View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11939_high_1 (Length: 737)

Name: NF11939_high_1
Description: NF11939
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11939_high_1
NF11939_high_1
[»] chr3 (67 HSPs)
chr3 (407-717)||(6110064-6110374)
chr3 (407-717)||(10572489-10572799)
chr3 (407-717)||(15600781-15601091)
chr3 (407-717)||(15607326-15607636)
chr3 (409-717)||(16482380-16482688)
chr3 (413-717)||(10579252-10579556)
chr3 (410-717)||(13211305-13211612)
chr3 (413-717)||(17781015-17781319)
chr3 (409-717)||(18522665-18522973)
chr3 (407-717)||(13248607-13248917)
chr3 (407-717)||(8490488-8490805)
chr3 (407-717)||(15357483-15357793)
chr3 (409-717)||(18519980-18520285)
chr3 (426-717)||(15342116-15342407)
chr3 (409-714)||(13516813-13517118)
chr3 (409-717)||(17200081-17200389)
chr3 (413-717)||(32056796-32057101)
chr3 (413-717)||(1647418-1647726)
chr3 (413-625)||(19089734-19089946)
chr3 (407-713)||(29924971-29925277)
chr3 (407-713)||(29974124-29974430)
chr3 (409-717)||(16200434-16200740)
chr3 (407-568)||(18640792-18640953)
chr3 (513-717)||(17136465-17136663)
chr3 (409-646)||(16200128-16200363)
chr3 (414-711)||(24253291-24253589)
chr3 (578-717)||(15846709-15846847)
chr3 (578-717)||(21034229-21034367)
chr3 (587-717)||(14890391-14890520)
chr3 (578-717)||(20147727-20147865)
chr3 (409-471)||(18534758-18534820)
chr3 (313-371)||(8490394-8490452)
chr3 (587-717)||(21398792-21398921)
chr3 (315-371)||(6109972-6110028)
chr3 (315-371)||(13248515-13248571)
chr3 (578-717)||(55427012-55427150)
chr3 (314-371)||(18640989-18641046)
chr3 (315-371)||(13211211-13211267)
chr3 (578-717)||(12299902-12300039)
chr3 (578-717)||(14147012-14147150)
chr3 (409-454)||(18510924-18510969)
chr3 (313-365)||(10579603-10579655)
chr3 (323-371)||(17136145-17136193)
chr3 (570-672)||(9504446-9504548)
chr3 (313-371)||(16482727-16482784)
chr3 (315-371)||(15607672-15607729)
chr3 (244-315)||(12840202-12840271)
chr3 (315-371)||(15351237-15351293)
chr3 (315-371)||(15357829-15357885)
chr3 (323-371)||(17200427-17200475)
chr3 (323-371)||(18519893-18519941)
chr3 (315-365)||(10572840-10572890)
chr3 (655-717)||(11787654-11787716)
chr3 (315-371)||(15601127-15601184)
chr3 (323-371)||(1647768-1647816)
chr3 (323-371)||(13516727-13516775)
chr3 (323-371)||(17781358-17781406)
chr3 (323-371)||(18534671-18534719)
chr3 (323-371)||(19089985-19090033)
chr3 (323-371)||(32057144-32057192)
chr3 (583-698)||(8251933-8252048)
chr3 (494-633)||(19345656-19345795)
chr3 (655-717)||(15317346-15317408)
chr3 (655-717)||(25978901-25978963)
chr3 (209-285)||(14031973-14032049)
chr3 (323-371)||(18510837-18510885)
chr3 (323-371)||(18522578-18522626)
[»] scaffold0234 (4 HSPs)
scaffold0234 (407-717)||(2218-2528)
scaffold0234 (407-717)||(11109-11419)
scaffold0234 (315-371)||(2564-2620)
scaffold0234 (315-371)||(11455-11511)
[»] chr1 (45 HSPs)
chr1 (407-717)||(18252030-18252340)
chr1 (407-717)||(18532411-18532721)
chr1 (407-717)||(27131306-27131616)
chr1 (409-717)||(21171130-21171438)
chr1 (409-717)||(27310474-27310782)
chr1 (409-717)||(16358932-16359240)
chr1 (413-717)||(36816530-36816834)
chr1 (407-717)||(3855816-3856126)
chr1 (407-717)||(22657118-22657429)
chr1 (413-711)||(27277460-27277756)
chr1 (441-710)||(12014188-12014457)
chr1 (419-696)||(9917837-9918106)
chr1 (441-692)||(12006461-12006712)
chr1 (563-716)||(23507056-23507209)
chr1 (578-717)||(19706612-19706750)
chr1 (578-717)||(28134896-28135034)
chr1 (578-717)||(43802538-43802676)
chr1 (578-717)||(9456107-9456245)
chr1 (578-717)||(20779818-20779956)
chr1 (578-717)||(22670430-22670568)
chr1 (578-717)||(42817162-42817300)
chr1 (578-717)||(20391412-20391550)
chr1 (315-371)||(18251936-18251992)
chr1 (315-371)||(18532757-18532813)
chr1 (578-717)||(22612483-22612621)
chr1 (578-696)||(47667668-47667785)
chr1 (578-717)||(35930573-35930711)
chr1 (613-709)||(22641778-22641871)
chr1 (314-371)||(27310821-27310878)
chr1 (587-717)||(633934-634063)
chr1 (314-371)||(16359280-16359337)
chr1 (662-715)||(51997353-51997406)
chr1 (662-717)||(8727741-8727796)
chr1 (211-272)||(15304320-15304381)
chr1 (413-482)||(30720625-30720694)
chr1 (323-368)||(36816881-36816926)
chr1 (323-371)||(21171479-21171527)
chr1 (70-121)||(15308021-15308072)
chr1 (595-717)||(26923557-26923678)
chr1 (437-514)||(3403248-3403325)
chr1 (437-514)||(3443494-3443571)
chr1 (326-371)||(3856164-3856209)
chr1 (313-371)||(27131652-27131706)
chr1 (323-367)||(22657469-22657513)
chr1 (655-717)||(29096789-29096851)
[»] scaffold0220 (2 HSPs)
scaffold0220 (407-717)||(18288-18598)
scaffold0220 (314-371)||(18195-18252)
[»] chr7 (56 HSPs)
chr7 (407-717)||(29327784-29328094)
chr7 (407-717)||(11535959-11536269)
chr7 (407-717)||(11542877-11543187)
chr7 (409-717)||(15152445-15152753)
chr7 (409-717)||(18561009-18561317)
chr7 (409-717)||(12750828-12751136)
chr7 (413-717)||(12738542-12738846)
chr7 (409-694)||(18257762-18258047)
chr7 (409-628)||(15148144-15148363)
chr7 (413-717)||(13392157-13392460)
chr7 (429-625)||(2364917-2365112)
chr7 (440-665)||(7396221-7396450)
chr7 (587-717)||(8464999-8465128)
chr7 (413-687)||(39111819-39112092)
chr7 (578-717)||(2204543-2204681)
chr7 (578-717)||(18400095-18400233)
chr7 (578-717)||(18407079-18407217)
chr7 (578-717)||(19230879-19231017)
chr7 (578-717)||(30254129-30254267)
chr7 (578-717)||(48808669-48808807)
chr7 (606-710)||(10235361-10235465)
chr7 (578-717)||(15729742-15729880)
chr7 (578-717)||(18139511-18139649)
chr7 (545-710)||(7662569-7662733)
chr7 (315-371)||(2653275-2653331)
chr7 (481-717)||(3132748-3132983)
chr7 (315-371)||(11543223-11543279)
chr7 (323-371)||(12738451-12738499)
chr7 (588-696)||(47833875-47833983)
chr7 (578-717)||(10669075-10669213)
chr7 (209-290)||(4810736-4810817)
chr7 (315-371)||(11536305-11536361)
chr7 (323-371)||(12750741-12750789)
chr7 (323-371)||(15152358-15152406)
chr7 (587-687)||(19859122-19859221)
chr7 (323-370)||(29327698-29327745)
chr7 (323-371)||(15148057-15148105)
chr7 (662-714)||(16011515-16011567)
chr7 (654-717)||(2365169-2365232)
chr7 (662-716)||(14591924-14591978)
chr7 (655-717)||(41681141-41681203)
chr7 (457-522)||(10234179-10234244)
chr7 (220-315)||(7394811-7394905)
chr7 (323-370)||(13392038-13392085)
chr7 (578-717)||(19393597-19393735)
chr7 (578-717)||(47167032-47167170)
chr7 (579-717)||(19388544-19388681)
chr7 (314-371)||(18258087-18258144)
chr7 (407-439)||(2653207-2653239)
chr7 (585-717)||(25845649-25845780)
chr7 (585-717)||(25846068-25846199)
chr7 (669-717)||(31190612-31190660)
chr7 (647-694)||(7396464-7396511)
chr7 (578-717)||(28130552-28130690)
chr7 (662-717)||(34128647-34128702)
chr7 (209-306)||(318367-318462)
[»] chr6 (50 HSPs)
chr6 (407-717)||(27381149-27381459)
chr6 (407-717)||(27471532-27471842)
chr6 (409-717)||(17684366-17684674)
chr6 (407-717)||(29308890-29309200)
chr6 (407-717)||(29315850-29316160)
chr6 (407-717)||(17691337-17691647)
chr6 (409-717)||(188874-189182)
chr6 (409-717)||(11651725-11652033)
chr6 (409-677)||(16566257-16566525)
chr6 (409-625)||(25537148-25537364)
chr6 (409-695)||(13359188-13359474)
chr6 (430-716)||(27925772-27926062)
chr6 (446-711)||(20553492-20553755)
chr6 (445-717)||(17850392-17850663)
chr6 (621-715)||(16394344-16394438)
chr6 (578-717)||(18020014-18020152)
chr6 (590-717)||(2669476-2669603)
chr6 (578-717)||(16789062-16789200)
chr6 (578-717)||(22860061-22860199)
chr6 (563-710)||(28172712-28172859)
chr6 (655-717)||(27296877-27296939)
chr6 (653-717)||(25537088-25537152)
chr6 (578-717)||(1586281-1586419)
chr6 (578-717)||(27508520-27508658)
chr6 (578-717)||(27528106-27528244)
chr6 (317-371)||(17691683-17691737)
chr6 (445-717)||(20736502-20736773)
chr6 (315-371)||(27381495-27381551)
chr6 (315-371)||(27471878-27471934)
chr6 (315-371)||(29308798-29308854)
chr6 (315-371)||(29315758-29315814)
chr6 (426-717)||(8509941-8510233)
chr6 (578-717)||(14074471-14074609)
chr6 (315-371)||(17684712-17684768)
chr6 (578-717)||(8612906-8613044)
chr6 (314-369)||(11651629-11651684)
chr6 (672-717)||(16559369-16559414)
chr6 (578-682)||(13995151-13995254)
chr6 (323-371)||(25537405-25537453)
chr6 (414-469)||(31258065-31258120)
chr6 (323-371)||(13359512-13359560)
chr6 (323-371)||(16566563-16566611)
chr6 (601-717)||(19347097-19347212)
chr6 (662-717)||(5758654-5758709)
chr6 (180-315)||(24967457-24967592)
chr6 (244-284)||(33661131-33661171)
chr6 (655-714)||(21994655-21994714)
chr6 (329-371)||(16394484-16394526)
chr6 (342-371)||(189221-189250)
chr6 (423-488)||(22259925-22259990)
[»] chr4 (76 HSPs)
chr4 (407-717)||(19926657-19926967)
chr4 (407-717)||(55612683-55612993)
chr4 (407-717)||(26970463-26970773)
chr4 (409-717)||(18262214-18262522)
chr4 (407-717)||(868597-868907)
chr4 (407-717)||(5707320-5707630)
chr4 (407-717)||(26963640-26963950)
chr4 (407-717)||(5713948-5714258)
chr4 (407-717)||(10621230-10621540)
chr4 (407-717)||(10628309-10628619)
chr4 (409-717)||(18269070-18269383)
chr4 (409-717)||(4426501-4426808)
chr4 (409-717)||(28393031-28393339)
chr4 (419-717)||(8858179-8858477)
chr4 (419-717)||(8845215-8845513)
chr4 (415-717)||(20311299-20311602)
chr4 (413-714)||(35223576-35223867)
chr4 (413-717)||(5668024-5668327)
chr4 (407-522)||(12357136-12357251)
chr4 (445-717)||(56516094-56516366)
chr4 (413-631)||(10677538-10677753)
chr4 (413-631)||(10891178-10891393)
chr4 (409-716)||(5616215-5616523)
chr4 (433-717)||(21454036-21454319)
chr4 (578-717)||(15461488-15461626)
chr4 (569-717)||(32646698-32646846)
chr4 (578-717)||(2677004-2677142)
chr4 (578-717)||(15815012-15815150)
chr4 (578-717)||(17300132-17300270)
chr4 (578-717)||(18111216-18111354)
chr4 (578-717)||(34975542-34975680)
chr4 (588-717)||(5870419-5870547)
chr4 (578-717)||(3369196-3369334)
chr4 (315-371)||(5713856-5713912)
chr4 (315-371)||(19927003-19927059)
chr4 (315-371)||(26963548-26963604)
chr4 (315-371)||(26970371-26970427)
chr4 (578-717)||(4676156-4676294)
chr4 (578-717)||(18163153-18163291)
chr4 (578-717)||(20243928-20244066)
chr4 (578-717)||(26531604-26531742)
chr4 (591-669)||(24700213-24700291)
chr4 (314-371)||(5707227-5707284)
chr4 (315-371)||(10621576-10621632)
chr4 (315-371)||(12357044-12357100)
chr4 (317-371)||(868507-868561)
chr4 (313-371)||(55612592-55612650)
chr4 (315-371)||(10628655-10628711)
chr4 (315-371)||(17142372-17142428)
chr4 (313-369)||(28393380-28393436)
chr4 (578-717)||(1941715-1941853)
chr4 (323-371)||(4426847-4426895)
chr4 (315-371)||(18268976-18269032)
chr4 (456-523)||(39074278-39074346)
chr4 (662-717)||(10677479-10677534)
chr4 (662-717)||(10891119-10891174)
chr4 (655-717)||(19365586-19365648)
chr4 (218-306)||(21556849-21556935)
chr4 (322-371)||(55992680-55992729)
chr4 (544-624)||(39074190-39074270)
chr4 (578-717)||(4546071-4546209)
chr4 (578-717)||(32636475-32636613)
chr4 (563-645)||(9937933-9938015)
chr4 (634-716)||(34777893-34777975)
chr4 (330-371)||(5668371-5668412)
chr4 (252-315)||(10584091-10584151)
chr4 (323-371)||(8845118-8845166)
chr4 (323-371)||(8858082-8858130)
chr4 (331-371)||(18262136-18262176)
chr4 (445-623)||(30040740-30040919)
chr4 (662-717)||(9487625-9487680)
chr4 (662-717)||(9538033-9538088)
chr4 (457-516)||(11161913-11161972)
chr4 (655-717)||(19362477-19362539)
chr4 (578-623)||(11421007-11421052)
chr4 (330-371)||(20311220-20311261)
[»] scaffold0390 (4 HSPs)
scaffold0390 (407-717)||(6831-7141)
scaffold0390 (407-717)||(13847-14157)
scaffold0390 (313-371)||(14193-14251)
scaffold0390 (315-371)||(7177-7233)
[»] chr8 (41 HSPs)
chr8 (407-717)||(21940665-21940975)
chr8 (413-714)||(6094129-6094430)
chr8 (409-717)||(22171491-22171797)
chr8 (413-717)||(24642655-24642959)
chr8 (409-608)||(28554885-28555084)
chr8 (419-717)||(38232274-38232570)
chr8 (413-540)||(24636860-24636987)
chr8 (503-717)||(14983818-14984030)
chr8 (631-717)||(15326422-15326508)
chr8 (631-717)||(15506791-15506877)
chr8 (437-714)||(32872741-32873019)
chr8 (578-717)||(21969324-21969462)
chr8 (578-717)||(12562114-12562252)
chr8 (428-717)||(2375027-2375321)
chr8 (578-717)||(8371426-8371564)
chr8 (578-717)||(22130782-22130920)
chr8 (578-717)||(25611186-25611324)
chr8 (578-717)||(27007690-27007828)
chr8 (578-717)||(27014833-27014971)
chr8 (578-717)||(27880660-27880798)
chr8 (578-717)||(28020841-28020979)
chr8 (578-717)||(21916667-21916805)
chr8 (578-717)||(18835341-18835479)
chr8 (582-717)||(24797285-24797419)
chr8 (578-717)||(45534446-45534584)
chr8 (313-371)||(21940571-21940629)
chr8 (315-371)||(22070108-22070164)
chr8 (578-717)||(26240475-26240613)
chr8 (314-371)||(6094030-6094087)
chr8 (315-371)||(22171396-22171452)
chr8 (323-367)||(24642564-24642608)
chr8 (588-717)||(22659667-22659795)
chr8 (323-371)||(28554799-28554847)
chr8 (590-684)||(29645537-29645631)
chr8 (445-508)||(10920234-10920297)
chr8 (655-717)||(6430953-6431015)
chr8 (663-717)||(8782048-8782102)
chr8 (655-694)||(36970332-36970371)
chr8 (655-693)||(2963133-2963171)
chr8 (563-661)||(24535471-24535569)
chr8 (661-714)||(34659059-34659112)
[»] chr2 (28 HSPs)
chr2 (407-717)||(21330145-21330455)
chr2 (407-717)||(18796506-18796816)
chr2 (409-717)||(18619807-18620114)
chr2 (441-710)||(36270199-36270469)
chr2 (441-708)||(18822115-18822384)
chr2 (472-710)||(20977957-20978178)
chr2 (569-706)||(22183392-22183528)
chr2 (413-552)||(19692598-19692737)
chr2 (527-717)||(18851956-18852146)
chr2 (564-717)||(19279445-19279598)
chr2 (578-717)||(24250205-24250343)
chr2 (578-717)||(30174368-30174506)
chr2 (582-709)||(6992017-6992146)
chr2 (315-371)||(21330493-21330549)
chr2 (578-717)||(24229388-24229526)
chr2 (593-696)||(36801899-36802003)
chr2 (662-717)||(29800545-29800600)
chr2 (209-311)||(11536142-11536242)
chr2 (244-310)||(14291229-14291293)
chr2 (589-696)||(28741220-28741326)
chr2 (655-717)||(15342175-15342237)
chr2 (578-623)||(12098609-12098654)
chr2 (245-315)||(27905553-27905621)
chr2 (662-716)||(21626824-21626877)
chr2 (578-696)||(24763751-24763868)
chr2 (658-696)||(28718968-28719006)
chr2 (244-290)||(32067103-32067149)
chr2 (266-310)||(22116893-22116935)
[»] scaffold0433 (2 HSPs)
scaffold0433 (407-717)||(7107-7417)
scaffold0433 (315-371)||(7015-7071)
[»] chr5 (41 HSPs)
chr5 (407-717)||(24695363-24695673)
chr5 (409-717)||(19714395-19714703)
chr5 (407-717)||(18569758-18570070)
chr5 (413-717)||(19707115-19707419)
chr5 (413-717)||(22546913-22547217)
chr5 (520-717)||(39538701-39538898)
chr5 (412-667)||(27347425-27347679)
chr5 (473-710)||(18806938-18807175)
chr5 (411-717)||(17285645-17285935)
chr5 (411-715)||(17298798-17299088)
chr5 (407-516)||(39537962-39538071)
chr5 (578-717)||(20941018-20941156)
chr5 (578-717)||(25805558-25805696)
chr5 (578-717)||(31890-32028)
chr5 (578-717)||(23545913-23546051)
chr5 (578-717)||(12789836-12789974)
chr5 (578-717)||(22941241-22941379)
chr5 (413-516)||(31886537-31886640)
chr5 (315-371)||(24695709-24695765)
chr5 (578-717)||(24933479-24933617)
chr5 (313-371)||(19714742-19714800)
chr5 (578-717)||(12765167-12765305)
chr5 (578-717)||(31096807-31096945)
chr5 (314-371)||(27347722-27347779)
chr5 (323-371)||(19707462-19707510)
chr5 (578-717)||(5097642-5097780)
chr5 (578-717)||(7865607-7865745)
chr5 (578-717)||(9811910-9812048)
chr5 (578-717)||(12704051-12704189)
chr5 (433-523)||(33477389-33477479)
chr5 (578-699)||(26245093-26245213)
chr5 (323-371)||(18570108-18570156)
chr5 (209-315)||(39419852-39419956)
chr5 (656-710)||(18829465-18829519)
chr5 (589-717)||(20100416-20100543)
chr5 (220-315)||(22181853-22181946)
chr5 (256-288)||(42410325-42410357)
chr5 (323-370)||(39537878-39537925)
chr5 (457-525)||(11479420-11479489)
chr5 (669-710)||(18806578-18806619)
chr5 (669-710)||(18806758-18806799)
[»] scaffold0186 (2 HSPs)
scaffold0186 (407-717)||(25887-26197)
scaffold0186 (315-370)||(26231-26286)
[»] scaffold0657 (2 HSPs)
scaffold0657 (407-717)||(993-1303)
scaffold0657 (315-371)||(901-957)
[»] scaffold0063 (2 HSPs)
scaffold0063 (409-717)||(5531-5839)
scaffold0063 (323-371)||(5444-5492)
[»] scaffold0008 (3 HSPs)
scaffold0008 (409-590)||(230365-230545)
scaffold0008 (638-717)||(230288-230367)
scaffold0008 (307-371)||(230584-230648)
[»] scaffold0039 (1 HSPs)
scaffold0039 (564-710)||(90019-90166)
[»] scaffold0378 (1 HSPs)
scaffold0378 (578-717)||(8296-8434)
[»] scaffold0112 (1 HSPs)
scaffold0112 (578-717)||(174-312)
[»] scaffold0176 (2 HSPs)
scaffold0176 (407-471)||(8446-8510)
scaffold0176 (315-371)||(8546-8602)
[»] scaffold0264 (1 HSPs)
scaffold0264 (578-717)||(3848-3986)
[»] scaffold0028 (1 HSPs)
scaffold0028 (578-717)||(119721-119859)
[»] scaffold0001 (1 HSPs)
scaffold0001 (578-717)||(130397-130535)
[»] scaffold0203 (1 HSPs)
scaffold0203 (315-371)||(23769-23825)
[»] scaffold0326 (2 HSPs)
scaffold0326 (315-371)||(16523-16579)
scaffold0326 (407-440)||(16615-16648)
[»] scaffold0006 (1 HSPs)
scaffold0006 (578-717)||(67547-67685)
[»] scaffold0031 (1 HSPs)
scaffold0031 (587-717)||(40161-40290)
[»] scaffold0466 (1 HSPs)
scaffold0466 (578-717)||(13122-13260)
[»] scaffold0637 (1 HSPs)
scaffold0637 (314-371)||(8943-9000)
[»] scaffold0705 (1 HSPs)
scaffold0705 (315-371)||(41-97)
[»] scaffold0111 (1 HSPs)
scaffold0111 (655-714)||(26609-26668)
[»] scaffold0565 (2 HSPs)
scaffold0565 (323-371)||(10202-10250)
scaffold0565 (426-457)||(10127-10158)
[»] scaffold0767 (1 HSPs)
scaffold0767 (313-351)||(1-39)
[»] scaffold0032 (1 HSPs)
scaffold0032 (436-672)||(92194-92432)
[»] scaffold0376 (1 HSPs)
scaffold0376 (662-717)||(11703-11758)
[»] scaffold0136 (1 HSPs)
scaffold0136 (664-715)||(8807-8858)
[»] scaffold0118 (1 HSPs)
scaffold0118 (626-718)||(45956-46052)
[»] scaffold0034 (1 HSPs)
scaffold0034 (662-717)||(83188-83243)
[»] scaffold0393 (1 HSPs)
scaffold0393 (578-623)||(15089-15134)
[»] scaffold0170 (1 HSPs)
scaffold0170 (330-367)||(5893-5930)


Alignment Details
Target: chr3 (Bit Score: 307; Significance: 1e-172; HSPs: 67)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 307; E-Value: 1e-172
Query Start/End: Original strand, 407 - 717
Target Start/End: Original strand, 6110064 - 6110374
Alignment:
Q  407 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 506  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6110064 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 6110163  T
Q  507 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 606  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6110164 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 6110263  T
Q  607 ctgatgatcacatctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagtaatatttatattggattgatccgccatga 706  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6110264 ctgatgatcacatctcacagatcatggataaagagttatcaagtcttcacatagatataaatattaggagtaatatttatattggattgatccgccatga 6110363  T
Q  707 gaatactacat 717  Q
    |||||||||||    
T  6110364 gaatactacat 6110374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 307; E-Value: 1e-172
Query Start/End: Original strand, 407 - 717
Target Start/End: Complemental strand, 10572799 - 10572489
Alignment:
Q  407 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 506  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10572799 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 10572700  T
Q  507 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 606  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10572699 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 10572600  T
Q  607 ctgatgatcacatctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagtaatatttatattggattgatccgccatga 706  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10572599 ctgatgatcacatctcacagatcatggataaagagttatcaagtcttcacatagatataaatattaggagtaatatttatattggattgatccgccatga 10572500  T
Q  707 gaatactacat 717  Q
    |||||||||||    
T  10572499 gaatactacat 10572489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 303; E-Value: 1e-170
Query Start/End: Original strand, 407 - 717
Target Start/End: Complemental strand, 15601091 - 15600781
Alignment:
Q  407 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 506  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15601091 acaagacatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 15600992  T
Q  507 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 606  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15600991 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 15600892  T
Q  607 ctgatgatcacatctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagtaatatttatattggattgatccgccatga 706  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15600891 ctgatgatcacatctcacagatcatggataaagagttatcaagtcttcacatagatataaatattaggagtaatatttatattggattgatccgccatga 15600792  T
Q  707 gaatactacat 717  Q
    |||||||||||    
T  15600791 gaatactacat 15600781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 303; E-Value: 1e-170
Query Start/End: Original strand, 407 - 717
Target Start/End: Complemental strand, 15607636 - 15607326
Alignment:
Q  407 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 506  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15607636 acaagacatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 15607537  T
Q  507 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 606  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15607536 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 15607437  T
Q  607 ctgatgatcacatctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagtaatatttatattggattgatccgccatga 706  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15607436 ctgatgatcacatctcacagatcatggataaagagttatcaagtcttcacatagatataaatattaggagtaatatttatattggattgatccgccatga 15607337  T
Q  707 gaatactacat 717  Q
    |||||||||||    
T  15607336 gaatactacat 15607326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 297; E-Value: 1e-166
Query Start/End: Original strand, 409 - 717
Target Start/End: Complemental strand, 16482688 - 16482380
Alignment:
Q  409 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 508  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16482688 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 16482589  T
Q  509 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagact 608  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16482588 cccattaaacataaggaaactactctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 16482489  T
Q  609 gatgatcacatctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagtaatatttatattggattgatccgccatgaga 708  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16482488 gatgatcacatctcacagatcatggataaagagttatcaagtcttcacatagatataaatattaggagtaatatttatattggattgatccgccatgaga 16482389  T
Q  709 atactacat 717  Q
    |||||||||    
T  16482388 atactacat 16482380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 293; E-Value: 1e-164
Query Start/End: Original strand, 413 - 717
Target Start/End: Complemental strand, 10579556 - 10579252
Alignment:
Q  413 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacccca 512  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  10579556 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgttaaatggaacattaagtataacttaattgtgagacccca 10579457  T
Q  513 ttaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatg 612  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  10579456 ttaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgagatatcattaaagcatagagactattatgtaggtagactgatg 10579357  T
Q  613 atcacatctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagtaatatttatattggattgatccgccatgagaatac 712  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10579356 atcacatctcacagatcatggataaagagttatcaagtcttcacatagatataaatattaggagtaatatttatattggattgatccgccatgagaatac 10579257  T
Q  713 tacat 717  Q
    |||||    
T  10579256 tacat 10579252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 292; E-Value: 1e-163
Query Start/End: Original strand, 410 - 717
Target Start/End: Original strand, 13211305 - 13211612
Alignment:
Q  410 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 509  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13211305 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 13211404  T
Q  510 ccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagactg 609  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  13211405 ccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgagatatcattaaagcatagagactattatgtaggtagactg 13211504  T
Q  610 atgatcacatctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagtaatatttatattggattgatccgccatgagaa 709  Q
    ||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13211505 atgatcacaactcacagatcatggataaagagttatcaagtcttcacatagatataaatattaggagtaatatttatattggattgatccgccatgagaa 13211604  T
Q  710 tactacat 717  Q
    || |||||    
T  13211605 tattacat 13211612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 289; E-Value: 1e-162
Query Start/End: Original strand, 413 - 717
Target Start/End: Complemental strand, 17781319 - 17781015
Alignment:
Q  413 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacccca 512  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17781319 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacccca 17781220  T
Q  513 ttaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatg 612  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17781219 ttaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatg 17781120  T
Q  613 atcacatctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagtaatatttatattggattgatccgccatgagaatac 712  Q
    ||||||||||||| ||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17781119 atcacatctcacaaatcatagataaagagttatcaagtcttcacatagatataaatattaggagtaatatttatattggattgatccgccatgagaatac 17781020  T
Q  713 tacat 717  Q
    |||||    
T  17781019 tacat 17781015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 289; E-Value: 1e-162
Query Start/End: Original strand, 409 - 717
Target Start/End: Original strand, 18522665 - 18522973
Alignment:
Q  409 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 508  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18522665 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 18522764  T
Q  509 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagact 608  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||    
T  18522765 cccattaaacataaggaaactattcttaaagtatccgtagtcaagctttattgagaagtgggatatcatttaagcatagagactattatgtaggtagact 18522864  T
Q  609 gatgatcacatctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagtaatatttatattggattgatccgccatgaga 708  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  18522865 gatgatcacatctcacagatcatggataaagagttatcaagtcttcacatagatataaatattaggagtaatatttatattggattgatccgccatgaaa 18522964  T
Q  709 atactacat 717  Q
    |||||||||    
T  18522965 atactacat 18522973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 287; E-Value: 1e-160
Query Start/End: Original strand, 407 - 717
Target Start/End: Original strand, 13248607 - 13248917
Alignment:
Q  407 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 506  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13248607 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 13248706  T
Q  507 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 606  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  13248707 accccattaaacataaggaaactattctcaaagtattcgtagtcaagctttgttgagaagtgggataacattaaagcatagagactattatgtaggtaga 13248806  T
Q  607 ctgatgatcacatctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagtaatatttatattggattgatccgccatga 706  Q
    |||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  13248807 ctgatgatcacaactcacagatcatggataaagagttatcaagtcttcacatagatataaatattaggagtaatatttatattggattgattcgccatga 13248906  T
Q  707 gaatactacat 717  Q
    ||||| |||||    
T  13248907 gaatattacat 13248917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 280; E-Value: 1e-156
Query Start/End: Original strand, 407 - 717
Target Start/End: Original strand, 8490488 - 8490805
Alignment:
Q  407 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 506  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  8490488 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgag 8490587  T
Q  507 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagact-------attatgt 599  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||       |||||||    
T  8490588 accccattaaacataaggaaactattctcaaagtatctgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactacagacgattatgt 8490687  T
Q  600 aggtagactgatgatcacatctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagtaatatttatattggattgatcc 699  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8490688 aggtagactgatgatcacatctcacagatcatggataaagagttatcaagtcttcacatagatataaatattaggagtaatatttatattggattgatcc 8490787  T
Q  700 gccatgagaatactacat 717  Q
    ||||||||||||||||||    
T  8490788 gccatgagaatactacat 8490805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 279; E-Value: 1e-156
Query Start/End: Original strand, 407 - 717
Target Start/End: Complemental strand, 15357793 - 15357483
Alignment:
Q  407 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 506  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  15357793 acaagacatttctttattgattttgttttgtttcaaaataataaagtccctagattagttagtccgtttaatggaacattaagtataacttaattgtgag 15357694  T
Q  507 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 606  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  15357693 accccattaaacataaggaacctattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaaacatagagactattatgtaggtaga 15357594  T
Q  607 ctgatgatcacatctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagtaatatttatattggattgatccgccatga 706  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||    
T  15357593 ctgatgatcacatctcacagatcatggataaagagttatctagtcttcacatagatataaaaattaggagtaatatttatattgggttgatccgccatga 15357494  T
Q  707 gaatactacat 717  Q
    |||||||||||    
T  15357493 gaatactacat 15357483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 275; E-Value: 1e-153
Query Start/End: Original strand, 409 - 717
Target Start/End: Original strand, 18519980 - 18520285
Alignment:
Q  409 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 508  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18519980 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 18520079  T
Q  509 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagact 608  Q
    ||| |||||||||||||||||||||| |||   |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18520080 cccgttaaacataaggaaactattcttaaa---tccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 18520176  T
Q  609 gatgatcacatctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagtaatatttatattggattgatccgccatgaga 708  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  18520177 gatgatcacatctcacagatcatggataaagagttatcaagtcttcacatagatataaatattaggagtaatatttatatttgattgatccgccatgaga 18520276  T
Q  709 atactacat 717  Q
    |||||||||    
T  18520277 atactacat 18520285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 260; E-Value: 1e-144
Query Start/End: Original strand, 426 - 717
Target Start/End: Complemental strand, 15342407 - 15342116
Alignment:
Q  426 attttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccattaaacataagga 525  Q
    ||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15342407 attttgttttgtttcaaaataataaagtccctagaatagtttgttcgtttaatggaacattaagtataacttaattgtgagaccccattaaacataagga 15342308  T
Q  526 aactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgatcacatctcaca 625  Q
    | |||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  15342307 acctattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaaacatagagactattatgtaggtagactgatgatcacatctcaca 15342208  T
Q  626 gatcatggataaagagttatccagtcttcacatagatataaatattaggagtaatatttatattggattgatccgccatgagaatactacat 717  Q
    ||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||    
T  15342207 gatcatggataaagagttatctagtcttcacatagatataaaaattaggagtaatatttatattggattgatccgtcatgagaatactacat 15342116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 258; E-Value: 1e-143
Query Start/End: Original strand, 409 - 714
Target Start/End: Original strand, 13516813 - 13517118
Alignment:
Q  409 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 508  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||    
T  13516813 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttcatggaacattaagtataacttaattgtgagac 13516912  T
Q  509 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagact 608  Q
    ||| |||||||||||||||| ||||| |||||||| ||||||||||||| ||||||||| |||||||||||||||| |||||||||||||| ||||||||    
T  13516913 cccgttaaacataaggaaacgattcttaaagtatctgtagtcaagctttattgagaagtaggatatcattaaagcacagagactattatgtgggtagact 13517012  T
Q  609 gatgatcacatctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagtaatatttatattggattgatccgccatgaga 708  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  13517013 gatgatcacatctcacagatcatggataaagagttatcaagtcttcacatagatataaatattaggagtaatatttatattggattgatcctccatgaga 13517112  T
Q  709 atacta 714  Q
    ||||||    
T  13517113 atacta 13517118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 249; E-Value: 1e-138
Query Start/End: Original strand, 409 - 717
Target Start/End: Complemental strand, 17200389 - 17200081
Alignment:
