305441-35305559)
chr1 (113-229)||(18642159-18642276)
chr1 (114-229)||(51369607-51369724)
chr1 (111-229)||(39971266-39971385)
chr1 (133-229)||(52303303-52303400)
chr1 (110-229)||(51985225-51985345)
chr1 (112-229)||(921840-921958)
chr1 (115-229)||(8461528-8461643)
chr1 (118-229)||(45423905-45424017)
chr1 (113-229)||(23459548-23459665)
chr1 (113-229)||(39190562-39190679)
chr1 (110-229)||(46770727-46770847)
chr1 (118-229)||(45673607-45673719)
chr1 (118-229)||(51520104-51520216)
chr1 (137-229)||(50905869-50905962)
chr1 (120-229)||(38262140-38262249)
chr1 (115-229)||(26102474-26102589)
chr1 (111-229)||(50239274-50239392)
chr1 (131-229)||(43306823-43306921)
chr1 (116-228)||(34038163-34038276)
chr1 (111-226)||(51184333-51184448)
chr1 (112-214)||(12105158-12105261)
chr1 (115-158)||(26010943-26010986)
chr1 (115-158)||(51977859-51977902)
chr1 (112-229)||(24511870-24511987)
chr1 (113-205)||(52345598-52345691)
chr1 (114-217)||(7122258-7122361)
chr1 (114-229)||(25702435-25702551)
chr1 (169-228)||(16482867-16482926)
chr1 (117-215)||(42275338-42275437)
chr1 (116-217)||(2247348-2247449)
chr1 (113-229)||(38261094-38261210)
chr1 (114-214)||(46641822-46641923)
chr1 (112-156)||(2621043-2621087)
chr1 (114-229)||(12178890-12179005)
chr1 (114-158)||(33910052-33910096)
chr1 (112-214)||(24230567-24230670)
chr1 (114-214)||(14152687-14152789)
chr1 (116-229)||(30547901-30548014)
chr1 (113-229)||(9587934-9588051)
chr1 (157-229)||(29106408-29106480)
chr1 (113-205)||(48976874-48976967)
chr1 (114-205)||(6526428-6526520)
chr1 (114-158)||(35910525-35910569)
chr1 (111-158)||(40054949-40054997)
chr1 (114-157)||(632648-632691)
chr1 (116-206)||(24381633-24381724)
chr1 (114-212)||(30320890-30320989)
chr1 (127-158)||(42316848-42316879)
chr1 (116-214)||(52180538-52180637)
chr1 (115-149)||(33098706-33098740)
chr1 (169-206)||(477498-477535)
chr1 (169-214)||(6329304-6329349)
chr1 (114-158)||(43916346-43916391)
chr1 (113-205)||(46235146-46235239)
chr1 (169-214)||(46362079-46362124)
chr1 (114-214)||(51610536-51610636)
chr1 (169-214)||(52441133-52441178)
chr1 (169-205)||(7227626-7227662)
chr1 (169-205)||(17553872-17553908)
chr1 (169-229)||(21073055-21073115)
chr1 (111-158)||(51004787-51004835)
[»] chr3 (64 HSPs)
chr3 (114-229)||(11140536-11140651)
chr3 (113-229)||(44365899-44366016)
chr3 (115-229)||(42067868-42067984)
chr3 (115-229)||(44670260-44670374)
chr3 (114-229)||(29786533-29786650)
chr3 (11-113)||(30214926-30215028)
chr3 (113-229)||(42363927-42364044)
chr3 (113-229)||(46959842-46959959)
chr3 (118-229)||(47948396-47948508)
chr3 (120-229)||(35171197-35171307)
chr3 (114-229)||(38785082-38785198)
chr3 (113-229)||(876221-876338)
chr3 (118-229)||(40650361-40650473)
chr3 (113-229)||(45636378-45636496)
chr3 (118-229)||(42848194-42848306)
chr3 (137-229)||(31309169-31309262)
chr3 (114-191)||(29347311-29347389)
chr3 (114-188)||(39629948-39630023)
chr3 (118-223)||(378607-378712)
chr3 (116-229)||(52082045-52082158)
chr3 (111-214)||(1129126-1129230)
chr3 (111-205)||(37520699-37520794)
chr3 (113-212)||(40478065-40478165)
chr3 (111-158)||(4663143-4663190)
chr3 (114-165)||(37492251-37492302)
chr3 (175-229)||(4660045-4660099)
chr3 (113-214)||(9252159-9252260)
chr3 (112-229)||(42478975-42479093)
chr3 (114-214)||(42621848-42621949)
chr3 (114-158)||(19547851-19547895)
chr3 (113-164)||(29806365-29806416)
chr3 (116-214)||(47746134-47746233)
chr3 (113-158)||(788472-788517)
chr3 (113-158)||(27647842-27647887)
chr3 (114-214)||(44379414-44379515)
chr3 (114-206)||(44653484-44653577)
chr3 (114-214)||(51344678-51344778)
chr3 (114-158)||(21288813-21288857)
chr3 (169-229)||(39678397-39678457)
chr3 (13-78)||(30227556-30227622)
chr3 (113-214)||(36220711-36220813)
chr3 (113-158)||(8966293-8966338)
chr3 (113-150)||(25592011-25592048)
chr3 (113-205)||(32636941-32637034)
chr3 (115-159)||(53516583-53516627)
chr3 (114-192)||(4817076-4817155)
chr3 (116-214)||(41982290-41982389)
chr3 (113-159)||(48795438-48795485)
chr3 (117-214)||(7862750-7862848)
chr3 (141-214)||(14653809-14653883)
chr3 (113-214)||(26456953-26457054)
chr3 (113-212)||(40021387-40021487)
chr3 (113-158)||(3082177-3082222)
chr3 (114-158)||(29698322-29698367)
chr3 (113-158)||(35137802-35137847)
chr3 (117-205)||(37127807-37127895)
chr3 (169-214)||(41282586-41282631)
chr3 (113-196)||(1021297-1021381)
chr3 (122-158)||(7672162-7672198)
chr3 (110-158)||(29628979-29629027)
chr3 (189-229)||(37492207-37492247)
chr3 (116-196)||(46507363-46507443)
chr3 (120-156)||(52178959-52178995)
chr3 (114-158)||(53289230-53289274)
[»] chr5 (51 HSPs)
chr5 (114-229)||(13410831-13410948)
chr5 (114-229)||(42917408-42917524)
chr5 (114-228)||(32467334-32467449)
chr5 (114-229)||(34302938-34303054)
chr5 (112-229)||(3056686-3056804)
chr5 (110-229)||(1661688-1661808)
chr5 (110-229)||(36338841-36338961)
chr5 (117-229)||(6561116-6561229)
chr5 (113-229)||(24098160-24098277)
chr5 (113-229)||(43237354-43237471)
chr5 (118-229)||(9535157-9535269)
chr5 (115-229)||(21605939-21606055)
chr5 (111-229)||(2141532-2141651)
chr5 (120-229)||(18228466-18228576)
chr5 (112-229)||(6532870-6532988)
chr5 (113-229)||(2414214-2414331)
chr5 (112-229)||(13091204-13091321)
chr5 (145-229)||(6318317-6318402)
chr5 (149-229)||(6113808-6113890)
chr5 (113-229)||(14967522-14967638)
chr5 (114-225)||(22780807-22780919)
chr5 (149-229)||(2029643-2029724)
chr5 (113-205)||(36427904-36427997)
chr5 (111-214)||(6260323-6260427)
chr5 (118-217)||(9589511-9589610)
chr5 (115-158)||(3425090-3425133)
chr5 (115-229)||(29744193-29744307)
chr5 (116-205)||(479676-479766)
chr5 (120-158)||(2318431-2318469)
chr5 (115-192)||(39816506-39816584)
chr5 (113-229)||(12362356-12362472)
chr5 (113-158)||(28332484-28332529)
chr5 (114-205)||(13127295-13127387)
chr5 (115-229)||(40563116-40563231)
chr5 (114-159)||(4039469-4039515)
chr5 (112-205)||(33210684-33210778)
chr5 (113-205)||(29960181-29960274)
chr5 (114-158)||(13795273-13795316)
chr5 (113-191)||(29996823-29996903)
chr5 (125-212)||(30753458-30753546)
chr5 (110-192)||(13119126-13119209)
chr5 (112-229)||(36156132-36156249)
chr5 (113-158)||(39939032-39939078)
chr5 (115-164)||(702306-702355)
chr5 (110-158)||(5204613-5204662)
chr5 (114-158)||(5512682-5512727)
chr5 (120-157)||(21051327-21051364)
chr5 (170-214)||(12334613-12334657)
chr5 (114-158)||(17069347-17069391)
chr5 (114-157)||(31588597-31588641)
chr5 (111-158)||(40756538-40756586)
[»] scaffold0283 (1 HSPs)
scaffold0283 (111-229)||(6529-6647)
[»] scaffold0005 (1 HSPs)
scaffold0005 (149-229)||(36643-36725)
[»] scaffold0625 (1 HSPs)
scaffold0625 (113-158)||(6265-6310)
[»] scaffold0667 (1 HSPs)
scaffold0667 (114-214)||(138-239)
[»] scaffold0113 (1 HSPs)
scaffold0113 (113-229)||(29535-29652)
[»] scaffold0604 (1 HSPs)
scaffold0604 (115-158)||(2382-2425)
[»] scaffold0923 (1 HSPs)
scaffold0923 (114-196)||(8-91)
[»] scaffold0008 (1 HSPs)
scaffold0008 (114-228)||(45365-45479)