Q  409 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 508  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  17200389 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgatac 17200290  T
Q  509 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagact 608  Q
    ||| |||||||||| ||||||||||| |||||||||||||| ||||||| |||||| ||| |||||||||||||||||||||||||||||| ||||||||    
T  17200289 ccctttaaacataatgaaactattcttaaagtatccgtagttaagctttattgagatgtgtgatatcattaaagcatagagactattatgtgggtagact 17200190  T
Q  609 gatgatcacatctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagtaatatttatattggattgatccgccatgaga 708  Q
    ||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| ||||| ||||||||||| |||| ||||||    
T  17200189 gatgatcacatctcacagatcgtggataaagagttatcaagtcttcacatagatataaatattaggagtagtatttgtattggattgacccgctatgaga 17200090  T
Q  709 atactacat 717  Q
    |||||||||    
T  17200089 atactacat 17200081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 413 - 717
Target Start/End: Complemental strand, 32057101 - 32056796
Alignment:
Q  413 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacccca 512  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||| ||||| |||||||     
T  32057101 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacatcaagtataactttattgtaagaccccg 32057002  T
Q  513 ttaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatg 612  Q
    |||||||||| ||||||||||| ||||| ||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||| |||||||| |||    
T  32057001 ttaaacataaagaaactattcttaaagtgtccgtagtcaaactttattgagaagtgggatatcattaaagcatagagactattatgtgggtagactaatg 32056902  T
Q  613 atcacatctcacagatcatggataaagagttatccagtcttcacatagatat-aaatattaggagtaatatttatattggattgatccgccatgagaata 711  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||    
T  32056901 atcacatctcacagatcatggataaagagttatcaagtcttcacatagatataaaatattatgagtaatatttatattggattgatccgccatgagaata 32056802  T
Q  712 ctacat 717  Q
    ||||||    
T  32056801 ctacat 32056796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 413 - 717
Target Start/End: Complemental strand, 1647726 - 1647418
Alignment:
Q  413 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataa----cttaattgtgagac 508  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    ||||||||||||||    
T  1647726 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataattaacttaattgtgagac 1647627  T
Q  509 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagact 608  Q
    ||| |||||||||||||||||||| | |||||||||||| ||||||||| |||||||  ||||||| |||||||||||||||||||||||| | ||||||    
T  1647626 cccgttaaacataaggaaactatttttaaagtatccgtaatcaagctttattgagaaaagggatataattaaagcatagagactattatgtggatagact 1647527  T
Q  609 gatgatcacatctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagtaatatttatattggattgatccgccatgaga 708  Q
    |||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||| |||||||| ||||||  ||||||||||    
T  1647526 gatgatcacatctcacagatcatggataaagagttatcaagtctacacatagatataaatattaggagtaatgtttatatttgattgactcgccatgaga 1647427  T
Q  709 atactacat 717  Q
    |||||||||    
T  1647426 atactacat 1647418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 413 - 625
Target Start/End: Complemental strand, 19089946 - 19089734
Alignment:
Q  413 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacccca 512  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||     
T  19089946 catttctttattgattttgttttgtttcaaaataataaagtccctagattagttagtccgtttaatggaacattaagtataacttaattgtgagacccct 19089847  T
Q  513 ttaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatg 612  Q
    |||||||||| ||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  19089846 ttaaacataatgaaactattcttaaagtatccgtagtcaagctttattgagaagtgggatatcattaaatcatagagactattatgtaggtagactgatg 19089747  T
Q  613 atcacatctcaca 625  Q
    |||||||||||||    
T  19089746 atcacatctcaca 19089734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 407 - 713
Target Start/End: Original strand, 29924971 - 29925277
Alignment:
Q  407 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 506  Q
    ||||| |||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||  ||||||||||| |||||||||||    
T  29924971 acaagacatttctttattgattttgttttgtttcaaaataataaagcccctaaaatagttagtccgtttaatggattattaagtataatttaattgtgag 29925070  T
Q  507 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 606  Q
    ||||||||||| ||||||| | |||||| ||| |||  ||||||||||||| ||| |||||| |||||||||||||||| ||| ||||||||| | ||||    
T  29925071 accccattaaatataaggacattattcttaaaatatatgtagtcaagctttattgtgaagtgagatatcattaaagcatggaggctattatgtggataga 29925170  T
Q  607 ctgatgatcacatctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagtaatatttatattggattgatccgccatga 706  Q
      ||||||||||||||| |||||||||||||||||| ||  ||||||||||||||||||||||||||||||||||||||||||||||||| || ||  ||    
T  29925171 tcgatgatcacatctcatagatcatggataaagagtcattaagtcttcacatagatataaatattaggagtaatatttatattggattgacccacctaga 29925270  T
Q  707 gaatact 713  Q
    |||||||    
T  29925271 gaatact 29925277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 407 - 713
Target Start/End: Original strand, 29974124 - 29974430
Alignment:
Q  407 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 506  Q
    ||||| |||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||  ||||||||||| |||||||||||    
T  29974124 acaagacatttctttattgattttgttttgtttcaaaataataaagcccctaaaatagttagtccgtttaatggattattaagtataatttaattgtgag 29974223  T
Q  507 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 606  Q
    ||||||||||| ||||||| | |||||| ||| |||  ||||||||||||| ||| |||||| |||||||||||||||| ||| ||||||||| | ||||    
T  29974224 accccattaaatataaggacattattcttaaaatatatgtagtcaagctttattgtgaagtgagatatcattaaagcatggaggctattatgtggataga 29974323  T
Q  607 ctgatgatcacatctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagtaatatttatattggattgatccgccatga 706  Q
      ||||||||||||||| |||||||||||||||||| ||  ||||||||||||||||||||||||||||||||||||||||||||||||| || ||  ||    
T  29974324 tcgatgatcacatctcatagatcatggataaagagtcattaagtcttcacatagatataaatattaggagtaatatttatattggattgacccacctaga 29974423  T
Q  707 gaatact 713  Q
    |||||||    
T  29974424 gaatact 29974430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 169; E-Value: 3e-90
Query Start/End: Original strand, 409 - 717
Target Start/End: Original strand, 16200434 - 16200740
Alignment:
Q  409 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 508  Q
    ||||||||||||  ||| |||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  16200434 aaggcatttcttcgttg-ttttattttgtttcaaaataataaagtccttagaatagttagtccgtttaatggaacattatgtataacttaattgtgagac 16200532  T
Q  509 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagact 608  Q
     ||| |||||||||||| | |||||| ||||||| |||||||||| ||| ||| |||||||||| ||||||||||||  |||||||| ||| |  |||||    
T  16200533 tccaataaacataaggacattattcttaaagtattcgtagtcaagatttattgtgaagtgggatgtcattaaagcatgaagactatt-tgtggagagact 16200631  T
Q  609 gatgatcacatctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagtaatatttatattggattgatccgccatgaga 708  Q
    |||||||| |||| |||||||||||||||||| ||||| ||| |||| ||||||| |||||||||| |||||||| |||||||||||| || ||||||||    
T  16200632 gatgatcatatcttacagatcatggataaagaattatcaagtattcatatagatacaaatattaggtgtaatattcatattggattgacccaccatgaga 16200731  T
Q  709 atactacat 717  Q
    |||||||||    
T  16200732 atactacat 16200740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 154; E-Value: 3e-81
Query Start/End: Original strand, 407 - 568
Target Start/End: Complemental strand, 18640953 - 18640792
Alignment:
Q  407 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 506  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  18640953 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgag 18640854  T
Q  507 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtg 568  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  18640853 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtg 18640792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 150; E-Value: 6e-79
Query Start/End: Original strand, 513 - 717
Target Start/End: Original strand, 17136465 - 17136663
Alignment:
Q  513 ttaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatg 612  Q
    |||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||| ||||||||||||    
T  17136465 ttaaacataaggaaactattcttaaagtatccgtagtcaagctttattgagaagtgggatatcattaaaacatagagactattatgtgggtagactgatg 17136564  T
Q  613 atcacatctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagtaatatttatattggattgatccgccatgagaatac 712  Q
    ||||||| |||||||||||||||||||||||||| |||||||||||||      |||||||||||||||||||||||||||||| || ||||||||||||    
T  17136565 atcacatttcacagatcatggataaagagttatcaagtcttcacatag------atattaggagtaatatttatattggattgacccaccatgagaatac 17136658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 146; E-Value: 2e-76
Query Start/End: Original strand, 409 - 646
Target Start/End: Original strand, 16200128 - 16200363
Alignment:
Q  409 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 508  Q
    ||||||||||||  ||| |||| |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  16200128 aaggcatttcttcgttg-ttttattttgtttcaaaataataaagtccttagaatagttagttcgtttaatggaacattatgtataacttaattgtgagac 16200226  T
Q  509 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagact 608  Q
    ||||||||||||||||| | |||||| ||||||| |||||||||| ||| ||| ||||||||||||||||||||||| ||||||||| ||| |  |||||    
T  16200227 cccattaaacataaggacattattcttaaagtattcgtagtcaagatttattgtgaagtgggatatcattaaagcatggagactatt-tgtggagagact 16200325  T
Q  609 gatgatcacatctcacagatcatggataaagagttatc 646  Q
    |||||||| |||| ||||||||||||||||||||||||    
T  16200326 gatgatcatatcttacagatcatggataaagagttatc 16200363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 135; E-Value: 6e-70
Query Start/End: Original strand, 414 - 711
Target Start/End: Complemental strand, 24253589 - 24253291
Alignment:
Q  414 atttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgaga-cccca 512  Q
    ||||||||||||||||||||||  |||||||||||||||||| |||||||| | || ||||| |||||||||||||||| ||||||| |||||| |||||    
T  24253589 atttctttattgattttgttttacttcaaaataataaagtccttagaatagctcgttcgtttgatggaacattaagtatgacttaatcgtgagatcccca 24253490  T
Q  513 ttaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatg 612  Q
    | ||||||||||| |||||||| |||||||  || |||||  ||| |||  ||||| | || ||||||||||||||||||||||||| |||||||| |||    
T  24253489 tcaaacataaggacactattcttaaagtatatgtggtcaaaatttattgtaaagtgaggtaacattaaagcatagagactattatgtcggtagactaatg 24253390  T
Q  613 atcacatctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagtaatatttatattggattgatccgccatgagaata 711  Q
    |||| |||||||  || ||||||||||||||||| ||| ||||||||  |||||| |||| |||| ||||||||||||| |||| || |||||||||||    
T  24253389 atcatatctcacgaattatggataaagagttatcaagttttcacatacttataaacattaagagttatatttatattggtttgaccctccatgagaata 24253291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 578 - 717
Target Start/End: Complemental strand, 15846847 - 15846709
Alignment:
Q  578 taaagcatagagactattatgtaggtagactgatgatcacatctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagt 677  Q
    |||||| | |||||||||||||| |||||||||||| | |||||||  | |||| ||||  ||| |||| |||||  |||||||||||||||||||||||    
T  15846847 taaagcgtcgagactattatgtatgtagactgatgaccgcatctcatgggtcatagatat-gagatatcaagtctatacatagatataaatattaggagt 15846749  T
Q  678 aatatttatattggattgatccgccatgagaatactacat 717  Q
    ||||||||||||||||||| || || ||||||||||||||    
T  15846748 aatatttatattggattgacccaccgtgagaatactacat 15846709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 578 - 717
Target Start/End: Original strand, 21034229 - 21034367
Alignment:
Q  578 taaagcatagagactattatgtaggtagactgatgatcacatctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagt 677  Q
    |||||| | |||||||||||||| |||||||||||| | |||||||  | |||| ||||  ||| |||| |||||  |||||||||||||||||||||||    
T  21034229 taaagcgtcgagactattatgtatgtagactgatgaccgcatctcatgggtcatagatat-gagatatcaagtctatacatagatataaatattaggagt 21034327  T
Q  678 aatatttatattggattgatccgccatgagaatactacat 717  Q
    ||||||||||||||||||| || || ||||||||||||||    
T  21034328 aatatttatattggattgacccaccgtgagaatactacat 21034367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 587 - 717
Target Start/End: Original strand, 14890391 - 14890520
Alignment:
Q  587 gagactattatgtaggtagactgatgatcacatctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagtaatatttat 686  Q
    |||||||||||||| |||||||||||| | |||||||  | |||| ||||  ||| |||| |||||  ||||||||||||||||||||||||||||||||    
T  14890391 gagactattatgtatgtagactgatgaccgcatctcatgggtcatagatat-gagatatcaagtctatacatagatataaatattaggagtaatatttat 14890489  T
Q  687 attggattgatccgccatgagaatactacat 717  Q
    |||||||||| || || ||||||||||||||    
T  14890490 attggattgacccaccgtgagaatactacat 14890520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 578 - 717
Target Start/End: Complemental strand, 20147865 - 20147727
Alignment:
Q  578 taaagcatagagactattatgtaggtagactgatgatcacatctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagt 677  Q
    |||||| | |||||||||||||| |||||||||||| | |||||||  | |||| ||||  ||| |||| |||||  |||||||||||||||||||||||    
T  20147865 taaagcgtcgagactattatgtatgtagactgatgaccgcatctcatgggtcatagatat-gagatatcaagtctatacatagatataaatattaggagt 20147767  T
Q  678 aatatttatattggattgatccgccatgagaatactacat 717  Q
    ||||||||||||||||||| || |  ||||||||||||||    
T  20147766 aatatttatattggattgacccactgtgagaatactacat 20147727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 409 - 471
Target Start/End: Original strand, 18534758 - 18534820
Alignment:
Q  409 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtcc 471  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  18534758 aaggcatttctttattgattttgttttgtttcaaaataataaagtccatagaatagttagtcc 18534820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 313 - 371
Target Start/End: Original strand, 8490394 - 8490452
Alignment:
Q  313 actgttgggataagccctaatagccaatctatattgattgggtttggctttgtatcatg 371  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8490394 actgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 8490452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 587 - 717
Target Start/End: Original strand, 21398792 - 21398921
Alignment:
Q  587 gagactattatgtaggtagactgatgatcacatctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagtaatatttat 686  Q
    |||||||||||||| ||||||| |||| | |||||||  | |||| ||||  ||| |||| |||||  |||||| |||||||||||||||||||||||||    
T  21398792 gagactattatgtatgtagacttatgacctcatctcatgggtcatagatat-gagatatcaagtctatacataggtataaatattaggagtaatatttat 21398890  T
Q  687 attggattgatccgccatgagaatactacat 717  Q
    |||||||||| || || ||||||||||||||    
T  21398891 attggattgacccaccgtgagaatactacat 21398921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 315 - 371
Target Start/End: Original strand, 6109972 - 6110028
Alignment:
Q  315 tgttgggataagccctaatagccaatctatattgattgggtttggctttgtatcatg 371  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6109972 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 6110028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 315 - 371
Target Start/End: Original strand, 13248515 - 13248571
Alignment:
Q  315 tgttgggataagccctaatagccaatctatattgattgggtttggctttgtatcatg 371  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13248515 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 13248571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 578 - 717
Target Start/End: Original strand, 55427012 - 55427150
Alignment:
Q  578 taaagcatagagactattatgtaggtagactgatgatcacatctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagt 677  Q
    |||||| | |||||||||||||| |||||||||||| | |||||||  | |||| ||||  ||| |||  |||||  ||||||||||||||||||| |||    
T  55427012 taaagcgtcgagactattatgtatgtagactgatgaccgcatctcatgggtcatagatat-gagatattaagtctatacatagatataaatattagaagt 55427110  T
Q  678 aatatttatattggattgatccgccatgagaatactacat 717  Q
    ||||||||||||||||||| || |  ||||||||||||||    
T  55427111 aatatttatattggattgacccactgtgagaatactacat 55427150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 314 - 371
Target Start/End: Complemental strand, 18641046 - 18640989
Alignment:
Q  314 ctgttgggataagccctaatagccaatctatattgattgggtttggctttgtatcatg 371  Q
    ||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  18641046 ctgttggaataagccctaatagccaatctatattgattgtgtttggctttgtatcatg 18640989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 315 - 371
Target Start/End: Original strand, 13211211 - 13211267
Alignment:
Q  315 tgttgggataagccctaatagccaatctatattgattgggtttggctttgtatcatg 371  Q
    |||||| |||||||||||||||||||||||||||||||||||||| |||||||||||    
T  13211211 tgttggaataagccctaatagccaatctatattgattgggtttggttttgtatcatg 13211267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 578 - 717
Target Start/End: Original strand, 12299902 - 12300039
Alignment:
Q  578 taaagcatagagactattatgtaggtagactgatgatcacatctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagt 677  Q
    |||||| | |||||||||||||| |||||||||||| | |||||||  | |||| ||||  ||| |||| |||||   ||||||||||||| ||||||||    
T  12299902 taaagcgtcgagactattatgtatgtagactgatgaccgcatctcatgggtcatagatat-gagatatcaagtctat-catagatataaatgttaggagt 12299999  T
Q  678 aatatttatattggattgatccgccatgagaatactacat 717  Q
    ||||||||||||||||||| || |  ||||||||||||||    
T  12300000 aatatttatattggattgacccactgtgagaatactacat 12300039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 578 - 717
Target Start/End: Original strand, 14147012 - 14147150
Alignment:
Q  578 taaagcatagagactattatgtaggtagactgatgatcacatctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagt 677  Q
    ||||||| |||||||||||| || |||||||||||| |||||||||  | |||||||||  ||| |||  |||||  |||||  |||||||||||||||     
T  14147012 taaagcacagagactattatatatgtagactgatgaccacatctcatgggtcatggatat-gagatattaagtctatacatatgtataaatattaggagg 14147110  T
Q  678 aatatttatattggattgatccgccatgagaatactacat 717  Q
    |||||||||| |||||||| | ||| ||||||| ||||||    
T  14147111 aatatttatactggattgacctgccgtgagaatgctacat 14147150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 409 - 454
Target Start/End: Original strand, 18510924 - 18510969
Alignment:
Q  409 aaggcatttctttattgattttgttttgtttcaaaataataaagtc 454  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  18510924 aaggcatttctttattgattttgttttgtttcaaaataataaagtc 18510969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 313 - 365
Target Start/End: Complemental strand, 10579655 - 10579603
Alignment:
Q  313 actgttgggataagccctaatagccaatctatattgattgggtttggctttgt 365  Q
    |||||||| ||||||||||||||||||||||||||||||||||||| ||||||    
T  10579655 actgttggaataagccctaatagccaatctatattgattgggtttgactttgt 10579603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 323 - 371
Target Start/End: Original strand, 17136145 - 17136193
Alignment:
Q  323 taagccctaatagccaatctatattgattgggtttggctttgtatcatg 371  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||    
T  17136145 taagccctaatagccaatctatattgattgagtttggctttgtatcatg 17136193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 570 - 672
Target Start/End: Original strand, 9504446 - 9504548
Alignment:
Q  570 gatatcattaaagcatagagactattatgtaggtagactgatgatcacatctcacagatcatggataaagagttatccagtcttcacatagatataaata 669  Q
    |||||| |||||| ||||| |||||||||| ||||||||||| |||  ||||||| | |||||||||| |||||||| ||| || ||||| ||| |||||    
T  9504446 gatatctttaaaggatagaaactattatgtgggtagactgataatcttatctcacgggtcatggataaggagttatcaagtattaacatacataaaaata 9504545  T
Q  670 tta 672  Q
    |||    
T  9504546 tta 9504548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 313 - 371
Target Start/End: Complemental strand, 16482784 - 16482727
Alignment:
Q  313 actgttgggataagccctaatagccaatctatattgattgggtttggctttgtatcatg 371  Q
    |||||| | ||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  16482784 actgttagaataagccctaata-ccaatctatattgattgggtttggctttgtatcatg 16482727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 315 - 371
Target Start/End: Complemental strand, 15607729 - 15607672
Alignment:
Q  315 tgttgggataagccctaatagccaatctata-ttgattgggtttggctttgtatcatg 371  Q
    |||||| |||||||||||||||||||||||| || |||||||||||||||||||||||    
T  15607729 tgttggaataagccctaatagccaatctatattttattgggtttggctttgtatcatg 15607672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 244 - 315
Target Start/End: Original strand, 12840202 - 12840271
Alignment:
Q  244 aatttcaataactattcctcatatgtttcctcttaatcgattgtatatactttttatgcctcagatacaact 315  Q
    ||||||||||||||||||||| ||| |||||||||||| ||||  |||||||||||||||||| ||| ||||    
T  12840202 aatttcaataactattcctcaaatgcttcctcttaatcaattg--tatactttttatgcctcaaatataact 12840271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 315 - 371
Target Start/End: Complemental strand, 15351293 - 15351237
Alignment:
Q  315 tgttgggataagccctaatagccaatctatattgattgggtttggctttgtatcatg 371  Q
    |||||| |||||||||||||||||||||||| ||||||  |||||||||||||||||    
T  15351293 tgttggaataagccctaatagccaatctataatgattgattttggctttgtatcatg 15351237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 315 - 371
Target Start/End: Complemental strand, 15357885 - 15357829
Alignment:
Q  315 tgttgggataagccctaatagccaatctatattgattgggtttggctttgtatcatg 371  Q
    |||||| |||||||||||||||||||||||| ||||||  |||||||||||||||||    
T  15357885 tgttggaataagccctaatagccaatctataatgattgattttggctttgtatcatg 15357829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 323 - 371
Target Start/End: Complemental strand, 17200475 - 17200427
Alignment:
Q  323 taagccctaatagccaatctatattgattgggtttggctttgtatcatg 371  Q
    |||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  17200475 taagccctaatagccaatctatgttgattgggtttggctttgtagcatg 17200427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 323 - 371
Target Start/End: Original strand, 18519893 - 18519941
Alignment:
Q  323 taagccctaatagccaatctatattgattgggtttggctttgtatcatg 371  Q
    |||| |||||||||||||||||||||||||||||||| |||||||||||    
T  18519893 taagtcctaatagccaatctatattgattgggtttggttttgtatcatg 18519941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 315 - 365
Target Start/End: Complemental strand, 10572890 - 10572840
Alignment:
Q  315 tgttgggataagccctaatagccaatctatattgattgggtttggctttgt 365  Q
    |||||| |||||||||||||||||| |||||||||||||||||| ||||||    
T  10572890 tgttggaataagccctaatagccaacctatattgattgggtttgactttgt 10572840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 655 - 717
Target Start/End: Original strand, 11787654 - 11787716
Alignment:
Q  655 acatagatataaatattaggagtaatatttatattggattgatccgccatgagaatactacat 717  Q
    |||||| |||||||||||||||||||||||||| ||||| || || || ||||||||||||||    
T  11787654 acataggtataaatattaggagtaatatttatactggatagacccaccgtgagaatactacat 11787716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 315 - 371
Target Start/End: Complemental strand, 15601184 - 15601127
Alignment:
Q  315 tgttgggataagccctaatagccaatctata-ttgattgggtttggctttgtatcatg 371  Q
    |||||| |||||||||||||||||||||||| || ||||||||||| |||||||||||    
T  15601184 tgttggaataagccctaatagccaatctatattttattgggtttggatttgtatcatg 15601127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 323 - 371
Target Start/End: Complemental strand, 1647816 - 1647768
Alignment:
Q  323 taagccctaatagccaatctatattgattgggtttggctttgtatcatg 371  Q
    ||||||||||||||   ||||||||||||||||||||||||||||||||    
T  1647816 taagccctaatagctggtctatattgattgggtttggctttgtatcatg 1647768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 323 - 371
Target Start/End: Original strand, 13516727 - 13516775
Alignment:
Q  323 taagccctaatagccaatctatattgattgggtttggctttgtatcatg 371  Q
    |||||||||||||||||||||| ||||||| |||||||| |||||||||    
T  13516727 taagccctaatagccaatctatgttgattgagtttggctgtgtatcatg 13516775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 323 - 371
Target Start/End: Complemental strand, 17781406 - 17781358
Alignment:
Q  323 taagccctaatagccaatctatattgattgggtttggctttgtatcatg 371  Q
    |||||||||||||||||||||||||||||| |||||| ||| |||||||    
T  17781406 taagccctaatagccaatctatattgattgagtttggttttatatcatg 17781358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 323 - 371
Target Start/End: Original strand, 18534671 - 18534719
Alignment:
Q  323 taagccctaatagccaatctatattgattgggtttggctttgtatcatg 371  Q
    ||||||||||||| |||||||||||||||| |||||| |||||||||||    
T  18534671 taagccctaatagtcaatctatattgattgagtttggttttgtatcatg 18534719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 323 - 371
Target Start/End: Complemental strand, 19090033 - 19089985
Alignment:
Q  323 taagccctaatagccaatctatattgattgggtttggctttgtatcatg 371  Q
    |||||||||||||||||||||||||||||| |||||| ||| |||||||    
T  19090033 taagccctaatagccaatctatattgattgagtttggttttatatcatg 19089985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 323 - 371
Target Start/End: Complemental strand, 32057192 - 32057144
Alignment:
Q  323 taagccctaatagccaatctatattgattgggtttggctttgtatcatg 371  Q
    ||||| |||||||||||||||| ||||||||||||| ||||||||||||    
T  32057192 taagctctaatagccaatctatgttgattgggtttgactttgtatcatg 32057144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 583 - 698
Target Start/End: Complemental strand, 8252048 - 8251933
Alignment:
Q  583 catagagactattatgtaggtagactgatgatcacatctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagtaatat 682  Q
    |||| ||||||| |||| | | |||||| |||||||||| || ||||||| |||||  |||||| | |||| ||||| || || |||||  |||||||||    
T  8252048 catatagactatcatgtggatggactgaagatcacatcttacggatcatgaataaaatgttatcaaatctttacataaatttacatatttcgagtaatat 8251949  T
Q  683 ttatattggattgatc 698  Q
    ||||||| ||||||||    
T  8251948 ttatatttgattgatc 8251933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 494 - 633
Target Start/End: Original strand, 19345656 - 19345795
Alignment:
Q  494 acttaattgtgagaccccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagacta 593  Q
    ||||||| ||||||| |||||||  ||||| | |||||||| |||| ||||  | | ||| ||  ||| ||||||| ||| ||||||||| || |||  |    
T  19345656 acttaatcgtgagactccattaattataagaacactattcttaaagaatcctcaattaaggttcattgtgaagtggtataacattaaagcgtaaagatca 19345755  T
Q  594 ttatgtaggtagactgatgatcacatctcacagatcatgg 633  Q
    |||||| |||| |||||||||||| ||||| |||||||||    
T  19345756 ttatgtgggtatactgatgatcacgtctcatagatcatgg 19345795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 655 - 717
Target Start/End: Complemental strand, 15317408 - 15317346
Alignment:
Q  655 acatagatataaatattaggagtaatatttatattggattgatccgccatgagaatactacat 717  Q
    |||||| |||||||||||||||||||||||||| | ||| || || || ||||||||||||||    
T  15317408 acataggtataaatattaggagtaatatttatactagatagacccaccgtgagaatactacat 15317346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 655 - 717
Target Start/End: Complemental strand, 25978963 - 25978901
Alignment:
Q  655 acatagatataaatattaggagtaatatttatattggattgatccgccatgagaatactacat 717  Q
    |||||| ||||| |||||||||||||||||||| ||||| || || || ||||||||||||||    
T  25978963 acataggtataattattaggagtaatatttatactggatagacccaccgtgagaatactacat 25978901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 209 - 285
Target Start/End: Original strand, 14031973 - 14032049
Alignment:
Q  209 actgaatcaatatagatagagttgcgctgagactaaatttcaataactattcctcatatgtttcctcttaatcgatt 285  Q
    |||||||||||||||||| |||||   |  || | ||||||||||||||||||| ||||| ||| ||||||||||||    
T  14031973 actgaatcaatatagataaagttgttttaggattgaatttcaataactattccttatatggttcatcttaatcgatt 14032049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 323 - 371
Target Start/End: Original strand, 18510837 - 18510885
Alignment:
Q  323 taagccctaatagccaatctatattgattgggtttggctttgtatcatg 371  Q
    |||||||||||| ||||||||||||||||| |||||  |||||||||||    
T  18510837 taagccctaatatccaatctatattgattgagtttgattttgtatcatg 18510885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 323 - 371
Target Start/End: Original strand, 18522578 - 18522626
Alignment:
Q  323 taagccctaatagccaatctatattgattgggtttggctttgtatcatg 371  Q
    |||||||||||| ||||||||||||||||| |||||  |||||||||||    
T  18522578 taagccctaatatccaatctatattgattgagtttgattttgtatcatg 18522626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234 (Bit Score: 303; Significance: 1e-170; HSPs: 4)
Name: scaffold0234
Description:

Target: scaffold0234; HSP #1
Raw Score: 303; E-Value: 1e-170
Query Start/End: Original strand, 407 - 717
Target Start/End: Complemental strand, 2528 - 2218
Alignment:
Q  407 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 506  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2528 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 2429  T
Q  507 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 606  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  2428 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 2329  T
Q  607 ctgatgatcacatctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagtaatatttatattggattgatccgccatga 706  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2328 ctgatgatcacatctcacagatcatggataaagagttatcaagtcttcacatagatataaatattaggagtaatatttatattggattgatccgccatga 2229  T
Q  707 gaatactacat 717  Q
    |||||||||||    
T  2228 gaatactacat 2218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234; HSP #2
Raw Score: 303; E-Value: 1e-170
Query Start/End: Original strand, 407 - 717
Target Start/End: Complemental strand, 11419 - 11109
Alignment:
Q  407 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 506  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11419 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 11320  T
Q  507 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 606  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  11319 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 11220  T
Q  607 ctgatgatcacatctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagtaatatttatattggattgatccgccatga 706  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11219 ctgatgatcacatctcacagatcatggataaagagttatcaagtcttcacatagatataaatattaggagtaatatttatattggattgatccgccatga 11120  T
Q  707 gaatactacat 717  Q
    |||||||||||    
T  11119 gaatactacat 11109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234; HSP #3
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 315 - 371
Target Start/End: Complemental strand, 2620 - 2564
Alignment:
Q  315 tgttgggataagccctaatagccaatctatattgattgggtttggctttgtatcatg 371  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2620 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 2564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234; HSP #4
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 315 - 371
Target Start/End: Complemental strand, 11511 - 11455
Alignment:
Q  315 tgttgggataagccctaatagccaatctatattgattgggtttggctttgtatcatg 371  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11511 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 11455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 303; Significance: 1e-170; HSPs: 45)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 303; E-Value: 1e-170
Query Start/End: Original strand, 407 - 717
Target Start/End: Original strand, 18252030 - 18252340
Alignment:
Q  407 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 506  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18252030 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 18252129  T
Q  507 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 606  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  18252130 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 18252229  T
Q  607 ctgatgatcacatctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagtaatatttatattggattgatccgccatga 706  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18252230 ctgatgatcacatctcacagatcatggataaagagttatcaagtcttcacatagatataaatattaggagtaatatttatattggattgatccgccatga 18252329  T
Q  707 gaatactacat 717  Q
    |||||||||||    
T  18252330 gaatactacat 18252340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 299; E-Value: 1e-168
Query Start/End: Original strand, 407 - 717
Target Start/End: Complemental strand, 18532721 - 18532411
Alignment:
Q  407 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 506  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  18532721 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagttcgtttaatggaacattaagtataacttaattgtgag 18532622  T
Q  507 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 606  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  18532621 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtagataga 18532522  T
Q  607 ctgatgatcacatctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagtaatatttatattggattgatccgccatga 706  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18532521 ctgatgatcacatctcacagatcatggataaagagttatcaagtcttcacatagatataaatattaggagtaatatttatattggattgatccgccatga 18532422  T
Q  707 gaatactacat 717  Q
    |||||||||||    
T  18532421 gaatactacat 18532411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 291; E-Value: 1e-163
Query Start/End: Original strand, 407 - 717
Target Start/End: Complemental strand, 27131616 - 27131306
Alignment:
Q  407 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 506  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27131616 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 27131517  T
Q  507 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 606  Q
    ||||||||||||||||||||||||||||||||||||  ||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||    
T  27131516 accccattaaacataaggaaactattctcaaagtatttgtagtcaagctttattgagaagtgggatatcattaaagcataaagactattatgtaggtaga 27131417  T
Q  607 ctgatgatcacatctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagtaatatttatattggattgatccgccatga 706  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27131416 ctgatgatcacatctcacagatcatggataaagagttatcaagtcttcacatagatataaatattaggagtaatatttatattggattgatccgccatga 27131317  T
Q  707 gaatactacat 717  Q
    |||||||||||    
T  27131316 gaatactacat 27131306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 265; E-Value: 1e-147
Query Start/End: Original strand, 409 - 717
Target Start/End: Complemental strand, 21171438 - 21171130
Alignment:
Q  409 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 508  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||| |||||||||||||||||||    
T  21171438 aaggcatttctttattgattttgttttgtttcaaaataataaagtccttagaatagttagtccgtttcatggaacattaaatataacttaattgtgagac 21171339  T
Q  509 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagact 608  Q
    ||| || ||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||| ||||||||    
T  21171338 cccgttgaacataaggaaactattcttaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcataaagactattatgtgggtagact 21171239  T
Q  609 gatgatcacatctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagtaatatttatattggattgatccgccatgaga 708  Q
    |||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21171238 gatgataacatctcacagatcatggataaagagttatcaagtcttcacatagatataaatattaggagtaatatttatattggattgatccgccatgaga 21171139  T
Q  709 atactacat 717  Q
    |||||||||    
T  21171138 atactacat 21171130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 261; E-Value: 1e-145
Query Start/End: Original strand, 409 - 717
Target Start/End: Complemental strand, 27310782 - 27310474
Alignment:
Q  409 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 508  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27310782 aaggcatttctttattgattttgttttgtttcaaaataataaagtccttagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 27310683  T
Q  509 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagact 608  Q
    | | || ||||||||||||||||||| |||||||| ||||||||||||| ||||||||||| ||||||||||||||||||||||||||||| ||||||||    
T  27310682 cacgttgaacataaggaaactattcttaaagtatcagtagtcaagctttattgagaagtggaatatcattaaagcatagagactattatgtgggtagact 27310583  T
Q  609 gatgatcacatctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagtaatatttatattggattgatccgccatgaga 708  Q
    |||||||||||||||||||| ||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  27310582 gatgatcacatctcacagattatggataaagagttatcaagtcttcacataaatataaatattaggagtaatatttatattggattgatccgccatgaga 27310483  T
Q  709 atactacat 717  Q
    |||||||||    
T  27310482 atactacat 27310474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 253; E-Value: 1e-140
Query Start/End: Original strand, 409 - 717
Target Start/End: Complemental strand, 16359240 - 16358932
Alignment:
Q  409 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 508  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  16359240 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagaataacttaattgtgagac 16359141  T
Q  509 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagact 608  Q
    ||| |||||||||||||||||||||| |||||| || |||||||||||| ||||||| ||| ||||||||||||||||||||||||||||| ||||||||    
T  16359140 cccgttaaacataaggaaactattcttaaagtaaccctagtcaagctttattgagaaatggaatatcattaaagcatagagactattatgtgggtagact 16359041  T
Q  609 gatgatcacatctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagtaatatttatattggattgatccgccatgaga 708  Q
    |||||||||||||||||||| ||||||||||||||||| || |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  16359040 gatgatcacatctcacagataatggataaagagttatcaagccttcacatagatataaatattatgagtaatatttatattggattgatccgccatgaga 16358941  T
Q  709 atactacat 717  Q
    |||||||||    
T  16358940 atactacat 16358932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 233; E-Value: 1e-128
Query Start/End: Original strand, 413 - 717
Target Start/End: Complemental strand, 36816834 - 36816530
Alignment:
Q  413 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacccca 512  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||||||||||||| ||||||||||||| ||     
T  36816834 catttctttattgattttgttttgtttcaaaataatgaagtccctagaatagttcgtctgtttaatggaacattaagtataaattaattgtgagactccg 36816735  T
Q  513 ttaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatg 612  Q
    ||||||||||||| | |||||| ||||||||| |||||||||||| ||||||||||||||| ||||||||||||||||||||||||| | ||||||||||    
T  36816734 ttaaacataaggacattattcttaaagtatccatagtcaagctttattgagaagtgggataccattaaagcatagagactattatgtggatagactgatg 36816635  T
Q  613 atcacatctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagtaatatttatattggattgatccgccatgagaatac 712  Q
    |||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||    
T  36816634 atcacatctcacagatcatggataaagagttatcaagtctacacatagatataaatattaggagtaatatttatattggattgacccaccatgagaatac 36816535  T
Q  713 tacat 717  Q
    |||||    
T  36816534 tacat 36816530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 407 - 717
Target Start/End: Complemental strand, 3856126 - 3855816
Alignment:
Q  407 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 506  Q
    ||||||||||||||| || |||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  3856126 acaaggcatttctttgtttattttgttttgtttcaaaataacaaagtccctagaatagttagcccgtttaatggaacattaagtataacttaattgtgag 3856027  T
Q  507 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 606  Q
    ||||||||||||||||||| | |||||| ||| |||  |||||||| |||| ||| |||||||||||| |||||||||| |||||||||| || ||||||    
T  3856026 accccattaaacataaggacattattcttaaaatatttgtagtcaaactttattgtgaagtgggatattattaaagcatggagactattacgtgggtaga 3855927  T
Q  607 ctgatgatcacatctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagtaatatttatattggattgatccgccatga 706  Q
    ||||||||||||||||||| |||||||||||||||||||  ||||||||||||| ||||||||||||||||||||||||||||||||||| |||| ||||    
T  3855926 ctgatgatcacatctcacaaatcatggataaagagttataaagtcttcacataggtataaatattaggagtaatatttatattggattgacccgcaatga 3855827  T
Q  707 gaatactacat 717  Q
    |||||||||||    
T  3855826 gaatactacat 3855816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 188; E-Value: 1e-101
Query Start/End: Original strand, 407 - 717
Target Start/End: Complemental strand, 22657429 - 22657118
Alignment:
Q  407 acaaggcatttctttattgatttt-gttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtga 505  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||| ||||||||||||||||    
T  22657429 acaagacatttctttattgatttttgttttgtttcaaaataataaagttcctagaatagttagtctgtttaatggaacattaaatataacttaattgtga 22657330  T
Q  506 gaccccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtag 605  Q
    |||||| ||||||||||||| || ||||| ||||| ||  |||||||||||| ||  ||| || ||||||||||||||||||||||||| |||| | |||    
T  22657329 gacccctttaaacataaggacacaattcttaaagtgtctctagtcaagctttattctgaaatgagatatcattaaagcatagagactatcatgtggatag 22657230  T
Q  606 actgatgatcacatctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagtaatatttatattggattgatccgccatg 705  Q
    |||||||||||||||||| || |||| |||||||||||||  ||||||||||||||||||||||||| |||||||||||||||| |||||| || |||||    
T  22657229 actgatgatcacatctcatagctcatagataaagagttattaagtcttcacatagatataaatattatgagtaatatttatattagattgacccaccatg 22657130  T
Q  706 agaatactacat 717  Q
     |||||||||||    
T  22657129 tgaatactacat 22657118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 413 - 711
Target Start/End: Complemental strand, 27277756 - 27277460
Alignment:
Q  413 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacccca 512  Q
    ||||||||| ||| |||||||||||||||||||||||| |||||||||||| ||||||| ||||| ||| ||||| || | ||||||| | ||||||       
T  27277756 catttctttgttgtttttgttttgtttcaaaataataacgtccctagaataattagtccatttaacggagcatta-gtgtgacttaatcgcgagacctt- 27277659  T
Q  513 ttaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatg 612  Q
    |||| |  || || | |||||| |||||||||||||||| ||||| ||| |||  |||||| ||||||||||||||||||||||||| ||||||| ||||    
T  27277658 ttaaccgaaatgacattattcttaaagtatccgtagtcaggctttattgtgaaaagggataacattaaagcatagagactattatgtgggtagaccgatg 27277559  T
Q  613 atcacatctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagtaatatttatattggattgatccgccatgagaata 711  Q
    |||||||||||| |||||| ||||||||||||||  || ||||||||| |||||||||||||||||||||||||| | |||||| || |||| ||||||    
T  27277558 atcacatctcacggatcatagataaagagttatcatgttttcacataggtataaatattaggagtaatatttatactagattgacccaccataagaata 27277460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 441 - 710
Target Start/End: Complemental strand, 12014457 - 12014188
Alignment:
Q  441 aaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccattaaacataaggaaactattctcaaagt 540  Q
    |||||||||||||| ||||||||  ||||||||||||||||| ||||||| ||| ||||| || ||| |||||||||||||| ||   |||||| |||      
T  12014457 aaaataataaagtcactagaatacatagtccgtttaatggaatattaagtgtaaattaatcgttagatcccattaaacataatgatgttattcttaaaac 12014358  T
Q  541 atccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgatcacatctcacagatcatggataaaga 640  Q
    ||||||||| |||||||  || |||| ||||||  |||||||| || |||| ||||||| |||||| ||||||||||||||||| |||||| ||||| ||    
T  12014357 atccgtagttaagctttagtgtgaagagggatacgattaaagcgtaaagaccattatgtgggtagaatgatgatcacatctcacggatcattgataagga 12014258  T
Q  641 gttatccagtcttcacatagatataaatattaggagtaatatttatattggattgatccgccatgagaat 710  Q
    |||||| |||||||||||| |||||||||||| |||||||||| |||||||||||| ||| |||||||||    
T  12014257 gttatcaagtcttcacataaatataaatattaagagtaatattaatattggattgacccggcatgagaat 12014188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 419 - 696
Target Start/End: Complemental strand, 9918106 - 9917837
Alignment:
Q  419 tttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccattaaac 518  Q
    |||||||||||||||||||| ||||||||||||||| ||       |||||  ||||||| |||||||||||||||||| ||   ||||  ||||||||     
T  9918106 tttattgattttgttttgttacaaaataataaagtcactt------ttagtttgtttaatcgaacattaagtataacttgatcacgaga-tccattaaat 9918014  T
Q  519 ataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgatcaca 618  Q
    ||||||| | |||||| ||| ||||  |||| ||||||| |||  |||||||||| |||| ||||||||||| || ||||| |||||  |||||||||||    
T  9918013 ataaggacattattcttaaaatatctatagttaagctttattgttaagtgggatagcattgaagcatagagaatactatgtcggtaggttgatgatcaca 9917914  T
Q  619 tctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagtaatatttatattggattga 696  Q
    ||||   ||||||||||||||||||||| ||||||||||||||||||||||||  |||||||||||||||||||||||    
T  9917913 tctcgtggatcatggataaagagttatcaagtcttcacatagatataaatatt-tgagtaatatttatattggattga 9917837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 441 - 692
Target Start/End: Complemental strand, 12006712 - 12006461
Alignment:
Q  441 aaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccattaaacataaggaaactattctcaaagt 540  Q
    ||||||||||||||||||||||||||||||  |||||||||| ||||||| |  |||||| |||||||||||| ||||||||||| | |||| | |||      
T  12006712 aaaataataaagtccctagaatagttagtctatttaatggaatattaagtgtgccttaatcgtgagaccccatgaaacataaggacattattattaaaac 12006613  T
Q  541 atccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgatcacatctcacagatcatggataaaga 640  Q
    || ||||||||||| ||  || |||| |||||| ||||||| | |||||| | ||||||   |||||||||||||||| || ||  ||||| ||||| ||    
T  12006612 attcgtagtcaagccttagtgtgaagagggataacattaaaacttagagattgttatgtgcatagactgatgatcacaacttacgaatcattgataagga 12006513  T
Q  641 gttatccagtcttcacatagatataaatattaggagtaatatttatattgga 692  Q
    |||||| ||| ||| || |||||||||||||| |||||||||||||| ||||    
T  12006512 gttatcaagtgttcgcacagatataaatattaagagtaatatttatactgga 12006461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 563 - 716
Target Start/End: Original strand, 23507056 - 23507209
Alignment:
Q  563 gaagtgggatatcattaaagcatagagactattatgtaggtagactgatgatcacatctcacagatcatggataaagagttatccagtcttcacatagat 662  Q
    ||||||||||| |||||||| ||| ||| ||| | || | |||||||||||||||||||||| |||||||||||| |||||||| ||| |||||||||||    
T  23507056 gaagtgggatagcattaaagtatatagaatataaggtggatagactgatgatcacatctcacggatcatggataaggagttatcaagttttcacatagat 23507155  T
Q  663 ataaatattaggagtaatatttatattggattgatccgccatgagaatactaca 716  Q
    ||||||| |||||||||||||||||||||||| | || |||| ||||| |||||    
T  23507156 ataaataataggagtaatatttatattggattaacccaccattagaatgctaca 23507209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 578 - 717
Target Start/End: Complemental strand, 19706750 - 19706612
Alignment:
Q  578 taaagcatagagactattatgtaggtagactgatgatcacatctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagt 677  Q
    |||||| | |||||||||||||| |||||||||||| | |||||||  | |||| ||||  ||| |||| |||||  |||||||||||||||||||||||    
T  19706750 taaagcgtcgagactattatgtatgtagactgatgaccgcatctcatgggtcatagatat-gagatatcaagtctatacatagatataaatattaggagt 19706652  T
Q  678 aatatttatattggattgatccgccatgagaatactacat 717  Q
    ||||||||||||||||||| || || ||||||||||||||    
T  19706651 aatatttatattggattgacccaccgtgagaatactacat 19706612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 578 - 717
Target Start/End: Complemental strand, 28135034 - 28134896
Alignment:
Q  578 taaagcatagagactattatgtaggtagactgatgatcacatctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagt 677  Q
    |||||| | ||||| |||||||| |||||||||||| | |||||||  | |||| ||||  ||| |||| |||||  |||||||||||||||||||||||    
T  28135034 taaagcgtcgagacaattatgtatgtagactgatgaccgcatctcatgggtcatagatat-gagatatcaagtctatacatagatataaatattaggagt 28134936  T
Q  678 aatatttatattggattgatccgccatgagaatactacat 717  Q
    |||||||||||||||||||||| || ||||||||||||||    
T  28134935 aatatttatattggattgatccaccgtgagaatactacat 28134896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 578 - 717
Target Start/End: Complemental strand, 43802676 - 43802538
Alignment:
Q  578 taaagcatagagactattatgtaggtagactgatgatcacatctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagt 677  Q
    |||||| | |||||||||||||| |||||||||||| | |||||||  | |||| ||||  ||| |||| |||||  |||||||||||||||||||||||    
T  43802676 taaagcgtcgagactattatgtatgtagactgatgaccgcatctcatgggtcatagatat-gagatatcaagtctatacatagatataaatattaggagt 43802578  T
Q  678 aatatttatattggattgatccgccatgagaatactacat 717  Q
    ||||||||||||||||||| || || ||||||||||||||    
T  43802577 aatatttatattggattgacccaccgtgagaatactacat 43802538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 578 - 717
Target Start/End: Original strand, 9456107 - 9456245
Alignment:
Q  578 taaagcatagagactattatgtaggtagactgatgatcacatctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagt 677  Q
    |||||| | |||||||||||||| |||||||||||| | |||||||  | |||| ||||  ||| |||| |||||  |||||||||||||||||||||||    
T  9456107 taaagcgtcgagactattatgtatgtagactgatgaccgcatctcatgggtcatagatat-gagatatcaagtctatacatagatataaatattaggagt 9456205  T
Q  678 aatatttatattggattgatccgccatgagaatactacat 717  Q
    ||||||||||||||||||| || |  ||||||||||||||    
T  9456206 aatatttatattggattgacccactgtgagaatactacat 9456245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 578 - 717
Target Start/End: Complemental strand, 20779956 - 20779818
Alignment:
Q  578 taaagcatagagactattatgtaggtagactgatgatcacatctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagt 677  Q
    |||||| | |||||||||||||| |||||||||||| | |||||||  | |||| ||||  ||| |||| |||||  |||||||||||||||||||||||    
T  20779956 taaagcgtcgagactattatgtatgtagactgatgaccgcatctcatgggtcatagatat-gagatatcaagtctatacatagatataaatattaggagt 20779858  T
Q  678 aatatttatattggattgatccgccatgagaatactacat 717  Q
    ||||||||||||||||||| || |  ||||||||||||||    
T  20779857 aatatttatattggattgacccactgtgagaatactacat 20779818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 578 - 717
Target Start/End: Complemental strand, 22670568 - 22670430
Alignment:
Q  578 taaagcatagagactattatgtaggtagactgatgatcacatctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagt 677  Q
    |||||| | |||||||||||||| |||||||||||| | |||||||  | |||| ||||  ||| |||| |||||  |||||||||||||||||||||||    
T  22670568 taaagcgtcgagactattatgtatgtagactgatgaccgcatctcatgggtcatagatat-gagatatcaagtctatacatagatataaatattaggagt 22670470  T
Q  678 aatatttatattggattgatccgccatgagaatactacat 717  Q
    ||||||||||||||||||| || |  ||||||||||||||    
T  22670469 aatatttatattggattgacccactgtgagaatactacat 22670430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 578 - 717
Target Start/End: Complemental strand, 42817300 - 42817162
Alignment:
Q  578 taaagcatagagactattatgtaggtagactgatgatcacatctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagt 677  Q
    |||||| | |||||||||||||| |||||||||||| | |||||||  | |||| ||||  ||| |||| |||||  |||||||||||||||||||||||    
T  42817300 taaagcgtcgagactattatgtatgtagactgatgaccgcatctcatgggtcatagatat-gagatatcaagtctatacatagatataaatattaggagt 42817202  T
Q  678 aatatttatattggattgatccgccatgagaatactacat 717  Q
    ||||||||||||||||||| || |  ||||||||||||||    
T  42817201 aatatttatattggattgacccactgtgagaatactacat 42817162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 578 - 717
Target Start/End: Complemental strand, 20391550 - 20391412
Alignment:
Q  578 taaagcatagagactattatgtaggtagactgatgatcacatctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagt 677  Q
    |||||| | |||||||||||||| |||||||||||| | |||||||  | |||| ||||  ||| |||| |||||  |||||||||||||| ||||||||    
T  20391550 taaagcgtcgagactattatgtatgtagactgatgaccgcatctcatgggtcatagatat-gagatatcaagtctatacatagatataaatgttaggagt 20391452  T
Q  678 aatatttatattggattgatccgccatgagaatactacat 717  Q
    ||||||||||||||||||| || |  ||||||||||||||    
T  20391451 aatatttatattggattgacccactgtgagaatactacat 20391412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 315 - 371
Target Start/End: Original strand, 18251936 - 18251992
Alignment:
Q  315 tgttgggataagccctaatagccaatctatattgattgggtttggctttgtatcatg 371  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18251936 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 18251992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 315 - 371
Target Start/End: Complemental strand, 18532813 - 18532757
Alignment:
Q  315 tgttgggataagccctaatagccaatctatattgattgggtttggctttgtatcatg 371  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18532813 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 18532757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 578 - 717
Target Start/End: Original strand, 22612483 - 22612621
Alignment:
Q  578 taaagcatagagactattatgtaggtagactgatgatcacatctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagt 677  Q
    |||||| | |||||||||||||| |||||||||||| | |||||||  | |||| ||||  ||  |||| |||||  ||||||||||||||||| |||||    
T  22612483 taaagcgtcgagactattatgtatgtagactgatgaccgcatctcatgggtcatagatat-gatatatcaagtctatacatagatataaatattgggagt 22612581  T
Q  678 aatatttatattggattgatccgccatgagaatactacat 717  Q
    ||||||| ||||||||||| || || ||||||||||||||    
T  22612582 aatatttttattggattgacccaccgtgagaatactacat 22612621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 578 - 696
Target Start/End: Complemental strand, 47667785 - 47667668
Alignment:
Q  578 taaagcatagagactattatgtaggtagactgatgatcacatctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagt 677  Q
    |||||| | |||||||||||||| |||||||||||| | |||||||  | |||| ||||  ||| |||| |||||  |||||||||||||||||| ||||    
T  47667785 taaagcgtcgagactattatgtatgtagactgatgaccgcatctcatgggtcatagatat-gagatatcaagtctatacatagatataaatattatgagt 47667687  T
Q  678 aatatttatattggattga 696  Q
    |||||||||||||||||||    
T  47667686 aatatttatattggattga 47667668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 578 - 717
Target Start/End: Original strand, 35930573 - 35930711
Alignment:
Q  578 taaagcatagagactattatgtaggtagactgatgatcacatctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagt 677  Q
    |||||| | ||||||||||||||  ||||||||||| | |||||||  | |||| ||||  ||| |||  |||||  |||||| ||||||||||||||||    
T  35930573 taaagcgtcgagactattatgtatatagactgatgaccgcatctcatgggtcatagatat-gagatattaagtctatacataggtataaatattaggagt 35930671  T
Q  678 aatatttatattggattgatccgccatgagaatactacat 717  Q
    ||||||||||||||||||| |  || ||||||||||||||    
T  35930672 aatatttatattggattgacctaccgtgagaatactacat 35930711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 613 - 709
Target Start/End: Complemental strand, 22641871 - 22641778
Alignment:
Q  613 atcacatctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagtaatatttatattggattgatccgccatgagaa 709  Q
    ||||||||||| |||||||||||||||||||||  ||| ||||||||||||||   ||||||| ||||||||||| | |||||| || |||||||||    
T  22641871 atcacatctcatagatcatggataaagagttattaagtgttcacatagatata---attaggaataatatttatactagattgacccaccatgagaa 22641778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 314 - 371
Target Start/End: Complemental strand, 27310878 - 27310821
Alignment:
Q  314 ctgttgggataagccctaatagccaatctatattgattgggtttggctttgtatcatg 371  Q
    |||||||  |||||||||||||||||||||||||||||| ||||||||||||||||||    
T  27310878 ctgttggagtaagccctaatagccaatctatattgattgagtttggctttgtatcatg 27310821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 587 - 717
Target Start/End: Original strand, 633934 - 634063
Alignment:
Q  587 gagactattatgtaggtagactgatgatcacatctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagtaatatttat 686  Q
    |||||||||||||| |||||||||||| | |||||||  | |||| | ||  ||| |||  |||||  |||||| |||||||||||||||||||||||||    
T  633934 gagactattatgtatgtagactgatgaccgcatctcatgggtcatagctat-gagatattaagtctatacataggtataaatattaggagtaatatttat 634032  T
Q  687 attggattgatccgccatgagaatactacat 717  Q
    | |||||| | || || ||||||||||||||    
T  634033 actggattaacccaccgtgagaatactacat 634063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 314 - 371
Target Start/End: Complemental strand, 16359337 - 16359280
Alignment:
Q  314 ctgttgggataagccctaatagccaatctatattgattgggtttggctttgtatcatg 371  Q
    |||||||  |||||||||||||||||||||||||||||||||| || |||||||||||    
T  16359337 ctgttggagtaagccctaatagccaatctatattgattgggttaggatttgtatcatg 16359280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 662 - 715
Target Start/End: Original strand, 51997353 - 51997406
Alignment:
Q  662 tataaatattaggagtaatatttatattggattgatccgccatgagaatactac 715  Q
    |||||||||||||||||||||||||||| |||||| || |||||||||||||||    
T  51997353 tataaatattaggagtaatatttatattagattgacccaccatgagaatactac 51997406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 662 - 717
Target Start/End: Original strand, 8727741 - 8727796
Alignment:
Q  662 tataaatattaggagtaatatttatattggattgatccgccatgagaatactacat 717  Q
    |||||||||||| ||||||||||||| ||||||||||| || ||||||||||||||    
T  8727741 tataaatattagaagtaatatttatactggattgatccaccgtgagaatactacat 8727796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 211 - 272
Target Start/End: Original strand, 15304320 - 15304381
Alignment:
Q  211 tgaatcaatatagatagagttgcgctgagactaaatttcaataactattcctcatatgtttc 272  Q
    |||||||||||||||||||||| | || || | |||||||||||||||| ||||||||||||    
T  15304320 tgaatcaatatagatagagttgtgttgggattgaatttcaataactatttctcatatgtttc 15304381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 413 - 482
Target Start/End: Complemental strand, 30720694 - 30720625
Alignment:
Q  413 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaa 482  Q
    ||||| ||||||| |||| |||||||| ||||||||||||| ||| ||||| ||||| ||||||||||||    
T  30720694 catttttttattggttttattttgttttaaaataataaagttcctggaataattagttcgtttaatggaa 30720625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 323 - 368
Target Start/End: Complemental strand, 36816926 - 36816881
Alignment:
Q  323 taagccctaatagccaatctatattgattgggtttggctttgtatc 368  Q
    ||||||||||||  ||||||||||||||||||||||||||||||||    
T  36816926 taagccctaatattcaatctatattgattgggtttggctttgtatc 36816881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 323 - 371
Target Start/End: Complemental strand, 21171527 - 21171479
Alignment:
Q  323 taagccctaatagccaatctatattgattgggtttggctttgtatcatg 371  Q
    ||||| |||||||||||||||||| ||||| ||||||||||||||||||    
T  21171527 taagctctaatagccaatctatatggattgagtttggctttgtatcatg 21171479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 70 - 121
Target Start/End: Original strand, 15308021 - 15308072
Alignment:
Q  70 ggtaagtattccagttttcatcaaacaaataagaatatcgtatccacagaga 121  Q
    ||||||||| |||||||| ||||||||||||| |||||| ||||||||||||    
T  15308021 ggtaagtatgccagtttttatcaaacaaataaaaatatcatatccacagaga 15308072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 595 - 717
Target Start/End: Complemental strand, 26923678 - 26923557
Alignment:
Q  595 tatgtaggtagactgatgatcacatctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagtaatatttatattggatt 694  Q
    |||||| |||||||||||| |||||||||  | |||| ||||  ||| |||  |||||  |||| | ||| |||||||||||||||||||||| || |||    
T  26923678 tatgtatgtagactgatgaccacatctcatgggtcatagatat-gagatattaagtctatacattggtatgaatattaggagtaatatttatactgaatt 26923580  T
Q  695 gatccgccatgagaatactacat 717  Q
    || || || ||||||||||||||    
T  26923579 gacccaccgtgagaatactacat 26923557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 437 - 514
Target Start/End: Original strand, 3403248 - 3403325
Alignment:
Q  437 tttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccatt 514  Q
    ||||||| ||||||||||  || ||||||||||| | ||||||||| ||||||| | |||||| ||||||||| ||||    
T  3403248 tttcaaagtaataaagtctataaaatagttagtctgattaatggaatattaagtgtgacttaaatgtgagaccacatt 3403325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 437 - 514
Target Start/End: Complemental strand, 3443571 - 3443494
Alignment:
Q  437 tttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccatt 514  Q
    ||||||| ||||||||||  || ||||||||||| | ||||||||| ||||||| | |||||| ||||||||| ||||    
T  3443571 tttcaaagtaataaagtctataaaatagttagtctgattaatggaatattaagtgtgacttaaatgtgagaccacatt 3443494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 326 - 371
Target Start/End: Complemental strand, 3856209 - 3856164
Alignment:
Q  326 gccctaatagccaatctatattgattgggtttggctttgtatcatg 371  Q
    |||||||||||||||| || ||||||||||||| ||||||||||||    
T  3856209 gccctaatagccaatccatcttgattgggtttgactttgtatcatg 3856164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 313 - 371
Target Start/End: Complemental strand, 27131706 - 27131652
Alignment:
Q  313 actgttgggataagccctaatagccaatctatattgattgggtttggctttgtatcatg 371  Q
    |||||||| |||||||||||||||||||||||     ||||||||||||||||||||||    
T  27131706 actgttggaataagccctaatagccaatctat----gttgggtttggctttgtatcatg 27131652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 323 - 367
Target Start/End: Complemental strand, 22657513 - 22657469
Alignment:
Q  323 taagccctaatagccaatctatattgattgggtttggctttgtat 367  Q
    |||||| ||||||||||| ||||||||||| ||||||||||||||    
T  22657513 taagccttaatagccaatatatattgattgagtttggctttgtat 22657469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 655 - 717
Target Start/End: Original strand, 29096789 - 29096851
Alignment:
Q  655 acatagatataaatattaggagtaatatttatattggattgatccgccatgagaatactacat 717  Q
    |||||| |||| ||||||||| ||||||||||| | ||||||||| || || |||||||||||    
T  29096789 acataggtatacatattaggaataatatttatactagattgatccaccgtgtgaatactacat 29096851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 299; Significance: 1e-168; HSPs: 2)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 299; E-Value: 1e-168
Query Start/End: Original strand, 407 - 717
Target Start/End: Original strand, 18288 - 18598
Alignment:
Q  407 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 506  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||    
T  18288 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaattgaacattaagtataacttaattgtgag 18387  T
Q  507 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 606  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18388 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 18487  T
Q  607 ctgatgatcacatctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagtaatatttatattggattgatccgccatga 706  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18488 ctgatgatcacatctcacagatcatggataaagagttatcaagtcttcacatagatataaatattaggagtaatatttatattggattgatccgccatga 18587  T
Q  707 gaatactacat 717  Q
    |||||||||||    
T  18588 gaatactacat 18598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220; HSP #2
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 314 - 371
Target Start/End: Original strand, 18195 - 18252
Alignment:
Q  314 ctgttgggataagccctaatagccaatctatattgattgggtttggctttgtatcatg 371  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18195 ctgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 18252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 299; Significance: 1e-168; HSPs: 56)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 299; E-Value: 1e-168
Query Start/End: Original strand, 407 - 717
Target Start/End: Original strand, 29327784 - 29328094
Alignment:
Q  407 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 506  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  29327784 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtcagtttaatggaacattaagtataacttaattgtgag 29327883  T
Q  507 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 606  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  29327884 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 29327983  T
Q  607 ctgatgatcacatctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagtaatatttatattggattgatccgccatga 706  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29327984 ctgatgatcacatctcacagatcatggataaagagttatcaagtcttcacatagatataaatattaggagtaatatttatattggattgatccgccatga 29328083  T
Q  707 gaatactacat 717  Q
    |||||||||||    
T  29328084 gaatactacat 29328094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 295; E-Value: 1e-165
Query Start/End: Original strand, 407 - 717
Target Start/End: Complemental strand, 11536269 - 11535959
Alignment:
Q  407 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 506  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  11536269 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtacaacttaattgtgag 11536170  T
Q  507 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 606  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  11536169 accccattaaacataaggaacctattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 11536070  T
Q  607 ctgatgatcacatctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagtaatatttatattggattgatccgccatga 706  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  11536069 ctgatgatcacatctcacagatcatggataaagagttatccagtcttcacaaagatataaatattaggagtaatatttatattggattgatccgccatga 11535970  T
Q  707 gaatactacat 717  Q
    |||||||||||    
T  11535969 gaatactacat 11535959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 291; E-Value: 1e-163
Query Start/End: Original strand, 407 - 717
Target Start/End: Complemental strand, 11543187 - 11542877
Alignment:
Q  407 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 506  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  11543187 acaatgcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtcag 11543088  T
Q  507 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 606  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  11543087 accccattaaacataaggaacctattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 11542988  T
Q  607 ctgatgatcacatctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagtaatatttatattggattgatccgccatga 706  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11542987 ctgatgatcacatctcacagatcatggataaagagttatctagtcttcacatagatataaatattaggagtaatatttatattggattgatccgccatga 11542888  T
Q  707 gaatactacat 717  Q
    |||||||||||    
T  11542887 gaatactacat 11542877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 281; E-Value: 1e-157
Query Start/End: Original strand, 409 - 717
Target Start/End: Original strand, 15152445 - 15152753
Alignment:
Q  409 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 508  Q
    |||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15152445 aaggcatttctttattgagtttgttttgtttcaaaataataaagttcctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 15152544  T
Q  509 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagact 608  Q
    ||| ||||||||| |||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15152545 cccgttaaacatacggaaactattcttaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 15152644  T
Q  609 gatgatcacatctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagtaatatttatattggattgatccgccatgaga 708  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15152645 gatgatcacatctcacagatcatggataaagagttatcaagtcttcacatagatataaatattaggagtaatatttatattggattgatccgccatgaga 15152744  T
Q  709 atactacat 717  Q