Alignment Details
Target: chr8 (Bit Score: 113; Significance: 2e-57; HSPs: 48)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 113 - 229
Target Start/End: Complemental strand, 34332518 - 34332402
Alignment:
Q  113 agggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgcttacatttttataaattaactatcattttttatgaaagaaataggtattt 212  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  34332518 agggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgcttacatttttataaattaactatcattttttatgaaagaaataggtgttt 34332419  T
Q  213 gttgacatatatatttt 229  Q
    |||||||||||||||||    
T  34332418 gttgacatatatatttt 34332402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 111 - 229
Target Start/End: Complemental strand, 44935307 - 44935189
Alignment:
Q  111 atagggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgcttacatttttataaattaactatcattttttatgaaagaaataggtat 210  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |    
T  44935307 atagggaacttctacggtacacccgcaatttaaggtgtaccggtactctcggttacatttttataaattaactatcattttttatgaaagaaataggtgt 44935208  T
Q  211 ttgttgacatatatatttt 229  Q
    |||||||||||||||||||    
T  44935207 ttgttgacatatatatttt 44935189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 113 - 229
Target Start/End: Complemental strand, 28090597 - 28090481
Alignment:
Q  113 agggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgcttacatttttataaattaactatcattttttatgaaagaaataggtattt 212  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||    
T  28090597 agggaacttctacggtacacccgcaatttaaggtgtaccggtactctcgcttacatttttataaattaactatcattttttatgaaagaaatagatgttt 28090498  T
Q  213 gttgacatatatatttt 229  Q
    |||||||||||||||||    
T  28090497 gttgacatatatatttt 28090481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 113 - 229
Target Start/End: Complemental strand, 29773851 - 29773735
Alignment:
Q  113 agggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgcttacatttttataaattaactatcattttttatgaaagaaataggtattt 212  Q
    |||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  29773851 agggaacttctacggtacacccgcaatttaaggtgtaccggtactttcgcttacatttttataaattaactatcattttttatgaaagaaataggtgttt 29773752  T
Q  213 gttgacatatatatttt 229  Q
    |||||||||||||||||    
T  29773751 gttgacatatatatttt 29773735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 113 - 229
Target Start/End: Complemental strand, 29460042 - 29459924
Alignment:
Q  113 agggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgcttac-atttttataaattaactatcattttttatgaaag-aaataggtat 210  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||| |    
T  29460042 agggaacttctacggtacacctgcaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaaagaaaataggtgt 29459943  T
Q  211 ttgttgacatatatatttt 229  Q
    |||||||||||||||||||    
T  29459942 ttgttgacatatatatttt 29459924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 115 - 229
Target Start/End: Complemental strand, 23286970 - 23286855
Alignment:
Q  115 ggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgcttacatttttataaattaactatcatt-ttttatgaaagaaataggtatttg 213  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| || |||     
T  23286970 ggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgcttacatttttataaattaactatcatttttttatgaaagaaataagtgttta 23286871  T
Q  214 ttgacatatatatttt 229  Q
    |||| |||||||||||    
T  23286870 ttgaaatatatatttt 23286855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 113 - 216
Target Start/End: Original strand, 39170997 - 39171103
Alignment:
Q  113 agggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgcttacatttttataaatta---actatcattttttatgaaagaaataggta 209  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||     
T  39170997 agggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgcttacatttttataaattaactactatcattttttatgaaagaaataggtg 39171096  T
Q  210 tttgttg 216  Q
    |||||||    
T  39171097 tttgttg 39171103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 112 - 229
Target Start/End: Complemental strand, 37511497 - 37511378
Alignment:
Q  112 tagggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgcttac-atttttataaattaactatcattttttatgaaag-aaataggta 209  Q
    |||||||||||||||||||| ||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||| |||| |||     
T  37511497 tagggaacttctacggtacatccgtaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcattttttattaaagaaaattggtg 37511398  T
Q  210 tttgttgacatatatatttt 229  Q
    ||||||||||||||||||||    
T  37511397 tttgttgacatatatatttt 37511378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 112 - 229
Target Start/End: Original strand, 15725888 - 15726006
Alignment:
Q  112 tagggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgcttaca-tttttataaattaactatcattttttatgaaagaaataggtat 210  Q
    |||||||||||||||||||||| |||||||| ||||||||| |||||||||||||| |||||||||||||||||| ||||||||||||  |||||||| |    
T  15725888 tagggaacttctacggtacacctgcaaattacggtgtaccgatactctcgcttacaatttttataaattaactataattttttatgaagaaaataggtgt 15725987  T
Q  211 ttgttgacatatatatttt 229  Q
    |||||||||||||||||||    
T  15725988 ttgttgacatatatatttt 15726006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 135 - 229
Target Start/End: Original strand, 39171103 - 39171197
Alignment:
Q  135 gcaaattaaggtgtaccggtactctcgcttacatttttataaattaactatcattttttatgaaagaaataggtatttgttgacatatatatttt 229  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||    
T  39171103 gcaaattaaggtgtaccagtactctcgcttacatttttataaattaactatcattttttataaaagaaataggtgtttgttgacatatatatttt 39171197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 112 - 229
Target Start/End: Complemental strand, 946379 - 946259
Alignment:
Q  112 tagggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgcttac-atttttataaattaactatca--ttttttatgaaagaaataggt 208  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| |||||||||||||||||||||  |||||||||||  ||||| ||    
T  946379 tagggaacttctacggtacacccgcaaattacggtgtaccggtactctcacttacaatttttataaattaactatcattttttttatgaagaaaataagt 946280  T
Q  209 atttgttgacatatatatttt 229  Q
     ||||||||||||||||||||    
T  946279 gtttgttgacatatatatttt 946259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 113 - 229
Target Start/End: Original strand, 29229175 - 29229293
Alignment:
Q  113 agggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgcttac-atttttataaattaactatca-ttttttatgaaagaaataggtat 210  Q
    ||||| ||||||||||||||||| |||||| ||||||||||||||||| ||||| ||||||||||||||||||||| |||||||||||  |||||||| |    
T  29229175 agggatcttctacggtacacccgtaaattacggtgtaccggtactctcacttacaatttttataaattaactatcacttttttatgaagaaaataggtgt 29229274  T
Q  211 ttgttgacatatatatttt 229  Q
    |||||||||||||||||||    
T  29229275 ttgttgacatatatatttt 29229293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 120 - 229
Target Start/End: Original strand, 14498310 - 14498420
Alignment:
Q  120 ttctacggtacacccgcaaattaaggtgtaccggtactctcgcttaca-tttttataaattaactatcattttttatgaaagaaataggtatttgttgac 218  Q
    ||||| |||||||||| |||||| ||| ||||||||||||| |||||| |||||||||||||||||||||||||||||||  |||||||| |||||||||    
T  14498310 ttctatggtacacccgtaaattacggtctaccggtactctcacttacaatttttataaattaactatcattttttatgaagaaaataggtgtttgttgac 14498409  T
Q  219 atatatatttt 229  Q
    |||||||||||    
T  14498410 atatatatttt 14498420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 114 - 222
Target Start/End: Complemental strand, 23275030 - 23274920
Alignment:
Q  114 gggaacttctacggtacacccgcaaattaaggtgtaccgg-tactctcgcttaca-tttttataaattaactatcattttttatgaaagaaataggtatt 211  Q
    ||||||||||||| |||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||| ||||||||||||  |||||||| ||    
T  23275030 gggaacttctacgatacacccgcaaattaaggtgtaccgggtactctcgcttacaatttttataaattaactattattttttatgaagaaaataggtgtt 23274931  T
Q  212 tgttgacatat 222  Q
    | |||||||||    
T  23274930 ttttgacatat 23274920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 118 - 229
Target Start/End: Complemental strand, 38502592 - 38502481
Alignment:
Q  118 acttctacggtacacccgcaaattaaggtgtaccggtactctcgcttac-atttttataaattaactatcattttttatgaaagaaataggtatttgttg 216  Q
    ||||||| |||||||||| |||||| |||||| ||||| |||||||||| ||||||||||||||||||||| ||||||||||  |||||||| |||||||    
T  38502592 acttctatggtacacccgtaaattacggtgtatcggtattctcgcttacaatttttataaattaactatca-tttttatgaagaaaataggtgtttgttg 38502494  T
Q  217 acatatatatttt 229  Q
    |||||||||||||    
T  38502493 acatatatatttt 38502481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 114 - 229
Target Start/End: Complemental strand, 17642479 - 17642364
Alignment:
Q  114 gggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgctt-acatttttataaattaactatcattttttatgaaagaaataggtattt 212  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  ||| | |  |||||||||||||||||| ||||||||||| ||| || |||||    
T  17642479 gggaacttctacggtacacccgcaaattaaggtgtaccggtactcttacttcaaaaatttataaattaactatca-tttttatgaaataaaaagctattt 17642381  T
Q  213 gttgacatatatatttt 229  Q
    ||||| || ||||||||    
T  17642380 gttgatatttatatttt 17642364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 120 - 229
Target Start/End: Complemental strand, 10280960 - 10280850
Alignment:
Q  120 ttctacggtacacccgcaaattaaggtgtaccggtactctcgcttaca-tttttataaattaactatcattttttatgaaagaaataggtatttgttgac 218  Q
    ||||| ||||||||||  ||||| |||||| ||||||||||| ||| | |||||||||||||| ||||||||||||||||  |||||||| |||||||||    
T  10280960 ttctatggtacacccgtgaattacggtgtatcggtactctcgtttataatttttataaattaattatcattttttatgaagaaaataggtgtttgttgac 10280861  T
Q  219 atatatatttt 229  Q
    |||||||||||    
T  10280860 atatatatttt 10280850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 117 - 229
Target Start/End: Original strand, 12162943 - 12163057
Alignment:
Q  117 aacttctacggtacacccgcaaattaaggtgtaccggtactctcgcttac-atttttataaattaactatca-ttttttatgaaagaaataggtatttgt 214  Q
    ||||| ||||||| ||||||||||||  |||||||||||||||| ||||| ||||||||||||||||||||| ||||||||| |  |||||||| |||||    
T  12162943 aacttatacggtatacccgcaaattacagtgtaccggtactctcacttacaatttttataaattaactatcatttttttatgtagaaaataggtgtttgt 12163042  T
Q  215 tgacatatatatttt 229  Q
    ||||| |||||||||    
T  12163043 tgacagatatatttt 12163057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 117 - 229
Target Start/End: Original strand, 12407371 - 12407485
Alignment:
Q  117 aacttctacggtacacccgcaaattaaggtgtaccggtactctcgcttac-atttttataaattaactatca-ttttttatgaaagaaataggtatttgt 214  Q
    ||||| ||||||| ||||||||||||  |||||||||||||||| ||||| ||||||||||||||||||||| ||||||||| |  |||||||| |||||    
T  12407371 aacttatacggtatacccgcaaattacagtgtaccggtactctcacttacaatttttataaattaactatcatttttttatgtagaaaataggtgtttgt 12407470  T
Q  215 tgacatatatatttt 229  Q
    ||||| |||||||||    
T  12407471 tgacagatatatttt 12407485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 113 - 229
Target Start/End: Complemental strand, 37161921 - 37161798
Alignment:
Q  113 agggaacttctacggtacacccgcaaattaaggtgtaccggtac------tctcgcttaca-tttttataaattaactatcattttttatgaaagaaata 205  Q
    |||||||||||| |||||| ||| |||||| |||||||| ||||      ||||||||| | |||||||||||||||||| ||||||||||||  |||||    
T  37161921 agggaacttctatggtacatccgtaaattacggtgtaccagtaccagtactctcgcttataatttttataaattaactataattttttatgaagaaaata 37161822  T
Q  206 ggtatttgttgacatatatatttt 229  Q
    ||| ||||||||||||||||||||    
T  37161821 ggtgtttgttgacatatatatttt 37161798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 138 - 222
Target Start/End: Complemental strand, 23275173 - 23275087
Alignment:
Q  138 aattaaggtgtaccgg-tactctcgcttaca-tttttataaattaactatcattttttatgaaagaaataggtatttgttgacatat 222  Q
    |||||||||||||||| |||||||||||||| |||||||||||||||||| ||||||||||||  |||||||| ||| |||||||||    
T  23275173 aattaaggtgtaccgggtactctcgcttacaatttttataaattaactattattttttatgaagaaaataggtgttttttgacatat 23275087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 117 - 217
Target Start/End: Complemental strand, 2273412 - 2273312
Alignment:
Q  117 aacttctacggtacacccgcaaattaaggtgtaccggtactctcgctt-acatttttataaattaactatcattttttatgaaagaaataggtatttgtt 215  Q
    ||||||||||||||||| |||||||||||||||||||||||||  ||| | |  |||||||||||||| ||| ||||||||||| ||| || ||||||||    
T  2273412 aacttctacggtacacctgcaaattaaggtgtaccggtactcttacttcaaaaatttataaattaactgtca-tttttatgaaataaaaagctatttgtt 2273314  T
Q  216 ga 217  Q
    ||    
T  2273313 ga 2273312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 114 - 214
Target Start/End: Original strand, 29454143 - 29454244
Alignment:
Q  114 gggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgctt-acatttttataaattaactatcattttttatgaaagaaataggtattt 212  Q
    ||||||||||||||||||| | |||| ||||||||||||||||||  |||| | | |||||||||||||| ||||||||||||| || |||||  |||||    
T  29454143 gggaacttctacggtacactcacaaagtaaggtgtaccggtactcctgcttcataattttataaattaacgatcattttttatgtaataaataactattt 29454242  T
Q  213 gt 214  Q
    ||    
T  29454243 gt 29454244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 153 - 229
Target Start/End: Complemental strand, 36002726 - 36002649
Alignment:
Q  153 gtactctcgcttaca-tttttataaattaactatcattttttatgaaagaaataggtatttgttgacatatatatttt 229  Q
    ||||||||| ||||| |||||||||||||||||| ||||||||||||  |||||||| ||||||||||||| ||||||    
T  36002726 gtactctcgtttacaatttttataaattaactattattttttatgaagaaaataggtgtttgttgacatatctatttt 36002649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 113 - 205
Target Start/End: Original strand, 10706554 - 10706647
Alignment:
Q  113 agggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgctt-acatttttataaattaactatcattttttatgaaagaaata 205  Q
    |||||||||||||||||||| | |||| | |||||||| |||||||| |||| | | |||||||||||||| |||||||||| ||||| |||||    
T  10706554 agggaacttctacggtacactcacaaagtgaggtgtactggtactcttgcttcataattttataaattaacgatcattttttgtgaaataaata 10706647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 116 - 157
Target Start/End: Original strand, 43485053 - 43485094
Alignment:
Q  116 gaacttctacggtacacccgcaaattaaggtgtaccggtact 157  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  43485053 gaacttctacggtacacccgcaaattaaggtgtaccggtact 43485094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 114 - 205
Target Start/End: Original strand, 29265589 - 29265681
Alignment:
Q  114 gggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgctt-acatttttataaattaactatcattttttatgaaagaaata 205  Q
    |||||||||||| |||||| | |||| | ||||||||||||||||| | || | | |||||||||||||| |||||||||||||||| |||||    
T  29265589 gggaacttctactgtacactcacaaagtgaggtgtaccggtactcttgtttcataattttataaattaacgatcattttttatgaaataaata 29265681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 115 - 205
Target Start/End: Original strand, 38329452 - 38329543
Alignment:
Q  115 ggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgc-ttacatttttataaattaactatcattttttatgaaagaaata 205  Q
    |||||||||||||||||| | |||| | || | ||||||||||||||| ||| | |||||||||||||| ||||||||| ||| ||||||||    
T  38329452 ggaacttctacggtacactcacaaagtgagatataccggtactctcgctttataattttataaattaacgatcatttttcatgtaagaaata 38329543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 114 - 214
Target Start/End: Complemental strand, 2261420 - 2261319
Alignment:
Q  114 gggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgctt-acatttttataaattaactatcattttttatgaaagaaataggtattt 212  Q
    ||||||||||| ||||||| | |||| | ||||||||||||||||  |||| | | |||| ||||||||| ||||||||||||| || |||||| |||||    
T  2261420 gggaacttctatggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttgtaaattaacgatcattttttatgtaataaatagctattt 2261321  T
Q  213 gt 214  Q
    ||    
T  2261320 gt 2261319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 111 - 154
Target Start/End: Complemental strand, 37466092 - 37466049
Alignment:
Q  111 atagggaacttctacggtacacccgcaaattaaggtgtaccggt 154  Q
    ||||||||||||||||||||| ||||||||||||||||| ||||    
T  37466092 atagggaacttctacggtacaaccgcaaattaaggtgtaacggt 37466049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 112 - 158
Target Start/End: Original strand, 26439507 - 26439553
Alignment:
Q  112 tagggaacttctacggtacacccgcaaattaaggtgtaccggtactc 158  Q
    |||||||||||||||||||| || |||||||||||||| ||||||||    
T  26439507 tagggaacttctacggtacatccacaaattaaggtgtatcggtactc 26439553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 117 - 205
Target Start/End: Original strand, 39300086 - 39300175
Alignment:
Q  117 aacttctacggtacacccgcaaattaaggtgtaccggtactctcgctt-acatttttataaattaactatcattttttatgaaagaaata 205  Q
    ||||| |||||||||| | |||| | ||||||||||||||||| |||| | | |||||||||||||  |||||||||| ||||| |||||    
T  39300086 aacttttacggtacactcacaaaatgaggtgtaccggtactcttgcttcataattttataaattaatgatcattttttgtgaaataaata 39300175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 113 - 205
Target Start/End: Original strand, 44000560 - 44000653
Alignment:
Q  113 agggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgctt-acatttttataaattaactatcattttttatgaaagaaata 205  Q
    ||||| |||||||||||||| | |||| | ||||||| |||||||||  ||| | | |||||||||||||| || ||||||||||||| |||||    
T  44000560 agggatcttctacggtacactcacaaaatgaggtgtatcggtactctttcttcataattttataaattaacgattattttttatgaaataaata 44000653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 112 - 164
Target Start/End: Complemental strand, 31158962 - 31158910
Alignment:
Q  112 tagggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgctt 164  Q
    ||||||||||||||||||||| |||||||| ||||||| | ||||||| ||||    
T  31158962 tagggaacttctacggtacactcgcaaattgaggtgtatcagtactcttgctt 31158910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 110 - 158
Target Start/End: Complemental strand, 38210730 - 38210682
Alignment:
Q  110 aatagggaacttctacggtacacccgcaaattaaggtgtaccggtactc 158  Q
    ||||||||||||||||||||||| || ||| |||||||||||| |||||    
T  38210730 aatagggaacttctacggtacactcgtaaaataaggtgtaccgatactc 38210682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 112 - 158
Target Start/End: Original strand, 9508855 - 9508902
Alignment:
Q  112 tagggaacttctacggtacacc-cgcaaattaaggtgtaccggtactc 158  Q
    |||||||||||||||||||||| | ||||||| |||||||||||||||    
T  9508855 tagggaacttctacggtacacctcacaaattagggtgtaccggtactc 9508902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 112 - 158
Target Start/End: Complemental strand, 2732191 - 2732145
Alignment:
Q  112 tagggaacttctacggtacacccgcaaattaaggtgtaccggtactc 158  Q
    ||||||| |||| ||||||| ||||||||||||||||||| ||||||    
T  2732191 tagggaatttcttcggtacatccgcaaattaaggtgtacctgtactc 2732145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 113 - 206
Target Start/End: Complemental strand, 34634260 - 34634167
Alignment:
Q  113 agggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgctt-acatttttataaattaactatcattttttatgaaagaaatag 206  Q
    ||||||||||||||||||||   |||| | || ||||||||||||||   || | | |||||||||||||| |||||||||||||||| ||||||    
T  34634260 agggaacttctacggtacacta-caaaatgagatgtaccggtactcttttttcataattttataaattaacgatcattttttatgaaataaatag 34634167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 114 - 164
Target Start/End: Original strand, 36672010 - 36672060
Alignment:
Q  114 gggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgctt 164  Q
    ||||||||||| ||||||| || ||||| ||||||||||||||||| ||||    
T  36672010 gggaacttctatggtacactcgtaaattgaggtgtaccggtactcttgctt 36672060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 229
Target Start/End: Original strand, 36886168 - 36886277
Alignment:
Q  120 ttctacggtacacccgcaaattaaggtgtaccggtactctcgctt-acatttttataaattaactatcattttttatgaaagaaataggtatttgttgac 218  Q
    ||||||| |||| ||||||| |||| ||||||||||||||   || | |  | |||||||||||||||||||||| ||||| ||| || ||||||||||     
T  36886168 ttctacgatacatccgcaaaataagatgtaccggtactcttaatttaaaaatatataaattaactatcatttttt-tgaaataaagagctatttgttgat 36886266  T
Q  219 atatatatttt 229  Q
    || ||||||||    
T  36886267 atttatatttt 36886277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 101 - 214
Target Start/End: Complemental strand, 41720668 - 41720554
Alignment:
Q  101 atcattaacaatagggaacttctacggtacacccgcaaattaaggtgtaccggtac-tctcgcttacatttttataaattaactatcattttttatgaaa 199  Q
    |||||||| || |||||||||||||||||||| | |||| | |||| ||||||||| |||   ||  | |||||||||| ||| ||||||||||||| |     
T  41720668 atcattaaaaaaagggaacttctacggtacactcacaaaatgaggtataccggtacttctactttttaattttataaatgaacgatcattttttatgcag 41720569  T
Q  200 gaaataggtatttgt 214  Q
     |||||| |||||||    
T  41720568 taaatagctatttgt 41720554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 112 - 205
Target Start/End: Original strand, 43841841 - 43841935
Alignment:
Q  112 tagggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgctt-acatttttataaattaactatcattttttatgaaagaaata 205  Q
    |||| |||||||||||||||| |  ||| |||||||||  ||||||||  ||| | | |||||||||||||| |||||||||||| ||| |||||    
T  43841841 taggaaacttctacggtacactcataaaataaggtgtattggtactctttcttcataattttataaattaacgatcattttttataaaataaata 43841935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 112 - 212
Target Start/End: Complemental strand, 1043468 - 1043367
Alignment:
Q  112 tagggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgctt-acatttttataaattaactatcattttttatgaaagaaataggtat 210  Q
    ||||||||||||||||||||| | |||| | ||||| || |||| ||  |||| | | ||||||| |||||| ||||||||||||| || |||||| |||    
T  1043468 tagggaacttctacggtacactcacaaagtgaggtgcactggtattcctgcttcataattttatatattaacgatcattttttatgtaataaatagttat 1043369  T
Q  211 tt 212  Q
    ||    
T  1043368 tt 1043367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 117 - 146
Target Start/End: Original strand, 13482912 - 13482941
Alignment:
Q  117 aacttctacggtacacccgcaaattaaggt 146  Q
    ||||||||||||||||||||||||||||||    
T  13482912 aacttctacggtacacccgcaaattaaggt 13482941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 169 - 214
Target Start/End: Original strand, 40776693 - 40776738
Alignment:
Q  169 ttttataaattaactatcattttttatgaaagaaataggtatttgt 214  Q
    |||||||||||||| ||||||||||||| || |||||| |||||||    
T  40776693 ttttataaattaacgatcattttttatggaataaatagctatttgt 40776738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 114 - 158
Target Start/End: Complemental strand, 529676 - 529632
Alignment:
Q  114 gggaacttctacggtacacccgcaaattaaggtgtaccggtactc 158  Q
    |||||||||||||||||||||| ||||||| ||||| || |||||    
T  529676 gggaacttctacggtacacccgtaaattaaagtgtatcgatactc 529632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 113 - 152
Target Start/End: Original strand, 6799782 - 6799822
Alignment:
Q  113 agggaacttctacggtacacccgc-aaattaaggtgtaccg 152  Q
    ||||||||||||||||||||| || ||||||||||||||||    
T  6799782 agggaacttctacggtacacctgcaaaattaaggtgtaccg 6799822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 115 - 205
Target Start/End: Original strand, 34165910 - 34166002
Alignment:
Q  115 ggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgctt-acatttttataaatt-aactatcattttttatgaaagaaata 205  Q
    ||||||||||| ||||||   |||| | ||||||| ||||||||| |||| | | ||||||||||| ||| |||||||||||||||| |||||    
T  34165910 ggaacttctaccgtacacttacaaagtgaggtgtatcggtactcttgcttcataattttataaatttaacgatcattttttatgaaataaata 34166002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 110; Significance: 1e-55; HSPs: 2)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 108 - 229
Target Start/End: Complemental strand, 48421 - 48300
Alignment:
Q  108 acaatagggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgcttacatttttataaattaactatcattttttatgaaagaaatagg 207  Q
    |||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48421 acaacagggaacttctacggtacacccgcaatttaaggtgtaccggtactctcgcttacatttttataaattaactatcattttttatgaaagaaatagg 48322  T
Q  208 tatttgttgacatatatatttt 229  Q
    | ||||||||||||||||||||    
T  48321 tgtttgttgacatatatatttt 48300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 108 - 161
Target Start/End: Complemental strand, 58176 - 58123
Alignment:
Q  108 acaatagggaacttctacggtacacccgcaaattaaggtgtaccggtactctcg 161  Q
    |||| |||||||||||||||||||||||||| ||||||||||||||||||||||    
T  58176 acaacagggaacttctacggtacacccgcaatttaaggtgtaccggtactctcg 58123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 110; Significance: 1e-55; HSPs: 61)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 112 - 229
Target Start/End: Complemental strand, 55722885 - 55722768
Alignment:
Q  112 tagggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgcttacatttttataaattaactatcattttttatgaaagaaataggtatt 211  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  55722885 tagggaacttttacggtacacccgcaaattaaggtgtaccggtactctcgcttacatttttataaattaactatcattttttatgaaagaaataggtgtt 55722786  T
Q  212 tgttgacatatatatttt 229  Q
    ||||||||||||||||||    
T  55722785 tgttgacatatatatttt 55722768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 113 - 229
Target Start/End: Original strand, 48578906 - 48579022
Alignment:
Q  113 agggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgcttacatttttataaattaactatcattttttatgaaagaaataggtattt 212  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  48578906 agggaacttctacggtacacccgtaaattaaggtgtaccggtactctcgcttacatttttataaattaactatcattttttatgaaagaaataggtgttt 48579005  T
Q  213 gttgacatatatatttt 229  Q
    |||||||||||||||||    
T  48579006 gttgacatatatatttt 48579022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 115 - 229
Target Start/End: Original strand, 41759660 - 41759774
Alignment:
Q  115 ggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgcttacatttttataaattaactatcattttttatgaaagaaataggtatttgt 214  Q
    ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  41759660 ggaacttctacggtacacccgtaaattaaagtgtaccggtactctcgcttacatttttataaattaactatcattttttatgaaagaaataggtgtttgt 41759759  T
Q  215 tgacatatatatttt 229  Q
    |||||||||||||||    
T  41759760 tgacatatatatttt 41759774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 114 - 229
Target Start/End: Complemental strand, 28038091 - 28037975
Alignment:
Q  114 gggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgcttacatttttataaattaactatcatt-ttttatgaaagaaataggtattt 212  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||    
T  28038091 gggaacttctacggtacacccacaaattaaggtgtaccggtactctcgcttacatttttataaattaactatcatttttttatgaaagaaataggttttt 28037992  T
Q  213 gttgacatatatatttt 229  Q
    ||||| |||||||||||    
T  28037991 gttgaaatatatatttt 28037975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 114 - 229
Target Start/End: Complemental strand, 47302386 - 47302270
Alignment:
Q  114 gggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgcttaca-tttttataaattaactatcattttttatgaaagaaataggtattt 212  Q
    |||||||||||||||||||||| |||||| |||||||||||||||||||||| | |||||||||||||||||||||||||||||||  |||||||| |||    
T  47302386 gggaacttctacggtacacccgtaaattacggtgtaccggtactctcgcttataatttttataaattaactatcattttttatgaagaaaataggtgttt 47302287  T
Q  213 gttgacatatatatttt 229  Q
    |||||||||||||||||    
T  47302286 gttgacatatatatttt 47302270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 116 - 229
Target Start/End: Original strand, 53388848 - 53388962
Alignment:
Q  116 gaacttctacggtacacccgcaaattaaggtgtaccggtactctcgcttacatttttataaattaactatca-ttttttatgaaagaaataggtatttgt 214  Q
    ||||||||| |||||| | ||||||||||||||||||||||||||| |||||||||||||||||||| |||| ||||||||||||||||||||| |||||    
T  53388848 gaacttctatggtacatctgcaaattaaggtgtaccggtactctcgtttacatttttataaattaaccatcatttttttatgaaagaaataggtgtttgt 53388947  T
Q  215 tgacatatatatttt 229  Q
    |||||||||||||||    
T  53388948 tgacatatatatttt 53388962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 113 - 229
Target Start/End: Original strand, 11109595 - 11109714
Alignment:
Q  113 agggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgctt-acatttttataaattaactatca-ttttttatgaaag-aaataggta 209  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||| ||||||||||||| |||| | |     
T  11109595 agggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgcttaaaatttttataaattaactatcatttttttatgaaagaaaattgatg 11109694  T
Q  210 tttgttgacatatatatttt 229  Q
    ||||||||||||||||||||    
T  11109695 tttgttgacatatatatttt 11109714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 113 - 229
Target Start/End: Original strand, 51435811 - 51435929
Alignment:
Q  113 agggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgcttaca-tttttataaattaactatca-ttttttatgaaagaaataggtat 210  Q
    |||||||||||| |||||||||||||||||||||||||||| ||||||  ||||| ||||| |||||||||||||| ||||||||||||||||||||| |    
T  51435811 agggaacttctatggtacacccgcaaattaaggtgtaccggaactctcatttacattttttttaaattaactatcatttttttatgaaagaaataggtgt 51435910  T
Q  211 ttgttgacatatatatttt 229  Q
    |||||||||||||||||||    
T  51435911 ttgttgacatatatatttt 51435929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 113 - 229
Target Start/End: Complemental strand, 3716732 - 3716615
Alignment:
Q  113 agggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgcttaca-tttttataaattaactatcattttttatgaaagaaataggtatt 211  Q
    ||||||||||||||||||||  | |||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||||||||  |||||||| ||    
T  3716732 agggaacttctacggtacacttggaaattacggtgtaccggtactctcgcttacaatttttataaattaactataattttttatgaagaaaataggtgtt 3716633  T
Q  212 tgttgacatatatatttt 229  Q
    ||||||||||||||||||    
T  3716632 tgttgacatatatatttt 3716615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 118 - 229
Target Start/End: Complemental strand, 30539962 - 30539850
Alignment:
Q  118 acttctacggtacacccgcaaattaaggtgtaccggtactctcgcttaca-tttttataaattaactatcattttttatgaaagaaataggtatttgttg 216  Q
    ||||||| |||||||||| |||||| ||||||| |||||||||||||| | |||||||||||||||||||||||||||||||| |||||||| |||||||    
T  30539962 acttctatggtacacccgtaaattacggtgtactggtactctcgcttataatttttataaattaactatcattttttatgaaaaaaataggtgtttgttg 30539863  T
Q  217 acatatatatttt 229  Q
    |||||||||||||    
T  30539862 acatatatatttt 30539850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 118 - 229
Target Start/End: Original strand, 34280228 - 34280340
Alignment:
Q  118 acttctacggtacacccgcaaattaaggtgtaccggtactctcgcttaca-tttttataaattaactatcattttttatgaaagaaataggtatttgttg 216  Q
    ||||||| |||||||||| |||||  |||||||||||||||||||||||| |||||||||||||||||||||||||||||||  |||||||| |||||||    
T  34280228 acttctatggtacacccgtaaattgcggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaagaaaataggtgtttgttg 34280327  T
Q  217 acatatatatttt 229  Q
    |||||||||||||    
T  34280328 acatatatatttt 34280340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 112 - 229
Target Start/End: Complemental strand, 38836258 - 38836140
Alignment:
Q  112 tagggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgcttac-atttttataaattaactatcattttttatgaaagaaataggtat 210  Q
    |||||||||||||||||||||| |||||||| |||||| |||||||||||||||| | |||| |||||||| ||| ||||||||||||| |||||||| |    
T  38836258 tagggaacttctacggtacacctgcaaattacggtgtatcggtactctcgcttacaacttttgtaaattaattataattttttatgaaaaaaataggtgt 38836159  T
Q  211 ttgttgacatatatatttt 229  Q
    |||||||||||||||||||    
T  38836158 ttgttgacatatatatttt 38836140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 118 - 229
Target Start/End: Original strand, 33075983 - 33076096
Alignment:
Q  118 acttctacggtacacccgcaaattaaggtgtaccggtactctcgcttac-atttttataaattaactatca-ttttttatgaaagaaataggtatttgtt 215  Q
    ||||||| |||||||||| |||||| ||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||  |||||||| ||||||    
T  33075983 acttctatggtacacccgtaaattacggtgtaccggtactctcgcttacaatttttataaattaactatcatttttttatgaagaaaataggtgtttgtt 33076082  T
Q  216 gacatatatatttt 229  Q
    ||||||||||||||    
T  33076083 gacatatatatttt 33076096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 110 - 229
Target Start/End: Complemental strand, 52592203 - 52592083
Alignment:
Q  110 aatagggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgcttac-atttttataaattaactatcattttttatgaaagaaataggt 208  Q
    |||||||||||||||||||||| ||| |||||| ||||||||||||||||||| ||| ||||||||||| ||| ||||||||||||||||  ||||| ||    
T  52592203 aatagggaacttctacggtacatccgtaaattacggtgtaccggtactctcgcatacaatttttataaagtaattatcattttttatgaagaaaataagt 52592104  T
Q  209 atttgttgacatatatatttt 229  Q
     ||||||||||||||||||||    
T  52592103 gtttgttgacatatatatttt 52592083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 116 - 229
Target Start/End: Complemental strand, 37855526 - 37855411
Alignment:
Q  116 gaacttctacggtacacccgcaaattaaggtgtaccggtactctcgcttac-atttttataaattaactatcattttttatgaaag-aaataggtatttg 213  Q
    |||||||||||||||| | | |||||||||||||||||||| ||||||||| ||||||||||||||||| |||||||||||||||| ||||| || ||||    
T  37855526 gaacttctacggtacatctgtaaattaaggtgtaccggtaccctcgcttacaatttttataaattaactgtcattttttatgaaagaaaataagtgtttg 37855427  T
Q  214 ttgacatatatatttt 229  Q
    ||||||||||||||||    
T  37855426 ttgacatatatatttt 37855411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 110 - 226
Target Start/End: Complemental strand, 30343238 - 30343120
Alignment:
Q  110 aatagggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgcttac-atttttataaattaactatca-ttttttatgaaagaaatagg 207  Q
    ||||| ||||||||||||||||||||||||||| ||| ||||| ||||||| ||||| ||||||||||||||||||||| |||||||||||  |||||||    
T  30343238 aatagtgaacttctacggtacacccgcaaattacggtttaccgctactctcacttacaatttttataaattaactatcatttttttatgaagaaaatagg 30343139  T
Q  208 tatttgttgacatatatat 226  Q
    | |||||||||||||||||    
T  30343138 tgtttgttgacatatatat 30343120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 112 - 229
Target Start/End: Original strand, 37518963 - 37519081
Alignment:
Q  112 tagggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgcttaca-tttttataaattaactatcattttttatgaaagaaataggtat 210  Q
    |||||||||||||||||||||||| ||||||  || || | ||||||||||||||| |||||||||||||||||||||||||||||||  ||||| || |    
T  37518963 tagggaacttctacggtacacccgtaaattacagtatatcagtactctcgcttacaatttttataaattaactatcattttttatgaagaaaataagtgt 37519062  T
Q  211 ttgttgacatatatatttt 229  Q
    |||||||||||||||||||    
T  37519063 ttgttgacatatatatttt 37519081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 112 - 229
Target Start/End: Original strand, 37523179 - 37523297
Alignment:
Q  112 tagggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgcttaca-tttttataaattaactatcattttttatgaaagaaataggtat 210  Q
    |||||||||||||||||||||||| ||||||  || || | ||||||||||||||| |||||||||||||||||||||||||||||||  ||||| || |    
T  37523179 tagggaacttctacggtacacccgtaaattacagtatatcagtactctcgcttacaatttttataaattaactatcattttttatgaagaaaataagtgt 37523278  T
Q  211 ttgttgacatatatatttt 229  Q
    |||||||||||||||||||    
T  37523279 ttgttgacatatatatttt 37523297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 120 - 229
Target Start/End: Complemental strand, 46042101 - 46041991
Alignment:
Q  120 ttctacggtacacccgcaaattaaggtgtaccggtactctcgcttaca-tttttataaattaactatcattttttatgaaagaaataggtatttgttgac 218  Q
    ||||| ||||||||||  ||||| | |||||||||||||||| ||| | |||||||||||||||||||||||||||||||  |||||||| |||||||||    
T  46042101 ttctatggtacacccgtgaattacgatgtaccggtactctcgtttataatttttataaattaactatcattttttatgaagaaaataggtgtttgttgac 46042002  T
Q  219 atatatatttt 229  Q
    |||||||||||    
T  46042001 atatatatttt 46041991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 149 - 229
Target Start/End: Complemental strand, 14803084 - 14803002
Alignment:
Q  149 accggtactctcgcttaca-tttttataaattaactatcattttttatgaaag-aaataggtatttgttgacatatatatttt 229  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||    
T  14803084 accggtactctcgcttacaatttttataaattaactatcattttttatgaaagaaaattggtgtttgttgacatatatatttt 14803002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 120 - 229
Target Start/End: Complemental strand, 27539317 - 27539207
Alignment:
Q  120 ttctacggtacacccgcaaattaaggtgtaccggtactctcgcttaca-tttttataaattaactatcattttttatgaaagaaataggtatttgttgac 218  Q
    ||||| |||||| ||| |||||| |||||||||||||||| ||||| | |||||||||||||||||| ||||||||||||  |||||||| ||||||||     
T  27539317 ttctatggtacatccgtaaattatggtgtaccggtactcttgcttataatttttataaattaactataattttttatgaagaaaataggtgtttgttgat 27539218  T
Q  219 atatatatttt 229  Q
    |||||||||||    
T  27539217 atatatatttt 27539207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 112 - 229
Target Start/End: Original strand, 43137369 - 43137487
Alignment:
Q  112 tagggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgcttacattttta-taaattaactatcattttttatgaaagaaataggtat 210  Q
    ||||| ||||||| ||||||||||  ||||| |||||| |||||||||| |||||| ||||| |||||||||||||||||||| | ||  |||||||| |    
T  43137369 taggggacttctatggtacacccgtgaattacggtgtatcggtactctcacttacaattttaataaattaactatcattttttgtaaagaaaataggtgt 43137468  T
Q  211 ttgttgacatatatatttt 229  Q
    |||||||||||||||||||    
T  43137469 ttgttgacatatatatttt 43137487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 111 - 229
Target Start/End: Complemental strand, 52589481 - 52589362
Alignment:
Q  111 atagggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgcttaca-tttttataaattaactatcattttttatgaaagaaataggta 209  Q
    |||||| ||||||| ||||||| || |||||| ||||||||| |||||| | ||| | |||||||||||||||||| ||||||||||||  ||||||||     
T  52589481 ataggggacttctatggtacactcgtaaattacggtgtaccgatactcttgtttataatttttataaattaactataattttttatgaagaaaataggtg 52589382  T
Q  210 tttgttgacatatatatttt 229  Q
    ||| ||||||||||||||||    
T  52589381 tttattgacatatatatttt 52589362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 116 - 229
Target Start/End: Complemental strand, 31908846 - 31908733
Alignment:
Q  116 gaacttctacggtacacccgcaaattaaggtgtaccggtactctcgctt-acatttttataaattaactatcattttttatgaaagaaataggtatttgt 214  Q
    ||||||||||||||||||||||||||||||||||||||||||||  ||| | |  ||||||||||||||||||  |||||||||| ||| || |||||||    
T  31908846 gaacttctacggtacacccgcaaattaaggtgtaccggtactcttacttcaaaaatttataaattaactatca-attttatgaaataaaaagctatttgt 31908748  T
Q  215 tgacatatatatttt 229  Q
    ||| || ||||||||    
T  31908747 tgatatttatatttt 31908733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 115 - 229
Target Start/End: Complemental strand, 9858654 - 9858540
Alignment:
Q  115 ggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgctt-acatttttataaattaactatcattttttatgaaagaaataggtatttg 213  Q
    ||||||||||||||||||| |||||||||||||||||||||||||  ||| | |  |||||||||||||||| | ||||||||||| ||| || ||||||    
T  9858654 ggaacttctacggtacacctgcaaattaaggtgtaccggtactcttacttcaaaaatttataaattaactatta-tttttatgaaataaaaagctatttg 9858556  T
Q  214 ttgacatatatatttt 229  Q
    |||| || ||||||||    
T  9858555 ttgatatttatatttt 9858540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 115 - 217
Target Start/End: Complemental strand, 36091463 - 36091361
Alignment:
Q  115 ggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgctt-acatttttataaattaactatcattttttatgaaagaaataggtatttg 213  Q
    ||||||||||||||||||| | |||||||||||||||||||||||  ||| | |  |||||||||||||||||| ||||||||||| ||| || ||||||    
T  36091463 ggaacttctacggtacacctgtaaattaaggtgtaccggtactcttacttcaaaaatttataaattaactatca-tttttatgaaataaaaagctatttg 36091365  T
Q  214 ttga 217  Q
    ||||    
T  36091364 ttga 36091361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 116 - 214
Target Start/End: Original strand, 24979944 - 24980042
Alignment:
Q  116 gaacttctacggtacacccgcaaattaaggtgtaccggtactctcgcttacat-ttttataaattaactatcattttttatgaaagaaataggtatttgt 214  Q
    ||||||||||||||||| | |||| ||||||||||||||||| | |||| ||| |||||||||||||| || |||||||||| || |||||| |||||||    
T  24979944 gaacttctacggtacactcacaaaataaggtgtaccggtactattgctt-catattttataaattaacgataattttttatgtaataaatagctatttgt 24980042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 114 - 205
Target Start/End: Original strand, 23058765 - 23058857
Alignment:
Q  114 gggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgctt-acatttttataaattaactatcattttttatgaaagaaata 205  Q
    ||||||||||||||||||| | |||| | || ||||||||||||||||||| | | ||||| |||||||| ||||||||| ||| ||||||||    
T  23058765 gggaacttctacggtacactcacaaagtgagatgtaccggtactctcgcttcatacttttacaaattaacgatcatttttcatgtaagaaata 23058857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 110 - 158
Target Start/End: Complemental strand, 31681596 - 31681548
Alignment:
Q  110 aatagggaacttctacggtacacccgcaaattaaggtgtaccggtactc 158  Q
    |||||||||||||||||||||||||| ||||||||||||||| ||||||    
T  31681596 aatagggaacttctacggtacacccgtaaattaaggtgtaccagtactc 31681548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 114 - 205
Target Start/End: Original strand, 42177342 - 42177434
Alignment:
Q  114 gggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgctt-acatttttataaattaactatcattttttatgaaagaaata 205  Q
    ||||||||||||||||||| | |||| | ||||||| |||||||||  ||| | | |||||||||||||| |||||||||||||||| |||||    
T  42177342 gggaacttctacggtacactcacaaaatgaggtgtatcggtactctttcttcataattttataaattaacgatcattttttatgaaataaata 42177434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 114 - 158
Target Start/End: Original strand, 53695386 - 53695430
Alignment:
Q  114 gggaacttctacggtacacccgcaaattaaggtgtaccggtactc 158  Q
    |||||||||||||||||||| ||||||||||||||||||||||||    
T  53695386 gggaacttctacggtacacctgcaaattaaggtgtaccggtactc 53695430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 114 - 214
Target Start/End: Complemental strand, 32570774 - 32570674
Alignment:
Q  114 gggaacttctacggtacacc-cgcaaattaaggtgtaccggtactctcgctt-acatttttataaattaactatcattttttatgaaagaaataggtatt 211  Q
    |||||||||||||||||||| | |||||| |||||||||||||||||  ||| | |  ||||||||||||| ||||  |||||||||| |||||||||||    
T  32570774 gggaacttctacggtacacctcacaaattgaggtgtaccggtactcttacttcataaatttataaattaacgatca--ttttatgaaataaataggtatt 32570677  T
Q  212 tgt 214  Q
    |||    
T  32570676 tgt 32570674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 114 - 229
Target Start/End: Original strand, 36631036 - 36631151
Alignment:
Q  114 gggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgcttacatttttataaattaactatcattttttatgaaagaaataggtatttg 213  Q
    ||||||||||||||||||| | |||| | ||||||| ||||||| |   | | | |||||||||||||| |||||||||||||||| |||||  ||||||    
T  36631036 gggaacttctacggtacactcacaaaatgaggtgtaacggtactatttttcataattttataaattaacgatcattttttatgaaataaataactatttg 36631135  T
Q  214 ttgacatatatatttt 229  Q
    || | || ||||||||    
T  36631136 ttaatatttatatttt 36631151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 112 - 205
Target Start/End: Original strand, 30348161 - 30348255
Alignment:
Q  112 tagggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgctt-acatttttataaattaactatcattttttatgaaagaaata 205  Q
    ||||||||| ||||||||||  | |||| | |||||||||||||||||  ||| | | |||||||||||||| |||||||||||||||| |||||    
T  30348161 tagggaactactacggtacaatcacaaaatgaggtgtaccggtactctttcttcataattttataaattaacgatcattttttatgaaataaata 30348255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 117 - 214
Target Start/End: Complemental strand, 51282338 - 51282241
Alignment:
Q  117 aacttctacggtacacccgcaaattaaggtgtaccggtactctcgctt-acatttttataaattaactatcattttttatgaaagaaataggtatttgt 214  Q
    |||||||||||||||||| ||| |||| |||||||||||||||  ||| | |  |||||||||||||||||| ||||||||||| ||| || |||||||    
T  51282338 aacttctacggtacacccacaatttaaagtgtaccggtactcttacttcaaaaatttataaattaactatca-tttttatgaaataaaaagttatttgt 51282241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 115 - 214
Target Start/End: Original strand, 5970700 - 5970800
Alignment:
Q  115 ggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgctt-acatttttataaattaactatcattttttatgaaagaaataggtatttg 213  Q
    |||||||||||||||||| | || | | || |||||||||||||| |||| | | |||||||||||||  ||||||||||||| || |||||| ||||||    
T  5970700 ggaacttctacggtacactcacatagtgagatgtaccggtactcttgcttcataattttataaattaataatcattttttatgtaataaatagctatttg 5970799  T
Q  214 t 214  Q
    |    
T  5970800 t 5970800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 111 - 214
Target Start/End: Original strand, 27761397 - 27761501
Alignment:
Q  111 atagggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgctt-acatttttataaattaactatcattttttatgaaagaaataggta 209  Q
    |||||||| ||||||||||||| | |||| | ||||||| ||||||||| |||| | | |||||| ||||||| || |||||||||| || |||||| ||    
T  27761397 atagggaatttctacggtacactcacaaagtgaggtgtatcggtactcttgcttcataattttatgaattaacgataattttttatgtaataaatagcta 27761496  T
Q  210 tttgt 214  Q
    |||||    
T  27761497 tttgt 27761501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 114 - 158
Target Start/End: Original strand, 46215772 - 46215816
Alignment:
Q  114 gggaacttctacggtacacccgcaaattaaggtgtaccggtactc 158  Q
    ||||||||||||||||||| |||||||||| ||||||||||||||    
T  46215772 gggaacttctacggtacactcgcaaattaatgtgtaccggtactc 46215816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 114 - 229
Target Start/End: Complemental strand, 46663732 - 46663617
Alignment:
Q  114 gggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgctt-acatttttataaattaactatcattttttatgaaagaaataggtattt 212  Q
    ||||||||||||||||||| || ||||| ||||||||||||||||| |||| | |  | ||||||||||  ||||  |||||||||| |||||| |||||    
T  46663732 gggaacttctacggtacactcgtaaattgaggtgtaccggtactcttgcttcataaatctataaattaatgatca-attttatgaaataaatagttattt 46663634  T
Q  213 gttgacatatatatttt 229  Q
    || | ||| ||||||||    
T  46663633 gtcggcatttatatttt 46663617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 118 - 214
Target Start/End: Original strand, 25607694 - 25607790
Alignment:
Q  118 acttctacggtacacc-cgcaaattaaggtgtaccggtactctcgctt-acatttttataaattaactatcattttttatgaaagaaataggtatttgt 214  Q
    |||||||||||||||| | |||||| |||||||||||||||||| ||| | |  ||||||||||||| ||  | |||||||||| ||||||||||||||    
T  25607694 acttctacggtacacctcacaaattgaggtgtaccggtactctcacttcataaatttataaattaacgat--tattttatgaaataaataggtatttgt 25607790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 114 - 212
Target Start/End: Original strand, 45692622 - 45692721
Alignment:
Q  114 gggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgctt-acatttttataaattaactatcattttttatgaaagaaataggtattt 212  Q
    ||||||||||||||||||| || ||| |||||||||||| |||||| ||||   | |||||||||| ||| || |||||||||| || |||||| |||||    
T  45692622 gggaacttctacggtacactcgtaaaataaggtgtaccgatactcttgcttcttaattttataaatgaacgataattttttatgtaataaatagctattt 45692721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 112 - 229
Target Start/End: Original strand, 30060528 - 30060645
Alignment:
Q  112 tagggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgctt-acatttttataaattaactatcattttttatgaaagaaataggtat 210  Q
    ||||||||||||||||||||| || ||||| |||||||||| |||||| |||| | |  | |||||| |||| ||||  |||||||||| |||||| |||    
T  30060528 tagggaacttctacggtacactcgtaaattgaggtgtaccgatactcttgcttcataaatctataaactaacgatca-attttatgaaataaatagttat 30060626  T
Q  211 ttgttgacatatatatttt 229  Q
    |||| | ||| ||||||||    
T  30060627 ttgtcggcatttatatttt 30060645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 116 - 205
Target Start/End: Complemental strand, 50608089 - 50607999
Alignment:
Q  116 gaacttctacggtacacccgcaaattaaggtgtaccggtactctcgctt-acatttttataaattaactatcattttttatgaaagaaata 205  Q
    ||||||||||||||||| | |||| | |||||||||  ||||||  ||| | | |||||||||||||| |||||||||||||||| |||||    
T  50608089 gaacttctacggtacactcacaaaatgaggtgtaccaatactctttcttcataattttataaattaacaatcattttttatgaaataaata 50607999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 113 - 161
Target Start/End: Original strand, 27950257 - 27950306
Alignment:
Q  113 agggaacttctacggtacacc-cgcaaattaaggtgtaccggtactctcg 161  Q
    ||||||||||||||||||||| | |||||| |||||||||||||||||||    
T  27950257 agggaacttctacggtacacctcacaaattgaggtgtaccggtactctcg 27950306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 114 - 214
Target Start/End: Complemental strand, 38008560 - 38008459
Alignment:
Q  114 gggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgctt-acatttttataaattaactatcattttttatgaaagaaataggtattt 212  Q
    ||||||||||||||| ||| | |||| | ||||||| || ||||||  ||| | | |||||||||||||| |||||||||||||||| |||||  |||||    
T  38008560 gggaacttctacggtgcactcacaaaatgaggtgtatcgatactctttcttcataattttataaattaacgatcattttttatgaaataaataactattt 38008461  T
Q  213 gt 214  Q
    ||    
T  38008460 gt 38008459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 117 - 158
Target Start/End: Original strand, 56361318 - 56361359
Alignment:
Q  117 aacttctacggtacacccgcaaattaaggtgtaccggtactc 158  Q
    |||||||||||||||||||||||||||||||||  |||||||    
T  56361318 aacttctacggtacacccgcaaattaaggtgtattggtactc 56361359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 117 - 164
Target Start/End: Complemental strand, 408466 - 408419
Alignment:
Q  117 aacttctacggtacacccgcaaattaaggtgtaccggtactctcgctt 164  Q
    |||||||||||||||| || ||||| ||||||||||||||||| ||||    
T  408466 aacttctacggtacactcgtaaattgaggtgtaccggtactcttgctt 408419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 114 - 157
Target Start/End: Complemental strand, 29582372 - 29582329
Alignment:
Q  114 gggaacttctacggtacacccgcaaattaaggtgtaccggtact 157  Q
    ||||||||||||||||||| | |||||| |||||||||||||||    
T  29582372 gggaacttctacggtacactcacaaattgaggtgtaccggtact 29582329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 143 - 205
Target Start/End: Original strand, 50383358 - 50383421
Alignment:
Q  143 aggtgtaccggtactctcgctt-acatttttataaattaactatcattttttatgaaagaaata 205  Q
    ||||||| |||||||||||||| | | |||||||||||||| ||||||||| ||| ||||||||    
T  50383358 aggtgtatcggtactctcgcttcataattttataaattaacgatcatttttcatgtaagaaata 50383421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 215
Target Start/End: Original strand, 32288959 - 32289005
Alignment:
Q  169 ttttataaattaactatcattttttatgaaagaaataggtatttgtt 215  Q
    ||||||| |||||| |||||||||||||||| |||||| ||||||||    
T  32288959 ttttatatattaacgatcattttttatgaaataaatagctatttgtt 32289005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 114 - 158
Target Start/End: Complemental strand, 19527130 - 19527085
Alignment:
Q  114 gggaacttctacggtacacc-cgcaaattaaggtgtaccggtactc 158  Q
    |||||||||||||||||||| | |||||| ||||||||||||||||    
T  19527130 gggaacttctacggtacacctcacaaattgaggtgtaccggtactc 19527085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 169 - 214
Target Start/End: Complemental strand, 50776122 - 50776077
Alignment:
Q  169 ttttataaattaactatcattttttatgaaagaaataggtatttgt 214  Q
    |||||||||||||| |||||||||||||||| |||||  |||||||    
T  50776122 ttttataaattaacaatcattttttatgaaataaataattatttgt 50776077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 114 - 158
Target Start/End: Complemental strand, 1857210 - 1857166
Alignment:
Q  114 gggaacttctacggtacacccgcaaattaaggtgtaccggtactc 158  Q
    ||||||||||||||||||| | |||| | ||||||||||||||||    
T  1857210 gggaacttctacggtacactcacaaaatgaggtgtaccggtactc 1857166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 111 - 158
Target Start/End: Complemental strand, 4491265 - 4491217
Alignment:
Q  111 atagggaacttctacggtacacc-cgcaaattaaggtgtaccggtactc 158  Q
    ||||||||||||||||||||||| |  ||||| ||||||||||||||||    
T  4491265 atagggaacttctacggtacacctcataaattgaggtgtaccggtactc 4491217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 169 - 229
Target Start/End: Original strand, 9356437 - 9356497
Alignment:
Q  169 ttttataaattaactatcattttttatgaaagaaataggtatttgttgacatatatatttt 229  Q
    |||||||||||||  |||||||||||| ||| |||||| |||||||| | || ||||||||    
T  9356437 ttttataaattaaaaatcattttttataaaataaatagctatttgttaatatttatatttt 9356497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 156
Target Start/End: Complemental strand, 46548762 - 46548726
Alignment:
Q  120 ttctacggtacacccgcaaattaaggtgtaccggtac 156  Q
    |||||||||||||||  ||||||||||||||||||||    
T  46548762 ttctacggtacacccttaaattaaggtgtaccggtac 46548726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 114 - 158
Target Start/End: Complemental strand, 47302802 - 47302758
Alignment:
Q  114 gggaacttctacggtacacccgcaaattaaggtgtaccggtactc 158  Q
    |||||||||||||||||| ||| |||||||| | |||||||||||    
T  47302802 gggaacttctacggtacatccgtaaattaagttttaccggtactc 47302758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 169 - 229
Target Start/End: Original strand, 48647075 - 48647135
Alignment:
Q  169 ttttataaattaactatcattttttatgaaagaaataggtatttgttgacatatatatttt 229  Q
    |||||||||||||| |||||||||| ||||| |||||  |||||||  |||| ||||||||    
T  48647075 ttttataaattaacgatcattttttgtgaaataaataactatttgtcaacatttatatttt 48647135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 112 - 164
Target Start/End: Complemental strand, 50189421 - 50189369
Alignment:
Q  112 tagggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgctt 164  Q
    |||||||||||||| |||||| || ||||| ||||||||| ||||||| ||||    
T  50189421 tagggaacttctacagtacactcgtaaattgaggtgtaccagtactcttgctt 50189369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 156
Target Start/End: Complemental strand, 54851421 - 54851385
Alignment:
Q  120 ttctacggtacacccgcaaattaaggtgtaccggtac 156  Q
    |||||||||||||||  ||||||||||||||||||||    
T  54851421 ttctacggtacacccttaaattaaggtgtaccggtac 54851385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 156
Target Start/End: Complemental strand, 56272978 - 56272942
Alignment:
Q  120 ttctacggtacacccgcaaattaaggtgtaccggtac 156  Q
    |||||||||||||||  ||||||||||||||||||||    
T  56272978 ttctacggtacacccttaaattaaggtgtaccggtac 56272942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 110; Significance: 1e-55; HSPs: 45)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 112 - 229
Target Start/End: Complemental strand, 34665978 - 34665861
Alignment:
Q  112 tagggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgcttacatttttataaattaactatcattttttatgaaagaaataggtatt 211  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||    
T  34665978 tagggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgcttacatttttataaattaactattattttttatgaaagaaataggtgtt 34665879  T
Q  212 tgttgacatatatatttt 229  Q
    ||||||||||||||||||    
T  34665878 tgttgacatatatatttt 34665861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 112 - 229
Target Start/End: Original strand, 5389200 - 5389317
Alignment:
Q  112 tagggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgcttacatttttataaattaactatcattttttatgaaagaaataggtatt 211  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| || ||    
T  5389200 tagggaacttctacggtacacccgcaaattaaggtgtaccggcactctcgcttacatttttataaattaactatcattttttatgaaagaaatatgtgtt 5389299  T
Q  212 tgttgacatatatatttt 229  Q
    ||||||||||||||||||    
T  5389300 tgttgacatatatatttt 5389317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 115 - 229
Target Start/End: Complemental strand, 1353911 - 1353797
Alignment:
Q  115 ggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgcttacatttttataaattaactatcattttttatgaaagaaataggtatttgt 214  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||    
T  1353911 ggaacttctacggtacacccgcaaattaaggtgtaccagtactctcgcttacatttttataaattaactataattttttatgaaagaaataggtgtttgt 1353812  T
Q  215 tgacatatatatttt 229  Q
    |||||||||||||||    
T  1353811 tgacatatatatttt 1353797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 116 - 229
Target Start/End: Complemental strand, 11228031 - 11227918
Alignment:
Q  116 gaacttctacggtacacccgcaaattaaggtgtaccggtactctcgcttacatttttataaattaactatcattttttatgaaagaaataggtatttgtt 215  Q
    |||||||||||||||||| ||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  11228031 gaacttctacggtacacctgcaaattaaggtgtatcagtactctcgcttacatttttataaattaactatcattttttatgaaagaaataggtgtttgtt 11227932  T
Q  216 gacatatatatttt 229  Q
    ||||||||||||||    
T  11227931 gacatatatatttt 11227918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 113 - 229
Target Start/End: Original strand, 4673600 - 4673718
Alignment:
Q  113 agggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgcttac-atttttataaattaactatcattttttatgaaag-aaataggtat 210  Q
    |||||||||||| |||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||| |    
T  4673600 agggaacttctaaggtacacctgcaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaaagaaaataggtgt 4673699  T
Q  211 ttgttgacatatatatttt 229  Q
    |||||||||||||||||||    
T  4673700 ttgttgacatatatatttt 4673718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 113 - 229
Target Start/End: Complemental strand, 37083618 - 37083500
Alignment:
Q  113 agggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgcttac-atttttataaattaactatcattttttatgaaag-aaataggtat 210  Q
    ||||||||||||||||||| ||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||| |    
T  37083618 agggaacttctacggtacatccgcaaattaaggtgtatcggtactctcgcttacaatttttataaattaactatcattttttatgaaagaaaataggtgt 37083519  T
Q  211 ttgttgacatatatatttt 229  Q
    |||||||||||||||||||    
T  37083518 ttgttgacatatatatttt 37083500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 120 - 229
Target Start/End: Original strand, 11813198 - 11813309
Alignment:
Q  120 ttctacggtacacccgcaaattaaggtgtaccggtactctcgcttac-atttttataaattaactatcattttttatgaaag-aaataggtatttgttga 217  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||| ||||||||    
T  11813198 ttctacggtacacccacaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaaagaaaataggtgtttgttga 11813297  T
Q  218 catatatatttt 229  Q
    ||||||||||||    
T  11813298 catatatatttt 11813309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 115 - 229
Target Start/End: Original strand, 38963068 - 38963184
Alignment:
Q  115 ggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgcttacatttttataaattaactatca--ttttttatgaaagaaataggtattt 212  Q
    |||||||||||| |||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||  |||||||| |||||||||||| |||    
T  38963068 ggaacttctacgttacacctgcaaattaaggtgcaccggtactctcgcttacatttttataaattaactatcattttttttataaaagaaataggtgttt 38963167  T
Q  213 gttgacatatatatttt 229  Q
    |||||||||||||||||    
T  38963168 gttgacatatatatttt 38963184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 110 - 229
Target Start/End: Original strand, 14532820 - 14532940
Alignment:
Q  110 aatagggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgcttac-atttttataaattaactatcattttttatgaaagaaataggt 208  Q
    ||||||||||||||||||||||||||||||||| |||||| || ||||||||||||| |||||||||| |||||||||||||||||||||  ||||||||    
T  14532820 aatagggaacttctacggtacacccgcaaattacggtgtatcgatactctcgcttacaatttttataatttaactatcattttttatgaagaaaataggt 14532919  T
Q  209 atttgttgacatatatatttt 229  Q
     |||||| |||||||||||||    
T  14532920 gtttgttaacatatatatttt 14532940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 119 - 229
Target Start/End: Original strand, 15771314 - 15771425
Alignment:
Q  119 cttctacggtacacccgcaaattaaggtgtaccggtactctcgctta-catttttataaattaactatcattttttatgaaagaaataggtatttgttga 217  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||| ||  ||||| || ||||||||    
T  15771314 cttctacggtacacccgtaaattaaggtgtaccggtactctcgcttataatttttataaattaactatcattttttataaagaaaataagtgtttgttga 15771413  T
Q  218 catatatatttt 229  Q
    ||||||||||||    
T  15771414 catatatatttt 15771425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 111 - 229
Target Start/End: Original strand, 33423031 - 33423150
Alignment:
Q  111 atagggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgcttaca-tttttataaattaactatcattttttatgaaagaaataggta 209  Q
    ||||||||||| |||  |||| |||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||| |||||| |||||| |     
T  33423031 atagggaacttttactatacatccgcaaattacggtgtaccggtactctcgcttacaatttttataaattaactatcatttttaatgaaaaaaatagctg 33423130  T
Q  210 tttgttgacatatatatttt 229  Q
    ||||||||||||||||||||    
T  33423131 tttgttgacatatatatttt 33423150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 114 - 229
Target Start/End: Complemental strand, 59325 - 59208
Alignment:
Q  114 gggaacttctacggtacacccgcaaattaagg-tgtaccggtactctcgcttaca-tttttataaattaactatcattttttatgaaagaaataggtatt 211  Q
    |||||||||||||||||||| ||||||| | | |||||||||||||||||||||| |||||||||||||||||| ||||||||||||  |||||||| ||    
T  59325 gggaacttctacggtacacctgcaaatttatgatgtaccggtactctcgcttacaatttttataaattaactataattttttatgaagaaaataggtgtt 59226  T
Q  212 tgttgacatatatatttt 229  Q
    ||||||||||||||||||    
T  59225 tgttgacatatatatttt 59208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 114 - 229
Target Start/End: Original strand, 3383191 - 3383308
Alignment:
Q  114 gggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgcttac-atttttataaattaactatca-ttttttatgaaagaaataggtatt 211  Q
    |||||||||||||||||| ||| |||||| ||||||||||||||||| ||||| ||||||||||||||||||||| |||||||||||  |||||||| ||    
T  3383191 gggaacttctacggtacatccgtaaattacggtgtaccggtactctcacttacaatttttataaattaactatcatttttttatgaagaaaataggtgtt 3383290  T
Q  212 tgttgacatatatatttt 229  Q
    ||||||||||||||||||    
T  3383291 tgttgacatatatatttt 3383308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 118 - 229
Target Start/End: Original strand, 42427572 - 42427684
Alignment:
Q  118 acttctacggtacacccgcaaattaaggtgtaccggtactctcgcttaca-tttttataaattaactatcattttttatgaaagaaataggtatttgttg 216  Q
    ||||||| |||||||||| |||||| ||||||||| |||||| ||||||| |||||||||||||||||||||||||||||||  |||||||| |||||||    
T  42427572 acttctatggtacacccgtaaattacggtgtaccgatactcttgcttacaatttttataaattaactatcattttttatgaagaaaataggtgtttgttg 42427671  T
Q  217 acatatatatttt 229  Q
    |||||||||||||    
T  42427672 acatatatatttt 42427684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 116 - 229
Target Start/End: Original strand, 3810452 - 3810566
Alignment:
Q  116 gaacttctacggtacacccgcaaattaaggtgtaccggtactctcgcttaca-tttttataaattaactatcattttttatgaaagaaataggtatttgt 214  Q
    |||||||||||  |||||| |||||||||||||||||||||| ||||||||| |||||||||||||||||| ||||||||||||  |||||||| ||| |    
T  3810452 gaacttctacgacacacccacaaattaaggtgtaccggtactttcgcttacaatttttataaattaactattattttttatgaagaaaataggtgttttt 3810551  T
Q  215 tgacatatatatttt 229  Q
    |||||||||||||||    
T  3810552 tgacatatatatttt 3810566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 114 - 226
Target Start/End: Complemental strand, 6884568 - 6884454
Alignment:
Q  114 gggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgcttaca-tttttataaattaactatcattttttatgaaag-aaataggtatt 211  Q
    |||||||| |||||||||   | ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||| ||    
T  6884568 gggaacttttacggtacatttgtaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaaagaaaataggtgtt 6884469  T
Q  212 tgttgacatatatat 226  Q
    |||||| ||||||||    
T  6884468 tgttgatatatatat 6884454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 115 - 158
Target Start/End: Complemental strand, 37909763 - 37909720
Alignment:
Q  115 ggaacttctacggtacacccgcaaattaaggtgtaccggtactc 158  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  37909763 ggaacttctacggtacacccgcaaattaaggtgtaccggtactc 37909720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 113 - 214
Target Start/End: Original strand, 1580246 - 1580348
Alignment:
Q  113 agggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgctt-acatttttataaattaactatcattttttatgaaagaaataggtatt 211  Q
    |||||| ||||||||||||| | |||| | ||||||||||||||||| |||| | | |||||| ||||||| || |||||||||| || |||||| ||||    
T  1580246 agggaatttctacggtacactcacaaagtgaggtgtaccggtactcttgcttcataattttatgaattaacgataattttttatgtaataaatagctatt 1580345  T
Q  212 tgt 214  Q
    |||    
T  1580346 tgt 1580348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 113 - 214
Target Start/End: Original strand, 25331454 - 25331556
Alignment:
Q  113 agggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgctt-acatttttataaattaactatcattttttatgaaagaaataggtatt 211  Q
    |||||||||||||||||||| | |||| | ||||||||||||||||  ||||   | |||||||||| ||||||||||||||||| |  |||||| ||||    
T  25331454 agggaacttctacggtacactcacaaaatgaggtgtaccggtactcctgcttcttaattttataaatgaactatcattttttatgtagtaaatagctatt 25331553  T
Q  212 tgt 214  Q
    |||    
T  25331554 tgt 25331556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 113 - 229
Target Start/End: Original strand, 6438171 - 6438287
Alignment:
Q  113 agggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgctt-acatttttataaattaactatcattttttatgaaagaaataggtatt 211  Q
    ||||||||||||||||| | ||| |||||||||||| ||||||||||   || | |  |||||||||||||||| | ||||||||||| ||| || ||||    
T  6438171 agggaacttctacggtaaatccgtaaattaaggtgtgccggtactcttaattcaaaaatttataaattaactat-aatttttatgaaataaaaagctatt 6438269  T
Q  212 tgttgacatatatatttt 229  Q
    |||||| || ||||||||    
T  6438270 tgttgatatttatatttt 6438287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 114 - 212
Target Start/End: Complemental strand, 30981292 - 30981193
Alignment:
Q  114 gggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgctt-acatttttataaattaactatcattttttatgaaagaaataggtattt 212  Q
    ||||| || |||||||||| | |||| | ||||||| |||||||| ||||| | | |||||||||||||  |||||||||||||||| |||||| |||||    
T  30981292 gggaatttttacggtacactcacaaagtgaggtgtatcggtactcccgcttcataattttataaattaatgatcattttttatgaaataaatagctattt 30981193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 110 - 157
Target Start/End: Complemental strand, 32499555 - 32499508
Alignment:
Q  110 aatagggaacttctacggtacacccgcaaattaaggtgtaccggtact 157  Q
    |||||||| |||||||||||||||| ||||||||||| ||||||||||    
T  32499555 aatagggatcttctacggtacacccacaaattaaggtataccggtact 32499508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 114 - 214
Target Start/End: Original strand, 38073106 - 38073206
Alignment:
Q  114 gggaacttctacggtacacc-cgcaaattaaggtgtaccggtactctcgctt-acatttttataaattaactatcattttttatgaaagaaataggtatt 211  Q
    |||||||||||||||||||| | |||||| |||||||||||||||||  ||| | |  ||||||||||||| ||||  |||||||||| |||||| ||||    
T  38073106 gggaacttctacggtacacctcacaaattgaggtgtaccggtactcttacttcataaatttataaattaacgatca--ttttatgaaataaatagatatt 38073203  T
Q  212 tgt 214  Q
    |||    
T  38073204 tgt 38073206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 116 - 214
Target Start/End: Complemental strand, 45157918 - 45157819
Alignment:
Q  116 gaacttctacggtacacccgcaaattaaggtgtaccggtactctcgctt-acatttttataaattaactatcattttttatgaaagaaataggtatttgt 214  Q
    ||||||||||||||||| | |||| | |||||||||| ||||||  ||| | |  ||||||||||||| |||||||||||||||| |||||  |||||||    
T  45157918 gaacttctacggtacactcacaaaatgaggtgtaccgatactctttcttcataagtttataaattaacgatcattttttatgaaataaataactatttgt 45157819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 114 - 191
Target Start/End: Original strand, 45690499 - 45690578
Alignment:
Q  114 gggaacttctacggtacacc-cgcaaattaaggtgtaccggtactctcgct-tacatttttataaattaactatcatttt 191  Q
    |||||||||||||||||||| | |||||| ||||||||||||||||||||| || |  ||||||||||||  ||||||||    
T  45690499 gggaacttctacggtacacctcacaaattgaggtgtaccggtactctcgctctataaatttataaattaaggatcatttt 45690578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 116 - 158
Target Start/End: Complemental strand, 33413110 - 33413068
Alignment:
Q  116 gaacttctacggtacacccgcaaattaaggtgtaccggtactc 158  Q
    |||||||||||||||||| | ||||||||||||||||||||||    
T  33413110 gaacttctacggtacacctgtaaattaaggtgtaccggtactc 33413068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 113 - 158
Target Start/End: Original strand, 6513261 - 6513306
Alignment:
Q  113 agggaacttctacggtacacccgcaaattaaggtgtaccggtactc 158  Q
    ||||||||||||||||||| | | ||||||||||||||||||||||    
T  6513261 agggaacttctacggtacatctgtaaattaaggtgtaccggtactc 6513306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 114 - 214
Target Start/End: Original strand, 9122156 - 9122257
Alignment:
Q  114 gggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgctt-acatttttataaattaactatcattttttatgaaagaaataggtattt 212  Q
    ||||||||||||||||||| | |||| |||||||||||||||||   ||||   | |||||||||| ||| ||||||||||||| || |||||  |||||    
T  9122156 gggaacttctacggtacactcacaaaataaggtgtaccggtacttctgcttcttaattttataaatgaacgatcattttttatgtaataaataactattt 9122255  T
Q  213 gt 214  Q
    ||    
T  9122256 gt 9122257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 117 - 158
Target Start/End: Complemental strand, 11598518 - 11598477
Alignment:
Q  117 aacttctacggtacacccgcaaattaaggtgtaccggtactc 158  Q
    ||||||||||||||||| |||||||||||||||||| |||||    
T  11598518 aacttctacggtacacctgcaaattaaggtgtaccgatactc 11598477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 110 - 158
Target Start/End: Complemental strand, 9589524 - 9589476
Alignment:
Q  110 aatagggaacttctacggtacacccgcaaattaaggtgtaccggtactc 158  Q
    ||||||||||||||||||||||| | |||| | ||||||||||||||||    
T  9589524 aatagggaacttctacggtacactcacaaaatgaggtgtaccggtactc 9589476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 113 - 153
Target Start/End: Original strand, 34438186 - 34438226
Alignment:
Q  113 agggaacttctacggtacacccgcaaattaaggtgtaccgg 153  Q
    |||||||||||| |||||||||| |||||||||||||||||    
T  34438186 agggaacttctatggtacacccgtaaattaaggtgtaccgg 34438226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 114 - 158
Target Start/End: Original strand, 43690022 - 43690066
Alignment:
Q  114 gggaacttctacggtacacccgcaaattaaggtgtaccggtactc 158  Q
    ||||||||||||| ||||||||||||||||||||||  |||||||    
T  43690022 gggaacttctacgatacacccgcaaattaaggtgtattggtactc 43690066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 113 - 205
Target Start/End: Complemental strand, 3261313 - 3261220
Alignment:
Q  113 agggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgcttacat--ttttataaattaactatcattttttatgaaagaaata 205  Q
    |||||||||||||||||||  |  ||| | || ||||||||||||||||||| |||  ||||| |||||||| ||||||||| ||| ||||||||    
T  3261313 agggaacttctacggtacattcataaagtgagatgtaccggtactctcgctt-catgattttacaaattaacgatcatttttcatgtaagaaata 3261220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 113 - 164
Target Start/End: Original strand, 38617727 - 38617778
Alignment:
Q  113 agggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgctt 164  Q
    |||||||||| ||||||||| || ||||| ||||||||||||||||| ||||    
T  38617727 agggaacttcaacggtacactcgtaaattgaggtgtaccggtactcttgctt 38617778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 113 - 158
Target Start/End: Original strand, 8333890 - 8333936
Alignment:
Q  113 agggaacttctacggtacacc-cgcaaattaaggtgtaccggtactc 158  Q
    ||||||||||||||||||||| | |||||| ||||||||||||||||    
T  8333890 agggaacttctacggtacacctcacaaattgaggtgtaccggtactc 8333936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 117 - 214
Target Start/End: Original strand, 17451285 - 17451383
Alignment:
Q  117 aacttctacggtacacccgcaaattaaggtgtaccggtactctcgctt-acatttttataaattaactatcattttttatgaaagaaataggtatttgt 214  Q
    |||||||||||||||| | |||| ||||||||||||||||||  ||||   | |||||||| | ||| ||||||||||||| |  |||||| |||||||    
T  17451285 aacttctacggtacactcacaaaataaggtgtaccggtactcctgcttcttaattttataagtgaacgatcattttttatgtagtaaatagctatttgt 17451383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 113 - 214
Target Start/End: Original strand, 32602302 - 32602404
Alignment:
Q  113 agggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgctt-acatttttataaattaactatcattttttatgaaagaaataggtatt 211  Q
    |||||||||||||||||||| | |||| | ||||||||||||||||  ||||   | |||||||||| ||| || |||||||||| |  |||||| ||||    
T  32602302 agggaacttctacggtacactcacaaaatgaggtgtaccggtactcctgcttcttaattttataaatgaacgataattttttatgtagtaaatagctatt 32602401  T
Q  212 tgt 214  Q
    |||    
T  32602402 tgt 32602404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 113 - 214
Target Start/End: Original strand, 35895310 - 35895412
Alignment:
Q  113 agggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgctt-acatttttataaattaactatcattttttatgaaagaaataggtatt 211  Q
    ||||||||| |||||||||| |  ||| | ||||||||||||||||  |||| | | |||||||||||||| | ||||||||||| || |||||  ||||    
T  35895310 agggaacttttacggtacactcataaagtgaggtgtaccggtactcctgcttcataattttataaattaacgaccattttttatgtaataaataactatt 35895409  T
Q  212 tgt 214  Q
    |||    
T  35895410 tgt 35895412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 113 - 158
Target Start/End: Original strand, 41555430 - 41555476
Alignment:
Q  113 agggaacttctacggtacacc-cgcaaattaaggtgtaccggtactc 158  Q
    ||||||||||||||||||||| | |||||| ||||||||||||||||    
T  41555430 agggaacttctacggtacacctcacaaattgaggtgtaccggtactc 41555476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 113 - 158
Target Start/End: Original strand, 7673294 - 7673339
Alignment:
Q  113 agggaacttctacggtacacccgcaaattaaggtgtaccggtactc 158  Q
    |||||||||||||||||||| | |||| | ||||||||||||||||    
T  7673294 agggaacttctacggtacactcacaaaatgaggtgtaccggtactc 7673339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 117 - 158
Target Start/End: Original strand, 20212156 - 20212197
Alignment:
Q  117 aacttctacggtacacccgcaaattaaggtgtaccggtactc 158  Q
    ||||||||| ||||||||| ||| ||||||||||||||||||    
T  20212156 aacttctaccgtacacccgtaaactaaggtgtaccggtactc 20212197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 169 - 214
Target Start/End: Complemental strand, 27401080 - 27401035
Alignment:
Q  169 ttttataaattaactatcattttttatgaaagaaataggtatttgt 214  Q
    |||||||||||||| |||||||||||||||| |||||  |||||||    
T  27401080 ttttataaattaacgatcattttttatgaaataaataattatttgt 27401035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 156
Target Start/End: Complemental strand, 22595136 - 22595100
Alignment:
Q  120 ttctacggtacacccgcaaattaaggtgtaccggtac 156  Q
    |||||||||||||||  ||||||||||||||||||||    
T  22595136 ttctacggtacacccttaaattaaggtgtaccggtac 22595100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 156
Target Start/End: Complemental strand, 29943955 - 29943919
Alignment:
Q  120 ttctacggtacacccgcaaattaaggtgtaccggtac 156  Q
    |||||||||||||||  ||||||||||||||||||||    
T  29943955 ttctacggtacacccttaaattaaggtgtaccggtac 29943919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 169 - 229
Target Start/End: Complemental strand, 39620544 - 39620484
Alignment:
Q  169 ttttataaattaactatcattttttatgaaagaaataggtatttgttgacatatatatttt 229  Q
    |||||||||||||| ||||||||||||| || |||||| ||||| || | || ||||||||    
T  39620544 ttttataaattaacgatcattttttatgtaacaaatagctattttttaatatttatatttt 39620484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 109; Significance: 6e-55; HSPs: 42)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 113 - 229
Target Start/End: Original strand, 41913095 - 41913211
Alignment:
Q  113 agggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgcttacatttttataaattaactatcattttttatgaaagaaataggtattt 212  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  41913095 agggaacttctatggtacacccgcaaattaaggtgtaccggtactctcgcttacatttttataaattaactatcattttttatgaaagaaataggtgttt 41913194  T
Q  213 gttgacatatatatttt 229  Q
    |||||||||||||||||    
T  41913195 gttgacatatatatttt 41913211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 114 - 229
Target Start/End: Complemental strand, 42711335 - 42711220
Alignment:
Q  114 gggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgcttacatttttataaattaactatcattttttatgaaagaaataggtatttg 213  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  42711335 gggaacttctacggtacatccgcaaattaaggtgtaccggtactctcgcttacatttttataaattaactatcattttttatgaaagaaataggtgtttg 42711236  T
Q  214 ttgacatatatatttt 229  Q
    ||||||||||||||||    
T  42711235 ttgacatatatatttt 42711220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 110 - 229
Target Start/End: Complemental strand, 40942286 - 40942166
Alignment:
Q  110 aatagggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgcttacatttttataaattaactatcatt-ttttatgaaagaaataggt 208  Q
    ||||||||||||||| |||||| ||| |||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  40942286 aatagggaacttctatggtacatccgtaaattaagatgtaccggtactctcgcttacatttttataaattaactatcatttttttatgaaagaaataggt 40942187  T
Q  209 atttgttgacatatatatttt 229  Q
     ||||||||||||||||||||    
T  40942186 gtttgttgacatatatatttt 40942166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 113 - 229
Target Start/End: Complemental strand, 28327474 - 28327356
Alignment:
Q  113 agggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgcttac-atttttataaattaactatcattttttatgaaag-aaataggtat 210  Q
    |||||||||||||||||||||||||||||||| ||||||||| ||||||||||| |||||||||||||||||||||||||||||||||| |||| ||| |    
T  28327474 agggaacttctacggtacacccgcaaattaagctgtaccggtcctctcgcttacaatttttataaattaactatcattttttatgaaagaaaattggtgt 28327375  T
Q  211 ttgttgacatatatatttt 229  Q
    |||||||||||||||||||    
T  28327374 ttgttgacatatatatttt 28327356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 113 - 229