    |||||||||    
T  15152745 atactacat 15152753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 257; E-Value: 1e-143
Query Start/End: Original strand, 409 - 717
Target Start/End: Original strand, 18561009 - 18561317
Alignment:
Q  409 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 508  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||    
T  18561009 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaactgtgagac 18561108  T
Q  509 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagact 608  Q
    ||| |||||||| ||||||||||||| |||||||| ||||||||||||| |||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  18561109 cccgttaaacattaggaaactattcttaaagtatctgtagtcaagctttattgagaggtgggatatcattaaagcatagagactattatgtgggtagact 18561208  T
Q  609 gatgatcacatctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagtaatatttatattggattgatccgccatgaga 708  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| || | ||||||    
T  18561209 gatgatcacatctcacagatcatggataaagagttatcaagtcttcacatagatataaatattaggagtaatatttatattggattgaccctctatgaga 18561308  T
Q  709 atactacat 717  Q
    |||||||||    
T  18561309 atactacat 18561317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 253; E-Value: 1e-140
Query Start/End: Original strand, 409 - 717
Target Start/End: Original strand, 12750828 - 12751136
Alignment:
Q  409 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 508  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  12750828 aaggcatttctttattgattttgttttgtttcaaagtaataaagtccctagaatagttagtccgtttaatgaaacattaagtataacttaattgtgagac 12750927  T
Q  509 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagact 608  Q
    | | |||||||||| ||||||||||| |||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||| | ||||||    
T  12750928 ctcgttaaacataaagaaactattcttaaagtatccgtagtcaagctttattgagaagttggatatcattaaagcatagagactattatgtggatagact 12751027  T
Q  609 gatgatcacatctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagtaatatttatattggattgatccgccatgaga 708  Q
    |||||||||||||||||||||||||||||||||||||| | ||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  12751028 gatgatcacatctcacagatcatggataaagagttatcaattcttctcatagatataaatattatgagtaatatttatattggattgatccgccatgaga 12751127  T
Q  709 atactacat 717  Q
    |||||||||    
T  12751128 atactacat 12751136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 233; E-Value: 1e-128
Query Start/End: Original strand, 413 - 717
Target Start/End: Original strand, 12738542 - 12738846
Alignment:
Q  413 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacccca 512  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||  |||||||| |||||||| ||||||||||||||||||||       
T  12738542 catttctttattgattttattttgtttcaaaataataaagtccctagaatagttagtttgtttaatgaaacattaattataacttaattgtgagaccttg 12738641  T
Q  513 ttaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatg 612  Q
    |||||||||||||||||||||| |||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| |    
T  12738642 ttaaacataaggaaactattcttaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtgggtagactgaag 12738741  T
Q  613 atcacatctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagtaatatttatattggattgatccgccatgagaatac 712  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    ||||||||||||||||||||||||||||||||||||    
T  12738742 atcacatctcacagatcatggataaagagttatcaagtcttcacatagatataaatattactcataatatttatattggattgatccgccatgagaatac 12738841  T
Q  713 tacat 717  Q
    |||||    
T  12738842 tacat 12738846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 409 - 694
Target Start/End: Complemental strand, 18258047 - 18257762
Alignment:
Q  409 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 508  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||| |||||||||||||||    
T  18258047 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaataattagtctgtttaatggaacattaagtatgacttaattgtgagac 18257948  T
Q  509 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagact 608  Q
    ||||||||||| ||||| | |||||| |||||||||||||||||| ||| |||  |||| ||||| || ||| ||||| |||||||||||| | |||| |    
T  18257947 cccattaaacacaaggacattattcttaaagtatccgtagtcaagtttttttgttaagtaggataacaataatgcataaagactattatgtggatagatt 18257848  T
Q  609 gatgatcacatctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagtaatatttatattggatt 694  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  18257847 gatgatcacatctcacagatcatggataaagagttatcaagtcttcacatagatataaatattaggagtaatatttatattggatt 18257762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 188; E-Value: 1e-101
Query Start/End: Original strand, 409 - 628
Target Start/End: Original strand, 15148144 - 15148363
Alignment:
Q  409 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 508  Q
    |||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||| || |||||||||||||||||||||||||||||    
T  15148144 aaggcatttctttattgagtttgttttgtttcaaaataataaagttcctagaatagttagtccgtttgattgaacattaagtataacttaattgtgagac 15148243  T
Q  509 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagact 608  Q
    ||| |||||||||||||||||||||| |||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15148244 cccgttaaacataaggaaactattcttaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 15148343  T
Q  609 gatgatcacatctcacagat 628  Q
    ||||||||||||||||||||    
T  15148344 gatgatcacatctcacagat 15148363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 413 - 717
Target Start/End: Original strand, 13392157 - 13392460
Alignment:
Q  413 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacccca 512  Q
    ||||||||| |||| |||||||||||||||||||||||||| ||||||| | |||||| | |||||||| |||||||| | ||||||| ||||||||| |    
T  13392157 catttctttgttgactttgttttgtttcaaaataataaagttcctagaacaattagtctgcttaatggagcattaagtgtgacttaatcgtgagaccc-a 13392255  T
Q  513 ttaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatg 612  Q
    |||||   ||||| | |||||| ||||||||  ||||||| |||| ||| |||  |||||| ||||||| ||||||||||||| | | ||||||  ||||    
T  13392256 ttaaatgaaaggacattattcttaaagtatcaatagtcaaactttattgtgaaaagggataacattaaaacatagagactattgtattggtagatcgatg 13392355  T
Q  613 atcacatctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagtaatatttatattggattgatccgccatgagaatac 712  Q
    |||||||||||| |||||| ||||||||||||||| ||||||||||||  |||||||||||||| |||||||||| |||||||| || ||||| |||||     
T  13392356 atcacatctcacggatcatagataaagagttatcctgtcttcacataggaataaatattaggagaaatatttatactggattgacccaccatgcgaatat 13392455  T
Q  713 tacat 717  Q
    |||||    
T  13392456 tacat 13392460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 429 - 625
Target Start/End: Original strand, 2364917 - 2365112
Alignment:
Q  429 ttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccattaaacataaggaaac 528  Q
    ||||| |||||||||||||||||||| |||||||| ||||||  | |||||||||||||||| |  |||||| |||||| ||||||||||  || || |     
T  2364917 ttgttatgtttcaaaataataaagtctctagaataattagtctttctaatggaacattaagtgtggcttaatcgtgagaacccattaaactaaatgacat 2365016  T
Q  529 tattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgatcacatctcaca 625  Q
    |||||| ||| ||| ||||||||| | || ||| ||| || |||| ||||||| |||||||||||| |||| ||| |||||||||||||||||||||    
T  2365017 tattcttaaaatattcgtagtcaa-ccttattgtgaaatgagataacattaaaacatagagactatcatgtgggtcgactgatgatcacatctcaca 2365112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 440 - 665
Target Start/End: Original strand, 7396221 - 7396450
Alignment:
Q  440 caaaataataaagtccctagaatagttagtccgtttaa-tggaacattaagtataacttaattgtgagaccccattaaacataaggaaactattctcaaa 538  Q
    |||||||| || ||| |||||||||||||| | ||||| ||||||||||||||| |||||||  |||||||| |||||||||||| ||| |||||| |||    
T  7396221 caaaataaaaatgtcgctagaatagttagttcatttaaatggaacattaagtatgacttaatcttgagaccctattaaacataagaaaattattcttaaa 7396320  T
Q  539 gtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgt---aggtagactgatgatcacatctcacagatcatggat 635  Q
      ||  |||||||||| ||  || ||| |  |||   ||||||||||||||||||||||||    |||  |||||||||||||||||||| |||||| ||    
T  7396321 acatatgtagtcaagccttagtgtgaaatacgatgatattaaagcatagagactattatgtgcagggtgaactgatgatcacatctcacatatcatgaat 7396420  T
Q  636 aaagagttatccagtcttcacatagatata 665  Q
    ||||| ||||| ||| |||||||| |||||    
T  7396421 aaagaattatcaagtattcacataaatata 7396450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 587 - 717
Target Start/End: Original strand, 8464999 - 8465128
Alignment:
Q  587 gagactattatgtaggtagactgatgatcacatctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagtaatatttat 686  Q
    |||||||||||||| |||||||||||| | |||||||  | |||| ||||  ||| |||| |||||  ||||||||||||||||||||||||||||||||    
T  8464999 gagactattatgtatgtagactgatgaccgcatctcatgggtcatagatat-gagatatcaagtctatacatagatataaatattaggagtaatatttat 8465097  T
Q  687 attggattgatccgccatgagaatactacat 717  Q
    |||||||||| || || ||||||||||||||    
T  8465098 attggattgacccaccgtgagaatactacat 8465128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 413 - 687
Target Start/End: Original strand, 39111819 - 39112092
Alignment:
Q  413 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacccca 512  Q
    |||||||||||| |||||||||| |||||||| |||||||||||||||||||  ||||||||||||| |||||||||||  |||||||    ||||  |     
T  39111819 catttctttattaattttgttttatttcaaaa-aataaagtccctagaatagcgagtccgtttaatgaaacattaagtacgacttaatcacaagacatct 39111917  T
Q  513 ttaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatg 612  Q
    ||||||||||||| ||||||   ||| ||| |  |||| |||||| ||| |||  |  ||| |||||||  ||||||||||||||   |||||||| |||    
T  39111918 ttaaacataaggacactatttcaaaaatattcacagtccagctttattgtgaaacgaaataacattaaaatatagagactattataagggtagactaatg 39112017  T
Q  613 atcacatctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagtaatatttata 687  Q
     | | ||| || || |||||||||||||||||     |||||| ||| | |||||||||||||||| ||||||||    
T  39112018 gtaatatcacataggtcatggataaagagttacaatttcttcatatatacataaatattaggagtattatttata 39112092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 578 - 717
Target Start/End: Original strand, 2204543 - 2204681
Alignment:
Q  578 taaagcatagagactattatgtaggtagactgatgatcacatctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagt 677  Q
    |||||| | |||||||||||||| |||||||||||| | |||||||  | |||| ||||  ||| |||| |||||  |||||||||||||||||||||||    
T  2204543 taaagcgtcgagactattatgtatgtagactgatgaccgcatctcatgggtcatagatat-gagatatcaagtctatacatagatataaatattaggagt 2204641  T
Q  678 aatatttatattggattgatccgccatgagaatactacat 717  Q
    ||||||||||||||||||| || |  ||||||||||||||    
T  2204642 aatatttatattggattgacccactgtgagaatactacat 2204681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 578 - 717
Target Start/End: Original strand, 18400095 - 18400233
Alignment:
Q  578 taaagcatagagactattatgtaggtagactgatgatcacatctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagt 677  Q
    |||||| | |||||||||||||| |||||||||||| | |||||||  | |||| ||||  ||| |||| |||||  |||||||||||||||||||||||    
T  18400095 taaagcgtcgagactattatgtatgtagactgatgaccgcatctcatgggtcatagatat-gagatatcaagtctatacatagatataaatattaggagt 18400193  T
Q  678 aatatttatattggattgatccgccatgagaatactacat 717  Q
    ||||||||||||||||||| || |  ||||||||||||||    
T  18400194 aatatttatattggattgacccactgtgagaatactacat 18400233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 578 - 717
Target Start/End: Original strand, 18407079 - 18407217
Alignment:
Q  578 taaagcatagagactattatgtaggtagactgatgatcacatctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagt 677  Q
    |||||| | |||||||||||||| |||||||||||| | |||||||  | |||| ||||  ||| |||| |||||  |||||||||||||||||||||||    
T  18407079 taaagcgtcgagactattatgtatgtagactgatgaccgcatctcatgggtcatagatat-gagatatcaagtctatacatagatataaatattaggagt 18407177  T
Q  678 aatatttatattggattgatccgccatgagaatactacat 717  Q
    ||||||||||||||||||| || |  ||||||||||||||    
T  18407178 aatatttatattggattgacccactgtgagaatactacat 18407217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 578 - 717
Target Start/End: Original strand, 19230879 - 19231017
Alignment:
Q  578 taaagcatagagactattatgtaggtagactgatgatcacatctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagt 677  Q
    |||||| | |||||||||||||| |||||||||||| | |||||||  | |||| ||||  ||| |||| |||||  |||||||||||||||||||||||    
T  19230879 taaagcgtcgagactattatgtatgtagactgatgaccgcatctcatgggtcatagatat-gagatatcaagtctatacatagatataaatattaggagt 19230977  T
Q  678 aatatttatattggattgatccgccatgagaatactacat 717  Q
    |||||||||| |||||||| || || ||||||||||||||    
T  19230978 aatatttatactggattgacccaccgtgagaatactacat 19231017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 578 - 717
Target Start/End: Original strand, 30254129 - 30254267
Alignment:
Q  578 taaagcatagagactattatgtaggtagactgatgatcacatctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagt 677  Q
    |||||| | |||||||||||||| |||||||||||| | |||||||  | |||| ||||  ||| |||| |||||  |||||||||||||||||||||||    
T  30254129 taaagcgtcgagactattatgtatgtagactgatgaccgcatctcatgggtcatagatat-gagatatcaagtctatacatagatataaatattaggagt 30254227  T
Q  678 aatatttatattggattgatccgccatgagaatactacat 717  Q
    ||||||| ||||||||||| || || ||||||||||||||    
T  30254228 aatatttgtattggattgacccaccgtgagaatactacat 30254267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 578 - 717
Target Start/End: Complemental strand, 48808807 - 48808669
Alignment:
Q  578 taaagcatagagactattatgtaggtagactgatgatcacatctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagt 677  Q
    |||||| | |||||||||||||| |||||||||||| | |||||||  | |||| ||||  ||| |||| |||||  |||||||||||||||||||||||    
T  48808807 taaagcgtcgagactattatgtatgtagactgatgaccgcatctcatgggtcatagatat-gagatatcaagtctatacatagatataaatattaggagt 48808709  T
Q  678 aatatttatattggattgatccgccatgagaatactacat 717  Q
    ||||||||||||||||||| || |  ||||||||||||||    
T  48808708 aatatttatattggattgacccactgtgagaatactacat 48808669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 606 - 710
Target Start/End: Original strand, 10235361 - 10235465
Alignment:
Q  606 actgatgatcacatctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagtaatatttatattggattgatccgccatg 705  Q
    |||||||||||||||||||||||||| ||||||||||||||  || ||| ||||  |||||||||||||| |||||||||||| |||||||  | |||||    
T  10235361 actgatgatcacatctcacagatcattgataaagagttatcaggtgttcccatatgtataaatattaggaataatatttatatcggattgactcaccatg 10235460  T
Q  706 agaat 710  Q
    |||||    
T  10235461 agaat 10235465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 578 - 717
Target Start/End: Original strand, 15729742 - 15729880
Alignment:
Q  578 taaagcatagagactattatgtaggtagactgatgatcacatctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagt 677  Q
    |||||| | |||||||||||||| |||||||||||| | |||||||  | |||| ||||  ||| |||  |||||  ||||||||||||||||||| |||    
T  15729742 taaagcgtcgagactattatgtatgtagactgatgaccgcatctcatgggtcatagatat-gagatattaagtctatacatagatataaatattagaagt 15729840  T
Q  678 aatatttatattggattgatccgccatgagaatactacat 717  Q
    ||||||||||||||||||| || |  ||||||||||||||    
T  15729841 aatatttatattggattgacccactgtgagaatactacat 15729880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 578 - 717
Target Start/End: Complemental strand, 18139649 - 18139511
Alignment:
Q  578 taaagcatagagactattatgtaggtagactgatgatcacatctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagt 677  Q
    |||||| | |||||||||||||| |||||||||||| | |||||||  | |||| ||||  ||| ||||  ||||  |||||||||||||||||||||||    
T  18139649 taaagcgtcgagactattatgtatgtagactgatgaccgcatctcatgggtcatagatat-gagatatcaggtctatacatagatataaatattaggagt 18139551  T
Q  678 aatatttatattggattgatccgccatgagaatactacat 717  Q
    ||||||| ||||||||||| || |  ||||||||||||||    
T  18139550 aatatttgtattggattgacccactgtgagaatactacat 18139511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 545 - 710
Target Start/End: Complemental strand, 7662733 - 7662569
Alignment:
Q  545 gtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgatcacatctcacagatcatggataaagagtta 644  Q
    ||||||||| |||  || ||||| ||||| |||||||| | |  || |||||||| | || ||||||||||| |||| ||  |||||| ||||| | |||    
T  7662733 gtagtcaagatttagtgtgaagtaggatagcattaaagtacattgattattatgtggatacactgatgatcatatcttacgaatcatgtataaaaactta 7662634  T
Q  645 tccagtcttcacatagatataaatattaggagtaatatttatattggattgatccgccatgagaat 710  Q
    || |||||||||||||||||||| ||||  |||||||||| |||| |||||| |||||||||||||    
T  7662633 tcaagtcttcacatagatataaa-attataagtaatatttttattagattgacccgccatgagaat 7662569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 315 - 371
Target Start/End: Complemental strand, 2653331 - 2653275
Alignment:
Q  315 tgttgggataagccctaatagccaatctatattgattgggtttggctttgtatcatg 371  Q
    |||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  2653331 tgttggaataagccctaatagccaatctatattgattgggattggctttgtatcatg 2653275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 481 - 717
Target Start/End: Original strand, 3132748 - 3132983
Alignment:
Q  481 aacattaagtataacttaattgtgagaccccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaa 580  Q
    |||||||||| |||||||||||||||||||||||||||||||||  | |||| | |||||||  ||| || || |||  |  ||| ||| | |  | |||    
T  3132748 aacattaagtgtaacttaattgtgagaccccattaaacataaggtcattattatgaaagtatttgtaatctagttttacttggaattggaaaaatagtaa 3132847  T
Q  581 agcatagagactattatgtaggtagactgatgatcacatctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagtaat 680  Q
     ||||||||||||  ||||   ||||||||||||||||||||| |||| |  ||  | ||| |||| ||||||||||||  ||||| ||||| |  ||||    
T  3132848 tgcatagagactacaatgtgattagactgatgatcacatctcatagataaatgaatatgagatatcaagtcttcacatatgtataattattatg-ttaat 3132946  T
Q  681 atttatattggattgatccgccatgagaatactacat 717  Q
    |||||||||||||||| | | ||| ||||||||||||    
T  3132947 atttatattggattgacctgtcataagaatactacat 3132983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 315 - 371
Target Start/End: Complemental strand, 11543279 - 11543223
Alignment:
Q  315 tgttgggataagccctaatagccaatctatattgattgggtttggctttgtatcatg 371  Q
    |||||| |||||||||||||||||||||||||||||||| |||||||||||||||||    
T  11543279 tgttggaataagccctaatagccaatctatattgattggttttggctttgtatcatg 11543223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 323 - 371
Target Start/End: Original strand, 12738451 - 12738499
Alignment:
Q  323 taagccctaatagccaatctatattgattgggtttggctttgtatcatg 371  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  12738451 taagccctaatagccaatctatattgattgggtttggctttgtatcatg 12738499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 588 - 696
Target Start/End: Complemental strand, 47833983 - 47833875
Alignment:
Q  588 agactattatgtaggtagactgatgatcacatctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagtaatatttata 687  Q
    ||||||||| |||||||| ||| |||||| ||||||| ||||||| ||||||||||| | ||| ||||||||| |||||||||||    |||||||||||    
T  47833983 agactattacgtaggtaggctggtgatcagatctcaccgatcatgaataaagagttaccaagttttcacataggtataaatattactcataatatttata 47833884  T
Q  688 ttggattga 696  Q
    || ||||||    
T  47833883 tttgattga 47833875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 578 - 717
Target Start/End: Complemental strand, 10669213 - 10669075
Alignment:
Q  578 taaagcatagagactattatgtaggtagactgatgatcacatctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagt 677  Q
    |||||| | |||||||||||||| |||||||||||| | |||||||  | |||| ||||  ||| |||  |||||  |||||| ||||||||||||||||    
T  10669213 taaagcgtcgagactattatgtatgtagactgatgaccgcatctcatgggtcatagatat-gagatattaagtctatacataggtataaatattaggagt 10669115  T
Q  678 aatatttatattggattgatccgccatgagaatactacat 717  Q
    |||||||||| | |||||| || || ||||||||||||||    
T  10669114 aatatttatactagattgacccaccgtgagaatactacat 10669075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 209 - 290
Target Start/End: Complemental strand, 4810817 - 4810736
Alignment:
Q  209 actgaatcaatatagatagagttgcgctgagactaaatttcaataactattcctcatatgtttcctcttaatcgattgtata 290  Q
    |||||| ||||||||||||| ||| | ||||| |  |||||||||||||||||||||| ||||||||||||| |||||||||    
T  4810817 actgaaccaatatagatagatttgtgttgagattgcatttcaataactattcctcataggtttcctcttaattgattgtata 4810736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 315 - 371
Target Start/End: Complemental strand, 11536361 - 11536305
Alignment:
Q  315 tgttgggataagccctaatagccaatctatattgattgggtttggctttgtatcatg 371  Q
    |||||| ||||||||||||||||| |||||||||||||| |||||||||||||||||    
T  11536361 tgttggaataagccctaatagccactctatattgattggttttggctttgtatcatg 11536305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 323 - 371
Target Start/End: Original strand, 12750741 - 12750789
Alignment:
Q  323 taagccctaatagccaatctatattgattgggtttggctttgtatcatg 371  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||    
T  12750741 taagccctaatagctaatctatattgattgggtttggctttgtatcatg 12750789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 323 - 371
Target Start/End: Original strand, 15152358 - 15152406
Alignment:
Q  323 taagccctaatagccaatctatattgattgggtttggctttgtatcatg 371  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||    
T  15152358 taagccctaatagccaatctatattgattgggtttggttttgtatcatg 15152406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 587 - 687
Target Start/End: Original strand, 19859122 - 19859221
Alignment:
Q  587 gagactattatgtaggtagactgatgatcacatctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagtaatatttat 686  Q
    |||||||||||||| |||||||||||| | |||||||  | |||| ||||  ||| |||| |||||  ||||||||||||||||||||||||||||||||    
T  19859122 gagactattatgtatgtagactgatgaccgcatctcatgggtcatagatat-gagatatcaagtctatacatagatataaatattaggagtaatatttat 19859220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 323 - 370
Target Start/End: Original strand, 29327698 - 29327745
Alignment:
Q  323 taagccctaatagccaatctatattgattgggtttggctttgtatcat 370  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||    
T  29327698 taagccctaatagccaatctatattgattgggtttggttttgtatcat 29327745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 323 - 371
Target Start/End: Original strand, 15148057 - 15148105
Alignment:
Q  323 taagccctaatagccaatctatattgattgggtttggctttgtatcatg 371  Q
    ||||||||||||||||||||||||| ||||||||||| |||||||||||    
T  15148057 taagccctaatagccaatctatattaattgggtttggttttgtatcatg 15148105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 662 - 714
Target Start/End: Original strand, 16011515 - 16011567
Alignment:
Q  662 tataaatattaggagtaatatttatattggattgatccgccatgagaatacta 714  Q
    |||||||||||||||||||||||||| |||||||| || ||||||||||||||    
T  16011515 tataaatattaggagtaatatttatactggattgacccaccatgagaatacta 16011567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 654 - 717
Target Start/End: Original strand, 2365169 - 2365232
Alignment:
Q  654 cacatagatataaatattaggagtaatatttatattggattgatccgccatgagaatactacat 717  Q
    ||||||||||| |||||||||||||||||||| |||||||||| || |||||| ||| ||||||    
T  2365169 cacatagatatcaatattaggagtaatatttacattggattgacccaccatgaaaatgctacat 2365232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 662 - 716
Target Start/End: Original strand, 14591924 - 14591978
Alignment:
Q  662 tataaatattaggagtaatatttatattggattgatccgccatgagaatactaca 716  Q
    |||||||||||||||||||||||||| |||||||| || || |||||||||||||    
T  14591924 tataaatattaggagtaatatttatactggattgacccaccgtgagaatactaca 14591978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 655 - 717
Target Start/End: Complemental strand, 41681203 - 41681141
Alignment:
Q  655 acatagatataaatattaggagtaatatttatattggattgatccgccatgagaatactacat 717  Q
    |||||| ||||||||||| |||||||||||||| |||||||| || || ||||||||||||||    
T  41681203 acataggtataaatattatgagtaatatttatactggattgacccaccgtgagaatactacat 41681141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 457 - 522
Target Start/End: Original strand, 10234179 - 10234244
Alignment:
Q  457 tagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccattaaacataa 522  Q
    ||||||||||||||||||||||| | |||||| |||||||||||  |||||  |||||||||||||    
T  10234179 tagaatagttagtccgtttaatgaaccattaaatataacttaatcatgagattccattaaacataa 10234244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 220 - 315
Target Start/End: Original strand, 7394811 - 7394905
Alignment:
Q  220 atagatagagttgcgctgagactaaatttcaataactattcctcatatgtttcctcttaatcgattgtatatactttttatgcctcagatacaact 315  Q
    ||||||| ||||| |||| || | |||||||||||||||||||  ||||||||||| |||  ||||||||||  ||||||||||| ||||| ||||    
T  7394811 atagataaagttgtgctgggattgaatttcaataactattccttttatgtttcctcataactgattgtatat-ttttttatgccttagatataact 7394905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 323 - 370
Target Start/End: Original strand, 13392038 - 13392085
Alignment:
Q  323 taagccctaatagccaatctatattgattgggtttggctttgtatcat 370  Q
    |||||||||||| ||||||||||||||||| ||||| |||||||||||    
T  13392038 taagccctaatatccaatctatattgattgtgtttgactttgtatcat 13392085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 578 - 717
Target Start/End: Complemental strand, 19393735 - 19393597
Alignment:
Q  578 taaagcatagagactattatgtaggtagactgatgatcacatctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagt 677  Q
    |||||| | |||||||||||||| ||||||| |||| ||||| |||  | ||||  |||  ||| |||  |||||  |||||| ||||||||||||||||    
T  19393735 taaagcgtcgagactattatgtatgtagactaatgaccacatttcatgggtcataaatat-gagatattaagtctatacataggtataaatattaggagt 19393637  T
Q  678 aatatttatattggattgatccgccatgagaatactacat 717  Q
    |||||||||| | |||||| |  || ||||||||||||||    
T  19393636 aatatttatactagattgaccgaccgtgagaatactacat 19393597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 578 - 717
Target Start/End: Complemental strand, 47167170 - 47167032
Alignment:
Q  578 taaagcatagagactattatgtaggtagactgatgatcacatctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagt 677  Q
    |||||| | |||||||||||||| |||||||||||| | |||||||  | | || ||||  ||| |||  |||||  |||||| ||||||||||| ||||    
T  47167170 taaagcgtcgagactattatgtatgtagactgatgaccgcatctcatgggttatagatat-gagatattaagtctatacataggtataaatattatgagt 47167072  T
Q  678 aatatttatattggattgatccgccatgagaatactacat 717  Q
    |||||||||| | ||| || || || ||||||||||||||    
T  47167071 aatatttatactagatagacccaccgtgagaatactacat 47167032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 579 - 717
Target Start/End: Original strand, 19388544 - 19388681
Alignment:
Q  579 aaagcatagagactattatgtaggtagactgatgatcacatctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagta 678  Q
    |||||||||||| |||||||||  |||| |||||| || ||||||| | ||||| |||  ||| |||  ||| |  ||| || |||||||||||||||||    
T  19388544 aaagcatagagattattatgtatatagattgatgaccatatctcacgggtcatgaatat-gagatattaagtttgtacaaaggtataaatattaggagta 19388642  T
Q  679 atatttatattggattgatccgccatgagaatactacat 717  Q
    ||||||||| |||||||  |   ||||||||||||||||    
T  19388643 atatttatactggattgcccaatcatgagaatactacat 19388681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 314 - 371
Target Start/End: Complemental strand, 18258144 - 18258087
Alignment:
Q  314 ctgttgggataagccctaatagccaatctatattgattgggtttggctttgtatcatg 371  Q
    |||||||  |||||||| |||||||||||| ||||||||| |||||| ||||||||||    
T  18258144 ctgttggagtaagccctgatagccaatctagattgattggttttggccttgtatcatg 18258087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 407 - 439
Target Start/End: Complemental strand, 2653239 - 2653207
Alignment:
Q  407 acaaggcatttctttattgattttgttttgttt 439  Q
    |||||||||||||||||||||||||||||||||    
T  2653239 acaaggcatttctttattgattttgttttgttt 2653207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 585 - 717
Target Start/End: Complemental strand, 25845780 - 25845649
Alignment:
Q  585 tagagactattatgtaggtagactgatgatcacatctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagtaatattt 684  Q
    |||||||||||||| | |||||||||||| |||||||||  | ||||| |||  ||| |||  |||||  || ||  | | |||||||||||||||||||    
T  25845780 tagagactattatgcatgtagactgatgaccacatctcattgctcatgaatat-gagatattaagtctatacgtatgtgtcaatattaggagtaatattt 25845682  T
Q  685 atattggattgatccgccatgagaatactacat 717  Q
    ||| ||||||||  | || ||||||||||||||    
T  25845681 atactggattgacacaccgtgagaatactacat 25845649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 585 - 717
Target Start/End: Complemental strand, 25846199 - 25846068
Alignment:
Q  585 tagagactattatgtaggtagactgatgatcacatctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagtaatattt 684  Q
    |||||||||||||| | |||||||||||| |||||||||  | ||||| |||  ||| |||  |||||  || ||  | | |||||||||||||||||||    
T  25846199 tagagactattatgcatgtagactgatgaccacatctcattgctcatgaatat-gagatattaagtctatacgtatgtgtcaatattaggagtaatattt 25846101  T
Q  685 atattggattgatccgccatgagaatactacat 717  Q
    ||| ||||||||  | || ||||||||||||||    
T  25846100 atactggattgacacaccgtgagaatactacat 25846068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 669 - 717
Target Start/End: Complemental strand, 31190660 - 31190612
Alignment:
Q  669 attaggagtaatatttatattggattgatccgccatgagaatactacat 717  Q
    |||||||| |||||||||| |||||||| || |||||||||||||||||    
T  31190660 attaggagcaatatttatactggattgacccaccatgagaatactacat 31190612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 647 - 694
Target Start/End: Original strand, 7396464 - 7396511
Alignment:
Q  647 cagtcttcacatagatataaatattaggagtaatatttatattggatt 694  Q
    |||| |||||||| |||||||||||| | |||||||||||||||||||    
T  7396464 cagtattcacataaatataaatattatgggtaatatttatattggatt 7396511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 578 - 717
Target Start/End: Original strand, 28130552 - 28130690
Alignment:
Q  578 taaagcatagagactattatgtaggtagactgatgatcacatctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagt 677  Q
    |||||| | |||||||||||| | |||||||||||| | |||||||  | ||||  |||  ||| |||  |||||  |||||| ||||||||| ||||||    
T  28130552 taaagcgtcgagactattatgcatgtagactgatgaccgcatctcatgggtcataaatat-gagatattaagtctatacataggtataaatatcaggagt 28130650  T
Q  678 aatatttatattggattgatccgccatgagaatactacat 717  Q
    |||||||||| |||||||| || |  |||||||| |||||    
T  28130651 aatatttatactggattgacccactgtgagaatattacat 28130690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 662 - 717
Target Start/End: Original strand, 34128647 - 34128702
Alignment:
Q  662 tataaatattaggagtaatatttatattggattgatccgccatgagaatactacat 717  Q
    |||||||||||||||||||||||||| ||||| |||||    ||||||||||||||    
T  34128647 tataaatattaggagtaatatttatactggatagatccattgtgagaatactacat 34128702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 209 - 306
Target Start/End: Original strand, 318367 - 318462
Alignment:
Q  209 actgaatcaatatagatagagttgcgctgagactaaatttcaataactattcctcatatgtttcctcttaatcgattgtatatactttttatgcctca 306  Q
    ||||||| |||||||||||| ||| |||  || | |||||||| |||||| |||| |||| ||||| ||||| |||||  ||||||||||||| ||||    
T  318367 actgaataaatatagatagatttgggctaggattgaatttcaaaaactatccctcgtatggttcctattaattgattg--tatactttttatgtctca 318462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 299; Significance: 1e-168; HSPs: 50)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 299; E-Value: 1e-168
Query Start/End: Original strand, 407 - 717
Target Start/End: Complemental strand, 27381459 - 27381149
Alignment:
Q  407 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 506  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27381459 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 27381360  T
Q  507 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 606  Q
    ||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27381359 accccattaaacatatggaaactattctcaaagtatccatagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 27381260  T
Q  607 ctgatgatcacatctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagtaatatttatattggattgatccgccatga 706  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27381259 ctgatgatcacatctcacagatcatggataaagagttatcaagtcttcacatagatataaatattaggagtaatatttatattggattgatccgccatga 27381160  T
Q  707 gaatactacat 717  Q
    |||||||||||    
T  27381159 gaatactacat 27381149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 299; E-Value: 1e-168
Query Start/End: Original strand, 407 - 717
Target Start/End: Complemental strand, 27471842 - 27471532
Alignment:
Q  407 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 506  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27471842 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 27471743  T
Q  507 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 606  Q
    ||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27471742 accccattaaacatatggaaactattctcaaagtatccatagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 27471643  T
Q  607 ctgatgatcacatctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagtaatatttatattggattgatccgccatga 706  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27471642 ctgatgatcacatctcacagatcatggataaagagttatcaagtcttcacatagatataaatattaggagtaatatttatattggattgatccgccatga 27471543  T
Q  707 gaatactacat 717  Q
    |||||||||||    
T  27471542 gaatactacat 27471532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 297; E-Value: 1e-166
Query Start/End: Original strand, 409 - 717
Target Start/End: Complemental strand, 17684674 - 17684366
Alignment:
Q  409 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 508  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17684674 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 17684575  T
Q  509 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagact 608  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  17684574 cccgttaaacataaggaaactattctcaaagtatccgtagtcaagctttgatgagaagtgggatatcattaaagcatagagactattatgtaggtagact 17684475  T
Q  609 gatgatcacatctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagtaatatttatattggattgatccgccatgaga 708  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17684474 gatgatcacatctcacagatcatggataaagagttatcaagtcttcacatagatataaatattaggagtaatatttatattggattgatccgccatgaga 17684375  T
Q  709 atactacat 717  Q
    |||||||||    
T  17684374 atactacat 17684366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 291; E-Value: 1e-163
Query Start/End: Original strand, 407 - 717
Target Start/End: Original strand, 29308890 - 29309200
Alignment:
Q  407 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 506  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  29308890 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgag 29308989  T
Q  507 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 606  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  29308990 agcccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 29309089  T
Q  607 ctgatgatcacatctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagtaatatttatattggattgatccgccatga 706  Q
    ||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29309090 ctgatgatcacatctcacatatcatggataaagagttatcaagtcttcacatagatataaatattaggagtaatatttatattggattgatccgccatga 29309189  T
Q  707 gaatactacat 717  Q
    |||||||||||    
T  29309190 gaatactacat 29309200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 291; E-Value: 1e-163
Query Start/End: Original strand, 407 - 717
Target Start/End: Original strand, 29315850 - 29316160
Alignment:
Q  407 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 506  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  29315850 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgag 29315949  T
Q  507 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 606  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  29315950 agcccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 29316049  T
Q  607 ctgatgatcacatctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagtaatatttatattggattgatccgccatga 706  Q
    ||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29316050 ctgatgatcacatctcacatatcatggataaagagttatcaagtcttcacatagatataaatattaggagtaatatttatattggattgatccgccatga 29316149  T
Q  707 gaatactacat 717  Q
    |||||||||||    
T  29316150 gaatactacat 29316160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 283; E-Value: 1e-158
Query Start/End: Original strand, 407 - 717
Target Start/End: Complemental strand, 17691647 - 17691337
Alignment:
Q  407 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 506  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17691647 acaaggcatttctttattgattttgttttctttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 17691548  T
Q  507 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 606  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||  ||||||||||||||||||||||||||| |||||||||||||||||||    
T  17691547 accccattaaacataaggaaactattcttaaagtatccgtagtcaagctttagtgagaagtgggatatcattaaagcataaagactattatgtaggtaga 17691448  T
Q  607 ctgatgatcacatctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagtaatatttatattggattgatccgccatga 706  Q
    ||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17691447 ctgatgatcacatctcacatatcatggataaagagttatcaagtcttcacatagatataaatattaggagtaatatttatattggattgatccgccatga 17691348  T
Q  707 gaatactacat 717  Q
    |||||||||||    
T  17691347 gaatactacat 17691337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 273; E-Value: 1e-152
Query Start/End: Original strand, 409 - 717
Target Start/End: Complemental strand, 189182 - 188874
Alignment:
Q  409 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 508  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  189182 aaggcatttctttattgattttgttttgtttcaaaataataaagtccttagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 189083  T
Q  509 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagact 608  Q
    |||||||||||||||||||||||||| |||||||  ||||||||||||| |||||||||| |||||||||||||||||||||||||||||| ||||||||    
T  189082 cccattaaacataaggaaactattcttaaagtatttgtagtcaagctttattgagaagtgagatatcattaaagcatagagactattatgtgggtagact 188983  T
Q  609 gatgatcacatctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagtaatatttatattggattgatccgccatgaga 708  Q
    ||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  188982 gatgatcacatctcacatatcatggataaagagttatcaagtcttcacatagatataaatattaggagtaatatttatattggattgatccgccatgaga 188883  T
Q  709 atactacat 717  Q
    |||||||||    
T  188882 atactacat 188874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 273; E-Value: 1e-152
Query Start/End: Original strand, 409 - 717
Target Start/End: Original strand, 11651725 - 11652033
Alignment:
Q  409 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 508  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  11651725 aaggcatttctttattgattttgatttgtttcaaaataataaagtccctaaaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 11651824  T
Q  509 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagact 608  Q
    ||||||||| |||||||||||||||| |||||||| ||||||||||||| |||||||||| |||||||||||||||||||||||||||||| ||||||||    
T  11651825 cccattaaaaataaggaaactattctaaaagtatcagtagtcaagctttattgagaagtgagatatcattaaagcatagagactattatgtgggtagact 11651924  T
Q  609 gatgatcacatctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagtaatatttatattggattgatccgccatgaga 708  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11651925 gatgatcacatctcacagatcatggataaagagttatcaagtcttcacatagatataaatattaggagtaatatttatattggattgatccgccatgaga 11652024  T
Q  709 atactacat 717  Q
    |||||||||    
T  11652025 atactacat 11652033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 253; E-Value: 1e-140
Query Start/End: Original strand, 409 - 677
Target Start/End: Complemental strand, 16566525 - 16566257
Alignment:
Q  409 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 508  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16566525 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 16566426  T
Q  509 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagact 608  Q
    ||| |||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16566425 cccgttaaacataaggaaactattcttaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 16566326  T
Q  609 gatgatcacatctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagt 677  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  16566325 gatgatcacatctcacagatcatggataaagagttatcaagtcttcacatagatataaatattaggagt 16566257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 409 - 625
Target Start/End: Complemental strand, 25537364 - 25537148
Alignment:
Q  409 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 508  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||    
T  25537364 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaataattagtccgtttaatggaacattaagtataactttattgtgagac 25537265  T
Q  509 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagact 608  Q
    ||| |||||||||||||||||||||| ||||||| |||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||    
T  25537264 cccgttaaacataaggaaactattcttaaagtattcgtagtcaagctttattgagaagtgggatatcattaaagcataaagactattatgtaggtagact 25537165  T
Q  609 gatgatcacatctcaca 625  Q
    |||||||||||||||||    
T  25537164 gatgatcacatctcaca 25537148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 151; E-Value: 2e-79
Query Start/End: Original strand, 409 - 695
Target Start/End: Complemental strand, 13359474 - 13359188
Alignment:
Q  409 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 508  Q
    ||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||| || |||||||| |||||||||||||||||| |||| ||    
T  13359474 aaggcatttatttatttattttgttttgtttcaaaataataaagtccctagaatagttagttcgcttaatggagcattaagtataacttaatcgtgaaac 13359375  T
Q  509 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagact 608  Q
     |||||||||||||  | | |||| | ||||||||||||||||| |||| ||| ||| ||||| | ||||||||| ||||||||||||| | | ||||||    
T  13359374 tccattaaacataaaaacattatttttaaagtatccgtagtcaacctttattgtgaaatgggacaacattaaagcgtagagactattatatggatagact 13359275  T
Q  609 gatgatcacatctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagtaatatttatattggattg 695  Q
    |||||||||||||| || |||||||||||| ||||||| | ||||||| ||||||||| |||||| |||| ||||||||||| ||||    
T  13359274 gatgatcacatctcgcaaatcatggataaaaagttatcaaatcttcacttagatataagtattagaagtagtatttatattgaattg 13359188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 430 - 716
Target Start/End: Original strand, 27925772 - 27926062
Alignment:
Q  430 tgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacat---taagtata--acttaattgtgagaccccattaaacataagg 524  Q
    |||||||||||||||||||||||||| |||||||  ||||  |||||| |||||||   ||||| |   ||||||| ||||||| |||||||||  |||     
T  27925772 tgttttgtttcaaaataataaagtccttagaataactagtatgtttaacggaacataattaagtgtgtgacttaatcgtgagactccattaaactaaaga 27925871  T
Q  525 aaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgatcacatctcac 624  Q
    ||| |||||| ||||||||  ||||||| |||| ||  ||||||| ||| |||| ||||| | |||||||||||| | || |||||||||| ||||||||    
T  27925872 aaattattcttaaagtatctctagtcaaactttatttggaagtggtatagcattgaagcacaaagactattatgtggataaactgatgatctcatctcac 27925971  T
Q  625 agatcatggataaagagttatccagtcttcacatagatataaatattaggagtaatatttatattggattgatccgccatgagaatactaca 716  Q
     ||||||||||||||| ||||  ||| ||||||||||||| || ||||||| |||||||||||||| |||||  |||||||| |||||||||    
T  27925972 ggatcatggataaagatttatgaagttttcacatagatattaa-attaggaataatatttatattgaattgactcgccatgataatactaca 27926062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 446 - 711
Target Start/End: Complemental strand, 20553755 - 20553492
Alignment:
Q  446 aataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccattaaacataaggaaactattctcaaagtatccg 545  Q
    ||||||||| |||| |||| |||||||||||||| || ||||||||  ||||||| |||||| ||||||||| ||||| | | |||||| |||| |||||    
T  20553755 aataaagtctctaggatagctagtccgtttaatgaaatattaagtacgacttaatcgtgagatcccattaaatataagaatattattcttaaagcatccg 20553656  T
Q  546 tagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgatcacatctcacagatcatggataaagagttat 645  Q
    |||| ||  ||| ||| |||||| ||||  ||||||||||| ||| | |||||| ||||||||||||||||||||||||| ||||| ||||||||  |||    
T  20553655 tagtgaatttttattgtgaagtgagataaaattaaagcataaagatttttatgttggtagactgatgatcacatctcacatatcatcgataaagaaatat 20553556  T
Q  646 ccagtcttcacatagatataaatattaggagtaatatttatattggattgatccgccatgagaata 711  Q
    | |   ||||||||||||| ||||||| || ||||||||||||| |||||| ||  ||||||||||    
T  20553555 caaacattcacatagatat-aatattaagaataatatttatatt-gattgacccatcatgagaata 20553492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 445 - 717
Target Start/End: Complemental strand, 17850663 - 17850392
Alignment:
Q  445 taataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccattaaacataaggaaactattctcaaagtatcc 544  Q
    |||||||||||||| ||||| ||||  ||||  |||||||||| |||  |||||||||||| | || |||||| | ||||| |||||||| ||| |||||    
T  17850663 taataaagtccctataatagctagtttgtttgttggaacattatgtaagacttaattgtgatatccaattaaaaacaaggacactattcttaaattatcc 17850564  T
Q  545 gtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgatcacatctcacagatcatggataaagagtta 644  Q
     |||||||||||| ||| |||||   ||| |||| ||| ||| |||||||||| | |||||||||||||||| |||| | ||||||| || || ||||||    
T  17850563 atagtcaagcttt-ttgtgaagtcaaataacattcaagtatatagactattatatgggtagactgatgatcatatcttatagatcattgacaacgagtta 17850465  T
Q  645 tccagtcttcacatagatataaatattaggagtaatatttatattggattgatccgccatgagaatactacat 717  Q
    ||  || ||||||||| ||||||||||| ||||||||| ||||||||||||| || || | ||||||||||||    
T  17850464 tcgtgtattcacataggtataaatattatgagtaatatatatattggattgaccctccttaagaatactacat 17850392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 621 - 715
Target Start/End: Complemental strand, 16394438 - 16394344
Alignment:
Q  621 tcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagtaatatttatattggattgatccgccatgagaatactac 715  Q
    ||||| |||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||    
T  16394438 tcacatatcatggataaacagttatcaagtcttcacatagatataaatattaggagtaatatttatattggattgacccaccatgagaatactac 16394344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 578 - 717
Target Start/End: Complemental strand, 18020152 - 18020014
Alignment:
Q  578 taaagcatagagactattatgtaggtagactgatgatcacatctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagt 677  Q
    |||||| | |||||||||||||| |||||||||||| | |||||||  | |||| ||||  ||| |||| |||||  |||||||||||||||||||||||    
T  18020152 taaagcgtcgagactattatgtatgtagactgatgaccgcatctcatgggtcatagatat-gagatatcaagtctatacatagatataaatattaggagt 18020054  T
Q  678 aatatttatattggattgatccgccatgagaatactacat 717  Q
    ||||||||||||||||||| || || ||||||||||||||    
T  18020053 aatatttatattggattgacccaccgtgagaatactacat 18020014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 590 - 717
Target Start/End: Original strand, 2669476 - 2669603
Alignment:
Q  590 actattatgtaggtagactgatgatcacatctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagtaatatttatatt 689  Q
    |||||||| | |||||| ||||||||||||||||   ||||| ||| ||||||||||  || ||||||||||||||||||||||||||||||||||||||    
T  2669476 actattatatgggtagattgatgatcacatctcatgaatcattgattaagagttatcatgtattcacatagatataaatattaggagtaatatttatatt 2669575  T
Q  690 ggattgatccgccatgagaatactacat 717  Q
     ||||||  |  ||||| ||||||||||    
T  2669576 tgattgacacatcatgaaaatactacat 2669603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 578 - 717
Target Start/End: Original strand, 16789062 - 16789200
Alignment:
Q  578 taaagcatagagactattatgtaggtagactgatgatcacatctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagt 677  Q
    |||||| | |||||||||||||| |||||||||||| | |||||||  | |||| ||||  ||| |||| |||||  |||||||||||||||||||||||    
T  16789062 taaagcgtcgagactattatgtatgtagactgatgaccgcatctcatgggtcatagatat-gagatatcaagtctatacatagatataaatattaggagt 16789160  T
Q  678 aatatttatattggattgatccgccatgagaatactacat 717  Q
    ||||||||||||||||||| || |  ||||||||||||||    
T  16789161 aatatttatattggattgacccactgtgagaatactacat 16789200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 578 - 717
Target Start/End: Complemental strand, 22860199 - 22860061
Alignment:
Q  578 taaagcatagagactattatgtaggtagactgatgatcacatctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagt 677  Q
    |||||| | |||||||||||||| |||||||||||| | |||||||  | |||| ||||  ||| |||| |||||  |||||||||||||||||||||||    
T  22860199 taaagcgtcgagactattatgtatgtagactgatgaccgcatctcatgggtcatagatat-gagatatcaagtctatacatagatataaatattaggagt 22860101  T
Q  678 aatatttatattggattgatccgccatgagaatactacat 717  Q
    ||||||||||||||||||| || |  ||||||||||||||    
T  22860100 aatatttatattggattgacccactgtgagaatactacat 22860061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 563 - 710
Target Start/End: Original strand, 28172712 - 28172859
Alignment:
Q  563 gaagtgggatatcattaaagcatagagactattatgtaggtagactgatgatcacatctcacagatcatggataaagagttatccagtcttcacatagat 662  Q
    ||||||||||| || | ||| ||||| | ||||||||   | ||||||||||||||||| ||||||||| | |||| ||||||| |||||| ||||||||    
T  28172712 gaagtgggataacactgaagaatagaaattattatgtgaatggactgatgatcacatcttacagatcattgttaaaaagttatcaagtctttacatagat 28172811  T
Q  663 ataaatattaggagtaatatttatattggattgatccgccatgagaat 710  Q
    |||||||||| | ||| | ||||||||||||||| || ||||||||||    
T  28172812 ataaatattaagggtagtgtttatattggattgaccctccatgagaat 28172859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 655 - 717
Target Start/End: Original strand, 27296877 - 27296939
Alignment:
Q  655 acatagatataaatattaggagtaatatttatattggattgatccgccatgagaatactacat 717  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27296877 acattgatataaatattaggagtaatatttatattggattgatccgccatgagaatactacat 27296939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 653 - 717
Target Start/End: Complemental strand, 25537152 - 25537088
Alignment:
Q  653 tcacatagatataaatattaggagtaatatttatattggattgatccgccatgagaatactacat 717  Q
    |||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||    
T  25537152 tcacatagatataaatattaggtgtcatatttatattggattgatccgccatgagaatactacat 25537088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 578 - 717
Target Start/End: Complemental strand, 1586419 - 1586281
Alignment:
Q  578 taaagcatagagactattatgtaggtagactgatgatcacatctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagt 677  Q
    |||||| | |||||||||||||| |||||||||||| | |||||||  | |||| ||||  ||| |||  |||||  ||||||||||||||||||| |||    
T  1586419 taaagcgtcgagactattatgtatgtagactgatgaccgcatctcatgggtcatagatat-gagatattaagtctatacatagatataaatattagaagt 1586321  T
Q  678 aatatttatattggattgatccgccatgagaatactacat 717  Q
    ||||||||||||||||||| || |  ||||||||||||||    
T  1586320 aatatttatattggattgacccactgtgagaatactacat 1586281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 578 - 717
Target Start/End: Complemental strand, 27508658 - 27508520
Alignment:
Q  578 taaagcatagagactattatgtaggtagactgatgatcacatctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagt 677  Q
    |||||| | |||||| ||||||| |||||||||||| | |||||||  | |||| ||||  ||| |||| |||||  |||||||||||||||||||||||    
T  27508658 taaagcgtcgagactgttatgtatgtagactgatgaccgcatctcatgggtcatagatat-gagatatcaagtctatacatagatataaatattaggagt 27508560  T
Q  678 aatatttatattggattgatccgccatgagaatactacat 717  Q
    ||||||| ||||||||||| || |  ||||||||||||||    
T  27508559 aatatttgtattggattgacccactgtgagaatactacat 27508520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 578 - 717
Target Start/End: Complemental strand, 27528244 - 27528106
Alignment:
Q  578 taaagcatagagactattatgtaggtagactgatgatcacatctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagt 677  Q
    |||||| | |||||| ||||||| |||||||||||| | |||||||  | |||| ||||  ||| |||| |||||  |||||||||||||||||||||||    
T  27528244 taaagcgtcgagactgttatgtatgtagactgatgaccgcatctcatgggtcatagatat-gagatatcaagtctatacatagatataaatattaggagt 27528146  T
Q  678 aatatttatattggattgatccgccatgagaatactacat 717  Q
    ||||||| ||||||||||| || |  ||||||||||||||    
T  27528145 aatatttgtattggattgacccactgtgagaatactacat 27528106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 317 - 371
Target Start/End: Complemental strand, 17691737 - 17691683
Alignment:
Q  317 ttgggataagccctaatagccaatctatattgattgggtttggctttgtatcatg 371  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17691737 ttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 17691683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 445 - 717
Target Start/End: Complemental strand, 20736773 - 20736502
Alignment:
Q  445 taataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccattaaacataaggaa-actattctcaaa-gtat 542  Q
    ||||||||| |||||||||| |||| ||| |||||| | ||||||| | |||||||  |||||   |||||| ||||| ||| | |||||| ||| ||||    
T  20736773 taataaagttcctagaatagatagttcgtgtaatggtatattaagtttgacttaatcatgagattacattaa-cataaagaacattattcttaaatgtat 20736675  T
Q  543 ccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgatcacatctcacagatcatggataaagagt 642  Q
    | |||||||||||||  | |||| |||||||  | |||||| | |||||||||||||| |||||||||||| |||||||||    | || ||||  |||     
T  20736674 ctgtagtcaagctttaataagaactgggataataataaagcgtcgagactattatgtatgtagactgatgaccacatctcatgtgttatagatat-gaga 20736576  T
Q  643 tatccagtcttcacatagatataaatattaggagtaatatttatattggattgatccgccatgagaatactacat 717  Q
    |||  ||| |  | |||| |||||||||||||||||||||||||| |||||||||||  | ||||||||||||||    
T  20736575 tattaagtttata-ataggtataaatattaggagtaatatttatactggattgatccatcgtgagaatactacat 20736502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 315 - 371
Target Start/End: Complemental strand, 27381551 - 27381495
Alignment:
Q  315 tgttgggataagccctaatagccaatctatattgattgggtttggctttgtatcatg 371  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||| |||||    
T  27381551 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtttcatg 27381495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 315 - 371
Target Start/End: Complemental strand, 27471934 - 27471878
Alignment:
Q  315 tgttgggataagccctaatagccaatctatattgattgggtttggctttgtatcatg 371  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||| |||||    
T  27471934 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtttcatg 27471878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 315 - 371
Target Start/End: Original strand, 29308798 - 29308854
Alignment:
Q  315 tgttgggataagccctaatagccaatctatattgattgggtttggctttgtatcatg 371  Q
    |||||| |||||||||||||||||||||||||||||||| |||||||||||||||||    
T  29308798 tgttggaataagccctaatagccaatctatattgattggttttggctttgtatcatg 29308854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 315 - 371
Target Start/End: Original strand, 29315758 - 29315814
Alignment:
Q  315 tgttgggataagccctaatagccaatctatattgattgggtttggctttgtatcatg 371  Q
    |||||| |||||||||||||||||||||||||||||||| |||||||||||||||||    
T  29315758 tgttggaataagccctaatagccaatctatattgattggttttggctttgtatcatg 29315814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 426 - 717
Target Start/End: Original strand, 8509941 - 8510233
Alignment:
Q  426 attttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgaga-ccccattaaacataagg 524  Q
    ||||| |||||||| ||||||||||||||  ||||||| ||||||  ||| ||||||||||| |||  |||||||| ||||| |||||||||| || |||    
T  8509941 attttattttgttttaaaataataaagtctatagaataattagtctatttgatggaacattatgtacgacttaattatgagacccccattaaatatgagg 8510040  T
Q  525 aaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatg-atcacatctca 623  Q
    |   |||| | |||||||  ||||| ||||||| ||  ||| || |||| ||||||| |||| ||||||||||||  ||| |  |||| || |||||  |    
T  8510041 atgatattattaaagtatatgtagttaagctttattatgaaatgagatagcattaaaacataaagactattatgtgcgtaaa--gatgtataacatcgta 8510138  T
Q  624 cagatcatggataaagagttatccagtcttcacatagat-ataaatattaggagtaatatttatattggattgatccgccatgagaatactacat 717  Q
    || |||| || |||  |||||||   |||||| |||||| | ||||||||| ||||||||||||||| |||||| |  | |||| ||||||||||    
T  8510139 catatcacgggtaagtagttatcatttcttcatatagataaaaaatattagaagtaatatttatatttgattgacctacaatgataatactacat 8510233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 578 - 717
Target Start/End: Original strand, 14074471 - 14074609
Alignment:
Q  578 taaagcatagagactattatgtaggtagactgatgatcacatctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagt 677  Q
    |||||| | |||||||||||||| |||||||||||| | |||||||  | |||| ||||  ||| |||  |||||  |||||| |||||||||| |||||    
T  14074471 taaagcgtcgagactattatgtatgtagactgatgaccgcatctcatgggtcatagatat-gagatattaagtctatacataggtataaatattgggagt 14074569  T
Q  678 aatatttatattggattgatccgccatgagaatactacat 717  Q
    |||||||||| |||||||| || || ||||||||||||||    
T  14074570 aatatttataatggattgacccaccgtgagaatactacat 14074609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 315 - 371
Target Start/End: Complemental strand, 17684768 - 17684712
Alignment:
Q  315 tgttgggataagccctaatagccaatctatattgattgggtttggctttgtatcatg 371  Q
    |||||| ||||||||||||||||||||||| |||| |||||||||||||||||||||    
T  17684768 tgttggaataagccctaatagccaatctatgttgaatgggtttggctttgtatcatg 17684712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 578 - 717
Target Start/End: Original strand, 8612906 - 8613044
Alignment:
Q  578 taaagcatagagactattatgtaggtagactgatgatcacatctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagt 677  Q
    |||||| | |||||||||||||| |||||||||||| | |||||||  | | || ||||  ||| |||  |||||  |||||| ||||||||||||||||    
T  8612906 taaagcgtcgagactattatgtatgtagactgatgaccgcatctcatgggttatagatat-gagatattaagtctatacataggtataaatattaggagt 8613004  T
Q  678 aatatttatattggattgatccgccatgagaatactacat 717  Q
    |||||||||| ||||| || || || ||||||||||||||    
T  8613005 aatatttatactggatagacccaccgtgagaatactacat 8613044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 314 - 369
Target Start/End: Original strand, 11651629 - 11651684
Alignment:
Q  314 ctgttgggataagccctaatagccaatctatattgattgggtttggctttgtatca 369  Q
    |||||||  |||||||||||||||||||||||||||||| ||||||||||||||||    
T  11651629 ctgttggagtaagccctaatagccaatctatattgattgagtttggctttgtatca 11651684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 672 - 717
Target Start/End: Complemental strand, 16559414 - 16559369
Alignment:
Q  672 aggagtaatatttatattggattgatccgccatgagaatactacat 717  Q
    |||||||||||||||||||||||||||| |||||||||||||||||    
T  16559414 aggagtaatatttatattggattgatccaccatgagaatactacat 16559369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 578 - 682
Target Start/End: Complemental strand, 13995254 - 13995151
Alignment:
Q  578 taaagcatagagactattatgtaggtagactgatgatcacatctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagt 677  Q
    |||||| | |||||||||||||| |||||||||||| | |||||||  | |||| ||||  ||| |||| |||||  |||||||||||||||||||||||    
T  13995254 taaagcgtcgagactattatgtatgtagactgatgaccgcatctcatgggtcatagatat-gagatatcaagtctatacatagatataaatattaggagt 13995156  T
Q  678 aatat 682  Q
    |||||    
T  13995155 aatat 13995151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 323 - 371
Target Start/End: Complemental strand, 25537453 - 25537405
Alignment:
Q  323 taagccctaatagccaatctatattgattgggtttggctttgtatcatg 371  Q
    ||||||||||||||||||||||||||| || ||||||||||||||||||    
T  25537453 taagccctaatagccaatctatattgactgagtttggctttgtatcatg 25537405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 414 - 469
Target Start/End: Complemental strand, 31258120 - 31258065
Alignment:
Q  414 atttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagt 469  Q
    |||||||||||| |||||||||||||||||||||||||||| ||| |||| |||||    
T  31258120 atttctttattgcttttgttttgtttcaaaataataaagtctctaaaataattagt 31258065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 323 - 371
Target Start/End: Complemental strand, 13359560 - 13359512
Alignment:
Q  323 taagccctaatagccaatctatattgattgggtttggctttgtatcatg 371  Q
    |||| |||||||||||||||||||| |||||||||| ||||||||||||    
T  13359560 taagtcctaatagccaatctatattcattgggtttgactttgtatcatg 13359512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 323 - 371
Target Start/End: Complemental strand, 16566611 - 16566563
Alignment:
Q  323 taagccctaatagccaatctatattgattgggtttggctttgtatcatg 371  Q
    |||||||||||||||||||||| ||||||| ||||| ||||||||||||    
T  16566611 taagccctaatagccaatctatgttgattgagtttgactttgtatcatg 16566563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 601 - 717
Target Start/End: Complemental strand, 19347212 - 19347097
Alignment:
Q  601 ggtagactgatgatcacatctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagtaatatttatattggattgatccg 700  Q
    |||||| |||||| || |||||||| ||||| ||||||||||| ||  || ||||||||  |||||| |||| || |||||||| || |||||||| | |    
T  19347212 ggtagattgatgaccatatctcacatatcattgataaagagttgtcatgttttcacataagtataaacatta-gaataatatttgtaatggattgaactg 19347114  T
Q  701 ccatgagaatactacat 717  Q
    |||| ||||||||||||    
T  19347113 ccattagaatactacat 19347097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 662 - 717
Target Start/End: Complemental strand, 5758709 - 5758654
Alignment:
Q  662 tataaatattaggagtaatatttatattggattgatccgccatgagaatactacat 717  Q
    |||||||||||||||||||||||||| ||||| ||||| |  ||||||||||||||    
T  5758709 tataaatattaggagtaatatttatactggatagatccactgtgagaatactacat 5758654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 180 - 315
Target Start/End: Original strand, 24967457 - 24967592
Alignment:
Q  180 aaaagtgttttagtggtttgaa-caaagtta-ctgaatcaatatagatagagttgcgctgagactaaatttcaataactattcctcatatgtttcctctt 277  Q
    ||||||||||||||| | |||| |||||| | || |||||| ||||||| ||||| |||  || | |||||||||||||||||||  |||||||||| ||    
T  24967457 aaaagtgttttagtgatgtgaatcaaagtaaactaaatcaaaatagataaagttgtgcttggattgaatttcaataactattcctattatgtttcctttt 24967556  T
Q  278 aatcgattgtatatactttttatgcctcagatacaact 315  Q
    |||| ||| |||||  ||||||| | ||||||| ||||    
T  24967557 aatcaattttatat--tttttattcatcagatataact 24967592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 244 - 284
Target Start/End: Original strand, 33661131 - 33661171
Alignment:
Q  244 aatttcaataactattcctcatatgtttcctcttaatcgat 284  Q
    |||||||||||||||| ||| ||||||||||||||||||||    
T  33661131 aatttcaataactattactcgtatgtttcctcttaatcgat 33661171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 655 - 714
Target Start/End: Original strand, 21994655 - 21994714
Alignment:
Q  655 acatagatataaatattaggagtaatatttatattggattgatccgccatgagaatacta 714  Q
    |||||| |||||| |||| |||||||||||||| |||| ||| || ||||||||||||||    
T  21994655 acatagctataaacattacgagtaatatttatactggaatgacccaccatgagaatacta 21994714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 329 - 371
Target Start/End: Complemental strand, 16394526 - 16394484
Alignment:
Q  329 ctaatagccaatctatattgattgggtttggctttgtatcatg 371  Q
    ||||||| |||||||||||||||| ||||| ||||||||||||    
T  16394526 ctaatagacaatctatattgattgagtttgactttgtatcatg 16394484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 342 - 371
Target Start/End: Complemental strand, 189250 - 189221
Alignment:
Q  342 tatattgattgggtttggctttgtatcatg 371  Q
    ||||||||||||||||||||||||||||||    
T  189250 tatattgattgggtttggctttgtatcatg 189221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 423 - 488
Target Start/End: Complemental strand, 22259990 - 22259925
Alignment:
Q  423 ttgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaa 488  Q
    ||||||||||| |||| |||||||||||| |||||| ||||  |||||| ||||||  ||||||||    
T  22259990 ttgattttgttatgttgcaaaataataaactccctaaaataactagtccatttaatataacattaa 22259925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 299; Significance: 1e-168; HSPs: 76)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 299; E-Value: 1e-168
Query Start/End: Original strand, 407 - 717
Target Start/End: Complemental strand, 19926967 - 19926657
Alignment:
Q  407 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 506  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19926967 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 19926868  T
Q  507 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 606  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  19926867 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 19926768  T
Q  607 ctgatgatcacatctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagtaatatttatattggattgatccgccatga 706  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19926767 ctgatgatcacatctcacagatcatggataaagagttatcaagtcttcaaatagatataaatattaggagtaatatttatattggattgatccgccatga 19926668  T
Q  707 gaatactacat 717  Q
    |||||||||||    
T  19926667 gaatactacat 19926657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 299; E-Value: 1e-168
Query Start/End: Original strand, 407 - 717
Target Start/End: Original strand, 55612683 - 55612993
Alignment:
Q  407 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 506  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  55612683 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 55612782  T
Q  507 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 606  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  55612783 accccattaaacataaggaaactactctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 55612882  T
Q  607 ctgatgatcacatctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagtaatatttatattggattgatccgccatga 706  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  55612883 ctgatgatcacatctcacagatcatggataaagagttatcaagtcttcacatagatataaatattaggagtaatatttatattggattgatccgccatga 55612982  T
Q  707 gaatactacat 717  Q
    |||||||||||    
T  55612983 gaatactacat 55612993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 295; E-Value: 1e-165
Query Start/End: Original strand, 407 - 717
Target Start/End: Original strand, 26970463 - 26970773
Alignment:
Q  407 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 506  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26970463 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 26970562  T
Q  507 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 606  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  26970563 accccattaaacataaggaaactattctcaaagtatccgtagtcaagatttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 26970662  T
Q  607 ctgatgatcacatctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagtaatatttatattggattgatccgccatga 706  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  26970663 ctgatgatcacatctcacagatcatggataaagagttatcaagtcttcacatagatataaatattagcagtaatatttatattggattgatccgccatga 26970762  T
Q  707 gaatactacat 717  Q
    |||||||||||    
T  26970763 gaatactacat 26970773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 293; E-Value: 1e-164
Query Start/End: Original strand, 409 - 717
Target Start/End: Original strand, 18262214 - 18262522
Alignment:
Q  409 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 508  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18262214 aaggcatttctttattgattttgtttcgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 18262313  T
Q  509 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagact 608  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  18262314 cccgttaaacataaggaaactattctcaaagtatccgtagtcaagctttgatgagaagtgggatatcattaaagcatagagactattatgtaggtagact 18262413  T
Q  609 gatgatcacatctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagtaatatttatattggattgatccgccatgaga 708  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18262414 gatgatcacatctcacagatcatggataaagagttatcaagtcttcacatagatataaatattaggagtaatatttatattggattgatccgccatgaga 18262513  T
Q  709 atactacat 717  Q
    |||||||||    
T  18262514 atactacat 18262522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 291; E-Value: 1e-163
Query Start/End: Original strand, 407 - 717
Target Start/End: Original strand, 868597 - 868907
Alignment:
Q  407 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 506  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  868597 acaagacatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgag 868696  T
Q  507 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 606  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  868697 accccgttaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 868796  T
Q  607 ctgatgatcacatctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagtaatatttatattggattgatccgccatga 706  Q
    |||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  868797 ctgatgatcacatctcacagatcatggataaaaagttatcaagtcttcacatagatataaatattaggagtaatatttatattggattgatccgccatga 868896  T
Q  707 gaatactacat 717  Q
    |||||||||||    
T  868897 gaatactacat 868907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 291; E-Value: 1e-163
Query Start/End: Original strand, 407 - 717
Target Start/End: Original strand, 5707320 - 5707630
Alignment:
Q  407 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 506  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  5707320 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgag 5707419  T
Q  507 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 606  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||    
T  5707420 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgagatatcattaaagcatagagactattatgtaggtaga 5707519  T
Q  607 ctgatgatcacatctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagtaatatttatattggattgatccgccatga 706  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  5707520 ctgatgatcacatctcacagatcatggataaagagttatcaagtcttcacatagatataaatattatgagtaatatttatattggattgatccgccatga 5707619  T
Q  707 gaatactacat 717  Q
    |||||||||||    
T  5707620 gaatactacat 5707630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 291; E-Value: 1e-163
Query Start/End: Original strand, 407 - 717
Target Start/End: Original strand, 26963640 - 26963950
Alignment:
Q  407 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 506  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  26963640 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaaatataacttaattgtgag 26963739  T
Q  507 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 606  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  26963740 accccattaaacataaggaaactattctcaaagtatccgtagtcaagatttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 26963839  T
Q  607 ctgatgatcacatctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagtaatatttatattggattgatccgccatga 706  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  26963840 ctgatgatcacatctcacagatcatggataaagagttatcaagtcttcacatagatataaatattagcagtaatatttatattggattgatccgccatga 26963939  T
Q  707 gaatactacat 717  Q
    |||||||||||    
T  26963940 gaatactacat 26963950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 287; E-Value: 1e-160
Query Start/End: Original strand, 407 - 717
Target Start/End: Original strand, 5713948 - 5714258
Alignment:
Q  407 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 506  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||    
T  5713948 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagcccatttaatggaacattaagtataacttaattgtgag 5714047  T
Q  507 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 606  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||    
T  5714048 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgagatatcattaaagcatagagactattatgtaggtaga 5714147  T
Q  607 ctgatgatcacatctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagtaatatttatattggattgatccgccatga 706  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  5714148 ctgatgatcacatctcacagatcatggataaagagttatcaagtcttcacatagatataaatattatgagtaatatttatattggattgatccgccatga 5714247  T
Q  707 gaatactacat 717  Q
    |||||||||||    
T  5714248 gaatactacat 5714258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 287; E-Value: 1e-160
Query Start/End: Original strand, 407 - 717
Target Start/End: Complemental strand, 10621540 - 10621230
Alignment:
Q  407 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 506  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  10621540 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctggaatagttagtccgtttaatggaacattaagtataacttaattgtgag 10621441  T
Q  507 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 606  Q
    | ||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  10621440 agcccattaaacataaggaaactattctcaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 10621341  T
Q  607 ctgatgatcacatctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagtaatatttatattggattgatccgccatga 706  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  10621340 ctgatgatcacatctcacagatcatggataaagagttatcaagtcttcacatagatataaattttaggagtaatatttatattggattgatccgccatga 10621241  T
Q  707 gaatactacat 717  Q
    |||||||||||    
T  10621240 gaatactacat 10621230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 287; E-Value: 1e-160
Query Start/End: Original strand, 407 - 717
Target Start/End: Complemental strand, 10628619 - 10628309
Alignment:
Q  407 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 506  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  10628619 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctggaatagttagtccgtttaatggaacattaagtataacttaattgtgag 10628520  T
Q  507 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 606  Q
    | ||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||    
T  10628519 agcccattaaacataaggaaactattctcaaagtatctgtagtcaagctttattgagaagtgggatattattaaagcatagagactattatgtaggtaga 10628420  T
Q  607 ctgatgatcacatctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagtaatatttatattggattgatccgccatga 706  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10628419 ctgatgatcacatctcacagatcatggataaagagttatcaagtcttcacatagatataaatattaggagtaatatttatattggattgatccgccatga 10628320  T
Q  707 gaatactacat 717  Q
    |||||||||||    
T  10628319 gaatactacat 10628309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 282; E-Value: 1e-157
Query Start/End: Original strand, 409 - 717
Target Start/End: Original strand, 18269070 - 18269383
Alignment:
Q  409 aaggcatttctttattgatttt-----gttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgt 503  Q
    ||||||||||||||||||||||     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18269070 aaggcatttctttattgattttgttttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgt 18269169  T
Q  504 gagaccccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggt 603  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  18269170 gagaccccgttaaacataaggaaactattctcaaagtatccgtagtcaagctttgatgagaagtgggatatcattaaagcatagagactattatgtaggt 18269269  T
Q  604 agactgatgatcacatctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagtaatatttatattggattgatccgcca 703  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18269270 agactgatgatcacatctcacagatcatggataaagagttatcaagtcttcacatagatataaatattaggagtaatatttatattggattgatccgcca 18269369  T
Q  704 tgagaatactacat 717  Q
    ||||||||||||||    
T  18269370 tgagaatactacat 18269383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 277; E-Value: 1e-154
Query Start/End: Original strand, 409 - 717
Target Start/End: Complemental strand, 4426808 - 4426501
Alignment:
Q  409 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 508  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4426808 aaggcatttctttattgattttgttttgtttcaaaataataaagtccttagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 4426709  T
Q  509 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagact 608  Q
    ||| |||||||||||||| ||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  4426708 cccgttaaacataaggaa-ctattcttaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtgggtagact 4426610  T
Q  609 gatgatcacatctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagtaatatttatattggattgatccgccatgaga 708  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4426609 gatgatcacatctcacagatcatggataaagagttatcaagtcttcacatagatataaatattaggagtaatatttatattggattgatccgccatgaga 4426510  T
Q  709 atactacat 717  Q
    |||||||||    
T  4426509 atactacat 4426501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 273; E-Value: 1e-152
Query Start/End: Original strand, 409 - 717
Target Start/End: Complemental strand, 28393339 - 28393031
Alignment:
Q  409 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 508  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  28393339 aaggcatttctttattgattttgatttgtttcaaaataataaagtccctaaaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 28393240  T
Q  509 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagact 608  Q
    |||||||||||||||||||||||||| |||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  28393239 cccattaaacataaggaaactattcttaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtgggtagact 28393140  T
Q  609 gatgatcacatctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagtaatatttatattggattgatccgccatgaga 708  Q
    ||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  28393139 gatgatcacatctcacatatcatggataaagagttatcaagtcttcacatagatataaatattagaagtaatatttatattggattgatccgccatgaga 28393040  T
Q  709 atactacat 717  Q
    |||||||||    
T  28393039 atactacat 28393031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 263; E-Value: 1e-146
Query Start/End: Original strand, 419 - 717
Target Start/End: Original strand, 8858179 - 8858477
Alignment:
Q  419 tttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccattaaac 518  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||    
T  8858179 tttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagatcccgttaaac 8858278  T
Q  519 ataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgatcaca 618  Q
    |||||||||||||||| |||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||| ||||| ||||||||||||    
T  8858279 ataaggaaactattcttaaagtatccgtagtcaagctttattgagaagtcggatatcattaaagcatagagactattatgtgggtaggctgatgatcaca 8858378  T
Q  619 tctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagtaatatttatattggattgatccgccatgagaatactacat 717  Q
    |||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8858379 tctcacagatcatggataaagagttatcaagtcttcatatagatataaatattaggagtaatatttatattggattgatccgccatgagaatactacat 8858477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 255; E-Value: 1e-141
Query Start/End: Original strand, 419 - 717
Target Start/End: Original strand, 8845215 - 8845513
Alignment:
Q  419 tttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccattaaac 518  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||    
T  8845215 tttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagatcccgttaaac 8845314  T
Q  519 ataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgatcaca 618  Q
    |||||||||||||||| |||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||| ||||| ||||||||||||    
T  8845315 ataaggaaactattcttaaagtatccgtagtcaagctttattgagaagtcggatatcattaaagcatagagactattatgtgggtaggctgatgatcaca 8845414  T
Q  619 tctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagtaatatttatattggattgatccgccatgagaatactacat 717  Q
    |||||||||||||||||||||||||||| | |||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8845415 tctcacagatcatggataaagagttatcaattctttatatagatataaatattaggagtaatatttatattggattgatccgccatgagaatactacat 8845513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 172; E-Value: 5e-92
Query Start/End: Original strand, 415 - 717
Target Start/End: Original strand, 20311299 - 20311602
Alignment:
Q  415 tttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaag-tataacttaattgtgagaccccat 513  Q
    ||||||||||||||||||||||||| ||||||||||||| | || |||||||| |  ||| |||||| ||||||| ||||||||||||||||||||||||    
T  20311299 tttctttattgattttgttttgttttaaaataataaagtacttataatagttaatatgttcaatggagcattaaggtataacttaattgtgagaccccat 20311398  T
Q  514 taaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatga 613  Q
    |||||||||||| ||| || | |||||||  || |||||||||| ||| |||||| |||||||||||||||||||||||||| ||| |||||| ||||||    
T  20311399 taaacataaggacactgtttttaaagtatttgttgtcaagctttattgtgaagtgagatatcattaaagcatagagactattttgtgggtagattgatga 20311498  T
Q  614 tcacatctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagtaatatttatattggattgatccgccatgagaatact 713  Q
    |||||| |||  ||||||||||||||||||||| ||||||||||||||| ||||||||||||||||| ||||||||||||||| | | ||||||||||||    
T  20311499 tcacatatcatggatcatggataaagagttatcaagtcttcacatagatgtaaatattaggagtaatttttatattggattgacctgtcatgagaatact 20311598  T
Q  714 acat 717  Q
    ||||    
T  20311599 acat 20311602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 413 - 714
Target Start/End: Original strand, 35223576 - 35223867
Alignment:
Q  413 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacccca 512  Q
    ||||||||| ||||||||||||||||| ||||||||||||||||||||||| |||||| |||||||||| |||||||| | ||||||| || |           
T  35223576 catttctttgttgattttgttttgttttaaaataataaagtccctagaataattagtctgtttaatggagcattaagtgtgacttaatcgtaa------- 35223668  T
Q  513 ttaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatg 612  Q
       |||  ||||| | |||||| ||||||| |||||||||||||| |||  ||   ||||| |||||||||||| |||||||||||| ||||||| ||||    
T  35223669 ---aacgaaaggacattattcttaaagtattcgtagtcaagctttattgtaaaaaaggataacattaaagcatatagactattatgtgggtagacggatg 35223765  T
Q  613 atcacatctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagtaatatttatattggattgatccgccatgagaatac 712  Q
    |||||||||||| |||||| ||||||||||||||  ||||| |||||  |||||||||||||||||||||||||| |||||||| || ||||||||||||    
T  35223766 atcacatctcacggatcatagataaagagttatcatgtctttacatatgtataaatattaggagtaatatttatactggattgaaccaccatgagaatac 35223865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 413 - 717
Target Start/End: Complemental strand, 5668327 - 5668024
Alignment:
Q  413 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacccca 512  Q
    ||||||||| |||||||||||||||||||||||||||||||| |||||||| ||||||  ||||||||| |||||||| | | ||||| |||||| ||||    
T  5668327 catttctttgttgattttgttttgtttcaaaataataaagtctctagaataattagtctatttaatggagcattaagtgtgatttaatcgtgaga-ccca 5668229  T
Q  513 ttaaacataaggaaactattctcaaag--tatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagactga 610  Q
    |||||   ||||| | |||||| ||||  |||  ||||||||||||| ||| |||  | |||| ||||||| ||||||||||||||||| | ||||| ||    
T  5668228 ttaaatgaaaggacattattcttaaagtatatttgtagtcaagctttattgtgaaaagagataacattaaatcatagagactattatgtggatagaccga 5668129  T
Q  611 tgatcacatctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagtaatatttatattggattgatccgccatgagaat 710  Q
    ||||  |||||||| |||||| ||||||||||||||   ||||||| ||| |||||||||||||||||||||||||| ||||||||  | ||||||||||    
T  5668128 tgat--catctcacggatcatagataaagagttatcatatcttcacgtaggtataaatattaggagtaatatttatactggattgactcaccatgagaat 5668031  T
Q  711 actacat 717  Q
    |||||||    
T  5668030 actacat 5668024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 407 - 522
Target Start/End: Original strand, 12357136 - 12357251
Alignment:
Q  407 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 506  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12357136 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 12357235  T
Q  507 accccattaaacataa 522  Q
    ||||||||||||||||    
T  12357236 accccattaaacataa 12357251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 445 - 717
Target Start/End: Original strand, 56516094 - 56516366
Alignment:
Q  445 taataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccattaaacataaggaa-actattctcaaagtatc 543  Q
    ||||||||||| |||||||| | ||  |  ||||| |||||||| | | |||||||||||||||  |||||| ||||  ||| | ||||||  |||||||    
T  56516094 taataaagtccttagaatagatggttagagtaatgaaacattaattgtgacttaattgtgagacttcattaa-catatagaacattattcttgaagtatc 56516192  T
Q  544 cgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgatcacatctcacagatcatggataaagagtt 643  Q
      |||||||||||| ||| |||    ||||  |||||| |||||||||||||||||||||||| | ||||||| ||||||||||| ||||||||||||||    
T  56516193 tatagtcaagctttattgtgaataacgatagtattaaaacatagagactattatgtaggtagattaatgatcaaatctcacagataatggataaagagtt 56516292  T
Q  644 atccagtcttcacatagatataaatattaggagtaatatttatattggattgatccgccatgagaatactacat 717  Q
    ||| ||||||||||||  ||||||||| | |||||||||||||||||||||||  ||| ||||||| |||||||    
T  56516293 atcaagtcttcacatacgtataaatatcatgagtaatatttatattggattgactcgctatgagaacactacat 56516366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 413 - 631
Target Start/End: Complemental strand, 10677753 - 10677538
Alignment:
Q  413 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacccca 512  Q
    ||||| |||||||||||| ||||||||||| | ||||||| ||||| |||| |||||| || ||||||| |||||||||| ||||||| | |||| ||||    
T  10677753 catttttttattgattttcttttgtttcaataaaataaagcccctaaaataattagtctgtataatggagcattaagtatgacttaatcgcgaga-ccca 10677655  T
Q  513 ttaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatg 612  Q
    ||||||  || || | |||||| |||||||||||||||||||||  | | ||| || |||| |||||||| ||| |||||||||||| ||||||||||||    
T  10677654 ttaaacgaaatgatattattcttaaagtatccgtagtcaagctt--tagtgaaatgagataacattaaagtatatagactattatgtgggtagactgatg 10677557  T
Q  613 atcacatctcacagatcat 631  Q
    |||||||||||| ||||||    
T  10677556 atcacatctcacggatcat 10677538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 413 - 631
Target Start/End: Complemental strand, 10891393 - 10891178
Alignment:
Q  413 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacccca 512  Q
    ||||| |||||||||||| ||||||||||| | ||||||| ||||| |||| |||||| || ||||||| |||||||||| ||||||| | |||| ||||    
T  10891393 catttttttattgattttcttttgtttcaataaaataaagcccctaaaataattagtctgtataatggagcattaagtatgacttaatcgcgaga-ccca 10891295  T
Q  513 ttaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatg 612  Q
    ||||||  || || | |||||| |||||||||||||||||||||  | | ||| || |||| |||||||| ||| |||||||||||| ||||||||||||    
T  10891294 ttaaacgaaatgatattattcttaaagtatccgtagtcaagctt--tagtgaaatgagataacattaaagtatatagactattatgtgggtagactgatg 10891197  T
Q  613 atcacatctcacagatcat 631  Q
    |||||||||||| ||||||    
T  10891196 atcacatctcacggatcat 10891178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 409 - 716
Target Start/End: Original strand, 5616215 - 5616523
Alignment:
Q  409 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 508  Q
    |||||||||||||||| |||||||||||||||||||||||||||| |||| |||| ||||||  |||  ||||||||||||| | ||| |||  |||||     
T  5616215 aaggcatttctttattcattttgttttgtttcaaaataataaagttcctaaaataattagtctatttcttggaacattaagtctgactaaatcatgagat 5616314  T
Q  509 cccattaaacataaggaaactattctcaaagtatccgtagtcaa--gctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 606  Q
    ||| ||||||   |||| | |||||| ||||||||||| |||||  | ||| ||  ||| |||||||| | |||||||| |||||||||||||| |||||    
T  5616315 cccgttaaactagaggacattattcttaaagtatccgttgtcaaaggttttattatgaattgggatattaataaagcattgagactattatgtatgtaga 5616414  T
Q  607 ctgatgatcacatctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagtaatatttatattggattgatccgccatga 706  Q
     |||||| |||||||||  | ||||  || | ||| | |  ||| |  || ||| |||||||||||| ||||||||||||| |||||||| |  || |||    
T  5616415 ttgatgaccacatctcatgggtcataaat-atgagatgttaagtatatacgtaggtataaatattagaagtaatatttatactggattgaccaaccgtga 5616513  T
Q  707 gaatactaca 716  Q
    ||||||||||    
T  5616514 gaatactaca 5616523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 433 - 717
Target Start/End: Complemental strand, 21454319 - 21454036
Alignment:
Q  433 tttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaag-tataacttaattgtgagaccccattaaacataaggaaactat 531  Q
    ||||||||||| ||||||||| | |||||||||||||  | |||||||||||||||  | | |||||||  ||||||||||||||  |||| || | |||    
T  21454319 tttgtttcaaagtaataaagttcttagaatagttagtttgattaatggaacattaaaatgtgacttaatattgagaccccattaattataatgacattat 21454220  T
Q  532 tctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgatcacatctcacagatcat 631  Q
    | | ||| ||||  ||||||| |||| ||| ||| || |||| || ||| ||||| ||| ||||||||  ||||| |||||||||  ||||   ||| ||    
T  21454219 ttttaaaatatctatagtcaaactttattgtgaaatgagataacaataatgcataaagattattatgtgagtagattgatgatcatctctcgg-gataat 21454121  T
Q  632 ggataaagagttatccagtcttcacatagatataaatattaggagtaatatttatattggattgatccgccatgagaatactacat 717  Q
    |||    ||| |||| ||| |||||||| |||||||||||||||||||||||||||||| ||||| || |||||||||||||||||    
T  21454120 ggactt-gagatatcaagttttcacatacatataaatattaggagtaatatttatattgaattgacccaccatgagaatactacat 21454036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 578 - 717
Target Start/End: Original strand, 15461488 - 15461626
Alignment:
Q  578 taaagcatagagactattatgtaggtagactgatgatcacatctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagt 677  Q
    |||||| | |||||||||||||| |||||||||||| | |||||||  | |||| ||||  ||| |||| |||||  |||||||||||||||||||||||    
T  15461488 taaagcgtcgagactattatgtatgtagactgatgaccgcatctcatgggtcatagatat-gagatatcaagtctatacatagatataaatattaggagt 15461586  T
Q  678 aatatttatattggattgatccgccatgagaatactacat 717  Q
    ||||||||||||||||||| || || ||||||||||||||    
T  15461587 aatatttatattggattgacccaccgtgagaatactacat 15461626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 569 - 717
Target Start/End: Complemental strand, 32646846 - 32646698
Alignment:
Q  569 ggatatcattaaagcatagagactattatgtaggtagactgatgatcacatctcacagatcatggataaagagttatccagtcttcacatagatataaat 668  Q
    ||||| |||||||| ||  |||||||||||| | ||   ||||||||||||||||| |||||| |||||||   |||| |||||||||||||||||||||    
T  32646846 ggataacattaaagaatgaagactattatgtggatatgttgatgatcacatctcacggatcattgataaaggaatatcgagtcttcacatagatataaat 32646747  T
Q  669 attaggagtaatatttatattggattgatccgccatgagaatactacat 717  Q
    ||||||| ||||||||| |||||||||| |  |||| ||||| ||||||    
T  32646746 attaggaataatatttacattggattgacctaccataagaatgctacat 32646698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 578 - 717
Target Start/End: Original strand, 2677004 - 2677142
Alignment:
Q  578 taaagcatagagactattatgtaggtagactgatgatcacatctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagt 677  Q
    |||||| | |||||||||||||| |||||||||||| | |||||||  | |||| ||||  ||| |||| |||||  |||||||||||||||||||||||    
T  2677004 taaagcgtcgagactattatgtatgtagactgatgaccgcatctcatgggtcatagatat-gagatatcaagtctatacatagatataaatattaggagt 2677102  T
Q  678 aatatttatattggattgatccgccatgagaatactacat 717  Q
    ||||||||||||||||||| || |  ||||||||||||||    
T  2677103 aatatttatattggattgacccactgtgagaatactacat 2677142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 578 - 717
Target Start/End: Original strand, 15815012 - 15815150
Alignment:
Q  578 taaagcatagagactattatgtaggtagactgatgatcacatctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagt 677  Q
    |||||| | |||||||||||||| |||||||||||| | |||||||  | |||| ||||  ||| |||| |||||  |||||||||||||||||||||||    
T  15815012 taaagcgtcgagactattatgtatgtagactgatgaccgcatctcatgggtcatagatat-gagatatcaagtctatacatagatataaatattaggagt 15815110  T
Q  678 aatatttatattggattgatccgccatgagaatactacat 717  Q
    ||||||||||||||||||| || |  ||||||||||||||    
T  15815111 aatatttatattggattgacccactgtgagaatactacat 15815150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 578 - 717
Target Start/End: Complemental strand, 17300270 - 17300132
Alignment:
Q  578 taaagcatagagactattatgtaggtagactgatgatcacatctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagt 677  Q
    |||||| | |||||||||||||| |||||||||||| | |||||||  | |||| ||||  ||| |||| |||||  |||||||||||||||||||||||    
T  17300270 taaagcgtcgagactattatgtatgtagactgatgaccgcatctcatgggtcatagatat-gagatatcaagtctatacatagatataaatattaggagt 17300172  T
Q  678 aatatttatattggattgatccgccatgagaatactacat 717  Q
    ||||||||||||||||||| || |  ||||||||||||||    
T  17300171 aatatttatattggattgacccactgtgagaatactacat 17300132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 578 - 717
Target Start/End: Complemental strand, 18111354 - 18111216
Alignment:
Q  578 taaagcatagagactattatgtaggtagactgatgatcacatctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagt 677  Q
    |||||| | |||||||||||||| |||||||||||| | |||||||  | |||| ||||  ||| |||| |||||  |||||||||||||||||||||||    
T  18111354 taaagcgtcgagactattatgtatgtagactgatgaccgcatctcatgggtcatagatat-gagatatcaagtctatacatagatataaatattaggagt 18111256  T
Q  678 aatatttatattggattgatccgccatgagaatactacat 717  Q
    ||||||||||||||||||| || |  ||||||||||||||    
T  18111255 aatatttatattggattgacccactgtgagaatactacat 18111216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 578 - 717
Target Start/End: Original strand, 34975542 - 34975680
Alignment:
Q  578 taaagcatagagactattatgtaggtagactgatgatcacatctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagt 677  Q
    |||||| | |||||||||||||| |||||||||||| | |||||||  | |||| ||||  ||| |||| |||||  |||||||||||||||||||||||    
T  34975542 taaagcgtcgagactattatgtatgtagactgatgaccgcatctcatgggtcatagatat-gagatatcaagtctatacatagatataaatattaggagt 34975640  T
Q  678 aatatttatattggattgatccgccatgagaatactacat 717  Q
    ||||||||||||||||||| || |  ||||||||||||||    
T  34975641 aatatttatattggattgacccactgtgagaatactacat 34975680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 588 - 717
Target Start/End: Original strand, 5870419 - 5870547
Alignment:
Q  588 agactattatgtaggtagactgatgatcacatctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagtaatatttata 687  Q
    ||||||||||||| |||||||||||| | |||||||  | |||| ||||  ||| |||| |||||  |||||||||||||||||||||||||||||||||    
T  5870419 agactattatgtatgtagactgatgaccgcatctcatgggtcatagatat-gagatatcaagtctatacatagatataaatattaggagtaatatttata 5870517  T
Q  688 ttggattgatccgccatgagaatactacat 717  Q
    ||||||||| || |  ||||||||||||||    
T  5870518 ttggattgacccactgtgagaatactacat 5870547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 578 - 717
Target Start/End: Complemental strand, 3369334 - 3369196
Alignment:
Q  578 taaagcatagagactattatgtaggtagactgatgatcacatctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagt 677  Q
    |||||| | |||||||||||||| |||||||||||| | |||||||  | |||| ||||  ||| |||| |||||  |||||||||||||||||||||||    
T  3369334 taaagcgtcgagactattatgtatgtagactgatgaccgcatctcatgggtcatagatat-gagatatcaagtctatacatagatataaatattaggagt 3369236  T
Q  678 aatatttatattggattgatccgccatgagaatactacat 717  Q
    ||||||| ||||||||||| || |  ||||||||||||||    
T  3369235 aatatttgtattggattgacccactgtgagaatactacat 3369196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 315 - 371
Target Start/End: Original strand, 5713856 - 5713912
Alignment:
Q  315 tgttgggataagccctaatagccaatctatattgattgggtttggctttgtatcatg 371  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5713856 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 5713912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 315 - 371
Target Start/End: Complemental strand, 19927059 - 19927003
Alignment:
Q  315 tgttgggataagccctaatagccaatctatattgattgggtttggctttgtatcatg 371  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19927059 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 19927003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 315 - 371
Target Start/End: Original strand, 26963548 - 26963604
Alignment:
Q  315 tgttgggataagccctaatagccaatctatattgattgggtttggctttgtatcatg 371  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26963548 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 26963604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 315 - 371
Target Start/End: Original strand, 26970371 - 26970427
Alignment:
Q  315 tgttgggataagccctaatagccaatctatattgattgggtttggctttgtatcatg 371  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26970371 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 26970427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 578 - 717
Target Start/End: Complemental strand, 4676294 - 4676156
Alignment:
Q  578 taaagcatagagactattatgtaggtagactgatgatcacatctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagt 677  Q
    |||||| | |||||||||||||| |||||||||||| | |||||||  | |||| ||||  ||| |||  |||||  ||||||||||||||||||| |||    
T  4676294 taaagcgtcgagactattatgtatgtagactgatgaccgcatctcatgggtcatagatat-gagatattaagtctatacatagatataaatattagaagt 4676196  T
Q  678 aatatttatattggattgatccgccatgagaatactacat 717  Q
    ||||||||||||||||||| || |  ||||||||||||||    
T  4676195 aatatttatattggattgacccactgtgagaatactacat 4676156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 578 - 717
Target Start/End: Original strand, 18163153 - 18163291
Alignment:
Q  578 taaagcatagagactattatgtaggtagactgatgatcacatctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagt 677  Q
    |||||| | |||||||||||||| |||||||||||||| |||||||  | |||| ||||  ||| |||  |||||  ||||||||||||||||||| |||    
T  18163153 taaagcgtcgagactattatgtatgtagactgatgatcgcatctcatgggtcatagatat-gagatattaagtctatacatagatataaatattagaagt 18163251  T
Q  678 aatatttatattggattgatccgccatgagaatactacat 717  Q
    ||||||||||||||||| | || |  ||||||||||||||    
T  18163252 aatatttatattggattcacccactgtgagaatactacat 18163291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 578 - 717
Target Start/End: Original strand, 20243928 - 20244066
Alignment:
Q  578 taaagcatagagactattatgtaggtagactgatgatcacatctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagt 677  Q
    |||||| | |||||||||||||| |||||||||||| | |||||||  | |||| ||||  ||| |||  |||||  ||||||||||||||||||| |||    
T  20243928 taaagcgtcgagactattatgtatgtagactgatgaccgcatctcatgggtcatagatat-gagatattaagtctatacatagatataaatattagaagt 20244026  T
Q  678 aatatttatattggattgatccgccatgagaatactacat 717  Q
    ||||||||||||||||||| || |  ||||||||||||||    
T  20244027 aatatttatattggattgacccactgtgagaatactacat 20244066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 578 - 717
Target Start/End: Original strand, 26531604 - 26531742
Alignment:
Q  578 taaagcatagagactattatgtaggtagactgatgatcacatctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagt 677  Q
    |||||| | |||||||||||||| |||||||||||| | |||||||  | |||| ||||  ||| |||| || ||  ||||| |||||||||||||||||    
T  26531604 taaagcgtcgagactattatgtatgtagactgatgaccgcatctcatgggtcatagatat-gagatatcaaggctatacataaatataaatattaggagt 26531702  T
Q  678 aatatttatattggattgatccgccatgagaatactacat 717  Q
    ||||||||||||||||||| || |  ||||||||||||||    
T  26531703 aatatttatattggattgacccactgtgagaatactacat 26531742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 591 - 669
Target Start/End: Original strand, 24700213 - 24700291
Alignment:
Q  591 ctattatgtaggtagactgatgatcacatctcacagatcatggataaagagttatccagtcttcacatagatataaata 669  Q
    ||||||||| ||||||||||| ||||||||| ||||||| ||||||||||| |||  ||||||||||||||||||||||    
T  24700213 ctattatgtgggtagactgataatcacatcttacagatcttggataaagagatattaagtcttcacatagatataaata 24700291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 314 - 371
Target Start/End: Original strand, 5707227 - 5707284
Alignment:
Q  314 ctgttgggataagccctaatagccaatctatattgattgggtttggctttgtatcatg 371  Q
    ||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  5707227 ctgttggaataagccctaatagccaatctatattgattgtgtttggctttgtatcatg 5707284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 315 - 371
Target Start/End: Complemental strand, 10621632 - 10621576
Alignment:
Q  315 tgttgggataagccctaatagccaatctatattgattgggtttggctttgtatcatg 371  Q
    |||||| |||||||||||||||||||||||||||||||| |||||||||||||||||    
T  10621632 tgttggaataagccctaatagccaatctatattgattggttttggctttgtatcatg 10621576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 315 - 371
Target Start/End: Original strand, 12357044 - 12357100
Alignment:
Q  315 tgttgggataagccctaatagccaatctatattgattgggtttggctttgtatcatg 371  Q
    |||||| |||||||||||||||||||||||||||||||| |||||||||||||||||    
T  12357044 tgttggaataagccctaatagccaatctatattgattggatttggctttgtatcatg 12357100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 317 - 371
Target Start/End: Original strand, 868507 - 868561
Alignment:
Q  317 ttgggataagccctaatagccaatctatattgattgggtttggctttgtatcatg 371  Q
    |||| |||| |||||||||||||||||||||||||||||||||||||||||||||    
T  868507 ttggaataaaccctaatagccaatctatattgattgggtttggctttgtatcatg 868561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 313 - 371