Target Start/End: Original strand, 21699291 - 21699408
Alignment:
Q  113 agggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgcttacatttttataaattaactatca-ttttttatgaaagaaataggtatt 211  Q
    |||||| ||||| ||||||| ||||||||||||||||||| |||||||| ||||||||||||||||||| ||||| ||||||||||||||||||||| ||    
T  21699291 agggaatttctatggtacactcgcaaattaaggtgtaccgatactctcgtttacatttttataaattaattatcatttttttatgaaagaaataggtgtt 21699390  T
Q  212 tgttgacatatatatttt 229  Q
    ||||||||||||||||||    
T  21699391 tgttgacatatatatttt 21699408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 111 - 229
Target Start/End: Complemental strand, 30863202 - 30863083
Alignment:
Q  111 atagggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgcttaca-tttttataaattaactatcattttttatgaaagaaataggta 209  Q
    |||||| |||||||  ||||||||| |||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||  ||||||||     
T  30863202 ataggggacttctattgtacacccgtaaattacggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaagaaaataggtg 30863103  T
Q  210 tttgttgacatatatatttt 229  Q
    ||||||||||||||||||||    
T  30863102 tttgttgacatatatatttt 30863083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 117 - 229
Target Start/End: Complemental strand, 41381886 - 41381772
Alignment:
Q  117 aacttctacggtacacccgcaaattaaggtgtaccggtactctcgcttaca-tttttataaattaactatcattttttatgaaag-aaataggtatttgt 214  Q
    ||||||||||||||||||| ||||||| ||| ||||||||| | ||||||| ||||||||||||||||||||||||||||||||| |||||||| |||||    
T  41381886 aacttctacggtacacccgtaaattaatgtgcaccggtacttttgcttacaatttttataaattaactatcattttttatgaaagaaaataggtctttgt 41381787  T
Q  215 tgacatatatatttt 229  Q
    |||||||||||||||    
T  41381786 tgacatatatatttt 41381772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 111 - 229
Target Start/End: Original strand, 38129382 - 38129501
Alignment:
Q  111 atagggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgcttaca-tttttataaattaactatcattttttatgaaagaaataggta 209  Q
    |||||| ||||||| |||||||||| |||||| |||||||||||| ||| ||||||| |||||||||||||||||||||||||||||||  ||||| ||     
T  38129382 ataggggacttctatggtacacccgtaaattacggtgtaccggtattcttgcttacaatttttataaattaactatcattttttatgaagaaaataagtg 38129481  T
Q  210 tttgttgacatatatatttt 229  Q
    ||||||||||||||||||||    
T  38129482 tttgttgacatatatatttt 38129501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 137 - 229
Target Start/End: Complemental strand, 3910314 - 3910220
Alignment:
Q  137 aaattaaggtgtaccggtactctcgcttaca-tttttataaattaactatcattttttatgaaag-aaataggtatttgttgacatatatatttt 229  Q
    |||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||    
T  3910314 aaataaaggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaaagaaaataggtgtttgttgacatatatatttt 3910220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 114 - 203
Target Start/End: Complemental strand, 27956691 - 27956601
Alignment:
Q  114 gggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgcttac-atttttataaattaactatcattttttatgaaagaaa 203  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||| | |||||||    
T  27956691 gggaacttctatggtacacccgcaaattaaggtgtaccggtactctcgcttacaaattttataaattaactatcattttttgtaaaagaaa 27956601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 118 - 229
Target Start/End: Original strand, 30623724 - 30623836
Alignment:
Q  118 acttctacggtacacccgcaaattaaggtgtaccggtactctcgcttaca-tttttataaattaactatcattttttatgaaagaaataggtatttgttg 216  Q
    ||||||| |||||||||  |||||| ||||||||| |||||||||||||| |||||||||||||||||||||||||||| ||  ||||| || |||||||    
T  30623724 acttctatggtacacccataaattacggtgtaccgatactctcgcttacaatttttataaattaactatcattttttataaagaaaataagtgtttgttg 30623823  T
Q  217 acatatatatttt 229  Q
    |||||||||||||    
T  30623824 acatatatatttt 30623836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 117 - 224
Target Start/End: Original strand, 1690996 - 1691104
Alignment:
Q  117 aacttctacggtacacccgcaaattaaggtgtaccggtactctcgcttaca-tttttataaattaactatcattttttatgaaagaaataggtatttgtt 215  Q
    ||||||||| ||||||||| |||||| ||| |||||||||||||  ||||| ||||| |||||||||||||||||||||||||  |||||||| ||||||    
T  1690996 aacttctaccgtacacccgtaaattatggtataccggtactctcatttacaatttttttaaattaactatcattttttatgaagaaaataggtgtttgtt 1691095  T
Q  216 gacatatat 224  Q
    |||||||||    
T  1691096 gacatatat 1691104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 113 - 229
Target Start/End: Original strand, 30936093 - 30936209
Alignment:
Q  113 agggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgctt-acatttttataaattaactatcattttttatgaaagaaataggtatt 211  Q
    |||||||||||||||||||||||||||||||||||||||||||||||  ||| | |  ||||||||||||||||||  |||||||||| ||| || ||||    
T  30936093 agggaacttctacggtacacccgcaaattaaggtgtaccggtactcttacttcaaaaatttataaattaactatca-attttatgaaataaaaagctatt 30936191  T
Q  212 tgttgacatatatatttt 229  Q
    |||||| || ||||||||    
T  30936192 tgttgatatttatatttt 30936209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 116 - 186
Target Start/End: Complemental strand, 45461731 - 45461660
Alignment:
Q  116 gaacttctacggtacacccgcaaattaaggtgtaccggtactctcgcttac-atttttataaattaactatc 186  Q
    |||||||||||||||||| |||||||| ||||||||||||||||||||||| |||||||||| |||||||||    
T  45461731 gaacttctacggtacacctgcaaattacggtgtaccggtactctcgcttacaatttttataatttaactatc 45461660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 114 - 229
Target Start/End: Original strand, 45857475 - 45857590
Alignment:
Q  114 gggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgctt-acatttttataaattaactatcattttttatgaaagaaataggtattt 212  Q
    |||||||| |||||||||||||||||||||||||||||||||||||  ||| | |  |||||||||||||||| |  |||||||||| ||| || |||||    
T  45857475 gggaacttttacggtacacccgcaaattaaggtgtaccggtactcttacttcaaaaatttataaattaactatta-cttttatgaaataaaaagctattt 45857573  T
Q  213 gttgacatatatatttt 229  Q
    ||||| || ||||||||    
T  45857574 gttgatatttatatttt 45857590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 113 - 158
Target Start/End: Complemental strand, 18990495 - 18990450
Alignment:
Q  113 agggaacttctacggtacacccgcaaattaaggtgtaccggtactc 158  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  18990495 agggaacttctacggtacacccgcaaattaaggtgtaccggtactc 18990450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 114 - 217
Target Start/End: Original strand, 44963823 - 44963926
Alignment:
Q  114 gggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgctt-acatttttataaattaactatcattttttatgaaagaaataggtattt 212  Q
    ||||||||||| ||||||||| ||| ||||||||||||||||||||  ||| | |  |||||||||||||||||| ||||||||||| ||| || |||||    
T  44963823 gggaacttctatggtacacccacaatttaaggtgtaccggtactcttacttcaaaaatttataaattaactatca-tttttatgaaataaaaagttattt 44963921  T
Q  213 gttga 217  Q
    |||||    
T  44963922 gttga 44963926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 112 - 159
Target Start/End: Complemental strand, 34118878 - 34118831
Alignment:
Q  112 tagggaacttctacggtacacccgcaaattaaggtgtaccggtactct 159  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||    
T  34118878 tagggaacttctacggtacacccgcaaattaaggtgtactggtactct 34118831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 112 - 212
Target Start/End: Original strand, 26605054 - 26605155
Alignment:
Q  112 tagggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgctt-acatttttataaattaactatcattttttatgaaagaaataggtat 210  Q
    ||||||||||||||||||||| | |||| | ||||||||||||||||| |||| | | |||||||||||||| || |||||||||  || |||||| |||    
T  26605054 tagggaacttctacggtacactcacaaaatgaggtgtaccggtactcttgcttcataattttataaattaacgataattttttatataataaatagttat 26605153  T
Q  211 tt 212  Q
    ||    
T  26605154 tt 26605155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 114 - 217
Target Start/End: Original strand, 8770370 - 8770473
Alignment:
Q  114 gggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgctt-acatttttataaattaactatcattttttatgaaagaaataggtattt 212  Q
    |||| ||| |||||||||||||||||||||||||||||| |||||| |||| | |  | |||||||||||||||| ||||||||||| ||| || | |||    
T  8770370 gggatcttatacggtacacccgcaaattaaggtgtaccgatactcttgcttcaaaaatctataaattaactatca-tttttatgaaataaagagttgttt 8770468  T
Q  213 gttga 217  Q
    |||||    
T  8770469 gttga 8770473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 115 - 205
Target Start/End: Original strand, 35291327 - 35291418
Alignment:
Q  115 ggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgctt-acatttttataaattaactatcattttttatgaaagaaata 205  Q
    |||||||||||||||||| | |||| | |||||||||||||||||  ||| | | |||||||||||||| || ||||||||||||| |||||    
T  35291327 ggaacttctacggtacactcacaaaatgaggtgtaccggtactctttcttcataattttataaattaacgattattttttatgaaataaata 35291418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 120 - 158
Target Start/End: Original strand, 20438822 - 20438860
Alignment:
Q  120 ttctacggtacacccgcaaattaaggtgtaccggtactc 158  Q
    |||||||||||||||||||||||||||||||||||||||    
T  20438822 ttctacggtacacccgcaaattaaggtgtaccggtactc 20438860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 112 - 158
Target Start/End: Complemental strand, 43750483 - 43750437
Alignment:
Q  112 tagggaacttctacggtacacccgcaaattaaggtgtaccggtactc 158  Q
    |||||||||||||||| ||||| ||||||||||||||||||||||||    
T  43750483 tagggaacttctacgggacacctgcaaattaaggtgtaccggtactc 43750437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 113 - 193
Target Start/End: Complemental strand, 15954668 - 15954587
Alignment:
Q  113 agggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgctt-acatttttataaattaactatcatttttt 193  Q
    |||||||||||||||||||| | |||| | |||||||||||||||||  ||| | | |||||||||||||| ||||||||||    
T  15954668 agggaacttctacggtacactcacaaaatgaggtgtaccggtactctttcttcataattttataaattaacgatcatttttt 15954587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 110 - 205
Target Start/End: Original strand, 32529176 - 32529272
Alignment:
Q  110 aatagggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgctt-acatttttataaattaactatcattttttatgaaagaaata 205  Q
    ||||||||||||||||||||||| | |||| | |||  || |||||||||  ||| | | |||||||||||||| |||||||||||||||| |||||    
T  32529176 aatagggaacttctacggtacactcacaaaatgaggcatatcggtactctttcttcataattttataaattaacgatcattttttatgaaataaata 32529272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 110 - 229
Target Start/End: Original strand, 43631051 - 43631170
Alignment:
Q  110 aatagggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgctt-acatttttataaattaactatcattttttatgaaagaaataggt 208  Q
    ||||||||||||||| ||||||| || | ||| ||||||||||||||||| |||| | |  | |||||| |||| ||||  |||||||||| |||||| |    
T  43631051 aatagggaacttctatggtacactcgtagattgaggtgtaccggtactcttgcttcataaatctataaactaacgatca-attttatgaaataaatagtt 43631149  T
Q  209 atttgttgacatatatatttt 229  Q
    |||||| ||||| ||||||||    
T  43631150 atttgtcgacatttatatttt 43631170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 116 - 212
Target Start/End: Original strand, 17306603 - 17306700
Alignment:
Q  116 gaacttctacggtacacccgcaaattaaggtgtaccggtactctcgcttacat--ttttataaattaactatcattttttatgaaagaaataggtattt 212  Q
    ||||||||| ||||||| | |||| | || ||||||||||||||||||| |||  ||||| |||||||| ||||||||| ||| ||||||||| |||||    
T  17306603 gaacttctatggtacactcacaaagtgagatgtaccggtactctcgctt-catgattttacaaattaacgatcatttttcatgtaagaaatagctattt 17306700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 114 - 214
Target Start/End: Complemental strand, 3214932 - 3214826
Alignment:
Q  114 gggaacttctacggtacacccgcaaattaaggtgtaccggtactc-----tcgctt-acatttttataaattaactatcattttttatgaaagaaatagg 207  Q
    ||||||||||||||||||| | |||| | ||||||||||||||||     | |||| | | |||||||||||||| ||||||||||||| || ||||||     
T  3214932 gggaacttctacggtacactcacaaagtgaggtgtaccggtactccagtcttgcttcataattttataaattaacgatcattttttatgtaataaatagc 3214833  T
Q  208 tatttgt 214  Q
    |||||||    
T  3214832 tatttgt 3214826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 113 - 158
Target Start/End: Complemental strand, 30317596 - 30317551
Alignment:
Q  113 agggaacttctacggtacacccgcaaattaaggtgtaccggtactc 158  Q
    |||||| |||||||||||||| ||||||||||||||| ||||||||    
T  30317596 agggaatttctacggtacacctgcaaattaaggtgtatcggtactc 30317551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 113 - 205
Target Start/End: Complemental strand, 35358110 - 35358017
Alignment:
Q  113 agggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgcttac-atttttataaattaactatcattttttatgaaagaaata 205  Q
    |||||| ||||||||||||| | |||| | ||||||||||||| |||  ||||  | |||||||||||||  |||||||||||||||| |||||    
T  35358110 agggaatttctacggtacactcacaaaatgaggtgtaccggtagtctttcttaataattttataaattaaagatcattttttatgaaataaata 35358017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 113 - 229
Target Start/End: Original strand, 41046837 - 41046954
Alignment:
Q  113 agggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgctt-acatttttataaattaactatcattttttatgaaagaaataggtatt 211  Q
    |||||| |||||||||||||   |||| | |||||||||| |||| | |||| | | |||||||||||||| || ||||||||||| | |||||| ||||    
T  41046837 agggaatttctacggtacacttacaaagtgaggtgtaccgatactattgctttataattttataaattaacgataattttttatgatataaatagttatt 41046936  T
Q  212 tgttgacatatatatttt 229  Q
    |||| | || ||||||||    
T  41046937 tgttaatatttatatttt 41046954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 111 - 158
Target Start/End: Original strand, 21919685 - 21919733
Alignment:
Q  111 atagggaacttctacggtacacc-cgcaaattaaggtgtaccggtactc 158  Q
    ||||||||||||||||||||||| | |||||| ||||||||||||||||    
T  21919685 atagggaacttctacggtacacctcacaaattgaggtgtaccggtactc 21919733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 114 - 212
Target Start/End: Original strand, 7574551 - 7574650
Alignment:
Q  114 gggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgctt-acatttttataaattaactatcattttttatgaaagaaataggtattt 212  Q
    ||||||||||||||||||| || ||| |||||||||||| |||||  ||||   | |||||||||| ||| || |||||||||| || |||||| |||||    
T  7574551 gggaacttctacggtacactcgtaaaataaggtgtaccgatactcctgcttcttaattttataaatgaacgataattttttatgtaataaatagctattt 7574650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 115 - 205
Target Start/End: Original strand, 23406653 - 23406744
Alignment:
Q  115 ggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgctt-acatttttataaattaactatcattttttatgaaagaaata 205  Q
    ||||||| |||||||||| | |||| | ||||||||||||||||  |||| | | ||||||| |||||| ||||||||||||| || |||||    
T  23406653 ggaacttatacggtacactcacaaaatgaggtgtaccggtactcctgcttcataattttatatattaacgatcattttttatgcaataaata 23406744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 159
Target Start/End: Original strand, 27567156 - 27567206
Alignment:
Q  110 aatagggaacttctacggtacacc-cgcaaattaaggtgtaccggtactct 159  Q
    |||||||||||| ||||||||||| | |||||| |||||||||||||||||    
T  27567156 aatagggaacttttacggtacacctcacaaatttaggtgtaccggtactct 27567206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 114 - 158
Target Start/End: Original strand, 23182390 - 23182435
Alignment:
Q  114 gggaacttctacggtacacc-cgcaaattaaggtgtaccggtactc 158  Q
    |||||||||||||||||||| | ||||||||||||||| |||||||    
T  23182390 gggaacttctacggtacacctcacaaattaaggtgtactggtactc 23182435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 169 - 214
Target Start/End: Original strand, 37504615 - 37504660
Alignment:
Q  169 ttttataaattaactatcattttttatgaaagaaataggtatttgt 214  Q
    |||||||||||||| |||||||||||||||| |||||  |||||||    
T  37504615 ttttataaattaacgatcattttttatgaaataaataactatttgt 37504660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 114 - 158
Target Start/End: Original strand, 28264750 - 28264794
Alignment:
Q  114 gggaacttctacggtacacccgcaaattaaggtgtaccggtactc 158  Q
    ||||||||||||||||||| || ||| |||||||||||| |||||    
T  28264750 gggaacttctacggtacactcgtaaaataaggtgtaccgatactc 28264794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 112 - 195
Target Start/End: Complemental strand, 30891665 - 30891581
Alignment:
Q  112 tagggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgctt-acatttttataaattaactatcattttttat 195  Q
    ||||||||||| |||| |||  | |||| |||||||||||| ||||||  ||| | | |||||||||||||| ||||||||||||    
T  30891665 tagggaacttcaacggcacaatcacaaaataaggtgtaccgatactctttcttcataattttataaattaacgatcattttttat 30891581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 111 - 158
Target Start/End: Complemental strand, 31743711 - 31743663
Alignment:
Q  111 atagggaacttctacggtacacc-cgcaaattaaggtgtaccggtactc 158  Q
    ||||||||||||||||||||||| | ||||||  |||||||||||||||    
T  31743711 atagggaacttctacggtacacctcacaaattgtggtgtaccggtactc 31743663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 111 - 159
Target Start/End: Complemental strand, 43069517 - 43069469
Alignment:
Q  111 atagggaacttctacggtacacccgcaaattaaggtgtaccggtactct 159  Q
    ||||||||||||||||||||||| | || ||||| |||| |||||||||    
T  43069517 atagggaacttctacggtacacctgtaagttaagatgtatcggtactct 43069469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 156
Target Start/End: Original strand, 45704507 - 45704543
Alignment:
Q  120 ttctacggtacacccgcaaattaaggtgtaccggtac 156  Q
    |||||||||||||||  ||||||||||||||||||||    
T  45704507 ttctacggtacacccttaaattaaggtgtaccggtac 45704543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 109; Significance: 6e-55; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 113 - 229
Target Start/End: Complemental strand, 2259311 - 2259195
Alignment:
Q  113 agggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgcttacatttttataaattaactatcattttttatgaaagaaataggtattt 212  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  2259311 agggaacttctacggtacacccgcaaattaaggtgtacaggtactctcgcttacatttttataaattaactatcattttttatgaaagaaataggtgttt 2259212  T
Q  213 gttgacatatatatttt 229  Q
    |||||||||||||||||    
T  2259211 gttgacatatatatttt 2259195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 113 - 229
Target Start/End: Complemental strand, 17546010 - 17545894
Alignment:
Q  113 agggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgcttacatttttataaattaactatcattttttatgaaagaaataggtattt 212  Q
    ||||||||||||  |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  17546010 agggaacttctatagtacacccgcaaattaaggtgtactggtactctcgcttacatttttataaattaactatcattttttatgaaagaaataggtgttt 17545911  T
Q  213 gttgacatatatatttt 229  Q
    |||||||||||||||||    
T  17545910 gttgacatatatatttt 17545894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 113 - 229
Target Start/End: Complemental strand, 6848921 - 6848799
Alignment:
Q  113 agggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgcttacatttttataaattaactatcattttttat------gaaagaaatag 206  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||| ||||||    
T  6848921 agggaacttctacggtacacccgtaaattaaggtgtaccggtactctcgcttacatttttataaattaactatcattttttataaaaaaaaaaaaaatag 6848822  T
Q  207 gtatttgttgacatatatatttt 229  Q
    || ||||||||||||||||||||    
T  6848821 gtgtttgttgacatatatatttt 6848799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 112 - 229
Target Start/End: Complemental strand, 4110963 - 4110845
Alignment:
Q  112 tagggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgcttaca-tttttataaattaactatcattttttatgaaagaaataggtat 210  Q
    ||||| ||||||| |||||||||| |||||| ||||||||||| |||||||||||| |||||||||||||||||||||||||||||||  |||||||| |    
T  4110963 taggggacttctatggtacacccgtaaattacggtgtaccggttctctcgcttacaatttttataaattaactatcattttttatgaagaaaataggtgt 4110864  T
Q  211 ttgttgacatatatatttt 229  Q
    |||||||||||||||||||    
T  4110863 ttgttgacatatatatttt 4110845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 118 - 229
Target Start/End: Complemental strand, 13390790 - 13390678
Alignment:
Q  118 acttctacggtacacccgcaaattaaggtgtaccggtactctcgcttaca-tttttataaattaactatcattttttatgaaagaaataggtatttgttg 216  Q
    ||||||| |||||||| | |||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||  |||||||| |||||||    
T  13390790 acttctatggtacacctgtaaattacggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaagaaaataggtgtttgttg 13390691  T
Q  217 acatatatatttt 229  Q
    |||||||||||||    
T  13390690 acatatatatttt 13390678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 112 - 229
Target Start/End: Complemental strand, 24213320 - 24213202
Alignment:
Q  112 tagggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgcttaca-tttttataaattaactatcattttttatgaaagaaataggtat 210  Q
    ||||||| ||||||||||||||||||||||| ||| || ||||||| || |||||| |||||||||||||||||||||||||||||||  |||||||| |    
T  24213320 tagggaatttctacggtacacccgcaaattacggtatatcggtactttcacttacaatttttataaattaactatcattttttatgaagaaaataggtgt 24213221  T
Q  211 ttgttgacatatatatttt 229  Q
    |||||||||||||||||||    
T  24213220 ttgttgacatatatatttt 24213202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 113 - 229
Target Start/End: Original strand, 32833773 - 32833890
Alignment:
Q  113 agggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgcttac-atttttataaattaactatcattttttatgaaagaaataggtatt 211  Q
    ||||||||||||||||||| |||||||||| ||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||  ||||| || |     
T  32833773 agggaacttctacggtacatccgcaaattacggtgtactggtactctcgcttacaatttttataaattaactatcattttttatgaagaaaataagtgtc 32833872  T
Q  212 tgttgacatatatatttt 229  Q
    | ||||||||||||||||    
T  32833873 tattgacatatatatttt 32833890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 114 - 226
Target Start/End: Original strand, 8401414 - 8401528
Alignment:
Q  114 gggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgcttac-atttttataaattaactatca-ttttttatgaaagaaataggtatt 211  Q
    ||||| ||||||||||||||||||||||| ||||||||| ||||||| ||||| ||||||||||||||||||||| |||||||||||  |||||||| ||    
T  8401414 gggaatttctacggtacacccgcaaattacggtgtaccgctactctcacttacaatttttataaattaactatcatttttttatgaagaaaataggtgtt 8401513  T
Q  212 tgttgacatatatat 226  Q
    |||||||||||||||    
T  8401514 tgttgacatatatat 8401528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 115 - 229
Target Start/End: Original strand, 24487286 - 24487402
Alignment:
Q  115 ggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgcttac-atttttataaattaactatcattttttatgaaag-aaataggtattt 212  Q
    |||| |||||||||  | ||| |||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||| |||| ||| |||    
T  24487286 ggaatttctacggtgtatccgtaaattaaggtgtaccggtactctcgcttacaatttttataagttaactatcattttttatgaaagaaaattggtgttt 24487385  T
Q  213 gttgacatatatatttt 229  Q
    |||||||||||||||||    
T  24487386 gttgacatatatatttt 24487402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 112 - 229
Target Start/End: Complemental strand, 1096624 - 1096507
Alignment:
Q  112 tagggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgctta-catttttataaattaactatcattttttatgaaagaaataggtat 210  Q
    ||||| ||||||| |||||||||| |||||| ||||||||||||||||||||||  ||||||||||||||||||| | |||||||||   |||||||| |    
T  1096624 taggggacttctatggtacacccgtaaattacggtgtaccggtactctcgcttataatttttataaattaactat-aatttttatgaggaaaataggtgt 1096526  T
Q  211 ttgttgacatatatatttt 229  Q
    |||||||||||||||||||    
T  1096525 ttgttgacatatatatttt 1096507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 113 - 229
Target Start/End: Original strand, 26358551 - 26358668
Alignment:
Q  113 agggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgcttaca-tttttataaattaactatcattttttatgaaagaaataggtatt 211  Q
    |||| |||| || |||||| ||| |||||| |||||||| ||||||||||||| | |||||||||||||||||||||||||||||||  ||||| || ||    
T  26358551 aggggacttttatggtacaaccgtaaattatggtgtaccagtactctcgcttataatttttataaattaactatcattttttatgaagaaaatacgtgtt 26358650  T
Q  212 tgttgacatatatatttt 229  Q
    ||||||||||||||||||    
T  26358651 tgttgacatatatatttt 26358668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 113 - 212
Target Start/End: Complemental strand, 33574760 - 33574660
Alignment:
Q  113 agggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgctt-acatttttataaattaactatcattttttatgaaagaaataggtatt 211  Q
    |||||||||||||||||||| | |||| | ||||||||||||||||| |||| | | |||||||||||||| ||||||||||||| || |||||| ||||    
T  33574760 agggaacttctacggtacactcacaaagtgaggtgtaccggtactcttgcttcataattttataaattaacgatcattttttatgtaataaatagctatt 33574661  T
Q  212 t 212  Q
    |    
T  33574660 t 33574660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 113 - 212
Target Start/End: Complemental strand, 33574938 - 33574838
Alignment:
Q  113 agggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgctt-acatttttataaattaactatcattttttatgaaagaaataggtatt 211  Q
    |||||||||||||||||||| | |||| | ||||||||||||||||| |||| | | |||||||||||||| ||||||||||||| || |||||| ||||    
T  33574938 agggaacttctacggtacactcacaaagtgaggtgtaccggtactcttgcttcataattttataaattaacgatcattttttatgtaataaatagctatt 33574839  T
Q  212 t 212  Q
    |    
T  33574838 t 33574838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 115 - 158
Target Start/End: Original strand, 15383204 - 15383247
Alignment:
Q  115 ggaacttctacggtacacccgcaaattaaggtgtaccggtactc 158  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  15383204 ggaacttctacggtacacccgcaaattaaggtgtaccggtactc 15383247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 113 - 229
Target Start/End: Complemental strand, 18772267 - 18772150
Alignment:
Q  113 agggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgctt-acatttttataaattaactatcattttttatgaaagaaataggtatt 211  Q
    |||||||||||||||||||| | |||| | | ||||| ||||||||   ||| | | |||||||||||||| ||||||||||||||||||||||  ||||    
T  18772267 agggaacttctacggtacactcacaaagtgaagtgtatcggtactcctacttcataattttataaattaacgatcattttttatgaaagaaataactatt 18772168  T
Q  212 tgttgacatatatatttt 229  Q
    |||| | || ||||||||    
T  18772167 tgttaatatttatatttt 18772150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 114 - 157
Target Start/End: Original strand, 34195879 - 34195922
Alignment:
Q  114 gggaacttctacggtacacccgcaaattaaggtgtaccggtact 157  Q
    |||||||||||||||||| |||||||||||||||||||||||||    
T  34195879 gggaacttctacggtacatccgcaaattaaggtgtaccggtact 34195922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 113 - 206
Target Start/End: Original strand, 8549562 - 8549656
Alignment:
Q  113 agggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgctt-acatttttataaattaactatcattttttatgaaagaaatag 206  Q
    |||||||||||||||||||| | |||| | |||||||||| ||||||   || | | |||||||||||||| |||||||||||||||| ||||||    
T  8549562 agggaacttctacggtacactcacaaaatgaggtgtaccgatactcttttttcataattttataaattaacgatcattttttatgaaataaatag 8549656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 113 - 229
Target Start/End: Original strand, 29023618 - 29023734
Alignment:
Q  113 agggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgctt-acatttttataaattaactatcattttttatgaaagaaataggtatt 211  Q
    |||||||||||||||||||| || ||||| ||||||||||||||||| |||| | |  | |||||| |||| ||||  |||||||||| |||||| ||||    
T  29023618 agggaacttctacggtacactcgtaaattgaggtgtaccggtactcttgcttcataaatctataaactaacgatca-attttatgaaataaatagttatt 29023716  T
Q  212 tgttgacatatatatttt 229  Q
    ||| | ||| ||||||||    
T  29023717 tgtcggcatttatatttt 29023734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 169 - 229
Target Start/End: Complemental strand, 2565077 - 2565017
Alignment:
Q  169 ttttataaattaactatcattttttatgaaagaaataggtatttgttgacatatatatttt 229  Q
    |||||||||||||| |||||||||||||||| |||||| |||||||| | || ||||||||    
T  2565077 ttttataaattaacgatcattttttatgaaataaatagttatttgttaatatttatatttt 2565017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 113 - 212
Target Start/End: Complemental strand, 4509836 - 4509737
Alignment:
Q  113 agggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgctt-acatttttataaattaactatcattttttatgaaagaaataggtatt 211  Q
    |||||||||||||||||||| | |||| | ||||||||||||||||  |||| | | |||||||||||||| || |||||||||| || |||||| ||||    
T  4509836 agggaacttctacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttataaattaacgat-attttttatgtaataaatagctatt 4509738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 115 - 206
Target Start/End: Original strand, 11763174 - 11763266
Alignment:
Q  115 ggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgctt-acatttttataaattaactatcattttttatgaaagaaatag 206  Q
    |||||||||||||||||| | || | | ||||||||||||||||  |||| | | |||||||||||||| ||||||||||||| || ||||||    
T  11763174 ggaacttctacggtacactcacagagtgaggtgtaccggtactcctgcttcataattttataaattaacgatcattttttatgtaataaatag 11763266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 114 - 229
Target Start/End: Original strand, 31644410 - 31644525
Alignment:
Q  114 gggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgctt-acatttttataaattaactatcattttttatgaaagaaataggtattt 212  Q
    ||||||||||||||||||| || ||||| ||||||| ||||||||| |||| | |  | |||||| |||| ||||  |||||||||| |||||| |||||    
T  31644410 gggaacttctacggtacactcgtaaattgaggtgtatcggtactcttgcttcataaatctataaactaacaatca-attttatgaaataaatagttattt 31644508  T
Q  213 gttgacatatatatttt 229  Q
    || | ||| ||||||||    
T  31644509 gtcggcatttatatttt 31644525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 111 - 205
Target Start/End: Complemental strand, 9687185 - 9687090
Alignment:
Q  111 atagggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgcttac-atttttataaattaactatcattttttatgaaagaaata 205  Q
    |||| ||||||||||||||||| | |||| | ||||||| || ||||||  |||   | |||||||||||||| |||||||||||||||| |||||    
T  9687185 atagagaacttctacggtacactcacaaaatgaggtgtatcgatactctttcttcttaattttataaattaacgatcattttttatgaaataaata 9687090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 114 - 164
Target Start/End: Complemental strand, 19474078 - 19474027
Alignment:
Q  114 gggaacttctacggtacacc-cgcaaattaaggtgtaccggtactctcgctt 164  Q
    |||||||||||||||||||| | |||||| ||||||||||||||||| ||||    
T  19474078 gggaacttctacggtacacctcacaaattgaggtgtaccggtactcttgctt 19474027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 111 - 158
Target Start/End: Complemental strand, 23416906 - 23416859
Alignment:
Q  111 atagggaacttctacggtacacccgcaaattaaggtgtaccggtactc 158  Q
    |||||||||||||||||||||| | |||| | ||||||||||||||||    
T  23416906 atagggaacttctacggtacactcacaaaatgaggtgtaccggtactc 23416859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 112 - 158
Target Start/End: Original strand, 6264941 - 6264987
Alignment:
Q  112 tagggaacttctacggtacacccgcaaattaaggtgtaccggtactc 158  Q
    |||||||||||||||||||| || ||||||||| |||| ||||||||    
T  6264941 tagggaacttctacggtacatccacaaattaagatgtatcggtactc 6264987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 113 - 158
Target Start/End: Complemental strand, 10966031 - 10965985
Alignment:
Q  113 agggaacttctacggtacacc-cgcaaattaaggtgtaccggtactc 158  Q
    ||||||||||||||||||||| | |||||| ||||||||||||||||    
T  10966031 agggaacttctacggtacacctcacaaattgaggtgtaccggtactc 10965985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 113 - 158
Target Start/End: Original strand, 8376019 - 8376064
Alignment:
Q  113 agggaacttctacggtacacccgcaaattaaggtgtaccggtactc 158  Q
    |||| ||||||||||||||||| |||||||||||||| || |||||    
T  8376019 aggggacttctacggtacacccacaaattaaggtgtatcgatactc 8376064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 116 - 214
Target Start/End: Complemental strand, 16893302 - 16893204
Alignment:
Q  116 gaacttctacggtacacc-cgcaaattaaggtgtaccggtactctcgctt-acatttttataaattaactatcattttttatgaaagaaataggtatttg 213  Q
    ||||||||| |||||||| | |||||| |||||||||||||||||| ||| | |  ||||||||||||| ||  | |||||| ||| |||||||||||||    
T  16893302 gaacttctatggtacacctcacaaattgaggtgtaccggtactctcacttcataaatttataaattaacgat--tgttttattaaataaataggtatttg 16893205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 108; Significance: 2e-54; HSPs: 68)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 114 - 229
Target Start/End: Complemental strand, 37499148 - 37499033
Alignment:
Q  114 gggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgcttacatttttataaattaactatcattttttatgaaagaaataggtatttg 213  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  37499148 gggaacttctatggtacacccgcaaattaaggtgtaccggtactctcgcttacatttttataaattaactatcattttttatgaaagaaataggtgtttg 37499049  T
Q  214 ttgacatatatatttt 229  Q
    ||||||||||||||||    
T  37499048 ttgacatatatatttt 37499033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 123 - 229
Target Start/End: Complemental strand, 28494167 - 28494061
Alignment:
Q  123 tacggtacacccgcaaattaaggtgtaccggtactctcgcttacatttttataaattaactatcattttttatgaaagaaataggtatttgttgacatat 222  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  28494167 tacggtacacccgcaaattaaggtgtaccggtactcttgcttacatttttataaattaactatcattttttatgaaagaaataggtgtttgttgacatat 28494068  T
Q  223 atatttt 229  Q
    |||||||    
T  28494067 atatttt 28494061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 113 - 229
Target Start/End: Complemental strand, 23057108 - 23056990
Alignment:
Q  113 agggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgcttac-atttttataaattaactatcattttttatgaaag-aaataggtat 210  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||| |||||||| |    
T  23057108 agggaacttctacggtacacccgcaaattaaggtgtaccggtcctctcgcttacaatttttataaattaactatcattttttatgaaagaaaataggtgt 23057009  T
Q  211 ttgttgacatatatatttt 229  Q
    |||||||||||||||||||    
T  23057008 ttgttgacatatatatttt 23056990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 113 - 229
Target Start/End: Complemental strand, 23061409 - 23061291
Alignment:
Q  113 agggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgcttac-atttttataaattaactatcattttttatgaaag-aaataggtat 210  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||| |||||||| |    
T  23061409 agggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgcttacaatttttataaattaattatcattttttatgaaagaaaataggtgt 23061310  T
Q  211 ttgttgacatatatatttt 229  Q
    |||||||||||||||||||    
T  23061309 ttgttgacatatatatttt 23061291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 113 - 229
Target Start/End: Original strand, 6519986 - 6520103
Alignment:
Q  113 agggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgcttaca-tttttataaattaactatcattttttatgaaag-aaataggtat 210  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||| |    
T  6519986 agggaacttctacggtacacc-gcaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaaagaaaataggtgt 6520084  T
Q  211 ttgttgacatatatatttt 229  Q
    |||||||||||||||||||    
T  6520085 ttgttgacatatatatttt 6520103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 113 - 229
Target Start/End: Original strand, 5956525 - 5956643
Alignment:
Q  113 agggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgctta-catttttataaattaactatcattttttatgaaag-aaataggtat 210  Q
    |||||||||||||||||||||| ||||||||| ||||||||||||||||||||  |||||||||||||||||||||||||||||||||| |||||||| |    
T  5956525 agggaacttctacggtacacccacaaattaagctgtaccggtactctcgcttataatttttataaattaactatcattttttatgaaagaaaataggtgt 5956624  T
Q  211 ttgttgacatatatatttt 229  Q
    |||||||||||||||||||    
T  5956625 ttgttgacatatatatttt 5956643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 113 - 229
Target Start/End: Complemental strand, 35305559 - 35305441
Alignment:
Q  113 agggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgcttac-atttttataaattaactatcattttttatgaaag-aaataggtat 210  Q
    |||||||||||||||||||| || |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||| ||| |    
T  35305559 agggaacttctacggtacactcgtaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaaagaaaattggtgt 35305460  T
Q  211 ttgttgacatatatatttt 229  Q
    |||||||||||||||||||    
T  35305459 ttgttgacatatatatttt 35305441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 113 - 229
Target Start/End: Complemental strand, 18642276 - 18642159
Alignment:
Q  113 agggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgcttaca-tttttataaattaactatcattttttatgaaagaaataggtatt 211  Q
    |||| ||||||| |||||||||| |||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||| ||    
T  18642276 aggggacttctatggtacacccgtaaattacggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaaaaaaataggtgtt 18642177  T
Q  212 tgttgacatatatatttt 229  Q
    ||||||||||||||||||    
T  18642176 tgttgacatatatatttt 18642159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 114 - 229
Target Start/End: Complemental strand, 51369724 - 51369607
Alignment:
Q  114 gggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgcttac-atttttataaattaactatcattttttatgaaag-aaataggtatt 211  Q
    |||||||| ||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||| |||||||| ||    
T  51369724 gggaacttttacggtacacctgcaaattaaggtgtaccggtactctcgcttacaatttttataaattaactattattttttatgaaagaaaataggtgtt 51369625  T
Q  212 tgttgacatatatatttt 229  Q
    ||||||||||||||||||    
T  51369624 tgttgacatatatatttt 51369607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 111 - 229
Target Start/End: Original strand, 39971266 - 39971385
Alignment:
Q  111 atagggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgcttaca-tttttataaattaactatcattttttatgaaagaaataggta 209  Q
    |||||| ||||||| |||||||||| |||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||  ||||||||     
T  39971266 ataggggacttctatggtacacccgtaaattacggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaagaaaataggtt 39971365  T
Q  210 tttgttgacatatatatttt 229  Q
    ||||||||||||||||||||    
T  39971366 tttgttgacatatatatttt 39971385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 133 - 229
Target Start/End: Complemental strand, 52303400 - 52303303
Alignment:
Q  133 ccgcaaattaaggtgtaccggtactctcgcttacatttttataaattaactatcattttttatgaaag-aaataggtatttgttgacatatatatttt 229  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||    
T  52303400 ccgcaaattaaggtgtaccggtactctcacttacatttttataaattaactatcattttttatgaaagaaaataggtgtttgttgacatatatatttt 52303303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 110 - 229
Target Start/End: Complemental strand, 51985345 - 51985225
Alignment:
Q  110 aatagggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgcttac-atttttataaattaactatcattttttatgaaagaaataggt 208  Q
    |||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| ||||||||||||||||||| ||| ||||||||  ||||||||    
T  51985345 aatagggaacttctacggtacacctgcaaattacggtgtaccggtactctcgcttacaatttttataaattaactataattctttatgaagaaaataggt 51985246  T
Q  209 atttgttgacatatatatttt 229  Q
     |||||||||| |||||||||    
T  51985245 gtttgttgacaaatatatttt 51985225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 112 - 229
Target Start/End: Original strand, 921840 - 921958
Alignment:
Q  112 tagggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgcttac-atttttataaattaactatcattttttatgaaag-aaataggta 209  Q
    ||||||||||||| |||||||| ||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||| |||| |||     
T  921840 tagggaacttctatggtacacctgcaaattaaggtgtaccggtactctcg-ttacaatttttataaattaactatcattttttatgaaagaaaattggtg 921938  T
Q  210 tttgttgacatatatatttt 229  Q
    ||||||||||||||||||||    
T  921939 tttgttgacatatatatttt 921958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 115 - 229
Target Start/End: Original strand, 8461528 - 8461643
Alignment:
Q  115 ggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgcttaca-tttttataaattaactatcattttttatgaaagaaataggtatttg 213  Q
    |||||||||| ||||||||||||||||| ||||||||||||||||| |||||| |||||||||||||||||||||||||||||||  |||| ||| ||||    
T  8461528 ggaacttctatggtacacccgcaaattacggtgtaccggtactctcacttacaatttttataaattaactatcattttttatgaagaaaattggtgtttg 8461627  T
Q  214 ttgacatatatatttt 229  Q
    ||||||||||||||||    
T  8461628 ttgacatatatatttt 8461643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 118 - 229
Target Start/End: Complemental strand, 45424017 - 45423905
Alignment:
Q  118 acttctacggtacacccgcaaattaaggtgtaccggtactctcgcttaca-tttttataaattaactatcattttttatgaaagaaataggtatttgttg 216  Q
    ||||||| |||||||||| |||||| | |||||||||||||||||||||| |||||||||||||||||||||||||||||||  |||||||| |||||||    
T  45424017 acttctatggtacacccgtaaattacgatgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaagaaaataggtgtttgttg 45423918  T
Q  217 acatatatatttt 229  Q
    |||||||||||||    
T  45423917 acatatatatttt 45423905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 113 - 229
Target Start/End: Original strand, 23459548 - 23459665
Alignment:
Q  113 agggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgcttaca-tttttataaattaactatcattttttatgaaagaaataggtatt 211  Q
    |||| ||||||| |||||||||| |||||| |||||||| ||||||||||||| | |||||||||||||||||||||||||||||||  |||||||| ||    
T  23459548 aggggacttctatggtacacccgtaaattacggtgtaccagtactctcgcttataatttttataaattaactatcattttttatgaagaaaataggtgtt 23459647  T
Q  212 tgttgacatatatatttt 229  Q
    ||||||||||||||||||    
T  23459648 tgttgacatatatatttt 23459665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 113 - 229
Target Start/End: Original strand, 39190562 - 39190679
Alignment:
Q  113 agggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgcttaca-tttttataaattaactatcattttttatgaaagaaataggtatt 211  Q
    |||| ||||||| |||||||| | |||||| |||||||||||||||||||||| | |||||||||||||||||||||||||||||||  |||||||| ||    
T  39190562 aggggacttctatggtacaccagtaaattacggtgtaccggtactctcgcttataatttttataaattaactatcattttttatgaagaaaataggtgtt 39190661  T
Q  212 tgttgacatatatatttt 229  Q
    ||||||||||||||||||    
T  39190662 tgttgacatatatatttt 39190679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 110 - 229
Target Start/End: Original strand, 46770727 - 46770847
Alignment:
Q  110 aatagggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgcttaca-tttttataaattaactatcattttttatgaaagaaataggt 208  Q
    ||||||| | ||||| |||||||||| |||||| ||| ||||||||||||| |||||| |||||||||||||||||||||||||||||||  ||||||||    
T  46770727 aataggggatttctatggtacacccgtaaattacggtctaccggtactctcacttacaatttttataaattaactatcattttttatgaagaaaataggt 46770826  T
Q  209 atttgttgacatatatatttt 229  Q
     ||||||||||||||||||||    
T  46770827 gtttgttgacatatatatttt 46770847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 118 - 229
Target Start/End: Complemental strand, 45673719 - 45673607
Alignment:
Q  118 acttctacggtacacccgcaaattaaggtgtaccggtactctcgcttaca-tttttataaattaactatcattttttatgaaagaaataggtatttgttg 216  Q
    ||||||| |||||| ||| |||||| |||||||||||||||||||||||| ||||||||| |||||||||||||||||||||  |||||||| |||||||    
T  45673719 acttctatggtacatccgtaaattacggtgtaccggtactctcgcttacaatttttataagttaactatcattttttatgaagaaaataggtgtttgttg 45673620  T
Q  217 acatatatatttt 229  Q
    ||| |||||||||    
T  45673619 acaaatatatttt 45673607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 118 - 229
Target Start/End: Complemental strand, 51520216 - 51520104
Alignment:
Q  118 acttctacggtacacccgcaaattaaggtgtaccggtactctcgcttaca-tttttataaattaactatcattttttatgaaagaaataggtatttgttg 216  Q
    ||||||| |||||||||| |||||| || |||||||||||||| ||| || |||||||||||||||||||||||||||||||  |||||||| |||||||    
T  51520216 acttctatggtacacccgtaaattacggggtaccggtactctcactttcaatttttataaattaactatcattttttatgaagaaaataggtgtttgttg 51520117  T
Q  217 acatatatatttt 229  Q
    |||||||||||||    
T  51520116 acatatatatttt 51520104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 137 - 229
Target Start/End: Complemental strand, 50905962 - 50905869
Alignment:
Q  137 aaattaaggtgtaccggtactctcgcttaca-tttttataaattaactatcattttttatgaaagaaataggtatttgttgacatatatatttt 229  Q
    |||||| |||||||||||||||||||||||| |||||||||||||| ||| ||||||||||||  |||||||| ||||||||||||||||||||    
T  50905962 aaattacggtgtaccggtactctcgcttacaatttttataaattaaatataattttttatgaagaaaataggtgtttgttgacatatatatttt 50905869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 120 - 229
Target Start/End: Original strand, 38262140 - 38262249
Alignment:
Q  120 ttctacggtacacccgcaaattaaggtgtaccggtactctcgcttaca-tttttataaattaactatcattttttatgaaagaaataggtatttgttgac 218  Q
    ||||| |||||||||| | |||| |||||| || |||||||||||||| |||||||||||||| ||||||||||||||||  |||||||| |||||||||    
T  38262140 ttctatggtacacccgtagattacggtgtatcg-tactctcgcttacaatttttataaattaattatcattttttatgaagaaaataggtgtttgttgac 38262238  T
Q  219 atatatatttt 229  Q
    |||||||||||    
T  38262239 atatatatttt 38262249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 115 - 229
Target Start/End: Original strand, 26102474 - 26102589
Alignment:
Q  115 ggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgcttac-atttttataaattaactatcattttttatgaaagaaataggtatttg 213  Q
    |||||||||||||||||||   |||||| ||||||||| || ||||  |||| ||||||||||||||||||| ||||||||||||  |||||||| |||     
T  26102474 ggaacttctacggtacacctctaaattacggtgtaccgatattctcatttacgatttttataaattaactataattttttatgaagaaaataggtgtttc 26102573  T
Q  214 ttgacatatatatttt 229  Q
    ||||||||||||||||    
T  26102574 ttgacatatatatttt 26102589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 111 - 229
Target Start/End: Original strand, 50239274 - 50239392
Alignment:
Q  111 atagggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgctt-acatttttataaattaactatcattttttatgaaagaaataggta 209  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||  ||| | |  |||||||||||||||||| ||||||||||| ||| |  ||    
T  50239274 atagggaacttctacggtacacccgcaaattaaggtgtaccggtactcttacttcaaaaatttataaattaactatca-tttttatgaaataaaaaaata 50239372  T
Q  210 tttgttgacatatatatttt 229  Q
    ||| |||| || ||||||||    
T  50239373 tttattgatatttatatttt 50239392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 131 - 229
Target Start/End: Complemental strand, 43306921 - 43306823
Alignment:
Q  131 acccgcaaattaaggtgtaccggtactctcgcttac-atttttataaattaactatcattttttatgaaagaaataggtatttgttgacatatatatttt 229  Q
    ||||| |||||| |||||||||||||||||| |||| ||||||||||||||||||| | ||||||||||  |||||||  ||||||||||||||||||||    
T  43306921 acccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactat-aatttttatgaagaaaataggcgtttgttgacatatatatttt 43306823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 116 - 228
Target Start/End: Original strand, 34038163 - 34038276
Alignment:
Q  116 gaacttctacggtacacccgcaaattaaggtgtaccggtactctcgctt-acatttttataaattaactatcattttttatgaaagaaataggtatttgt 214  Q
    ||||||||||||||||| | |||| | ||||||||||||||||  |||| | | |||||||||||||| |||||||||||||||| |||||| |||||||    
T  34038163 gaacttctacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttataaattaacgatcattttttatgaaataaatagttatttgt 34038262  T
Q  215 tgacatatatattt 228  Q
    | | || |||||||    
T  34038263 taatatttatattt 34038276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 111 - 226
Target Start/End: Complemental strand, 51184448 - 51184333
Alignment:
Q  111 atagggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgctt-acatttttataaattaactatcattttttatgaaagaaataggta 209  Q
    |||||||||||||| ||||||||| ||| ||||||||| ||||||||||  ||| | |  ||||||||||||||||||| |||||||||| ||| || ||    
T  51184448 atagggaacttctatggtacacccacaatttaaggtgtgccggtactcttacttcaaaaatttataaattaactatcat-ttttatgaaataaaaagtta 51184350  T
Q  210 tttgttgacatatatat 226  Q
    |||||||| ||||||||    
T  51184349 tttgttgatatatatat 51184333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 112 - 214
Target Start/End: Original strand, 12105158 - 12105261
Alignment:
Q  112 tagggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgctt-acatttttataaattaactatcattttttatgaaagaaataggtat 210  Q
    ||||||||||||||||||||| | |||| | ||||||||||||||||| |||| | | |||||||||||||| || |||||||||| || |||||| |||    
T  12105158 tagggaacttctacggtacactcacaaaatgaggtgtaccggtactcttgcttcataattttataaattaacgataattttttatgtaataaatagttat 12105257  T
Q  211 ttgt 214  Q
    ||||    
T  12105258 ttgt 12105261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 115 - 158
Target Start/End: Original strand, 26010943 - 26010986
Alignment:
Q  115 ggaacttctacggtacacccgcaaattaaggtgtaccggtactc 158  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  26010943 ggaacttctacggtacacccgcaaattaaggtgtaccggtactc 26010986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 115 - 158
Target Start/End: Original strand, 51977859 - 51977902
Alignment:
Q  115 ggaacttctacggtacacccgcaaattaaggtgtaccggtactc 158  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  51977859 ggaacttctacggtacacccgcaaattaaggtgtaccggtactc 51977902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 112 - 229
Target Start/End: Complemental strand, 24511987 - 24511870
Alignment:
Q  112 tagggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgctt-acatttttataaattaactatcattttttatgaaagaaataggtat 210  Q
    ||||||| ||||||||||||| || ||||| ||||||||||||||||| |||| | |  |||||||| |||| ||||  |||||||||| |||||| |||    
T  24511987 tagggaatttctacggtacactcgtaaattgaggtgtaccggtactcttgcttcataaatttataaactaacgatca-attttatgaaataaatagttat 24511889  T
Q  211 ttgttgacatatatatttt 229  Q
    |||||| ||| ||||||||    
T  24511888 ttgttggcatttatatttt 24511870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 113 - 205
Target Start/End: Original strand, 52345598 - 52345691
Alignment:
Q  113 agggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgctt-acatttttataaattaactatcattttttatgaaagaaata 205  Q
    |||||||||||||||||||| | |||| | ||||||||||||||||| | || | | |||||||||||||| |||||||||| ||||| |||||    
T  52345598 agggaacttctacggtacactcacaaagtgaggtgtaccggtactcttgtttcataattttataaattaacgatcattttttgtgaaataaata 52345691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 114 - 217
Target Start/End: Complemental strand, 7122361 - 7122258
Alignment:
Q  114 gggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgctt-acatttttataaattaactatcattttttatgaaagaaataggtattt 212  Q
    |||||||||||| |||||||| ||| |||| |||||||||||||||  ||| | |  |||||||||||||||||| ||||||||||| ||| || |||||    
T  7122361 gggaacttctacagtacacccacaatttaaagtgtaccggtactcttacttcaaaaatttataaattaactatca-tttttatgaaataaaaagttattt 7122263  T
Q  213 gttga 217  Q
    |||||    
T  7122262 gttga 7122258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 114 - 229
Target Start/End: Original strand, 25702435 - 25702551
Alignment:
Q  114 gggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgctt-acatttttataaattaactatcattttttatgaaagaaataggtattt 212  Q
    ||||||||||||||||||| |  ||||| ||||||||||||||||| |||| | | |||||||||| ||| |||||||||| | ||| |||||  |||||    
T  25702435 gggaacttctacggtacactcataaattgaggtgtaccggtactcttgcttcataattttataaatcaacgatcattttttgtaaaataaataactattt 25702534  T
Q  213 gttgacatatatatttt 229  Q
    ||  |||| ||||||||    
T  25702535 gtcaacatttatatttt 25702551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 169 - 228
Target Start/End: Complemental strand, 16482926 - 16482867
Alignment:
Q  169 ttttataaattaactatcattttttatgaaagaaataggtatttgttgacatatatattt 228  Q
    ||||||||||||||||| ||||||||||||  |||||||| |||||||||||||| ||||    
T  16482926 ttttataaattaactataattttttatgaagaaaataggtgtttgttgacatatagattt 16482867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 117 - 215
Target Start/End: Original strand, 42275338 - 42275437
Alignment:
Q  117 aacttctacggtacacccgcaaattaaggtgtaccggtactctcgctt-acatttttataaattaactatcattttttatgaaagaaataggtatttgtt 215  Q
    |||||||| ||||||| |  ||| | ||||||||||||||||  |||| | | |||||||||||||| |||||||||||||||| |||||| ||||||||    
T  42275338 aacttctaaggtacactcagaaagtgaggtgtaccggtactcatgcttcataattttataaattaacgatcattttttatgaaataaatagttatttgtt 42275437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 116 - 217
Target Start/End: Complemental strand, 2247449 - 2247348
Alignment:
Q  116 gaacttctacggtacacccgcaaattaaggtgtaccggtactctcgc-ttacatttttataaattaactatcattttttatgaaagaaataggtatttgt 214  Q
    ||||||||||||||||||| |||||||||||||||||||||| |  | ||| |  | |||| ||||||||||| ||||||||||| ||| || |||||||    
T  2247449 gaacttctacggtacacccacaaattaaggtgtaccggtactttaactttaaaaatctatatattaactatca-tttttatgaaataaagagctatttgt 2247351  T
Q  215 tga 217  Q
    |||    
T  2247350 tga 2247348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 113 - 229
Target Start/End: Complemental strand, 38261210 - 38261094
Alignment:
Q  113 agggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgctt-acatttttataaattaactatcattttttatgaaagaaataggtatt 211  Q
    |||||||||||||||||||| |  ||| | ||||||||||||||||  |||| | | |||||||| ||||| ||||||||||||| || |||||| ||||    
T  38261210 agggaacttctacggtacactcataaagtgaggtgtaccggtactcctgcttcataattttataa-ttaacgatcattttttatgtaataaatagctatt 38261112  T
Q  212 tgttgacatatatatttt 229  Q
    |||  |||| ||||||||    
T  38261111 tgtcaacatttatatttt 38261094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 114 - 214
Target Start/End: Complemental strand, 46641923 - 46641822
Alignment:
Q  114 gggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgctt-acatttttataaattaactatcattttttatgaaagaaataggtattt 212  Q
    ||||||||||||||||||| |||||| | ||||||||||||||||  ||||   | |||||||||| ||| ||||||||||||| |  |||||| |||||    
T  46641923 gggaacttctacggtacactcgcaaaatgaggtgtaccggtactcctgcttcttaattttataaatgaacgatcattttttatgtagtaaatagctattt 46641824  T
Q  213 gt 214  Q
    ||    
T  46641823 gt 46641822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 112 - 156
Target Start/End: Complemental strand, 2621087 - 2621043
Alignment:
Q  112 tagggaacttctacggtacacccgcaaattaaggtgtaccggtac 156  Q
    |||||||||||||||||||||| ||||||||||||||| ||||||    
T  2621087 tagggaacttctacggtacacctgcaaattaaggtgtatcggtac 2621043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 114 - 229
Target Start/End: Complemental strand, 12179005 - 12178890
Alignment:
Q  114 gggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgcttac-atttttataaattaactatcattttttatgaaagaaataggtattt 212  Q
    |||||||| |||||||||| |||||||| ||||||||||||||||| |||| | |  | ||||||||||| || |  |||||||||| |||||| |||||    
T  12179005 gggaacttttacggtacactcgcaaattgaggtgtaccggtactcttgcttcctaaatctataaattaacgatta-attttatgaaataaatagttattt 12178907  T
Q  213 gttgacatatatatttt 229  Q
    |  ||||| ||||||||    
T  12178906 gccgacatttatatttt 12178890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 114 - 158
Target Start/End: Complemental strand, 33910096 - 33910052
Alignment:
Q  114 gggaacttctacggtacacccgcaaattaaggtgtaccggtactc 158  Q
    ||||| ||||||||||||||| |||||||||||||||||||||||    
T  33910096 gggaatttctacggtacacccacaaattaaggtgtaccggtactc 33910052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 112 - 214
Target Start/End: Original strand, 24230567 - 24230670
Alignment:
Q  112 tagggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgctt-acatttttataaattaactatcattttttatgaaagaaataggtat 210  Q
    ||||||||||||||||||||| | |||| | |||||||  |||||||  |||| | | |||||||||||||| || |||||||||| || |||||| |||    
T  24230567 tagggaacttctacggtacactcacaaagtgaggtgtaatggtactcctgcttcataattttataaattaacgataattttttatgtaataaatagctat 24230666  T
Q  211 ttgt 214  Q
    ||||    
T  24230667 ttgt 24230670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 114 - 214
Target Start/End: Original strand, 14152687 - 14152789
Alignment:
Q  114 gggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgctt-acatttttataaattaactatca-ttttttatgaaagaaataggtatt 211  Q
    |||||||||||||||| || | |||| |||||| |||||||||||| |||| | | |||||||||||||| || | ||||||||| || |||||| ||||    
T  14152687 gggaacttctacggtatactcacaaaataaggtataccggtactcttgcttaataattttataaattaacaataatttttttatgtaataaatagctatt 14152786  T
Q  212 tgt 214  Q
    |||    
T  14152787 tgt 14152789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 116 - 229
Target Start/End: Complemental strand, 30548014 - 30547901
Alignment:
Q  116 gaacttctacggtacacccgcaaattaaggtgtaccggtactctcgctt-acatttttataaattaactatcattttttatgaaagaaataggtatttgt 214  Q
    ||||||||||||||||| || ||||| |||||||| |||||||| |||| | |  | |||||| |||| ||||  |||||||||| |||||| |||||||    
T  30548014 gaacttctacggtacactcgtaaattgaggtgtacaggtactcttgcttcataaatctataaactaacgatca-attttatgaaataaatagttatttgt 30547916  T
Q  215 tgacatatatatttt 229  Q
     ||||| ||||||||    
T  30547915 cgacatttatatttt 30547901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 113 - 229
Target Start/End: Complemental strand, 9588051 - 9587934
Alignment:
Q  113 agggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgctt-acatttttataaattaactatcattttttatgaaagaaataggtatt 211  Q
    |||||||||||||||||||| |  ||| | |||| |||||||||||  |||| | | |||||||||||||  || || |||||||||| |||||| ||||    
T  9588051 agggaacttctacggtacactcataaagtgaggtataccggtactcctgcttcataattttataaattaatgattatcttttatgaaataaatagctatt 9587952  T
Q  212 tgttgacatatatatttt 229  Q
    |||| | || ||||||||    
T  9587951 tgttaatatttatatttt 9587934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 157 - 229
Target Start/End: Original strand, 29106408 - 29106480
Alignment:
Q  157 tctcgcttaca-tttttataaattaactatcattttttatgaaagaaataggtatttgttgacatatatatttt 229  Q
    ||||||||||| |||||||||||||||||| ||||||||||||  ||||| || |||||||| || ||||||||    
T  29106408 tctcgcttacaatttttataaattaactat-attttttatgaagaaaatatgtgtttgttgatatgtatatttt 29106480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 113 - 205
Target Start/End: Original strand, 48976874 - 48976967
Alignment:
Q  113 agggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgctt-acatttttataaattaactatcattttttatgaaagaaata 205  Q
    ||||||||||||||| |||| | |||| | ||||||| ||||||||  |||| | | |||||||||||||| ||||||||||||| || |||||    
T  48976874 agggaacttctacggcacactcacaaagtgaggtgtatcggtactcctgcttcataattttataaattaacgatcattttttatgtaataaata 48976967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 114 - 205
Target Start/End: Original strand, 6526428 - 6526520
Alignment:
Q  114 gggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgctt-acatttttataaattaactatcattttttatgaaagaaata 205  Q
    ||||| ||||||||||||| | |||| | |||||||||| |||||||| || | | ||| | |||||||| ||||||||||||| ||||||||    
T  6526428 gggaatttctacggtacactcacaaagtgaggtgtaccgatactctcgtttcataatttcacaaattaacgatcattttttatgtaagaaata 6526520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 114 - 158
Target Start/End: Complemental strand, 35910569 - 35910525
Alignment:
Q  114 gggaacttctacggtacacccgcaaattaaggtgtaccggtactc 158  Q
    |||||||||||||||||||||| ||||||| ||||| ||||||||    
T  35910569 gggaacttctacggtacacccgtaaattaaagtgtatcggtactc 35910525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 111 - 158
Target Start/End: Complemental strand, 40054997 - 40054949
Alignment:
Q  111 atagggaacttctacggtacacc-cgcaaattaaggtgtaccggtactc 158  Q
    ||||||||||||||||||||||| | |||||| ||||||||||||||||    
T  40054997 atagggaacttctacggtacacctcacaaattgaggtgtaccggtactc 40054949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 114 - 157
Target Start/End: Original strand, 632648 - 632691
Alignment:
Q  114 gggaacttctacggtacacccgcaaattaaggtgtaccggtact 157  Q
    |||||||||||||| ||||||||||||||||||| |||| ||||    
T  632648 gggaacttctacggcacacccgcaaattaaggtgaaccgatact 632691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 116 - 206
Target Start/End: Complemental strand, 24381724 - 24381633
Alignment:
Q  116 gaacttctacggtacacccgcaaattaaggtgtaccggtactctcgctt-acatttttataaattaactatcattttttatgaaagaaatag 206  Q
    ||||||||||||||||| | ||||   | ||||||||||||||||| || | | |||||||||||||| ||||||||| | | |||||||||    
T  24381724 gaacttctacggtacactcacaaagcgaagtgtaccggtactctcgtttcataattttataaattaacgatcatttttcaagtaagaaatag 24381633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 114 - 212
Target Start/End: Original strand, 30320890 - 30320989
Alignment:
Q  114 gggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgctt-acatttttataaattaactatcattttttatgaaagaaataggtattt 212  Q
    ||||||||||||||||||| || ||| |||||||||||| |||||  ||||   | |||||||||| ||| || |||||||||| || |||||| |||||    
T  30320890 gggaacttctacggtacactcgtaaaataaggtgtaccgatactcctgcttcttaattttataaatgaacgataattttttatgtaataaatagctattt 30320989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 127 - 158
Target Start/End: Original strand, 42316848 - 42316879
Alignment:
Q  127 gtacacccgcaaattaaggtgtaccggtactc 158  Q
    ||||||||||||||||||||||||||||||||    
T  42316848 gtacacccgcaaattaaggtgtaccggtactc 42316879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 116 - 214
Target Start/End: Complemental strand, 52180637 - 52180538
Alignment:
Q  116 gaacttctacggtacacccgcaaattaaggtgtaccggtactctcgctt-acatttttataaattaactatcattttttatgaaagaaataggtatttgt 214  Q
    ||||||||| |||| || | |||| | ||||||||||||||||  |||| | | |||||||||||||| || |||||||||| || |||||| |||||||    
T  52180637 gaacttctatggtatactcacaaagtgaggtgtaccggtactcctgcttcataattttataaattaacgataattttttatgtaataaatagctatttgt 52180538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 149
Target Start/End: Original strand, 33098706 - 33098740
Alignment:
Q  115 ggaacttctacggtacacccgcaaattaaggtgta 149  Q
    |||||||||||||||||||| ||||||||||||||    
T  33098706 ggaacttctacggtacacccacaaattaaggtgta 33098740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 169 - 206
Target Start/End: Original strand, 477498 - 477535
Alignment:
Q  169 ttttataaattaactatcattttttatgaaagaaatag 206  Q
    |||||||||||||| |||||||||||||||| ||||||    
T  477498 ttttataaattaacgatcattttttatgaaataaatag 477535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 169 - 214
Target Start/End: Original strand, 6329304 - 6329349
Alignment:
Q  169 ttttataaattaactatcattttttatgaaagaaataggtatttgt 214  Q
    |||||||||||||| ||||||||||||| || |||||| |||||||    
T  6329304 ttttataaattaacgatcattttttatgtaataaatagctatttgt 6329349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 114 - 158
Target Start/End: Original strand, 43916346 - 43916391
Alignment:
Q  114 gggaacttctacggtacacc-cgcaaattaaggtgtaccggtactc 158  Q
    |||||||||||||||||||| | |||||| ||||||||||||||||    
T  43916346 gggaacttctacggtacacctcacaaattgaggtgtaccggtactc 43916391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 113 - 205
Target Start/End: Complemental strand, 46235239 - 46235146
Alignment:
Q  113 agggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgctt-acatttttataaattaactatcattttttatgaaagaaata 205  Q
    ||||||||||||||||||||   |||| | |||||||| ||||| ||  ||| | | |||||||||||||| || ||||||||||||| |||||    
T  46235239 agggaacttctacggtacacttacaaaatgaggtgtactggtaccctttcttcataattttataaattaacgataattttttatgaaataaata 46235146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 169 - 214
Target Start/End: Original strand, 46362079 - 46362124
Alignment:
Q  169 ttttataaattaactatcattttttatgaaagaaataggtatttgt 214  Q
    |||||||||||||| |||||||||||||||| |||||  |||||||    
T  46362079 ttttataaattaacgatcattttttatgaaataaataactatttgt 46362124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 114 - 214
Target Start/End: Original strand, 51610536 - 51610636
Alignment:
Q  114 gggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgctt-acatttttataaattaactatcattttttatgaaagaaataggtattt 212  Q
    ||||||||||||||||||  || ||||| ||||||| ||||||||| |||| | |  |||||||| |||| ||||  |||||||||| |||||| |||||    
T  51610536 gggaacttctacggtacattcgtaaattgaggtgtatcggtactcttgcttcataaatttataaactaacaatca-attttatgaaataaatagttattt 51610634  T
Q  213 gt 214  Q
    ||    
T  51610635 gt 51610636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 169 - 214
Target Start/End: Original strand, 52441133 - 52441178
Alignment:
Q  169 ttttataaattaactatcattttttatgaaagaaataggtatttgt 214  Q
    |||||||||||||| ||||||||||||| || |||||| |||||||    
T  52441133 ttttataaattaacgatcattttttatgtaataaatagttatttgt 52441178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 169 - 205
Target Start/End: Original strand, 7227626 - 7227662
Alignment:
Q  169 ttttataaattaactatcattttttatgaaagaaata 205  Q
    |||||||||||||| |||||||||||||||| |||||    
T  7227626 ttttataaattaacgatcattttttatgaaataaata 7227662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 169 - 205
Target Start/End: Original strand, 17553872 - 17553908
Alignment:
Q  169 ttttataaattaactatcattttttatgaaagaaata 205  Q
    |||||||||||||| |||||||||||||||| |||||    
T  17553872 ttttataaattaacgatcattttttatgaaataaata 17553908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 169 - 229
Target Start/End: Complemental strand, 21073115 - 21073055
Alignment:
Q  169 ttttataaattaactatcattttttatgaaagaaataggtatttgttgacatatatatttt 229  Q
    |||||||||||||| ||||||||||||| || |||||| ||||| || | || ||||||||    
T  21073115 ttttataaattaacgatcattttttatgtaataaatagctattttttaatatttatatttt 21073055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 111 - 158
Target Start/End: Original strand, 51004787 - 51004835
Alignment:
Q  111 atagggaacttctacggtacacc-cgcaaattaaggtgtaccggtactc 158  Q
    |||||||| |||||||||||||| | |||||| ||||||||||||||||    
T  51004787 atagggaatttctacggtacacctcacaaattgaggtgtaccggtactc 51004835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 100; Significance: 1e-49; HSPs: 64)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 114 - 229
Target Start/End: Complemental strand, 11140651 - 11140536
Alignment:
Q  114 gggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgcttacatttttataaattaactatcattttttatgaaagaaataggtatttg 213  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||| |||||||||||| ||||    
T  11140651 gggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgcttacatttttataaacaaactatcattttttataaaagaaataggtgtttg 11140552  T
Q  214 ttgacatatatatttt 229  Q
    ||||||||||||||||    
T  11140551 ttgacatatatatttt 11140536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 113 - 229
Target Start/End: Complemental strand, 44366016 - 44365899
Alignment:
Q  113 agggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgcttacatttttataaattaactatcatt-ttttatgaaagaaataggtatt 211  Q
    |||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||    
T  44366016 agggaacttctatggtacacccgtaaattaaggtgtaccggtactctcgcttacatttttataaattaactatcatttttttatgaaagaaataggtgtt 44365917  T
Q  212 tgttgacatatatatttt 229  Q
    ||||||||||||||||||    
T  44365916 tgttgacatatatatttt 44365899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 115 - 229
Target Start/End: Complemental strand, 42067984 - 42067868
Alignment:
Q  115 ggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgcttac-atttttataaattaactatcattttttatgaaag-aaataggtattt 212  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||| ||| |||    
T  42067984 ggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaaagaaaattggtgttt 42067885  T
Q  213 gttgacatatatatttt 229  Q
    |||||||||||||||||    
T  42067884 gttgacatatatatttt 42067868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 115 - 229
Target Start/End: Original strand, 44670260 - 44670374
Alignment:
Q  115 ggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgcttacatttttataaattaactatcattttttatgaaagaaataggtatttgt 214  Q
    ||||||||||||||||| ||| |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| || |||||    
T  44670260 ggaacttctacggtacatccgtaaattaaggtgtgccggtactttcgcttacatttttataaattaactatcattttttatgaaagaaataagtgtttgt 44670359  T
Q  215 tgacatatatatttt 229  Q
    |||||||||||||||    
T  44670360 tgacatatatatttt 44670374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 114 - 229
Target Start/End: Original strand, 29786533 - 29786650
Alignment:
Q  114 gggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgcttac-atttttataaattaactatcattttttatgaaag-aaataggtatt 211  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||| || ||    
T  29786533 gggaacttctacggtacacctgcaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaaagaaaataagtgtt 29786632  T
Q  212 tgttgacatatatatttt 229  Q
    ||||||||||||||||||    
T  29786633 tgttgacatatatatttt 29786650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 11 - 113
Target Start/End: Original strand, 30214926 - 30215028
Alignment:
Q  11 tgatctccttcaaaccatagcgagctggtaatattcttttccttctgctggcttgaatttcaagtcttgcgaagttgaggttgaacaataatcattaaca 110  Q
    |||||||||||||||||||| ||| ||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30214926 tgatctccttcaaaccatagtgagttggtaatattcttttccttttgctagcttgaatttcaagtcttgcgaagttgaggttgaacaataatcattaaca 30215025  T
Q  111 ata 113  Q
    |||    
T  30215026 ata 30215028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 113 - 229
Target Start/End: Original strand, 42363927 - 42364044
Alignment:
Q  113 agggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgcttaca-tttttataaattaactatcattttttatgaaagaaataggtatt 211  Q
    ||||||||||||||||||||| |||||||| |||||| ||||||||| ||||||| ||||||||| |||||||| ||||||||||||| |||||||| ||    
T  42363927 agggaacttctacggtacacctgcaaattacggtgtatcggtactctagcttacaatttttataatttaactataattttttatgaaaaaaataggtgtt 42364026  T
Q  212 tgttgacatatatatttt 229  Q
    ||||||||||||||||||    
T  42364027 tgttgacatatatatttt 42364044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 113 - 229
Target Start/End: Complemental strand, 46959959 - 46959842
Alignment:
Q  113 agggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgcttacat-ttttataaattaactatcattttttatgaaagaaataggtatt 211  Q
    ||||||||| ||||||||||| |||||||| |||||| |||||||||||||||||  ||||||||||||||||||||||||||||||  |||||||| ||    
T  46959959 agggaacttttacggtacacctgcaaattacggtgtatcggtactctcgcttacaacttttataaattaactatcattttttatgaagaaaataggtgtt 46959860  T
Q  212 tgttgacatatatatttt 229  Q
    ||||||||||||||||||    
T  46959859 tgttgacatatatatttt 46959842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 118 - 229
Target Start/End: Original strand, 47948396 - 47948508
Alignment:
Q  118 acttctacggtacacccgcaaattaaggtgtaccggtactctcgcttaca-tttttataaattaactatcattttttatgaaagaaataggtatttgttg 216  Q
    ||||||| |||||||||| |||| | |||||||||||||||||||||||| |||||||||||||||||||||||||||||||  |||||||| |||||||    
T  47948396 acttctatggtacacccgtaaatgacggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaagaaaataggtgtttgttg 47948495  T
Q  217 acatatatatttt 229  Q
    |||||||||||||    
T  47948496 acatatatatttt 47948508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 120 - 229
Target Start/End: Original strand, 35171197 - 35171307
Alignment:
Q  120 ttctacggtacacccgcaaattaaggtgtaccggtactctcgcttaca-tttttataaattaactatcattttttatgaaagaaataggtatttgttgac 218  Q
    ||||| |||||||||| |||||| |||||||||||||||||||||| | |||||||||||||||||||||||||||||||  |||||||| |||||||||    
T  35171197 ttctatggtacacccgtaaattacggtgtaccggtactctcgcttataatttttataaattaactatcattttttatgaagaaaataggtgtttgttgac 35171296  T
Q  219 atatatatttt 229  Q
    |||||||||||    
T  35171297 atatatatttt 35171307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 114 - 229
Target Start/End: Original strand, 38785082 - 38785198
Alignment:
Q  114 gggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgcttaca--tttttataaattaactatcattttttatgaaagaaataggtatt 211  Q
    |||||||||||||||||||| |||||||| ||||||||||||||||||||||||  |||||||||||||||||| | ||||||||||  |||||||| ||    
T  38785082 gggaacttctacggtacacctgcaaattacggtgtaccggtactctcgcttacaattttttataaattaactat-aatttttatgaagaaaataggtgtt 38785180  T
Q  212 tgttgacatatatatttt 229  Q
    ||||||||||||||||||    
T  38785181 tgttgacatatatatttt 38785198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 113 - 229
Target Start/End: Original strand, 876221 - 876338
Alignment:
Q  113 agggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgcttaca-tttttataaattaactatcattttttatgaaagaaataggtatt 211  Q
    |||||||||||||||||||||||||||||| | ||||| |||||||||||||| | ||||||||| |||||||||||||||||||||  |||||| | ||    
T  876221 agggaacttctacggtacacccgcaaattacgatgtactggtactctcgcttataatttttataatttaactatcattttttatgaagaaaatagttgtt 876320  T
Q  212 tgttgacatatatatttt 229  Q
    ||||||||||||||||||    
T  876321 tgttgacatatatatttt 876338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 118 - 229
Target Start/End: Complemental strand, 40650473 - 40650361
Alignment:
Q  118 acttctacggtacacccgcaaattaaggtgtaccggtactctcgcttaca-tttttataaattaactatcattttttatgaaagaaataggtatttgttg 216  Q
    ||||||| ||||||| || |||||| |||||| ||||||||||||||||| |||||||||||||||||||||||||||||||  |||||||| |||||||    
T  40650473 acttctatggtacactcgtaaattacggtgtatcggtactctcgcttacaatttttataaattaactatcattttttatgaagaaaataggtgtttgttg 40650374  T
Q  217 acatatatatttt 229  Q
    |||||||||||||    
T  40650373 acatatatatttt 40650361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 113 - 229
Target Start/End: Complemental strand, 45636496 - 45636378
Alignment:
Q  113 agggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgcttaca-tttttataaattaactatcattttttatgaaag-aaataggtat 210  Q
    |||||||||||||||||||| || |||||||  | ||| ||||| |||||||| | ||||||||||||||||||||||||||||||||| ||||||||||    
T  45636496 agggaacttctacggtacactcgtaaattaaaatatactggtacactcgcttataatttttataaattaactatcattttttatgaaagaaaataggtat 45636397  T
Q  211 ttgttgacatatatatttt 229  Q
    |||||||||||||||||||    
T  45636396 ttgttgacatatatatttt 45636378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 118 - 229
Target Start/End: Original strand, 42848194 - 42848306
Alignment:
Q  118 acttctacggtacacccgcaaattaaggtgtaccggtactctcgcttaca-tttttataaattaactatcattttttatgaaagaaataggtatttgttg 216  Q
    ||||||| | |||||||| |||| | ||||||||||||||| |||||||| |||||||||||||||||||||||||||||||  |||||||| |||||||    
T  42848194 acttctatgatacacccgtaaatgacggtgtaccggtactcccgcttacaatttttataaattaactatcattttttatgaagaaaataggtgtttgttg 42848293  T
Q  217 acatatatatttt 229  Q
    |||||||||||||    
T  42848294 acatatatatttt 42848306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 137 - 229
Target Start/End: Complemental strand, 31309262 - 31309169
Alignment:
Q  137 aaattaaggtgtaccggtactctcgcttaca-tttttataaattaactatcattttttatgaaagaaataggtatttgttgacatatatatttt 229  Q
    |||||| |||||||||||||||||| ||||| |||||||||||||||||| ||||||||||||  |||||||| ||||||||||||||||||||    
T  31309262 aaattacggtgtaccggtactctcggttacaatttttataaattaactataattttttatgaagaaaataggtgtttgttgacatatatatttt 31309169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 114 - 191
Target Start/End: Original strand, 29347311 - 29347389
Alignment:
Q  114 gggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgcttac-atttttataaattaactatcatttt 191  Q
    ||||||||||||||||||||||||||||   |||||||||||||||||||||| |||||||||||||||||||||||||    
T  29347311 gggaacttctacggtacacccgcaaattgcagtgtaccggtactctcgcttacaatttttataaattaactatcatttt 29347389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 114 - 188
Target Start/End: Original strand, 39629948 - 39630023
Alignment:
Q  114 gggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgcttac-atttttataaattaactatcat 188  Q
    |||||||||||||||||| |||||||||||| |||||||||||| |||||||| ||||||||||||||||||||||    
T  39629948 gggaacttctacggtacatccgcaaattaagatgtaccggtactatcgcttacaatttttataaattaactatcat 39630023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 118 - 223
Target Start/End: Original strand, 378607 - 378712
Alignment:
Q  118 acttctacggtacacccgcaaattaaggtgtaccggtactctcgcttacatttttataaattaactatcattttttatgaaagaaataggtatttgttga 217  Q
    ||||||| |||||||||| ||||||  ||||||||||||  || |||  ||||||||||||||||||||||||||||||||  ||||| || ||||||||    
T  378607 acttctatggtacacccgtaaattacagtgtaccggtaccatcactttaatttttataaattaactatcattttttatgaagaaaataagtgtttgttga 378706  T
Q  218 catata 223  Q
    ||||||    
T  378707 catata 378712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 116 - 229
Target Start/End: Original strand, 52082045 - 52082158
Alignment:
Q  116 gaacttctacggtacacccgcaaattaaggtgtaccggtactctcgctt-acatttttataaattaactatcattttttatgaaagaaataggtatttgt 214  Q
    ||||||||||||||||||||||||||||||||||||||||||||  ||| | |  ||||||||| |||||| | ||||||||||| ||| || |||||||    
T  52082045 gaacttctacggtacacccgcaaattaaggtgtaccggtactcttacttcaaaaatttataaatgaactatta-tttttatgaaataaaaagttatttgt 52082143  T
Q  215 tgacatatatatttt 229  Q
    ||| || ||||||||    
T  52082144 tgatatttatatttt 52082158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 111 - 214
Target Start/End: Original strand, 1129126 - 1129230
Alignment:
Q  111 atagggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgctt-acatttttataaattaactatcattttttatgaaagaaataggta 209  Q
    |||||||||||||||||||||| | |||| | ||||||||||||||||  |||| | | |||||||||||||| ||||||||||||| || |||||| ||    
T  1129126 atagggaacttctacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttataaattaacgatcattttttatgtaataaatagcta 1129225  T
Q  210 tttgt 214  Q
    |||||    
T  1129226 tttgt 1129230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 111 - 205
Target Start/End: Original strand, 37520699 - 37520794
Alignment:
Q  111 atagggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgctt-acatttttataaattaactatcattttttatgaaagaaata 205  Q