Target Start/End: Original strand, 55612592 - 55612650
Alignment:
Q  313 actgttgggataagccctaatagccaatctatattgattgggtttggctttgtatcatg 371  Q
    |||||| | ||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  55612592 actgttagaataagccctaataaccaatctatattgattgggtttggctttgtatcatg 55612650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 315 - 371
Target Start/End: Complemental strand, 10628711 - 10628655
Alignment:
Q  315 tgttgggataagccctaatagccaatctatattgattgggtttggctttgtatcatg 371  Q
    |||||| |||||||||||||||||||||||||||||||| |||| ||||||||||||    
T  10628711 tgttggaataagccctaatagccaatctatattgattggttttgactttgtatcatg 10628655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 315 - 371
Target Start/End: Complemental strand, 17142428 - 17142372
Alignment:
Q  315 tgttgggataagccctaatagccaatctatattgattgggtttggctttgtatcatg 371  Q
    |||||| | ||||||||||||||||||||||||||||||||||| ||||||||||||    
T  17142428 tgttggaaaaagccctaatagccaatctatattgattgggtttgactttgtatcatg 17142372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 313 - 369
Target Start/End: Complemental strand, 28393436 - 28393380
Alignment:
Q  313 actgttgggataagccctaatagccaatctatattgattgggtttggctttgtatca 369  Q
    ||||||||  |||||||||||||||||||||||||||||||||||| ||||||||||    
T  28393436 actgttggagtaagccctaatagccaatctatattgattgggtttgactttgtatca 28393380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 578 - 717
Target Start/End: Original strand, 1941715 - 1941853
Alignment:
Q  578 taaagcatagagactattatgtaggtagactgatgatcacatctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagt 677  Q
    |||||| | ||||||||||||||  ||||||||||| | |||||||  | | || ||||  ||| |||  |||||  |||||| ||||||||||||||||    
T  1941715 taaagcgtcgagactattatgtatatagactgatgaccgcatctcatgggttatagatat-gagatattaagtctatacataggtataaatattaggagt 1941813  T
Q  678 aatatttatattggattgatccgccatgagaatactacat 717  Q
    ||||||||||||||||| | || || ||||||||||||||    
T  1941814 aatatttatattggattaacccaccgtgagaatactacat 1941853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 323 - 371
Target Start/End: Complemental strand, 4426895 - 4426847
Alignment:
Q  323 taagccctaatagccaatctatattgattgggtttggctttgtatcatg 371  Q
    |||| |||||||||||||||||||||||||||||||||| |||||||||    
T  4426895 taagtcctaatagccaatctatattgattgggtttggctctgtatcatg 4426847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 315 - 371
Target Start/End: Original strand, 18268976 - 18269032
Alignment:
Q  315 tgttgggataagccctaatagccaatctatattgattgggtttggctttgtatcatg 371  Q
    |||||| |||||||| |||||||||||||| |||| |||||||||||||||||||||    
T  18268976 tgttggaataagcccaaatagccaatctatgttgaatgggtttggctttgtatcatg 18269032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 456 - 523
Target Start/End: Complemental strand, 39074346 - 39074278
Alignment:
Q  456 ctagaatagttagtccgtttaa-tggaacattaagtataacttaattgtgagaccccattaaacataag 523  Q
    |||||||| ||||||||||||| | ||||||||||||| |||||||  |||||||||||||||||||||    
T  39074346 ctagaataattagtccgtttaaattgaacattaagtatgacttaatcatgagaccccattaaacataag 39074278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 662 - 717
Target Start/End: Complemental strand, 10677534 - 10677479
Alignment:
Q  662 tataaatattaggagtaatatttatattggattgatccgccatgagaatactacat 717  Q
    |||||||||||||||||||||||||| |||||||| || | |||||||||||||||    
T  10677534 tataaatattaggagtaatatttatactggattgacccactatgagaatactacat 10677479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 662 - 717
Target Start/End: Complemental strand, 10891174 - 10891119
Alignment:
Q  662 tataaatattaggagtaatatttatattggattgatccgccatgagaatactacat 717  Q
    |||||||||||||||||||||||||| |||||||| || | |||||||||||||||    
T  10891174 tataaatattaggagtaatatttatactggattgacccactatgagaatactacat 10891119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 655 - 717
Target Start/End: Original strand, 19365586 - 19365648
Alignment:
Q  655 acatagatataaatattaggagtaatatttatattggattgatccgccatgagaatactacat 717  Q
    |||||| |||||||||||||||||||||||||| |||||||| || || ||||| ||||||||    
T  19365586 acataggtataaatattaggagtaatatttatactggattgacccaccgtgagagtactacat 19365648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 218 - 306
Target Start/End: Original strand, 21556849 - 21556935
Alignment:
Q  218 atatagatagagttgcgctgagactaaatttcaataactattcctcatatgtttcctcttaatcgattgtatatactttttatgcctca 306  Q
    ||||| ||||||||| | || || | ||||||||||| |||| |||||||| || |||||||||||||||||||  |||||||||||||    
T  21556849 atatatatagagttgtgttgggattgaatttcaataaatatttctcatatggttactcttaatcgattgtatat--tttttatgcctca 21556935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 322 - 371
Target Start/End: Original strand, 55992680 - 55992729
Alignment:
Q  322 ataagccctaatagccaatctatattgattgggtttggctttgtatcatg 371  Q
    ||||||||||||||||||| | ||||||||||||||| ||||||||||||    
T  55992680 ataagccctaatagccaatttgtattgattgggtttgactttgtatcatg 55992729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 544 - 624
Target Start/End: Complemental strand, 39074270 - 39074190
Alignment:
Q  544 cgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgatcacatctcac 624  Q
    ||||||||  |||| ||| |||||| |||||||||||||||| |||||||||| || ||| || || ||||||||||||||    
T  39074270 cgtagtcatactttattgtgaagtgagatatcattaaagcatggagactattacgtgggttgattgttgatcacatctcac 39074190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 578 - 717
Target Start/End: Original strand, 4546071 - 4546209
Alignment:
Q  578 taaagcatagagactattatgtaggtagactgatgatcacatctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagt 677  Q
    |||||| | |||||||||||||| || ||||||| ||| |||||||  | | || ||||  ||| |||  |||||  |||||| ||||||||||||||||    
T  4546071 taaagcgtcgagactattatgtatgttgactgataatcgcatctcatgggttatagatat-gagatattaagtctatacataggtataaatattaggagt 4546169  T
Q  678 aatatttatattggattgatccgccatgagaatactacat 717  Q
    |||||||||| ||||  || || || ||||||||||||||    
T  4546170 aatatttatactggacagacccaccgtgagaatactacat 4546209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 578 - 717
Target Start/End: Original strand, 32636475 - 32636613
Alignment:
Q  578 taaagcatagagactattatgtaggtagactgatgatcacatctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagt 677  Q
    |||||| | |||||||||||||| |||||||||||| | |||||||  | ||||| |||  ||| |||  ||||    ||||| ||||||||||| ||||    
T  32636475 taaagcgtggagactattatgtatgtagactgatgaccgcatctcatgggtcatgaatac-gagatattaagtccatgcataggtataaatattatgagt 32636573  T
Q  678 aatatttatattggattgatccgccatgagaatactacat 717  Q
    ||||||||||||||||||| ||    ||||||||||||||    
T  32636574 aatatttatattggattgacccaatgtgagaatactacat 32636613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 563 - 645
Target Start/End: Complemental strand, 9938015 - 9937933
Alignment:
Q  563 gaagtgggatatcattaaagcatagagactattatgtaggtagactgatgatcacatctcacagatcatggataaagagttat 645  Q
    |||||| |||| |||  ||||||| |||||||| ||| |||||| | |||||||||||||| | |||||| ||||||||||||    
T  9938015 gaagtgagatagcatcgaagcatatagactattgtgtgggtagagtcatgatcacatctcataaatcatgaataaagagttat 9937933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 634 - 716
Target Start/End: Complemental strand, 34777975 - 34777893
Alignment:
Q  634 ataaagagttatccagtcttcacatagatataaatattaggagtaatatttatattggattgatccgccatgagaatactaca 716  Q
    ||||| ||||||| |||||||| |||  ||||||||| | ||||||| ||| |||| |||||| || ||||||||||||||||    
T  34777975 ataaaaagttatcaagtcttcaaatatgtataaatataatgagtaatttttgtattagattgaccctccatgagaatactaca 34777893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 330 - 371
Target Start/End: Complemental strand, 5668412 - 5668371
Alignment:
Q  330 taatagccaatctatattgattgggtttggctttgtatcatg 371  Q
    ||||||||||||||||||||||| |||||| |||||||||||    
T  5668412 taatagccaatctatattgattgtgtttggttttgtatcatg 5668371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 252 - 315
Target Start/End: Complemental strand, 10584151 - 10584091
Alignment:
Q  252 taactattcctcatatgtttcctcttaatcgattgtatatactttttatgcctcagatacaact 315  Q
    |||||||| ||||||||||||||||||||| ||||||||   |||||||| |||||||| ||||    
T  10584151 taactattactcatatgtttcctcttaatcaattgtata---tttttatgtctcagatataact 10584091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 323 - 371
Target Start/End: Original strand, 8845118 - 8845166
Alignment:
Q  323 taagccctaatagccaatctatattgattgggtttggctttgtatcatg 371  Q
    |||| ||||||||||||||||| ||||||| ||||| ||||||||||||    
T  8845118 taagtcctaatagccaatctatgttgattgagtttgactttgtatcatg 8845166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 323 - 371
Target Start/End: Original strand, 8858082 - 8858130
Alignment:
Q  323 taagccctaatagccaatctatattgattgggtttggctttgtatcatg 371  Q
    |||| ||||||||||||||||| ||||||| ||||| ||||||||||||    
T  8858082 taagtcctaatagccaatctatgttgattgagtttgactttgtatcatg 8858130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 331 - 371
Target Start/End: Original strand, 18262136 - 18262176
Alignment:
Q  331 aatagccaatctatattgattgggtttggctttgtatcatg 371  Q
    |||||||||||||| |||| |||||||||||||||||||||    
T  18262136 aatagccaatctatgttgaatgggtttggctttgtatcatg 18262176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 445 - 623
Target Start/End: Complemental strand, 30040919 - 30040740
Alignment:
Q  445 taataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccattaaacataaggaa-actattctcaaa-gtat 542  Q
    ||||||||| |||||||||| |||| ||| |||| | | ||||||| | |||||||  |||||   |||||| ||||| ||| |||||||| ||| ||||    
T  30040919 taataaagttcctagaatagatagttcgtgtaatagtatattaagtgtgacttaatcatgagattacattaa-cataaagaacactattcttaaatgtat 30040821  T
Q  543 ccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgatcacatctca 623  Q
    |  ||||||||| ||  |  ||| |||||||  | |||||||| ||||||||||||||  ||||||||||| |||||||||    
T  30040820 ctatagtcaagcgttaatatgaattgggataataataaagcatcgagactattatgtatatagactgatgaccacatctca 30040740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 662 - 717
Target Start/End: Original strand, 9487625 - 9487680
Alignment:
Q  662 tataaatattaggagtaatatttatattggattgatccgccatgagaatactacat 717  Q
    |||||||||||||||||||||||||| ||||| || ||  | ||||||||||||||    
T  9487625 tataaatattaggagtaatatttatactggatagacccatcgtgagaatactacat 9487680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 662 - 717
Target Start/End: Original strand, 9538033 - 9538088
Alignment:
Q  662 tataaatattaggagtaatatttatattggattgatccgccatgagaatactacat 717  Q
    ||||||| |||||||||||||||||| |||||||| ||  | ||||||||||||||    
T  9538033 tataaatgttaggagtaatatttatactggattgacccagcgtgagaatactacat 9538088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 457 - 516
Target Start/End: Complemental strand, 11161972 - 11161913
Alignment:
Q  457 tagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccattaa 516  Q
    ||||||||||| || |||||||||||||  |||| | ||||||||||||||| |||||||    
T  11161972 tagaatagttaatcagtttaatggaacacaaagtgtgacttaattgtgagactccattaa 11161913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 655 - 717
Target Start/End: Original strand, 19362477 - 19362539
Alignment:
Q  655 acatagatataaatattaggagtaatatttatattggattgatccgccatgagaatactacat 717  Q
    |||||| ||| |||||||||||||||||||||| |||||||| ||  | ||||| ||||||||    
T  19362477 acataggtattaatattaggagtaatatttatactggattgacccatcgtgagagtactacat 19362539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 578 - 623
Target Start/End: Original strand, 11421007 - 11421052
Alignment:
Q  578 taaagcatagagactattatgtaggtagactgatgatcacatctca 623  Q
    |||||| | |||||||||||||| |||||||||||| |||||||||    
T  11421007 taaagcttcgagactattatgtatgtagactgatgaccacatctca 11421052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 330 - 371
Target Start/End: Original strand, 20311220 - 20311261
Alignment:
Q  330 taatagccaatctatattgattgggtttggctttgtatcatg 371  Q
    ||||||||||||| |||| ||||| |||||||||||||||||    
T  20311220 taatagccaatctgtattcattggatttggctttgtatcatg 20311261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0390 (Bit Score: 295; Significance: 1e-165; HSPs: 4)
Name: scaffold0390
Description:

Target: scaffold0390; HSP #1
Raw Score: 295; E-Value: 1e-165
Query Start/End: Original strand, 407 - 717
Target Start/End: Complemental strand, 7141 - 6831
Alignment:
Q  407 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 506  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  7141 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaactgtgag 7042  T
Q  507 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 606  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  7041 accctattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 6942  T
Q  607 ctgatgatcacatctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagtaatatttatattggattgatccgccatga 706  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6941 ctgatgatcacatctcacagatcatggataaagagttatcaagtcttcacatagatataaatattaggagtaatatttatattggattgatccgccatga 6842  T
Q  707 gaatactacat 717  Q
    |||||||||||    
T  6841 gaatactacat 6831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0390; HSP #2
Raw Score: 283; E-Value: 1e-158
Query Start/End: Original strand, 407 - 717
Target Start/End: Complemental strand, 14157 - 13847
Alignment:
Q  407 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 506  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||    
T  14157 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctacaatagttagtccgtttaatggaacattaagtataacttaactgtgag 14058  T
Q  507 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 606  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||    
T  14057 accccattaaacataaggaaactattctcaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcataaagactattatgtaggtaga 13958  T
Q  607 ctgatgatcacatctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagtaatatttatattggattgatccgccatga 706  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  13957 ctgatgatcacatctcacagatcatggataaagagttatcaagtcttcacaaagatataaatattaggagtaatatttatattggattgatccgccatga 13858  T
Q  707 gaatactacat 717  Q
    |||||||||||    
T  13857 gaatactacat 13847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0390; HSP #3
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 313 - 371
Target Start/End: Complemental strand, 14251 - 14193
Alignment:
Q  313 actgttgggataagccctaatagccaatctatattgattgggtttggctttgtatcatg 371  Q
    |||||||| ||||||||||||||||||||||||||||||| |||||| |||||||||||    
T  14251 actgttggaataagccctaatagccaatctatattgattgagtttggttttgtatcatg 14193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0390; HSP #4
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 315 - 371
Target Start/End: Complemental strand, 7233 - 7177
Alignment:
Q  315 tgttgggataagccctaatagccaatctatattgattgggtttggctttgtatcatg 371  Q
    |||||| ||||||||||||||||||||||||||||||| |||||| |||||||||||    
T  7233 tgttggaataagccctaatagccaatctatattgattgagtttggttttgtatcatg 7177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 295; Significance: 1e-165; HSPs: 41)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 295; E-Value: 1e-165
Query Start/End: Original strand, 407 - 717
Target Start/End: Original strand, 21940665 - 21940975
Alignment:
Q  407 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 506  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21940665 acaatgcatttctttattgattttgttttgtttcaaaataataaagttcctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 21940764  T
Q  507 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 606  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  21940765 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 21940864  T
Q  607 ctgatgatcacatctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagtaatatttatattggattgatccgccatga 706  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21940865 ctgatgatcacatctcacagatcatggataaagagttatcaagtcttcacatagatataaatattaggagtaatatttatattggattgatccgccatga 21940964  T
Q  707 gaatactacat 717  Q
    |||||||||||    
T  21940965 gaatactacat 21940975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 266; E-Value: 1e-148
Query Start/End: Original strand, 413 - 714
Target Start/End: Original strand, 6094129 - 6094430
Alignment:
Q  413 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacccca 512  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  6094129 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccg 6094228  T
Q  513 ttaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatg 612  Q
    |||||||||||||||||||| | |||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| | |||||| |||||    
T  6094229 ttaaacataaggaaactatttttaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatatgggtagagtgatg 6094328  T
Q  613 atcacatctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagtaatatttatattggattgatccgccatgagaatac 712  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6094329 atcacatctcacagatcatggataaagagttatcaagtcttcacatagatataaatattaggagtaatatttatattggattgatccgccatgagaatac 6094428  T
Q  713 ta 714  Q
    ||    
T  6094429 ta 6094430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 262; E-Value: 1e-146
Query Start/End: Original strand, 409 - 717
Target Start/End: Original strand, 22171491 - 22171797
Alignment:
Q  409 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 508  Q
    |||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  22171491 aaggcatttccttattgattttgttttatttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagac 22171590  T
Q  509 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagact 608  Q
    |||||||||||||  |||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  22171591 cccattaaacata--gaaactattctcaaagtatccgtagtcaagctttattgagaagtggaatatcattaaagcatagagactattatgtaggtagact 22171688  T
Q  609 gatgatcacatctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagtaatatttatattggattgatccgccatgaga 708  Q
    ||||||||||||||| |||||||||||||||||||||| |||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||    
T  22171689 gatgatcacatctcatagatcatggataaagagttatcaagtcttcacataaatataaatattatgagtaatatttatattggattgatccgccatgaga 22171788  T
Q  709 atactacat 717  Q
    |||||||||    
T  22171789 atactacat 22171797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 261; E-Value: 1e-145
Query Start/End: Original strand, 413 - 717
Target Start/End: Original strand, 24642655 - 24642959
Alignment:
Q  413 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacccca 512  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||     
T  24642655 catttctttattgattttgttttgtttcaaaatcataaagtccctagaattgttagtccgtttaatggaacattaagtataacttaattgtgagaccccg 24642754  T
Q  513 ttaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatg 612  Q
    |||||||||||||||||||||| ||||||| |||||||||||||| |||||||||| ||||||||||||| |||||||||||||||| ||||||||||||    
T  24642755 ttaaacataaggaaactattcttaaagtattcgtagtcaagctttattgagaagtgagatatcattaaagtatagagactattatgtgggtagactgatg 24642854  T
Q  613 atcacatctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagtaatatttatattggattgatccgccatgagaatac 712  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  24642855 atcacatctcacagatcatggataaagagttatcaagtcttcacatagatataaatattaggagtaatatttatattggattgatcctccatgagaatac 24642954  T
Q  713 tacat 717  Q
    |||||    
T  24642955 tacat 24642959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 176; E-Value: 2e-94
Query Start/End: Original strand, 409 - 608
Target Start/End: Original strand, 28554885 - 28555084
Alignment:
Q  409 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 508  Q
    |||||||||||||||||||||||||| |||||||||||||||| | |||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  28554885 aaggcatttctttattgattttgtttagtttcaaaataataaaatacctaaaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 28554984  T
Q  509 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagact 608  Q
    |||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28554985 cccattaaacataatgaaactattctaaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagact 28555084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 115; E-Value: 5e-58
Query Start/End: Original strand, 419 - 717
Target Start/End: Complemental strand, 38232570 - 38232274
Alignment:
Q  419 tttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccattaaac 518  Q
    ||||||||||||||||| ||||||||||||||| || ||||||||||||||| |||||||  |   ||| ||||||||||||  ||| || |||||||||    
T  38232570 tttattgattttgttttatttcaaaataataaa-tctctagaatagttagtctgtttaataaatttttaggtataacttaatcatgacactccattaaac 38232472  T
Q  519 ataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgatcaca 618  Q
     |||  | | |||||| |||||||  |||||||| |||| |||  ||||| ||||   |||||||||| | |||||| ||| ||||||||||| ||||||    
T  38232471 gtaaa-atagtattcttaaagtatttgtagtcaaactttattgtaaagtgagatagtcttaaagcataaaaactattttgtgggtagactgataatcaca 38232373  T
Q  619 tctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagtaatatttatattggattgatccgccatgagaatactacat 717  Q
    |||||| ||||||||||||||||| |||||||||| ||||||||| | |||||| | ||||||||||||||||||||||||||| ||||||| ||||||    
T  38232372 tctcacggatcatggataaagagtgatccagtcttgacatagatacacatattatgggtaatatttatattggattgatccgccgtgagaatgctacat 38232274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 413 - 540
Target Start/End: Original strand, 24636860 - 24636987
Alignment:
Q  413 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacccca 512  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||     
T  24636860 catttctttcttgattttgttttgtttcaaaataataaagtccctagaatagttagtccttttaatggaacattaagtataacttaattgtgagaccccg 24636959  T
Q  513 ttaaacataaggaaactattctcaaagt 540  Q
    |||||||||||||||||||||| |||||    
T  24636960 ttaaacataaggaaactattcttaaagt 24636987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 503 - 717
Target Start/End: Complemental strand, 14984030 - 14983818
Alignment:
Q  503 tgagaccccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtagg 602  Q
    |||||||| |||||||   |||| | |||||| ||||||||  || ||||  ||| ||| ||||||||||| |||||| | |||| ||||||||||| ||    
T  14984030 tgagacccaattaaactataggacattattcttaaagtatctataatcaaaatttattgtgaagtgggataacattaa-gaatagggactattatgtggg 14983932  T
Q  603 tagactgatgatcacatctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagtaatatttatattggattgatccgcc 702  Q
    |||||| ||||||| ||||||| ||||||||| |||| |||||| ||||||||||||||| || ||||||||||||||| ||||||| || ||| |||||    
T  14983931 tagactaatgatcatatctcacggatcatggaaaaagtgttatcaagtcttcacatagatgtagatattaggagtaata-ttatattagaatgacccgcc 14983833  T
Q  703 atgagaatactacat 717  Q
    |||||||||||||||    
T  14983832 atgagaatactacat 14983818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 631 - 717
Target Start/End: Original strand, 15326422 - 15326508
Alignment:
Q  631 tggataaagagttatccagtcttcacatagatataaatattaggagtaatatttatattggattgatccgccatgagaatactacat 717  Q
    |||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15326422 tggagaaagagttatcaagtcttcacatagatataaatattaggagtaatatttatattggattgatccgccatgagaatactacat 15326508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 631 - 717
Target Start/End: Original strand, 15506791 - 15506877
Alignment:
Q  631 tggataaagagttatccagtcttcacatagatataaatattaggagtaatatttatattggattgatccgccatgagaatactacat 717  Q
    |||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15506791 tggagaaagagttatcaagtcttcacatagatataaatattaggagtaatatttatattggattgatccgccatgagaatactacat 15506877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 437 - 714
Target Start/End: Complemental strand, 32873019 - 32872741
Alignment:
Q  437 tttcaaaataataaagtccctagaatagttagtccgttta-atggaacattaagtataacttaattgtgagaccccattaaacataaggaaactattctc 535  Q
    ||||||||||||||||||| || |||||||  ||| |||| || ||||||||||||| |||||||||||||| | |||| || | |  || | || | |     
T  32873019 tttcaaaataataaagtccttataatagttcatccatttatatagaacattaagtatgacttaattgtgagatctcattgaaaagagtgacaatactatt 32872920  T
Q  536 aaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgatcacatctcacagatcatggat 635  Q
    ||| |||  ||||| ||| ||| ||| ||||||||||| ||| ||||||||||||||||||||  | | |||| | ||||  ||||||||||||||| ||    
T  32872919 aaaatatttgtagttaagatttattgtgaagtgggataacatcaaagcatagagactattatgcggctggactcacgatcttatctcacagatcatgaat 32872820  T
Q  636 aaagagttatccagtcttcacatagatataaatattaggagtaatatttatattggattgatccgccatgagaatacta 714  Q
    |||||| |||| |||||| |||| |  |||| |||||| | |||||||||||||| ||||||| | |||||||||||||    
T  32872819 aaagaggtatcaagtctttacatcggcataagtattagtaataatatttatattgaattgatctgtcatgagaatacta 32872741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 578 - 717
Target Start/End: Original strand, 21969324 - 21969462
Alignment:
Q  578 taaagcatagagactattatgtaggtagactgatgatcacatctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagt 677  Q
    |||||| | |||||||||||||| |||||||||||| | |||||||  |||||| ||||  ||| |||| |||||  |||||||||||||||||||||||    
T  21969324 taaagcgtcgagactattatgtatgtagactgatgaccgcatctcatggatcatagatat-gagatatcaagtctatacatagatataaatattaggagt 21969422  T
Q  678 aatatttatattggattgatccgccatgagaatactacat 717  Q
    ||||||||||||||||||| || || ||||||||||||||    
T  21969423 aatatttatattggattgacccaccgtgagaatactacat 21969462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 578 - 717
Target Start/End: Original strand, 12562114 - 12562252
Alignment:
Q  578 taaagcatagagactattatgtaggtagactgatgatcacatctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagt 677  Q
    |||||| | |||||||||||||| |||||||||||| | |||||||  | |||| ||||  ||| |||| |||||  |||||||||||||||||||||||    
T  12562114 taaagcgtcgagactattatgtatgtagactgatgaccgcatctcatgggtcatagatat-gagatatcaagtctatacatagatataaatattaggagt 12562212  T
Q  678 aatatttatattggattgatccgccatgagaatactacat 717  Q
    ||||||||||||||||||| || || ||||||||||||||    
T  12562213 aatatttatattggattgacccaccgtgagaatactacat 12562252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 428 - 717
Target Start/End: Original strand, 2375027 - 2375321
Alignment:
Q  428 tttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccattaaacataaggaaa 527  Q
    |||||||||||||||||||||||| |||||| |||| ||||||  |||||||||||||| |  || |||||||  ||| |||| |||||||||| | | |    
T  2375027 tttgttttgtttcaaaataataaactccctataataattagtcaatttaatggaacatttatgatgacttaatcatgaaaccc-attaaacatacgaata 2375125  T
Q  528 ctattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagactgat-------gatcacatc 620  Q
     |||| | |||||||  ||||||| | ||| ||| || ||| |||| |||||||| |||   ||||||| || |||||| ||||       |||||||||    
T  2375126 ttatttttaaagtatatgtagtcacgatttattgcga-gtgagataacattaaagtatatgaactattaagtgggtagattgatcactcatgatcacatc 2375224  T
Q  621 tcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagtaatatttatattggattgatccgccatgagaatactacat 717  Q
     |||  ||||||||||| |||||||| | | |||||||| |||||||||||| ||||||||| ||||||||||||| || |||| | ||| ||||||    
T  2375225 acacgtatcatggataatgagttatcaaattttcacataaatataaatattatgagtaatatgtatattggattgaccctccattataattctacat 2375321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 578 - 717
Target Start/End: Complemental strand, 8371564 - 8371426
Alignment:
Q  578 taaagcatagagactattatgtaggtagactgatgatcacatctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagt 677  Q
    |||||||| |||||||||||||| |||||||||||| | |||||||  | |||| ||||  ||| |||| |||||  |||||| ||||||||||| ||||    
T  8371564 taaagcatcgagactattatgtatgtagactgatgaccgcatctcatgggtcatagatat-gagatatcaagtctatacataggtataaatattaagagt 8371466  T
Q  678 aatatttatattggattgatccgccatgagaatactacat 717  Q
    ||||||||||||||||||| || || ||||||||||||||    
T  8371465 aatatttatattggattgacccaccgtgagaatactacat 8371426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 578 - 717
Target Start/End: Complemental strand, 22130920 - 22130782
Alignment:
Q  578 taaagcatagagactattatgtaggtagactgatgatcacatctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagt 677  Q
    |||||| | |||||||||||||| |||||||||||| | |||||||  | |||| ||||  ||| |||| |||||  |||||||||||||||||||||||    
T  22130920 taaagcgtcgagactattatgtatgtagactgatgaccgcatctcatgggtcatagatat-gagatatcaagtctatacatagatataaatattaggagt 22130822  T
Q  678 aatatttatattggattgatccgccatgagaatactacat 717  Q
    ||||||||||||||||||| || |  ||||||||||||||    
T  22130821 aatatttatattggattgacccactgtgagaatactacat 22130782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 578 - 717
Target Start/End: Original strand, 25611186 - 25611324
Alignment:
Q  578 taaagcatagagactattatgtaggtagactgatgatcacatctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagt 677  Q
    |||||| | |||||||||||||| ||||||||||||   |||||||  | |||| ||||  ||| |||| |||||  |||||||||||||||||||||||    
T  25611186 taaagcgtcgagactattatgtatgtagactgatgactgcatctcatgggtcatagatat-gagatatcaagtctatacatagatataaatattaggagt 25611284  T
Q  678 aatatttatattggattgatccgccatgagaatactacat 717  Q
    ||||||||||||||||||| || || ||||||||||||||    
T  25611285 aatatttatattggattgacccaccgtgagaatactacat 25611324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 578 - 717
Target Start/End: Complemental strand, 27007828 - 27007690
Alignment:
Q  578 taaagcatagagactattatgtaggtagactgatgatcacatctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagt 677  Q
    |||||| | |||||||||||||| |||||||||||| | |||||||  | |||| ||||  ||| |||| |||||  |||||||||||||||||||||||    
T  27007828 taaagcgtcgagactattatgtatgtagactgatgaccgcatctcatgggtcatagatat-gagatatcaagtctatacatagatataaatattaggagt 27007730  T
Q  678 aatatttatattggattgatccgccatgagaatactacat 717  Q
    ||||||||||||||||||| || |  ||||||||||||||    
T  27007729 aatatttatattggattgacccactgtgagaatactacat 27007690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 578 - 717
Target Start/End: Complemental strand, 27014971 - 27014833
Alignment:
Q  578 taaagcatagagactattatgtaggtagactgatgatcacatctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagt 677  Q
    |||||| | |||||||||||||| |||||||||||| | |||||||  | |||| ||||  ||| |||| |||||  |||||||||||||||||||||||    
T  27014971 taaagcgtcgagactattatgtatgtagactgatgaccgcatctcatgggtcatagatat-gagatatcaagtctatacatagatataaatattaggagt 27014873  T
Q  678 aatatttatattggattgatccgccatgagaatactacat 717  Q
    ||||||||||||||||||| || |  ||||||||||||||    
T  27014872 aatatttatattggattgacccactgtgagaatactacat 27014833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 578 - 717
Target Start/End: Complemental strand, 27880798 - 27880660
Alignment:
Q  578 taaagcatagagactattatgtaggtagactgatgatcacatctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagt 677  Q
    |||||| | |||||||||||||| |||||||||||| | |||||||  | |||| ||||  ||| |||| |||||  |||||||||||||||||||||||    
T  27880798 taaagcgtcgagactattatgtatgtagactgatgaccgcatctcatgggtcatagatat-gagatatcaagtctatacatagatataaatattaggagt 27880700  T
Q  678 aatatttatattggattgatccgccatgagaatactacat 717  Q
    ||||||||||||||||||| || |  ||||||||||||||    
T  27880699 aatatttatattggattgacccactgtgagaatactacat 27880660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 578 - 717
Target Start/End: Complemental strand, 28020979 - 28020841
Alignment:
Q  578 taaagcatagagactattatgtaggtagactgatgatcacatctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagt 677  Q
    |||||| | |||||||||||||| |||||||||||| | |||||||  | |||| ||||  ||| |||| |||||  |||||||||||||||||||||||    
T  28020979 taaagcgtcgagactattatgtatgtagactgatgaccgcatctcatgggtcatagatat-gagatatcaagtctatacatagatataaatattaggagt 28020881  T
Q  678 aatatttatattggattgatccgccatgagaatactacat 717  Q
    ||||||||||||||||||| || |  ||||||||||||||    
T  28020880 aatatttatattggattgacccactgtgagaatactacat 28020841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 578 - 717
Target Start/End: Original strand, 21916667 - 21916805
Alignment:
Q  578 taaagcatagagactattatgtaggtagactgatgatcacatctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagt 677  Q
    |||||| | |||||||||||||| |||||||||||| | |||||||  | |||| ||||  ||| |||| |||||   ||||||||||||||||||||||    
T  21916667 taaagcgtcgagactattatgtatgtagactgatgaccgcatctcatgggtcatagatat-gagatatcaagtctatgcatagatataaatattaggagt 21916765  T
Q  678 aatatttatattggattgatccgccatgagaatactacat 717  Q
    ||||||||||||||||||| || |  ||||||||||||||    
T  21916766 aatatttatattggattgacccactgtgagaatactacat 21916805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 578 - 717
Target Start/End: Original strand, 18835341 - 18835479
Alignment:
Q  578 taaagcatagagactattatgtaggtagactgatgatcacatctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagt 677  Q
    |||||||| |||||||||||||| |||||||||| | |||||||||  | |||| ||||  ||| |||  |||||  |||||  ||||||||||||||||    
T  18835341 taaagcatcgagactattatgtatgtagactgattaccacatctcatgggtcatagatat-gagatattaagtctatacataagtataaatattaggagt 18835439  T
Q  678 aatatttatattggattgatccgccatgagaatactacat 717  Q
    |||||||||| |||||||| || || ||||||||||||||    
T  18835440 aatatttatactggattgacccaccgtgagaatactacat 18835479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 582 - 717
Target Start/End: Complemental strand, 24797419 - 24797285
Alignment:
Q  582 gcatagagactattatgtaggtagactgatgatcacatctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagtaata 681  Q