    |||||||||||||||||||||| | |||| | |||||||||||||||||  ||| | | |||||||||||||| |||||||||||||||| |||||    
T  37520699 atagggaacttctacggtacactcacaaaatgaggtgtaccggtactctttcttcataattttataaattaacgatcattttttatgaaataaata 37520794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 113 - 212
Target Start/End: Complemental strand, 40478165 - 40478065
Alignment:
Q  113 agggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgctt-acatttttataaattaactatcattttttatgaaagaaataggtatt 211  Q
    |||||||||||||||||||| | |||| | ||||||||||||||||  |||| | | |||||||||||||| ||||||||||||| || |||||| ||||    
T  40478165 agggaacttctacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttataaattaacgatcattttttatgtaataaatagctatt 40478066  T
Q  212 t 212  Q
    |    
T  40478065 t 40478065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 111 - 158
Target Start/End: Original strand, 4663143 - 4663190
Alignment:
Q  111 atagggaacttctacggtacacccgcaaattaaggtgtaccggtactc 158  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||    
T  4663143 atagggaacttctacggtacatccgcaaattaaggtgtaccggtactc 4663190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 114 - 165
Target Start/End: Complemental strand, 37492302 - 37492251
Alignment:
Q  114 gggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgctta 165  Q
    |||||||||||||||||| |||||||||| ||||||||||||||||||||||    
T  37492302 gggaacttctacggtacatccgcaaattacggtgtaccggtactctcgctta 37492251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 175 - 229
Target Start/End: Complemental strand, 4660099 - 4660045
Alignment:
Q  175 aaattaactatcattttttatgaaagaaataggtatttgttgacatatatatttt 229  Q
    ||||||||||||||||||||||||| |||||| | ||||||||||||||||||||    
T  4660099 aaattaactatcattttttatgaaaaaaatagctgtttgttgacatatatatttt 4660045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 113 - 214
Target Start/End: Complemental strand, 9252260 - 9252159
Alignment:
Q  113 agggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgctt-acatttttataaattaactatcattttttatgaaagaaataggtatt 211  Q
    |||||||||||||||||||| || ||||| ||||||||||||||||| |||| | || | ||||||||||| ||||  |||||||||| |||||| ||||    
T  9252260 agggaacttctacggtacactcgtaaattgaggtgtaccggtactcttgcttcatatatctataaattaacgatca-attttatgaaataaatagttatt 9252162  T
Q  212 tgt 214  Q
    |||    
T  9252161 tgt 9252159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 112 - 229
Target Start/End: Complemental strand, 42479093 - 42478975
Alignment:
Q  112 tagggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgctt-acatttttataaattaactatcattttttatgaaagaaataggtat 210  Q
    ||||||||||||||||||||  | |||| ||||||||||||||||||| | || | | |||||||||||||| || |||||||||| || |||||  |||    
T  42479093 tagggaacttctacggtacattcacaaaataaggtgtaccggtactcttgtttcataattttataaattaacgataattttttatgtaataaataactat 42478994  T
Q  211 ttgttgacatatatatttt 229  Q
    ||||| | || ||||||||    
T  42478993 ttgttaatatttatatttt 42478975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 114 - 214
Target Start/End: Original strand, 42621848 - 42621949
Alignment:
Q  114 gggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgctt-acatttttataaattaactatcattttttatgaaagaaataggtattt 212  Q
    ||||||||||||||||||| | |||| | ||||||||| ||||||| |||| | | |||||||||||||| | ||||||||||| || |||||| |||||    
T  42621848 gggaacttctacggtacactcacaaaatgaggtgtaccagtactcttgcttcataattttataaattaacgaccattttttatgtaataaatagttattt 42621947  T
Q  213 gt 214  Q
    ||    
T  42621948 gt 42621949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 114 - 158
Target Start/End: Complemental strand, 19547895 - 19547851
Alignment:
Q  114 gggaacttctacggtacacccgcaaattaaggtgtaccggtactc 158  Q
    ||||||||||||||||||||| |||||||||||||||||||||||    
T  19547895 gggaacttctacggtacacccacaaattaaggtgtaccggtactc 19547851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 113 - 164
Target Start/End: Complemental strand, 29806416 - 29806365
Alignment:
Q  113 agggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgctt 164  Q
    |||||||||||||||||||| |||||||| ||||||||||||||||| ||||    
T  29806416 agggaacttctacggtacactcgcaaattgaggtgtaccggtactcttgctt 29806365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 116 - 214
Target Start/End: Complemental strand, 47746233 - 47746134
Alignment:
Q  116 gaacttctacggtacacccgcaaattaaggtgtaccggtactctcgctt-acatttttataaattaactatcattttttatgaaagaaataggtatttgt 214  Q
    ||||||||||||||||| | |||| | |||||||||| |||||| |||| | | |||||||||||||| || |||||||||| || |||||| |||||||    
T  47746233 gaacttctacggtacactcacaaaatgaggtgtaccgatactcttgcttcataattttataaattaacgataattttttatgtaataaatagctatttgt 47746134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 113 - 158
Target Start/End: Original strand, 788472 - 788517
Alignment:
Q  113 agggaacttctacggtacacccgcaaattaaggtgtaccggtactc 158  Q
    |||||| || ||||||||||||||||||||||||||||||||||||    
T  788472 agggaatttttacggtacacccgcaaattaaggtgtaccggtactc 788517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 113 - 158
Target Start/End: Complemental strand, 27647887 - 27647842
Alignment:
Q  113 agggaacttctacggtacacccgcaaattaaggtgtaccggtactc 158  Q
    |||||||||||||||||||||||||||||||||||||  |||||||    
T  27647887 agggaacttctacggtacacccgcaaattaaggtgtattggtactc 27647842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 114 - 214
Target Start/End: Original strand, 44379414 - 44379515
Alignment:
Q  114 gggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgctt-acatttttataaattaactatcattttttatgaaagaaataggtattt 212  Q
    ||||||||||||||||||| | |||| | ||||||||||||||||  |||| | | |||||||||||||| | ||||||||||| || |||||  |||||    
T  44379414 gggaacttctacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttataaattaacgaccattttttatgtaataaataactattt 44379513  T
Q  213 gt 214  Q
    ||    
T  44379514 gt 44379515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 114 - 206
Target Start/End: Complemental strand, 44653577 - 44653484
Alignment:
Q  114 gggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgctt-acatttttataaattaactatcattttttatgaaagaaatag 206  Q
    ||||||||||||||||||| | |||| | |||||||||||||||||   || | | |||||||||||||| || ||||||||||||| ||||||    
T  44653577 gggaacttctacggtacactcacaaaatgaggtgtaccggtactcttttttcataattttataaattaacgattattttttatgaaataaatag 44653484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 114 - 214
Target Start/End: Complemental strand, 51344778 - 51344678
Alignment:
Q  114 gggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgctt-acatttttataaattaactatcattttttatgaaagaaataggtattt 212  Q
    |||||||||||||||||||   |||| ||||||||||||||||||  |||| | | |||||| ||||||| ||||||||||||| || |||||| |||||    
T  51344778 gggaacttctacggtacacttacaaagtaaggtgtaccggtactcctgcttcataattttat-aattaacgatcattttttatgtaataaatagctattt 51344680  T
Q  213 gt 214  Q
    ||    
T  51344679 gt 51344678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 114 - 158
Target Start/End: Original strand, 21288813 - 21288857
Alignment:
Q  114 gggaacttctacggtacacccgcaaattaaggtgtaccggtactc 158  Q
    ||||| |||||||||||||||||||||||||||||| ||||||||    
T  21288813 gggaatttctacggtacacccgcaaattaaggtgtatcggtactc 21288857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 169 - 229
Target Start/End: Complemental strand, 39678457 - 39678397
Alignment:
Q  169 ttttataaattaactatcattttttatgaaagaaataggtatttgttgacatatatatttt 229  Q
    |||||||||||||| |||||||||||||||| |||||| |||||||| | || ||||||||    
T  39678457 ttttataaattaacgatcattttttatgaaataaatagctatttgttaatatttatatttt 39678397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 13 - 78
Target Start/End: Original strand, 30227556 - 30227622
Alignment:
Q  13 atctccttcaaaccatagcgagctggtaatattcttttccttctgctggctt-gaatttcaagtctt 78  Q
    |||||||||| |||||||  ||||||||||||| |||||||| |||| |||| ||||||||||||||    
T  30227556 atctccttcagaccatagttagctggtaatattgttttccttttgctcgcttggaatttcaagtctt 30227622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 113 - 214
Target Start/End: Complemental strand, 36220813 - 36220711
Alignment:
Q  113 agggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgctt-acatttttataaattaactatcattttttatgaaagaaataggtatt 211  Q
    |||||||||||||||||||| | |||| | |||||||||| |||| | |||| | | |||||||||||||| || |||||||||| || |||||  ||||    
T  36220813 agggaacttctacggtacactcacaaagtgaggtgtaccgatacttttgcttcataattttataaattaacaattattttttatgtaataaatatctatt 36220714  T
Q  212 tgt 214  Q
    |||    
T  36220713 tgt 36220711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 113 - 158
Target Start/End: Complemental strand, 8966338 - 8966293
Alignment:
Q  113 agggaacttctacggtacacccgcaaattaaggtgtaccggtactc 158  Q
    |||||||||||||||||||| |  ||||||||||||||||||||||    
T  8966338 agggaacttctacggtacactcataaattaaggtgtaccggtactc 8966293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 113 - 150
Target Start/End: Original strand, 25592011 - 25592048
Alignment:
Q  113 agggaacttctacggtacacccgcaaattaaggtgtac 150  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  25592011 agggaacttctacggtacacccgtaaattaaggtgtac 25592048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 113 - 205
Target Start/End: Complemental strand, 32637034 - 32636941
Alignment:
Q  113 agggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgctt-acatttttataaattaactatcattttttatgaaagaaata 205  Q
    |||||| ||||||||||||| | |||| | |||||||||| |||||||| || | | ||| | |||||||| ||||||||||||| ||||||||    
T  32637034 agggaatttctacggtacactcacaaagtgaggtgtaccgatactctcgtttcataatttcacaaattaacgatcattttttatgtaagaaata 32636941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 115 - 159
Target Start/End: Original strand, 53516583 - 53516627
Alignment:
Q  115 ggaacttctacggtacacccgcaaattaaggtgtaccggtactct 159  Q
    |||| ||||| |||||||| |||||||||||||||||||||||||    
T  53516583 ggaatttctatggtacacctgcaaattaaggtgtaccggtactct 53516627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 114 - 192
Target Start/End: Original strand, 4817076 - 4817155
Alignment:
Q  114 gggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgc-ttacatttttataaattaactatcattttt 192  Q
    ||||| ||||||||||||| | |||| | |||||||||||||||||  | ||| | |||||||||||||| |||||||||    
T  4817076 gggaatttctacggtacactcacaaaatgaggtgtaccggtactcttactttataattttataaattaacgatcattttt 4817155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 116 - 214
Target Start/End: Complemental strand, 41982389 - 41982290
Alignment:
Q  116 gaacttctacggtacacccgcaaattaaggtgtaccggtactctcgc-ttacatttttataaattaactatcattttttatgaaagaaataggtatttgt 214  Q
    ||||||||||||||||| | |||| | ||||||| |||||||||  | ||| | ||||||||||| || || |||||||||| || |||||| |||||||    
T  41982389 gaacttctacggtacactcacaaagtgaggtgtatcggtactcttactttataattttataaattgacgataattttttatgtaataaatagttatttgt 41982290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 113 - 159
Target Start/End: Original strand, 48795438 - 48795485
Alignment:
Q  113 agggaacttctacggtacacc-cgcaaattaaggtgtaccggtactct 159  Q
    ||||||||||||||||||||| | |||||| |||||||||||||||||    
T  48795438 agggaacttctacggtacacctcacaaattgaggtgtaccggtactct 48795485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 117 - 214
Target Start/End: Complemental strand, 7862848 - 7862750
Alignment:
Q  117 aacttctacggtacacccgcaaattaaggtgtaccggtactctcgctt-acatttttataaattaactatcattttttatgaaagaaataggtatttgt 214  Q
    |||||||| ||||||  | |||| | ||||||||||||||||  |||| | | |||||||||||||| || |||||||||| || |||||| |||||||    
T  7862848 aacttctatggtacattcacaaagtgaggtgtaccggtactcctgcttcataattttataaattaacgataattttttatgtaataaatagctatttgt 7862750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 214
Target Start/End: Original strand, 14653809 - 14653883
Alignment:
Q  141 taaggtgtaccggtactctcgctt-acatttttataaattaactatcattttttatgaaagaaataggtatttgt 214  Q
    ||||||||||||||||||| |||| | | ||||| |||||||| || |||||||||| || |||||| |||||||    
T  14653809 taaggtgtaccggtactcttgcttcataattttagaaattaacgataattttttatgtaataaatagctatttgt 14653883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 113 - 214
Target Start/End: Original strand, 26456953 - 26457054
Alignment:
Q  113 agggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgctt-acatttttataaattaactatcattttttatgaaagaaataggtatt 211  Q
    |||||||||||||| ||||| |  ||| | ||||| ||||||||||  |||| | | |||||||||||||| ||||||||||||| || |||||| ||||    
T  26456953 agggaacttctacg-tacactcataaagtgaggtgaaccggtactcctgcttcataattttataaattaacgatcattttttatgtaataaatagctatt 26457051  T
Q  212 tgt 214  Q
    |||    
T  26457052 tgt 26457054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 113 - 212
Target Start/End: Complemental strand, 40021487 - 40021387
Alignment:
Q  113 agggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgcttacat--ttttataaattaactatcattttttatgaaagaaataggtat 210  Q
    |||||||||||| ||||| | | |||| | || |||| |||||||||||||| |||  ||||| |||||||| ||||||||| ||| ||||||||| |||    
T  40021487 agggaacttctatggtacgctcacaaagtgagatgtatcggtactctcgctt-catgattttacaaattaacgatcatttttcatgtaagaaatagctat 40021389  T
Q  211 tt 212  Q
    ||    
T  40021388 tt 40021387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 113 - 158
Target Start/End: Original strand, 3082177 - 3082222
Alignment:
Q  113 agggaacttctacggtacacccgcaaattaaggtgtaccggtactc 158  Q
    |||||| ||||| |||||| ||||||||||||||||| ||||||||    
T  3082177 agggaatttctatggtacatccgcaaattaaggtgtatcggtactc 3082222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 114 - 158
Target Start/End: Original strand, 29698322 - 29698367
Alignment:
Q  114 gggaacttctacggtacacc-cgcaaattaaggtgtaccggtactc 158  Q
    |||||||||||||||||||| | |||||| ||||||||||||||||    
T  29698322 gggaacttctacggtacacctcacaaattgaggtgtaccggtactc 29698367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 113 - 158
Target Start/End: Complemental strand, 35137847 - 35137802
Alignment:
Q  113 agggaacttctacggtacacccgcaaattaaggtgtaccggtactc 158  Q
    |||||||||||||||||||| || ||| |||||||||||| |||||    
T  35137847 agggaacttctacggtacactcgtaaaataaggtgtaccgatactc 35137802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 117 - 205
Target Start/End: Original strand, 37127807 - 37127895
Alignment:
Q  117 aacttctacggtacacccgcaaattaaggtgtaccggtactctcgctt-acatttttataaattaactatcattttttatgaaagaaata 205  Q
    |||||||||||||||| |  ||| | ||||||||| ||||||| |||| | | |||||||||||||| ||||||||||||| || |||||    
T  37127807 aacttctacggtacactcataaaatgaggtgtaccagtactct-gcttcataattttataaattaacgatcattttttatgtaataaata 37127895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 169 - 214
Target Start/End: Original strand, 41282586 - 41282631
Alignment:
Q  169 ttttataaattaactatcattttttatgaaagaaataggtatttgt 214  Q
    |||||||||||||| ||||||||||||| || |||||| |||||||    
T  41282586 ttttataaattaacaatcattttttatgtaataaatagttatttgt 41282631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 113 - 196
Target Start/End: Complemental strand, 1021381 - 1021297
Alignment:
Q  113 agggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgcttac-atttttataaattaactatcattttttatg 196  Q
    |||||||||||||| ||||| | |||| | ||||||| ||||||||  |||| | | |||||||||| ||| |||||||||||||    
T  1021381 agggaacttctacgatacactcacaaaatgaggtgtatcggtactcctgcttcctaattttataaatgaacgatcattttttatg 1021297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 158
Target Start/End: Complemental strand, 7672198 - 7672162
Alignment:
Q  122 ctacggtacacccgcaaattaaggtgtaccggtactc 158  Q
    |||||||||| ||| ||||||||||||||||||||||    
T  7672198 ctacggtacatccgtaaattaaggtgtaccggtactc 7672162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 158
Target Start/End: Original strand, 29628979 - 29629027
Alignment:
Q  110 aatagggaacttctacggtacacccgcaaattaaggtgtaccggtactc 158  Q
    |||||| |||||||||| |||| || |||||||||||||| ||||||||    
T  29628979 aataggaaacttctacgatacatccacaaattaaggtgtatcggtactc 29629027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 189 - 229
Target Start/End: Complemental strand, 37492247 - 37492207
Alignment:
Q  189 tttttatgaaagaaataggtatttgttgacatatatatttt 229  Q
    ||||||||||  |||||||| ||||||||||||||||||||    
T  37492247 tttttatgaagaaaataggtgtttgttgacatatatatttt 37492207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 116 - 196
Target Start/End: Original strand, 46507363 - 46507443
Alignment:
Q  116 gaacttctacggtacacccgcaaattaaggtgtaccggtactctcgcttacatttttataaattaactatcattttttatg 196  Q
    ||||||||||||||||| | |||| | ||||||| |||||||||   ||  | |||||||||| ||| |||||||||||||    
T  46507363 gaacttctacggtacactcacaaaatgaggtgtatcggtactctgttttttaattttataaatgaacgatcattttttatg 46507443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 156
Target Start/End: Original strand, 52178959 - 52178995
Alignment:
Q  120 ttctacggtacacccgcaaattaaggtgtaccggtac 156  Q
    |||||||||||||||  ||||||||||||||||||||    
T  52178959 ttctacggtacacccttaaattaaggtgtaccggtac 52178995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 114 - 158
Target Start/End: Original strand, 53289230 - 53289274
Alignment:
Q  114 gggaacttctacggtacacccgcaaattaaggtgtaccggtactc 158  Q
    ||||||||||||||||||| | |||| | ||||||||||||||||    
T  53289230 gggaacttctacggtacactcacaaaatgaggtgtaccggtactc 53289274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 90; Significance: 1e-43; HSPs: 51)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 114 - 229
Target Start/End: Complemental strand, 13410948 - 13410831
Alignment:
Q  114 gggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgcttac-atttttataaattaactatcattttttatgaaag-aaataggtatt 211  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||| ||| ||    
T  13410948 gggaacttctacggtacatccgcaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaaagaaaattggtgtt 13410849  T
Q  212 tgttgacatatatatttt 229  Q
    ||||||||||||||||||    
T  13410848 tgttgacatatatatttt 13410831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 114 - 229
Target Start/End: Complemental strand, 42917524 - 42917408
Alignment:
Q  114 gggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgcttacatttttataaattaactatcatt-ttttatgaaagaaataggtattt 212  Q
    |||||||| || ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||    
T  42917524 gggaacttttatggtacacccacaaattaaggtgtaccggtactctcgcttacatttttataaattaactatcatttttttatgaaagaaataggtgttt 42917425  T
Q  213 gttgacatatatatttt 229  Q
    ||||| |||||||||||    
T  42917424 gttgaaatatatatttt 42917408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 114 - 228
Target Start/End: Complemental strand, 32467449 - 32467334
Alignment:
Q  114 gggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgcttaca-tttttataaattaactatcattttttatgaaagaaataggtattt 212  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||| || |||||||||||||||||||||||||||||||  |||||||| |||    
T  32467449 gggaacttctacggtacacccgcaaattacggtgtaccggtactctcgcttgcaatttttataaattaactatcattttttatgaagaaaataggtgttt 32467350  T
Q  213 gttgacatatatattt 228  Q
    ||||||||||||||||    
T  32467349 gttgacatatatattt 32467334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 114 - 229
Target Start/End: Complemental strand, 34303054 - 34302938
Alignment:
Q  114 gggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgcttaca-tttttataaattaactatcattttttatgaaagaaataggtattt 212  Q
    |||||||||||||||||||| |||||||| ||||||||||||||||| |||| | |||||||||||||||||| ||||||||||||| |||||||| |||    
T  34303054 gggaacttctacggtacacctgcaaattacggtgtaccggtactctcacttataatttttataaattaactataattttttatgaaaaaaataggtgttt 34302955  T
Q  213 gttgacatatatatttt 229  Q
    |||||||||||||||||    
T  34302954 gttgacatatatatttt 34302938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 112 - 229
Target Start/End: Complemental strand, 3056804 - 3056686
Alignment:
Q  112 tagggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgcttaca-tttttataaattaactatcattttttatgaaagaaataggtat 210  Q
    ||||| ||||||| ||||||| || |||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||  |||||||| |    
T  3056804 taggggacttctatggtacactcgtaaattacggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaagaaaataggtgt 3056705  T
Q  211 ttgttgacatatatatttt 229  Q
    |||||||||||||||||||    
T  3056704 ttgttgacatatatatttt 3056686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 110 - 229
Target Start/End: Original strand, 1661688 - 1661808
Alignment:
Q  110 aatagggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgcttaca-tttttataaattaactatcattttttatgaaagaaataggt 208  Q
    ||||||| |||| || |||||||| | |||||| ||||||||||| |||||||||||| |||||||||||||||||||||||||||||||| ||||||||    
T  1661688 aataggggacttatatggtacacctgtaaattacggtgtaccggtgctctcgcttacaatttttataaattaactatcattttttatgaaaaaaataggt 1661787  T
Q  209 atttgttgacatatatatttt 229  Q
     ||||||||||||||||||||    
T  1661788 gtttgttgacatatatatttt 1661808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 110 - 229
Target Start/End: Original strand, 36338841 - 36338961
Alignment:
Q  110 aatagggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgcttaca-tttttataaattaactatcattttttatgaaagaaataggt 208  Q
    ||||||| ||||||| |||||||||| |||||| |||||||| ||||||||||||||| |||||||||||||||||||||||||||||||  ||||||||    
T  36338841 aataggggacttctatggtacacccgtaaattacggtgtaccagtactctcgcttacaatttttataaattaactatcattttttatgaagaaaataggt 36338940  T
Q  209 atttgttgacatatatatttt 229  Q
     ||||||||||| ||||||||    
T  36338941 gtttgttgacatgtatatttt 36338961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 117 - 229
Target Start/End: Complemental strand, 6561229 - 6561116
Alignment:
Q  117 aacttctacggtacacccgcaaattaaggtgtaccggtactctcgcttaca-tttttataaattaactatcattttttatgaaagaaataggtatttgtt 215  Q
    ||||||||||||||||| |||||||| |||||||||||| ||| ||||||| |||||||||||||||||| ||||||||||||  |||||||| ||||||    
T  6561229 aacttctacggtacacctgcaaattacggtgtaccggtattcttgcttacaatttttataaattaactataattttttatgaagaaaataggtgtttgtt 6561130  T
Q  216 gacatatatatttt 229  Q
    ||||||||||||||    
T  6561129 gacatatatatttt 6561116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 113 - 229
Target Start/End: Complemental strand, 24098277 - 24098160
Alignment:
Q  113 agggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgcttac-atttttataaattaactatcattttttatgaaagaaataggtatt 211  Q
    ||||||||||||| ||||||| |||||||| ||||||| ||||||||||||||| |||||||||||| || ||||||||||||||||  ||||| || ||    
T  24098277 agggaacttctacagtacacctgcaaattacggtgtactggtactctcgcttacaatttttataaataaaatatcattttttatgaagaaaataagtctt 24098178  T
Q  212 tgttgacatatatatttt 229  Q
    ||||||||||||||||||    
T  24098177 tgttgacatatatatttt 24098160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 113 - 229
Target Start/End: Original strand, 43237354 - 43237471
Alignment:
Q  113 agggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgcttac-atttttataaattaactatcattttttatgaaagaaataggtatt 211  Q
    |||||||||||| |||||||| |||||||| |||||| |||||||||||||||| ||||||||||||||| ||| ||||||||||||  |||||||| ||    
T  43237354 agggaacttctatggtacacctgcaaattacggtgtatcggtactctcgcttacaatttttataaattaattataattttttatgaagaaaataggtgtt 43237453  T
Q  212 tgttgacatatatatttt 229  Q
     |||||||||||||||||    
T  43237454 ggttgacatatatatttt 43237471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 118 - 229
Target Start/End: Complemental strand, 9535269 - 9535157
Alignment:
Q  118 acttctacggtacacccgcaaattaaggtgtaccggtactctcgcttaca-tttttataaattaactatcattttttatgaaagaaataggtatttgttg 216  Q
    ||||||| |||||||||| ||||||| ||||| |||||||||| |||||| |||||||||||||||||||||||||||||||  ||||| || |||||||    
T  9535269 acttctatggtacacccgtaaattaaagtgtaacggtactctcacttacaatttttataaattaactatcattttttatgaagaaaataagtgtttgttg 9535170  T
Q  217 acatatatatttt 229  Q
    |||||||||||||    
T  9535169 acatatatatttt 9535157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 115 - 229
Target Start/End: Complemental strand, 21606055 - 21605939
Alignment:
Q  115 ggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgcttac-atttttataaattaactatcattttttatgaaag-aaataggtattt 212  Q
    |||| |||||||||  | ||| |||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||| |||| ||| |||    
T  21606055 ggaatttctacggtgtatccgtaaattaaggtgtaccggtactctcgcttacaatttttataagttaactatcattttttatgaaagaaaattggtgttt 21605956  T
Q  213 gttgacatatatatttt 229  Q
    |||||||||||||||||    
T  21605955 gttgacatatatatttt 21605939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 111 - 229
Target Start/End: Complemental strand, 2141651 - 2141532
Alignment:
Q  111 atagggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgcttaca-tttttataaattaactatcattttttatgaaagaaataggta 209  Q
    |||||| ||||||| |||||||||  |||||| ||||||||| |||||||||||||| |||||||||||||||||||||||||||||||  ||||| ||     
T  2141651 ataggggacttctatggtacacccataaattacggtgtaccgttactctcgcttacaatttttataaattaactatcattttttatgaagaaaataagtg 2141552  T
Q  210 tttgttgacatatatatttt 229  Q
    |||||||| |||||||||||    
T  2141551 tttgttgatatatatatttt 2141532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 120 - 229
Target Start/End: Original strand, 18228466 - 18228576
Alignment:
Q  120 ttctacggtacacccgcaaattaaggtgtaccggtactctcgcttaca-tttttataaattaactatcattttttatgaaagaaataggtatttgttgac 218  Q
    ||||| |||||||||| |||||| ||| ||||||||||||| |||||| |||||||||||||||||||||||||||||||  ||||| || |||||||||    
T  18228466 ttctatggtacacccgtaaattacggtctaccggtactctcacttacaatttttataaattaactatcattttttatgaagaaaatacgtgtttgttgac 18228565  T
Q  219 atatatatttt 229  Q
    |||||||||||    
T  18228566 atatatatttt 18228576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 112 - 229
Target Start/End: Complemental strand, 6532988 - 6532870
Alignment:
Q  112 tagggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgcttaca-tttttataaattaactatcattttttatgaaagaaataggtat 210  Q
    |||||||||| ||| ||||| |||||||||| |||||| || |||||||||||||| ||||||||| ||||||||||| |||||||||  |||||||| |    
T  6532988 tagggaacttttactgtacatccgcaaattacggtgtatcgatactctcgcttacaatttttataatttaactatcatgttttatgaagaaaataggtgt 6532889  T
Q  211 ttgttgacatatatatttt 229  Q
    ||||| |||||||||||||    
T  6532888 ttgttaacatatatatttt 6532870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 113 - 229
Target Start/End: Complemental strand, 2414331 - 2414214
Alignment:
Q  113 agggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgcttaca-tttttataaattaactatcattttttatgaaagaaataggtatt 211  Q
    |||| ||||||| |||||| ||| ||||||  ||||| |||||||||| |||||| |||||||||||||||||||||||||||||||  ||||| || ||    
T  2414331 aggggacttctatggtacatccgtaaattacagtgtaacggtactctcacttacaatttttataaattaactatcattttttatgaagaaaataagtgtt 2414232  T
Q  212 tgttgacatatatatttt 229  Q
    ||||||||||||||||||    
T  2414231 tgttgacatatatatttt 2414214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 112 - 229
Target Start/End: Complemental strand, 13091321 - 13091204
Alignment:
Q  112 tagggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgctt-acatttttataaattaactatcattttttatgaaagaaataggtat 210  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||  ||| | |  |||||||||||||||||| ||||||||||| ||| || |||    
T  13091321 tagggaacttctacggtacacccgtaaattaaggtgtaccggtactcttacttcaaaaatttataaattaactatca-tttttatgaaataaaaagctat 13091223  T
Q  211 ttgttgacatatatatttt 229  Q
    ||||||| || ||||||||    
T  13091222 ttgttgatatttatatttt 13091204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 145 - 229
Target Start/End: Original strand, 6318317 - 6318402
Alignment:
Q  145 gtgtaccggtactctcgcttaca-tttttataaattaactatcattttttatgaaagaaataggtatttgttgacatatatatttt 229  Q
    ||||| ||||||||||||||||| |||||||||||||||||| |||||||| |||  |||||||||||||||||||||||||||||    
T  6318317 gtgtagcggtactctcgcttacaatttttataaattaactataattttttacgaagaaaataggtatttgttgacatatatatttt 6318402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 149 - 229
Target Start/End: Original strand, 6113808 - 6113890
Alignment:
Q  149 accggtactctcgcttaca-tttttataaattaactatcattttttatgaaag-aaataggtatttgttgacatatatatttt 229  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||    
T  6113808 accggtactctcgcttataatttttataaattaactatcattttttatgaaagaaaattggtgtttgttgacatatatatttt 6113890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 113 - 229
Target Start/End: Complemental strand, 14967638 - 14967522
Alignment:
Q  113 agggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgctt-acatttttataaattaactatcattttttatgaaagaaataggtatt 211  Q
    ||||||||||||||||||||| ||||||||||||||| |||||||||  ||| | |  |||||||||||||||||| ||||||||||| ||| || ||||    
T  14967638 agggaacttctacggtacacctgcaaattaaggtgtatcggtactcttacttcaaaaatttataaattaactatca-tttttatgaaataaaaagctatt 14967540  T
Q  212 tgttgacatatatatttt 229  Q
    |||||| || ||||||||    
T  14967539 tgttgatatctatatttt 14967522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 114 - 225
Target Start/End: Complemental strand, 22780919 - 22780807
Alignment:
Q  114 gggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgcttacatt-tttataaattaactatcattttttatgaaagaaataggtattt 212  Q
    |||||||||||||||||||  |||||||||| |||||||| ||||| | ||| |   |||||||||||||||||||||||| ||||| |||||| | |||    
T  22780919 gggaacttctacggtacacttgcaaattaagatgtaccggcactcttgtttaaaaaatttataaattaactatcattttttgtgaaaaaaatagttgttt 22780820  T
Q  213 gttgacatatata 225  Q
    |||||||| ||||    
T  22780819 gttgacatttata 22780807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 149 - 229
Target Start/End: Complemental strand, 2029724 - 2029643
Alignment:
Q  149 accggtactctcgcttaca-tttttataaattaactatcattttttatgaaagaaataggtatttgttgacatatatatttt 229  Q
    |||| |||||||||||||| ||||||||| |||||| ||||||||||||||  |||||||| ||||||||| ||||||||||    
T  2029724 accgatactctcgcttacaatttttataatttaactgtcattttttatgaagaaaataggtgtttgttgacttatatatttt 2029643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 113 - 205
Target Start/End: Original strand, 36427904 - 36427997
Alignment:
Q  113 agggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgct-tacatttttataaattaactatcattttttatgaaagaaata 205  Q
    |||||||||||||||||||| | |||| | ||||||||||||||||| |||  | | |||||||||||||| |||||||||| ||||| |||||    
T  36427904 agggaacttctacggtacactcacaaagtgaggtgtaccggtactcttgctcaataattttataaattaacgatcattttttgtgaaataaata 36427997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 111 - 214
Target Start/End: Complemental strand, 6260427 - 6260323
Alignment:
Q  111 atagggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgctt-acatttttataaattaactatcattttttatgaaagaaataggta 209  Q
    |||||||||||||||||||||| |  ||| | |||||||||||||||||  ||| | | |||||||||| ||||||| ||||||||| || |||||| ||    
T  6260427 atagggaacttctacggtacactcataaaatgaggtgtaccggtactcttccttcataattttataaataaactatctttttttatgtaataaatagcta 6260328  T
Q  210 tttgt 214  Q
    |||||    
T  6260327 tttgt 6260323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 118 - 217
Target Start/End: Complemental strand, 9589610 - 9589511
Alignment:
Q  118 acttctacggtacacccgcaaattaaggtgtaccggtactctcgctt-acatttttataaattaactatcattttttatgaaagaaataggtatttgttg 216  Q
    |||||||||||||| || |||||||||||||| |||||||||  ||| | |  |||||||||||||||||| ||||||||||| ||| || |||||||||    
T  9589610 acttctacggtacatccacaaattaaggtgtatcggtactcttacttcaaaaatttataaattaactatca-tttttatgaaataaaaagctatttgttg 9589512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 115 - 158
Target Start/End: Original strand, 3425090 - 3425133
Alignment:
Q  115 ggaacttctacggtacacccgcaaattaaggtgtaccggtactc 158  Q
    ||||||||||||||||||||||||||||| ||||||||||||||    
T  3425090 ggaacttctacggtacacccgcaaattaaagtgtaccggtactc 3425133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 115 - 229
Target Start/End: Complemental strand, 29744307 - 29744193
Alignment:
Q  115 ggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgctt-acatttttataaattaactatcattttttatgaaagaaataggtatttg 213  Q
    ||||||| |||||||||| | |||||||| ||||||||||||| | |||| | |  |||||||||||||||||| ||||||||||| ||| || |||||     
T  29744307 ggaacttatacggtacactcacaaattaaagtgtaccggtacttttgcttcaaaaatttataaattaactatca-tttttatgaaataaagagctattta 29744209  T
Q  214 ttgacatatatatttt 229  Q
    |||| || ||||||||    
T  29744208 ttgatatttatatttt 29744193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 116 - 205
Target Start/End: Original strand, 479676 - 479766
Alignment:
Q  116 gaacttctacggtacacccgcaaattaaggtgtaccggtactctcgctt-acatttttataaattaactatcattttttatgaaagaaata 205  Q
    ||||||||||||||||| | |||| | |||||||| ||||||||||||| | | ||||| |||||||| ||||||||| ||| ||||||||    
T  479676 gaacttctacggtacactcacaaagtgaggtgtactggtactctcgcttcataattttacaaattaacgatcatttttcatgtaagaaata 479766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 120 - 158
Target Start/End: Original strand, 2318431 - 2318469
Alignment:
Q  120 ttctacggtacacccgcaaattaaggtgtaccggtactc 158  Q
    |||||||||||||||||||||||||||||||||||||||    
T  2318431 ttctacggtacacccgcaaattaaggtgtaccggtactc 2318469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 115 - 192
Target Start/End: Original strand, 39816506 - 39816584
Alignment:
Q  115 ggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgctt-acatttttataaattaactatcattttt 192  Q
    |||||||||||||||||| | |||| | ||||||||||||||||| |||| | | |||||||||||||| |||||||||    
T  39816506 ggaacttctacggtacactcacaaagtgaggtgtaccggtactcttgcttcataattttataaattaacgatcattttt 39816584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 113 - 229
Target Start/End: Original strand, 12362356 - 12362472
Alignment:
Q  113 agggaacttctacggtacacccgcaaattaaggtgtaccggtac-tctcgcttacatttttataaattaactatcattttttatgaaagaaataggtatt 211  Q
    |||||||||||| |||||| |||||||||||||||||||||||| |||  || | |  | | |||||||||||| | |||||||| || ||| || ||||    
T  12362356 agggaacttctaaggtacatccgcaaattaaggtgtaccggtacttctatctcaaaaatctttaaattaactatta-tttttatggaataaagagctatt 12362454  T
Q  212 tgttgacatatatatttt 229  Q
    |||||| |||||||||||    
T  12362455 tgttgatatatatatttt 12362472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 113 - 158
Target Start/End: Complemental strand, 28332529 - 28332484
Alignment:
Q  113 agggaacttctacggtacacccgcaaattaaggtgtaccggtactc 158  Q
    ||||||||||||||||||||  ||||||||||||||||||||||||    
T  28332529 agggaacttctacggtacacttgcaaattaaggtgtaccggtactc 28332484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 114 - 205
Target Start/End: Complemental strand, 13127387 - 13127295
Alignment:
Q  114 gggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgctt-acatttttataaattaactatcattttttatgaaagaaata 205  Q
    ||||||||||||||||||  | |||| | |||||||||||||||||  ||| | | |||||||||||||| || ||||||||||||| |||||    
T  13127387 gggaacttctacggtacattcacaaaatgaggtgtaccggtactctttcttcataattttataaattaacgataattttttatgaaataaata 13127295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 115 - 229
Target Start/End: Original strand, 40563116 - 40563231
Alignment:
Q  115 ggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgctt-acatttttataaattaactatcattttttatgaaagaaataggtatttg 213  Q
    |||||||||||||||||| |  ||| | |||||||||| |||||| |||| | | |||||||||||||| |||||||| | ||||| |||||  ||||||    
T  40563116 ggaacttctacggtacactcataaaatgaggtgtaccgatactcttgcttcataattttataaattaacgatcattttgtgtgaaataaataattatttg 40563215  T
Q  214 ttgacatatatatttt 229  Q
    |  |||| ||||||||    
T  40563216 tcaacatttatatttt 40563231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 114 - 159
Target Start/End: Original strand, 4039469 - 4039515
Alignment:
Q  114 gggaacttctacggtacacc-cgcaaattaaggtgtaccggtactct 159  Q
    |||||||||||||||||||| | ||||||||||||||||||||||||    
T  4039469 gggaacttctacggtacacctcacaaattaaggtgtaccggtactct 4039515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 112 - 205
Target Start/End: Complemental strand, 33210778 - 33210684
Alignment:
Q  112 tagggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgctt-acatttttataaattaactatcattttttatgaaagaaata 205  Q
    |||| |||||||||||||||| | |||| | |||||||||||||| ||  ||| | | |||||||||||||| || ||||||||||||| |||||    
T  33210778 taggaaacttctacggtacactcacaaaatgaggtgtaccggtaccctttcttcataattttataaattaacgataattttttatgaaataaata 33210684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 113 - 205
Target Start/End: Complemental strand, 29960274 - 29960181
Alignment:
Q  113 agggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgctt-acatttttataaattaactatcattttttatgaaagaaata 205  Q
    ||||||||| |||||||||| |  ||| | |||||||||||||||||  ||| | | |||||||||||||| ||| |||||||||||| |||||    
T  29960274 agggaacttttacggtacactcataaaatgaggtgtaccggtactctttcttcataattttataaattaacgatcgttttttatgaaataaata 29960181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 114 - 158
Target Start/End: Original strand, 13795273 - 13795316
Alignment:
Q  114 gggaacttctacggtacacccgcaaattaaggtgtaccggtactc 158  Q
    |||||||||||||||||||| |||||||||||||||||| |||||    
T  13795273 gggaacttctacggtacacc-gcaaattaaggtgtaccgatactc 13795316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 113 - 191
Target Start/End: Complemental strand, 29996903 - 29996823
Alignment:
Q  113 agggaacttctacggtacacc-cgcaaattaaggtgtaccggtactctcgct-tacatttttataaattaactatcatttt 191  Q
    ||||||||||||||||||||  | ||||||||||| |||||||||||| ||| || |  ||||||||||||| ||||||||    
T  29996903 agggaacttctacggtacacatcacaaattaaggtttaccggtactcttgctctataaatttataaattaacgatcatttt 29996823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 125 - 212
Target Start/End: Original strand, 30753458 - 30753546
Alignment:
Q  125 cggtacacccgcaaattaaggtgtaccggtactctcgctt-acatttttataaattaactatcattttttatgaaagaaataggtattt 212  Q
    |||||||| | |||| | |||||||||||||||||  ||| | | |||||||||||||| ||||||||||||| || |||||| |||||    
T  30753458 cggtacactcacaaaatgaggtgtaccggtactcttactttataattttataaattaacgatcattttttatgtaataaatagttattt 30753546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 110 - 192
Target Start/End: Complemental strand, 13119209 - 13119126
Alignment:
Q  110 aatagggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgctt-acatttttataaattaactatcattttt 192  Q
    |||||| ||||||||||||||||   |||| | ||||||||||||||||  |||| | | |||||||||||||| |||||||||    
T  13119209 aataggaaacttctacggtacacttacaaagtgaggtgtaccggtactcctgcttcataattttataaattaacgatcattttt 13119126  T

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Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 112 - 229
Target Start/End: Complemental strand, 36156249 - 36156132
Alignment:
Q  112 tagggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgc-ttacatttttataaattaactatcattttttatgaaagaaataggtat 210  Q
    |||| ||||||||| |||||| || ||||| ||||||||||||||||| || ||| |  | |||||| |||| ||||  |||||||||| |||||| |||    
T  36156249 taggaaacttctacagtacactcgtaaattgaggtgtaccggtactcttgctttataaatctataaactaacgatca-attttatgaaataaatagttat 36156151  T
Q  211 ttgttgacatatatatttt 229  Q
    |||| | ||| ||||||||    
T  36156150 ttgtcggcatttatatttt 36156132  T

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Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 113 - 158
Target Start/End: Original strand, 39939032 - 39939078
Alignment:
Q  113 agggaacttctacggtacacc-cgcaaattaaggtgtaccggtactc 158  Q
    ||||||||||||||||||||| | |||||| ||||||||||||||||    
T  39939032 agggaacttctacggtacacctcacaaattgaggtgtaccggtactc 39939078  T

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Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 115 - 164
Target Start/End: Complemental strand, 702355 - 702306
Alignment:
Q  115 ggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgctt 164  Q
    |||||||||||||||||| | |||| | ||||||||||||||||| ||||    
T  702355 ggaacttctacggtacactcacaaaatgaggtgtaccggtactcttgctt 702306  T

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Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 110 - 158
Target Start/End: Original strand, 5204613 - 5204662
Alignment:
Q  110 aatagggaacttctacggtacacc-cgcaaattaaggtgtaccggtactc 158  Q
    |||||||||||||||||||||||| | |||||| ||||||| ||||||||    
T  5204613 aatagggaacttctacggtacacctcacaaattgaggtgtatcggtactc 5204662  T

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Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 114 - 158
Target Start/End: Original strand, 5512682 - 5512727
Alignment:
Q  114 gggaacttctacggtacacc-cgcaaattaaggtgtaccggtactc 158  Q
    |||||||||||||||||||| | |||||| ||||||||||||||||    
T  5512682 gggaacttctacggtacacctcacaaattgaggtgtaccggtactc 5512727  T

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Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 120 - 157
Target Start/End: Original strand, 21051327 - 21051364
Alignment:
Q  120 ttctacggtacacccgcaaattaaggtgtaccggtact 157  Q
    |||||||||||||||| |||||||||||||||| ||||    
T  21051327 ttctacggtacacccgtaaattaaggtgtaccgatact 21051364  T

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Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 214
Target Start/End: Complemental strand, 12334657 - 12334613
Alignment:
Q  170 tttataaattaactatcattttttatgaaagaaataggtatttgt 214  Q
    ||||||||||||| ||||||||||||| || |||||| |||||||    
T  12334657 tttataaattaacgatcattttttatgtaataaatagctatttgt 12334613  T

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Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 114 - 158
Target Start/End: Complemental strand, 17069391 - 17069347
Alignment:
Q  114 gggaacttctacggtacacccgcaaattaaggtgtaccggtactc 158  Q
    ||||||||||||||| ||| || ||||| ||||||||||||||||    
T  17069391 gggaacttctacggtgcactcgtaaattgaggtgtaccggtactc 17069347  T

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Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 114 - 157
Target Start/End: Complemental strand, 31588641 - 31588597
Alignment:
Q  114 gggaacttctacggtacacc-cgcaaattaaggtgtaccggtact 157  Q
    |||||||||||||||||||| | |||||| |||||||||||||||    
T  31588641 gggaacttctacggtacacctcacaaattgaggtgtaccggtact 31588597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 111 - 158
Target Start/End: Original strand, 40756538 - 40756586
Alignment:
Q  111 atagggaacttctacggtacacc-cgcaaattaaggtgtaccggtactc 158  Q
    ||||||||||||||||||||||| | |||||| ||||||| ||||||||    
T  40756538 atagggaacttctacggtacacctcacaaattgaggtgtatcggtactc 40756586  T

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Target: scaffold0283 (Bit Score: 79; Significance: 4e-37; HSPs: 1)
Name: scaffold0283
Description:

Target: scaffold0283; HSP #1
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 111 - 229
Target Start/End: Complemental strand, 6647 - 6529
Alignment:
Q  111 atagggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgcttacatttttataaattaactatcattttttatgaaagaaataggtat 210  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||| |  || ||||  |||||| |||||||||| |    
T  6647 atagggaacttctacggtacacccgcaatttaaggtgtaccggtactctcggttacatttttataaatcacttaccattccttatgacagaaataggtgt 6548  T
Q  211 ttgttgacatatatatttt 229  Q
    |||||||||||||||||||    
T  6547 ttgttgacatatatatttt 6529  T

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Target: scaffold0005 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 149 - 229
Target Start/End: Original strand, 36643 - 36725
Alignment:
Q  149 accggtactctcgcttaca-tttttataaattaactatcattttttatgaaag-aaataggtatttgttgacatatatatttt 229  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||    
T  36643 accggtactctcgcttacaatttttataaattaactatcattttttatgaaagaaaattggtgtttgttgacatatatatttt 36725  T

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Target: scaffold0625 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0625
Description:

Target: scaffold0625; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 113 - 158
Target Start/End: Original strand, 6265 - 6310
Alignment:
Q  113 agggaacttctacggtacacccgcaaattaaggtgtaccggtactc 158  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  6265 agggaacttctacggtacacccgcaaattaaggtgtaccggtactc 6310  T

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Target: scaffold0667 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0667
Description:

Target: scaffold0667; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 114 - 214
Target Start/End: Complemental strand, 239 - 138
Alignment:
Q  114 gggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgctt-acatttttataaattaactatcattttttatgaaagaaataggtattt 212  Q
    ||||||||||||||||||| | |||| | |||||||||||||||   |||| | | |||||||||||||| ||||||||||||| || |||||| |||||    
T  239 gggaacttctacggtacactcacaaagtgaggtgtaccggtacttctgcttcataattttataaattaacgatcattttttatgtaataaatagctattt 140  T
Q  213 gt 214  Q
    ||    
T  139 gt 138  T

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Target: scaffold0113 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 113 - 229
Target Start/End: Complemental strand, 29652 - 29535
Alignment:
Q  113 agggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgctt-acatttttataaattaactatcattttttatgaaagaaataggtatt 211  Q
    ||||||| ||||||||||||| ||||||||||||||||||||||||   ||| | |  | | |||||||||||| |||||||||| || ||| || ||||    
T  29652 agggaacatctacggtacacctgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactattattttttatggaataaagagctatt 29553  T
Q  212 tgttgacatatatatttt 229  Q
    |||||| || ||||||||    
T  29552 tgttgatatttatatttt 29535  T

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Target: scaffold0604 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0604
Description:

Target: scaffold0604; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 115 - 158
Target Start/End: Complemental strand, 2425 - 2382
Alignment:
Q  115 ggaacttctacggtacacccgcaaattaaggtgtaccggtactc 158  Q
    |||| ||||||| |||||||||||||||||||||||||||||||    
T  2425 ggaatttctacgatacacccgcaaattaaggtgtaccggtactc 2382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0923 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0923
Description:

Target: scaffold0923; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 114 - 196
Target Start/End: Complemental strand, 91 - 8
Alignment:
Q  114 gggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgctt-acatttttataaattaactatcattttttatg 196  Q
    ||||||||||||||||||| | |||| | ||||||||||||||||  |||| | | |||||||||||||| || | ||||||||    
T  91 gggaacttctacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttataaattaacgataactttttatg 8  T

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Target: scaffold0008 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 114 - 228
Target Start/End: Complemental strand, 45479 - 45365
Alignment:
Q  114 gggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgcttac-atttttataaattaactatcattttttatgaaagaaataggtattt 212  Q
    ||||||||||||  ||||| || |||||| ||||||||||||||||  ||||| |  | ||||||||||| ||||  |||||||||| |||||| |||||    
T  45479 gggaacttctacactacactcgtaaattatggtgtaccggtactcttacttactaaatctataaattaacgatca-attttatgaaataaatagttattt 45381  T
Q  213 gttgacatatatattt 228  Q
    || | ||| |||||||    
T  45380 gtcggcatttatattt 45365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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