    ||||||||||||||||||  ||| | ||||||  ||||||||  | ||||||||| || | ||||  |||||||| ||| ||||||||||| |||||| |    
T  24797419 gcatagagactattatgtgagtatattgatgactacatctcatgggtcatggatatag-gatatcatgtcttcacgtaggtataaatattatgagtaaaa 24797321  T
Q  682 tttatattggattgatccgccatgagaatactacat 717  Q
    |||||| |||||||| ||||||||||||||||||||    
T  24797320 tttatactggattgacccgccatgagaatactacat 24797285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 578 - 717
Target Start/End: Complemental strand, 45534584 - 45534446
Alignment:
Q  578 taaagcatagagactattatgtaggtagactgatgatcacatctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagt 677  Q
    |||||| | |||||||||||||| |||||||||||| | |||||||  | |||| ||||  ||| |||  |||||  ||||||||||||||||||| |||    
T  45534584 taaagcgtcgagactattatgtatgtagactgatgaccgcatctcatgggtcatagatat-gagatattaagtctatacatagatataaatattagaagt 45534486  T
Q  678 aatatttatattggattgatccgccatgagaatactacat 717  Q
    ||||||||||||||||||| || |  ||||||||||||||    
T  45534485 aatatttatattggattgacccactgtgagaatactacat 45534446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 313 - 371
Target Start/End: Original strand, 21940571 - 21940629
Alignment:
Q  313 actgttgggataagccctaatagccaatctatattgattgggtttggctttgtatcatg 371  Q
    |||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||    
T  21940571 actgttggaataagccctaatagccaatctatattgattggttttggctttgtatcatg 21940629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 315 - 371
Target Start/End: Original strand, 22070108 - 22070164
Alignment:
Q  315 tgttgggataagccctaatagccaatctatattgattgggtttggctttgtatcatg 371  Q
    |||||| |||||||||||||||||||||||||||||||||||||| |||||||||||    
T  22070108 tgttggaataagccctaatagccaatctatattgattgggtttggttttgtatcatg 22070164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 578 - 717
Target Start/End: Original strand, 26240475 - 26240613
Alignment:
Q  578 taaagcatagagactattatgtaggtagactgatgatcacatctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagt 677  Q
    |||||| | |||||||||||||| | |||||||||| | |||||||  | |||| ||||  ||| |||  ||| |  |||||| ||||||||||||||||    
T  26240475 taaagcgtcgagactattatgtatgaagactgatgaccgcatctcatgggtcatagatat-gagatattaagtatatacataggtataaatattaggagt 26240573  T
Q  678 aatatttatattggattgatccgccatgagaatactacat 717  Q
    ||||||||||||||||||| || || ||||||||||||||    
T  26240574 aatatttatattggattgacccaccgtgagaatactacat 26240613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 314 - 371
Target Start/End: Original strand, 6094030 - 6094087
Alignment:
Q  314 ctgttgggataagccctaatagccaatctatattgattgggtttggctttgtatcatg 371  Q
    |||||||  |||||||||||||||||||||||||||||| ||||||||||||||||||    
T  6094030 ctgttggagtaagccctaatagccaatctatattgattgagtttggctttgtatcatg 6094087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 315 - 371
Target Start/End: Original strand, 22171396 - 22171452
Alignment:
Q  315 tgttgggataagccctaatagccaatctatattgattgggtttggctttgtatcatg 371  Q
    |||||| |||||||||||||||||||||||||||||||||||||  |||||||||||    
T  22171396 tgttggaataagccctaatagccaatctatattgattgggtttgattttgtatcatg 22171452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 323 - 367
Target Start/End: Original strand, 24642564 - 24642608
Alignment:
Q  323 taagccctaatagccaatctatattgattgggtttggctttgtat 367  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  24642564 taagccctaatagccaatctatattgattgggtttggctttgtat 24642608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 588 - 717
Target Start/End: Complemental strand, 22659795 - 22659667
Alignment:
Q  588 agactattatgtaggtagactgatgatcacatctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagtaatatttata 687  Q
    ||||||||||||| ||||||||||||   |||||||  | |||| ||||  ||| |||  |||||  |||||| ||||||||||||||||||||| ||||    
T  22659795 agactattatgtatgtagactgatgactgcatctcatgggtcatagatat-gagatattaagtctatacataggtataaatattaggagtaatatgtata 22659697  T
Q  688 ttggattgatccgccatgagaatactacat 717  Q
     |||||||| || || ||||||||||||||    
T  22659696 ctggattgacccaccgtgagaatactacat 22659667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 323 - 371
Target Start/End: Original strand, 28554799 - 28554847
Alignment:
Q  323 taagccctaatagccaatctatattgattgggtttggctttgtatcatg 371  Q
    |||||||||||||||||||| | ||||||||||||||||||||||||||    
T  28554799 taagccctaatagccaatctttgttgattgggtttggctttgtatcatg 28554847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 590 - 684
Target Start/End: Original strand, 29645537 - 29645631
Alignment:
Q  590 actattatgtaggtagactgatgatcacatctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagtaatattt 684  Q
    ||||||| || |||| |||||||| |||||||||  | ||||| ||||||| ||||| | |||||||||| ||||||| |||| |||||||||||    
T  29645537 actattacgtgggtaaactgatgaccacatctcatggttcatgcataaagatttatcaactcttcacatatatataaacattaagagtaatattt 29645631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 445 - 508
Target Start/End: Original strand, 10920234 - 10920297
Alignment:
Q  445 taataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 508  Q
    ||||||| | ||||||||| |||||| ||||||||||||||||||||| | ||||| |||||||    
T  10920234 taataaaattcctagaataattagtctgtttaatggaacattaagtatgagttaatcgtgagac 10920297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 655 - 717
Target Start/End: Original strand, 6430953 - 6431015
Alignment:
Q  655 acatagatataaatattaggagtaatatttatattggattgatccgccatgagaatactacat 717  Q
    |||||| |||||||||||||||||||||||||| | ||| || || || ||||||||||||||    
T  6430953 acataggtataaatattaggagtaatatttatactagatagacccaccgtgagaatactacat 6431015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 663 - 717
Target Start/End: Complemental strand, 8782102 - 8782048
Alignment:
Q  663 ataaatattaggagtaatatttatattggattgatccgccatgagaatactacat 717  Q
    ||||||||||||| ||||||||||| | ||||||||| || ||||||||||||||    
T  8782102 ataaatattaggactaatatttatacttgattgatccaccgtgagaatactacat 8782048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 655 - 694
Target Start/End: Original strand, 36970332 - 36970371
Alignment:
Q  655 acatagatataaatattaggagtaatatttatattggatt 694  Q
    |||||| |||||||||||||||||||||||||| ||||||    
T  36970332 acataggtataaatattaggagtaatatttatactggatt 36970371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 655 - 693
Target Start/End: Complemental strand, 2963171 - 2963133
Alignment:
Q  655 acatagatataaatattaggagtaatatttatattggat 693  Q
    |||||| |||||||||||||||||||||||||| |||||    
T  2963171 acataggtataaatattaggagtaatatttatactggat 2963133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 563 - 661
Target Start/End: Original strand, 24535471 - 24535569
Alignment:
Q  563 gaagtgggatatcattaaagcatagagactattatgtaggtagactgatgatcacatctcacagatcatggataaagagttatccagtcttcacataga 661  Q
    |||||| |||| |||| || ||| |||| |||| |||  ||| ||||||||||| |||| || ||||||| |||| |||||||| ||| ||||||||||    
T  24535471 gaagtgagataacattgaaacatcgagattattttgtgagtacactgatgatcatatcttacggatcatgaataatgagttatcaagttttcacataga 24535569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 661 - 714
Target Start/End: Original strand, 34659059 - 34659112
Alignment:
Q  661 atataaatattaggagtaatatttatattggattgatccgccatgagaatacta 714  Q
    ||||| ||||||||| |||||||||||||||||| |||| |||||  |||||||    
T  34659059 atatatatattaggactaatatttatattggatttatccaccatgcaaatacta 34659112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 291; Significance: 1e-163; HSPs: 28)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 291; E-Value: 1e-163
Query Start/End: Original strand, 407 - 717
Target Start/End: Complemental strand, 21330455 - 21330145
Alignment:
Q  407 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 506  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21330455 acaagacatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 21330356  T
Q  507 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 606  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||    
T  21330355 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtgga 21330256  T
Q  607 ctgatgatcacatctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagtaatatttatattggattgatccgccatga 706  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  21330255 ctgatgatcacatctcacagatcatggataaagagttatcaagtcttcacatagatataaatattatgagtaatatttatattggattgatccgccatga 21330156  T
Q  707 gaatactacat 717  Q
    |||||||||||    
T  21330155 gaatactacat 21330145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 407 - 717
Target Start/End: Original strand, 18796506 - 18796816
Alignment:
Q  407 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 506  Q
    |||||| |||| ||| || |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18796506 acaaggaatttatttgtttattttgttttgtttcaaaataacaaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 18796605  T
Q  507 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 606  Q
    ||| | || |||||||||| | |||||| ||| |||| ||||||||||||| ||| ||||||| ||||||||||||||| ||||||||||||| ||||||    
T  18796606 acctcttttaacataaggatattattcttaaattatctgtagtcaagctttattgtgaagtggtatatcattaaagcattgagactattatgtgggtaga 18796705  T
Q  607 ctgatgatcacatctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagtaatatttatattggattgatccgccatga 706  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||    
T  18796706 ctgatgatcacatctcacagatcatggataaagagttatcaagtcttcacatagatataaatattaggagtaatatttatattggattgatcctctatga 18796805  T
Q  707 gaatactacat 717  Q
    |||||||||||    
T  18796806 gaatactacat 18796816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 161; E-Value: 2e-85
Query Start/End: Original strand, 409 - 717
Target Start/End: Original strand, 18619807 - 18620114
Alignment:
Q  409 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 508  Q
    |||| |||||||| |||||||||||||||||||||||||||||||||||| |||| |||||| |||||||||| |||||||| | |||||||| ||||||    
T  18619807 aaggaatttctttgttgattttgttttgtttcaaaataataaagtccctataataattagtctgtttaatggagcattaagtgtgacttaattatgagac 18619906  T
Q  509 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagact 608  Q
    || |||||||| ||||| | |||||| |||||||| || ||||| |||| ||| |||  ||||||  ||||||||||| |||||||||||| ||||| |     
T  18619907 cc-attaaacaaaaggatattattcttaaagtatctgtggtcaaactttattgtgaaaagggataatattaaagcatatagactattatgtgggtaggcc 18620005  T
Q  609 gatgatcacatctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagtaatatttatattggattgatccgccatgaga 708  Q
    |||||||||||||||| |||||| ||||||||||||||  |||||||||||| |||||||||||||||||||||||||| | |||||| || ||||||||    
T  18620006 gatgatcacatctcacggatcatagataaagagttatcatgtcttcacataggtataaatattaggagtaatatttatactagattgacccaccatgaga 18620105  T
Q  709 atactacat 717  Q
    |||||||||    
T  18620106 atactacat 18620114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 441 - 710
Target Start/End: Original strand, 36270199 - 36270469
Alignment:
Q  441 aaaataataaagtccctagaatagttagtccgtttaa-tggaacattaagtataacttaattgtgagaccccattaaacataaggaaactattctcaaag 539  Q
    |||||||||||||||||||||||||||||    |||| || ||  |||||| | ||||||| |||||||  ||||||||| || || |||||||| |||     
T  36270199 aaaataataaagtccctagaatagttagtttacttaaatgaaatgttaagtgtgacttaatcgtgagacatcattaaacacaatgacactattcttaaaa 36270298  T
Q  540 tatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgatcacatctcacagatcatggataaag 639  Q
     ||||||| |||||||||  || |||| |||||| |||||||| ||| |||||||| ||| ||||||||||||||||||||||||   |||| || ||||    
T  36270299 catccgtaatcaagctttagtgtgaagagggataacattaaagtataaagactattgtgtgggtagactgatgatcacatctcacgagtcatagagaaag 36270398  T
Q  640 agttatccagtcttcacatagatataaatattaggagtaatatttatattggattgatccgccatgagaat 710  Q
    ||||||| ||| ||||| | ||| |||||||||||||||||||||||||||||||||  ||||||||||||    
T  36270399 agttatcaagttttcacttcgatttaaatattaggagtaatatttatattggattgactcgccatgagaat 36270469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 98; E-Value: 7e-48
Query Start/End: Original strand, 441 - 708
Target Start/End: Original strand, 18822115 - 18822384
Alignment:
Q  441 aaaataataaagtccctagaatagttagtccgtttaa-tggaaca-ttaagtataacttaattgtgagaccccattaaacataaggaaactattctcaaa 538  Q
    ||||||||||||||  |||||| |||||| ||||||| ||||| | |||||| |  |||||| ||||||| |||||||||| ||||| |||||||| |||    
T  18822115 aaaataataaagtctatagaattgttagttcgtttaaatggaaaaattaagtgtggcttaatcgtgagacaccattaaacacaaggacactattcttaaa 18822214  T
Q  539 gtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgatcacatctcacagatcatggataaa 638  Q
      ||  ||| |||||||||  |  |||||||||||||||||||||| | ||| ||||||||   ||||||||||||||||| |||| |||||| |||||     
T  18822215 acatatgtaatcaagctttagtttgaagtgggatatcattaaagcagatagattattatgtcaatagactgatgatcacatatcacggatcattgataag 18822314  T
Q  639 gagttatccagtcttcacatagatataaatattaggagtaatatttatattggattgatccgccatgaga 708  Q
    |||||||| | | |||||||||||||||||||||   ||||||||||||||||||||||| |||||||||    
T  18822315 gagttatcaacttttcacatagatataaatattaatggtaatatttatattggattgatctgccatgaga 18822384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 472 - 710
Target Start/End: Original strand, 20977957 - 20978178
Alignment:
Q  472 gtttaatggaacattaagtataacttaattgtgagaccccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtggga 571  Q
    |||||||||||||||||| |||| |||||  ||||| ||||||||| ||||||||| |||||| |||  |||||||||||||||||  || |||||| ||    
T  20977957 gtttaatggaacattaagaataatttaatcatgagatcccattaaaaataaggaaattattcttaaaacatccgtagtcaagctttaatgtgaagtgaga 20978056  T
Q  572 tatcattaaagcatagagactattatgtaggtagactgatgatcacatctcacagatcatggataaagagttatccagtcttcacatagatataaatatt 671  Q
    ||||| |||||||||||||||||||||| | |||                 |||||||||||||||||||||||| |||||||||  |||||||| ||||    
T  20978057 tatcactaaagcatagagactattatgtggatag-----------------acagatcatggataaagagttatcaagtcttcaccgagatataattatt 20978139  T
Q  672 aggagtaatatttatattggattgatccgccatgagaat 710  Q
    | ||||||||||||||||||||||| |||||||||||||    
T  20978140 atgagtaatatttatattggattgacccgccatgagaat 20978178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 569 - 706
Target Start/End: Complemental strand, 22183528 - 22183392
Alignment:
Q  569 ggatatcattaaagcatagagactattatgtaggtagactgatgatcacatctcacagatcatggataaagagttatccagtcttcacatagatataaat 668  Q
    ||||| |||||||| ||||||||||||| || |||||| ||||||||| |||||||||||| | ||||| |||||||| |||||||||||||||||||||    
T  22183528 ggataacattaaagtatagagactattacgtgggtagattgatgatcaaatctcacagatctttgataaggagttatcaagtcttcacatagatataaat 22183429  T
Q  669 attaggagtaatatttatattggattgatccgccatga 706  Q
    |||| |||||||| |||||||||||||| |||||||||    
T  22183428 attaagagtaata-ttatattggattgacccgccatga 22183392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 413 - 552
Target Start/End: Complemental strand, 19692737 - 19692598
Alignment:
Q  413 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacccca 512  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||| |||||| ||||||||||||||||||  | |||||||  ||||| | ||    
T  19692737 catttctttattgattttgttttgtttcaaaataatgaagtccctagaataattagtctgtttaatggaacattaagcctgacttaatcatgagatctca 19692638  T
Q  513 ttaaacataaggaaactattctcaaagtatccgtagtcaa 552  Q
    ||||||  ||||||| |||||| ||||||||| |||||||    
T  19692637 ttaaactaaaggaaattattcttaaagtatccttagtcaa 19692598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 527 - 717
Target Start/End: Complemental strand, 18852146 - 18851956
Alignment:
Q  527 actattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgatcacatctcacag 626  Q
    |||||||| |||||||  |||||| | |||| ||| ||||| ||||| |||||||   || |||||||||||| |||||||| |||||| |||||||| |    
T  18852146 actattcttaaagtatatgtagtccaactttattgtgaagtaggataacattaaattgtatagactattatgtcggtagactaatgatcccatctcacgg 18852047  T
Q  627 atcatggataaagagttatccagtcttcacatagatataaatattaggagtaatatttatattggattgatccgccatgagaatactacat 717  Q
    |||||| ||||||||||||| |||||||| |||  ||||||||||| |||||||||||||||||||||||  ||| || |||||| |||||    
T  18852046 atcatgaataaagagttatcaagtcttcaaatatgtataaatattaagagtaatatttatattggattgactcgctataagaatattacat 18851956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 564 - 717
Target Start/End: Original strand, 19279445 - 19279598
Alignment:
Q  564 aagtgggatatcattaaagcatagagactattatgtaggtagactgatgatcacatctcacagatcatggataaagagttatccagtcttcacatagata 663  Q
    |||||||||| | |||||||||| |||||||||||   || |||| |||||||||||||||  |||||||||||| ||||||| ||| |||| |||||||    
T  19279445 aagtgggataactttaaagcataaagactattatgcgagttgactaatgatcacatctcacgtatcatggataaaaagttatcaagttttcagatagata 19279544  T
Q  664 taaatattaggagtaatatttatattggattgatccgccatgagaatactacat 717  Q
    || ||||| ||||||||||||||||||||||||  || ||||||||||| ||||    
T  19279545 tagatatttggagtaatatttatattggattgacacgtcatgagaataccacat 19279598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 578 - 717
Target Start/End: Complemental strand, 24250343 - 24250205
Alignment:
Q  578 taaagcatagagactattatgtaggtagactgatgatcacatctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagt 677  Q
    |||||| | |||||||||||||| |||||||||||| | |||||||  | |||| ||||  ||| |||| |||||  |||||||||||||||||||||||    
T  24250343 taaagcgtcgagactattatgtatgtagactgatgaccgcatctcatgggtcatagatat-gagatatcaagtctatacatagatataaatattaggagt 24250245  T
Q  678 aatatttatattggattgatccgccatgagaatactacat 717  Q
    ||||||||||||||||||| || |  ||||||||||||||    
T  24250244 aatatttatattggattgacccactgtgagaatactacat 24250205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 578 - 717
Target Start/End: Original strand, 30174368 - 30174506
Alignment:
Q  578 taaagcatagagactattatgtaggtagactgatgatcacatctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagt 677  Q
    |||||| | |||||||||||||| |||||||||||| | |||||||  | |||| ||||  ||| |||| |||||  |||||||||||||||||||||||    
T  30174368 taaagcgtcgagactattatgtatgtagactgatgaccgcatctcatgggtcatagatat-gagatatcaagtctatacatagatataaatattaggagt 30174466  T
Q  678 aatatttatattggattgatccgccatgagaatactacat 717  Q
    ||||||||||||||||||| || |  ||||||||||||||    
T  30174467 aatatttatattggattgacccactgtgagaatactacat 30174506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 582 - 709
Target Start/End: Complemental strand, 6992146 - 6992017
Alignment:
Q  582 gcatagagactattatgtaggtagactgatgatcacatctcacagatcatggataaagagttatccagt--cttcacatagatataaatattaggagtaa 679  Q
    ||||| ||| |||||| | |||||||| ||||||| ||||||||||| ||  ||||||| ||||| |||  |||||||||| ||||||| | ||||||||    
T  6992146 gcataaagattattatatgggtagactaatgatcatatctcacagattataaataaagatttatcaagtatcttcacataggtataaatctcaggagtaa 6992047  T
Q  680 tatttatattggattgatccgccatgagaa 709  Q
    |||||||||||||||||||| |||| ||||    
T  6992046 tatttatattggattgatcctccataagaa 6992017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 315 - 371
Target Start/End: Complemental strand, 21330549 - 21330493
Alignment:
Q  315 tgttgggataagccctaatagccaatctatattgattgggtttggctttgtatcatg 371  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21330549 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 21330493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 578 - 717
Target Start/End: Complemental strand, 24229526 - 24229388
Alignment:
Q  578 taaagcatagagactattatgtaggtagactgatgatcacatctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagt 677  Q
    |||||| | |||||||||||||| |||||||||||| | |||||||  | |||| ||||  ||| |||  |||||  |||||| ||||||||||||||||    
T  24229526 taaagcgtcgagactattatgtatgtagactgatgaccgcatctcatggttcatagatat-gagatattaagtctatacataggtataaatattaggagt 24229428  T
Q  678 aatatttatattggattgatccgccatgagaatactacat 717  Q
    |||||||||| |||||||| || || ||||||||||||||    
T  24229427 aatatttatactggattgacccaccgtgagaatactacat 24229388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 593 - 696
Target Start/End: Complemental strand, 36802003 - 36801899
Alignment:
Q  593 attatgtaggtagactgatgatcacatctcacagatcatggataaagagttatccagtcttcacat-agatataaatattaggagtaatatttatattgg 691  Q
    |||||||  ||||||||||||||||| |||||| ||||| ||||| |||||||| ||||||| ||| | |||||||||||| | |||||||||||||||     
T  36802003 attatgtgagtagactgatgatcacacctcacaaatcattgataatgagttatcaagtcttcgcataaaatataaatattaagggtaatatttatattga 36801904  T
Q  692 attga 696  Q
    |||||    
T  36801903 attga 36801899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 662 - 717
Target Start/End: Original strand, 29800545 - 29800600
Alignment:
Q  662 tataaatattaggagtaatatttatattggattgatccgccatgagaatactacat 717  Q
    |||||||||||||||||||||||||| |||||||| || || ||||||||||||||    
T  29800545 tataaatattaggagtaatatttatactggattgacccaccgtgagaatactacat 29800600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 209 - 311
Target Start/End: Original strand, 11536142 - 11536242
Alignment:
Q  209 actgaatcaatatagatagagttgcgctgagactaaatttcaataactattcctcatatgtttcctcttaatcgattgtatatactttttatgcctcaga 308  Q
    ||||||| |||||| ||||||||  | || || |||||||||||||||| ||||||| |  |||||||||||| ||||  ||||||||| |||||||| |    
T  11536142 actgaataaatataaatagagttatgttgggattaaatttcaataactactcctcatgtaattcctcttaatcaattg--tatacttttcatgcctcata 11536239  T
Q  309 tac 311  Q
    |||    
T  11536240 tac 11536242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 244 - 310
Target Start/End: Original strand, 14291229 - 14291293
Alignment:
Q  244 aatttcaataactattcctcatatgtttcctcttaatcgattgtatatactttttatgcctcagata 310  Q
    ||||||| |||||||||||| |||||||||| |||||||||||  |||||||||||| | |||||||    
T  14291229 aatttcagtaactattcctcgtatgtttccttttaatcgattg--tatactttttatacttcagata 14291293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 589 - 696
Target Start/End: Complemental strand, 28741326 - 28741220
Alignment:
Q  589 gactattatgtaggtagactgatgatcacatctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagtaatatttatat 688  Q
    |||||||||||| ||||||||||||||||||||||    ||||| || | ||| |||  ||| |  |||||| ||||||||||||||||||||||||||     
T  28741326 gactattatgtatgtagactgatgatcacatctcatgcgtcatgaat-atgagatattaagtatgtacataggtataaatattaggagtaatatttatac 28741228  T
Q  689 tggattga 696  Q
     |||||||    
T  28741227 cggattga 28741220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 655 - 717
Target Start/End: Complemental strand, 15342237 - 15342175
Alignment:
Q  655 acatagatataaatattaggagtaatatttatattggattgatccgccatgagaatactacat 717  Q
    |||||| |||||||||||||||||||||||||| |||||| | || || ||| ||||||||||    
T  15342237 acataggtataaatattaggagtaatatttatactggattaacccaccgtgaaaatactacat 15342175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 578 - 623
Target Start/End: Complemental strand, 12098654 - 12098609
Alignment:
Q  578 taaagcatagagactattatgtaggtagactgatgatcacatctca 623  Q
    |||| |||||||||||||||||| ||||||||||||||| ||||||    
T  12098654 taaaacatagagactattatgtatgtagactgatgatcagatctca 12098609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 245 - 315
Target Start/End: Complemental strand, 27905621 - 27905553
Alignment:
Q  245 atttcaataactattcctcatatgtttcctcttaatcgattgtatatactttttatgcctcagatacaact 315  Q
    ||||||||||| |||||||| ||||||||||||||| |||||   | ||||||||||| ||||||| ||||    
T  27905621 atttcaataaccattcctcacatgtttcctcttaattgattg--aacactttttatgcttcagatataact 27905553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 662 - 716
Target Start/End: Original strand, 21626824 - 21626877
Alignment:
Q  662 tataaatattaggagtaatatttatattggattgatccgccatgagaatactaca 716  Q
    |||||||| || ||||||||||||||||| ||||| || ||||||||||||||||    
T  21626824 tataaataatatgagtaatatttatattgaattga-ccaccatgagaatactaca 21626877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 578 - 696
Target Start/End: Complemental strand, 24763868 - 24763751
Alignment:
Q  578 taaagcatagagactattatgtaggtagactgatgatcacatctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagt 677  Q
    |||||||| ||||||||||| || |||||||||||| ||| |||||  | |||| || |  ||| |||   ||||  |||||| ||||||||||| ||||    
T  24763868 taaagcatcgagactattatttatgtagactgatgaccacgtctcatgggtcatagacat-gagatattacgtctatacataggtataaatattatgagt 24763770  T
Q  678 aatatttatattggattga 696  Q
    |||||||||| ||||||||    
T  24763769 aatatttatactggattga 24763751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 658 - 696
Target Start/End: Complemental strand, 28719006 - 28718968
Alignment:
Q  658 tagatataaatattaggagtaatatttatattggattga 696  Q
    |||||||||||||||||||||||||||||| | ||||||    
T  28719006 tagatataaatattaggagtaatatttatacttgattga 28718968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 244 - 290
Target Start/End: Original strand, 32067103 - 32067149
Alignment:
Q  244 aatttcaataactattcctcatatgtttcctcttaatcgattgtata 290  Q
    |||||||||||| ||| |||||||||||| ||||||| |||||||||    
T  32067103 aatttcaataacgattactcatatgtttcatcttaattgattgtata 32067149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 266 - 310
Target Start/End: Complemental strand, 22116935 - 22116893
Alignment:
Q  266 atgtttcctcttaatcgattgtatatactttttatgcctcagata 310  Q
    |||||||||||||||||||||  |||||||||||||| |||||||    
T  22116935 atgtttcctcttaatcgattg--tatactttttatgcttcagata 22116893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0433 (Bit Score: 287; Significance: 1e-160; HSPs: 2)
Name: scaffold0433
Description:

Target: scaffold0433; HSP #1
Raw Score: 287; E-Value: 1e-160
Query Start/End: Original strand, 407 - 717
Target Start/End: Original strand, 7107 - 7417
Alignment:
Q  407 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 506  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  7107 acaaggtatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatagaacattaagtataacttaattgtgag 7206  T
Q  507 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 606  Q
    |||||||||||||||| ||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  7207 accccattaaacataatgaaactattctaaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 7306  T
Q  607 ctgatgatcacatctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagtaatatttatattggattgatccgccatga 706  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7307 ctgatgatcacatctcacagatcatggataaagagttatcaagtcttcacatagatataaatattaggagtaatatttatattggattgatccgccatga 7406  T
Q  707 gaatactacat 717  Q
    |||||||||||    
T  7407 gaatactacat 7417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0433; HSP #2
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 315 - 371
Target Start/End: Original strand, 7015 - 7071
Alignment:
Q  315 tgttgggataagccctaatagccaatctatattgattgggtttggctttgtatcatg 371  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  7015 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 7071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 287; Significance: 1e-160; HSPs: 41)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 287; E-Value: 1e-160
Query Start/End: Original strand, 407 - 717
Target Start/End: Complemental strand, 24695673 - 24695363
Alignment:
Q  407 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 506  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24695673 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 24695574  T
Q  507 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 606  Q
    |||||||||||||||| ||||||||||| |||||||||||||||||||||| |||||||||| ||||||| |||||||||||||||||||||||||||||    
T  24695573 accccattaaacataatgaaactattctaaaagtatccgtagtcaagctttattgagaagtgagatatcaataaagcatagagactattatgtaggtaga 24695474  T
Q  607 ctgatgatcacatctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagtaatatttatattggattgatccgccatga 706  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24695473 ctgatgatcacatctcacagatcatggataaagagttatcaagtcttcacatagatataaatattaggagtaatatttatattggattgatccgccatga 24695374  T
Q  707 gaatactacat 717  Q
    |||||||||||    
T  24695373 gaatactacat 24695363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 265; E-Value: 1e-147
Query Start/End: Original strand, 409 - 717
Target Start/End: Complemental strand, 19714703 - 19714395
Alignment:
Q  409 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 508  Q
    ||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19714703 aaggcatttctttattgattttgttttatttcaaagtaataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 19714604  T
Q  509 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagact 608  Q
    ||| |||||||||||||| ||||||| ||| |||||| ||||||||||| ||||||||| ||||||||||||||||||||||||||||||| ||||||||    
T  19714603 cccgttaaacataaggaatctattcttaaaatatccgaagtcaagctttattgagaagtaggatatcattaaagcatagagactattatgtgggtagact 19714504  T
Q  609 gatgatcacatctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagtaatatttatattggattgatccgccatgaga 708  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19714503 gatgatcacatctcacagatcatggataaagagttatcaagtcttcacatagatataaatattaggagtaatatttatattggattgatccgccatgaga 19714404  T
Q  709 atactacat 717  Q
    |||||||||    
T  19714403 atactacat 19714395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 250; E-Value: 1e-138
Query Start/End: Original strand, 407 - 717
Target Start/End: Complemental strand, 18570070 - 18569758
Alignment:
Q  407 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 506  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  18570070 acaagacatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaattgaacattaagtataacttaattgtgag 18569971  T
Q  507 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 606  Q
    ||||| |||||||||||||||||| ||| |||||||||||||||||||||| ||||||||||| |||||||||||||||| |||||||||||| ||||||    
T  18569970 accccgttaaacataaggaaactactcttaaagtatccgtagtcaagctttattgagaagtggaatatcattaaagcataaagactattatgttggtaga 18569871  T
Q  607 ctgatgatcacatctcacagatcatgg--ataaagagttatccagtcttcacatagatataaatattaggagtaatatttatattggattgatccgccat 704  Q
    ||||||||||||||||||| |||||||  |||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  18569870 ctgatgatcacatctcacatatcatggatataaagagatatcaagtcttcacatagatataaatattaggagtaatatttatattggattgacccgccat 18569771  T
Q  705 gagaatactacat 717  Q
    |||||||||||||    
T  18569770 gagaatactacat 18569758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 249; E-Value: 1e-138
Query Start/End: Original strand, 413 - 717
Target Start/End: Complemental strand, 19707419 - 19707115
Alignment:
Q  413 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacccca 512  Q
    ||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||     
T  19707419 catttctttattgattttgttttatttcaaagtaataaagtccctagaatagttagtcagtttaatggaacattaagtataacttaattgtgagaccccg 19707320  T
Q  513 ttaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatg 612  Q
    |||||||||||||| ||||||| ||| |||||| ||||||||||| ||||||||| ||||||||||||||||||||||||||||||| ||||||||||||    
T  19707319 ttaaacataaggaatctattcttaaaatatccgaagtcaagctttattgagaagtaggatatcattaaagcatagagactattatgtgggtagactgatg 19707220  T
Q  613 atcacatctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagtaatatttatattggattgatccgccatgagaatac 712  Q
    |||||||||||||||||||||||||||||||||| | |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  19707219 atcacatctcacagatcatggataaagagttatcaaatcttcacatagatataaatactaggagtaatatttatattggattgatccgccatgagaatac 19707120  T
Q  713 tacat 717  Q
    |||||    
T  19707119 tacat 19707115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 157; E-Value: 4e-83
Query Start/End: Original strand, 413 - 717
Target Start/End: Complemental strand, 22547217 - 22546913
Alignment:
Q  413 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacccca 512  Q
    ||||| |||||| |||||||||| ||| |||||||||||  | ||| ||||||||||| ||||||||||||||||||||||||||||| |||||| | ||    
T  22547217 catttatttattcattttgttttattttaaaataataaaaccgctataatagttagtcggtttaatggaacattaagtataacttaatcgtgagatctca 22547118  T
Q  513 ttaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatg 612  Q
    ||||| ||| ||| | |||| | ||||||| || |||||| |||| ||| |||||| |||| |||||||  |||||||||||||||| | ||||| ||||    
T  22547117 ttaaatatatggacattatttttaaagtattcgcagtcaaactttattgtgaagtgagataacattaaaatatagagactattatgtggatagaccgatg 22547018  T
Q  613 atcacatctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagtaatatttatattggattgatccgccatgagaatac 712  Q
    ||||||||||||| |||||||||||||||||||| ||| |||| |||||||||||||||| ||||||||||||||||||||||| | |||||||||||||    
T  22547017 atcacatctcacaaatcatggataaagagttatcaagttttcatatagatataaatattatgagtaatatttatattggattgaccagccatgagaatac 22546918  T
Q  713 tacat 717  Q
    |||||    
T  22546917 tacat 22546913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 130; E-Value: 6e-67
Query Start/End: Original strand, 520 - 717
Target Start/End: Original strand, 39538701 - 39538898
Alignment:
Q  520 taaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgatcacat 619  Q
    |||||| |||||||| ||| ||||| |||| ||||||| ||| |||||||||||||||||||||||  |||||||||||| |||||||||||| ||| ||    
T  39538701 taaggacactattcttaaaatatccatagttaagctttattgtgaagtgggatatcattaaagcatgaagactattatgtgggtagactgatggtcatat 39538800  T
Q  620 ctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagtaatatttatattggattgatccgccatgagaatactacat 717  Q
     |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| || |||||| ||||||||||    
T  39538801 ttcacagatcatggataaagagttatcaagtcttcacatagatataaatattaggagtaatatttatattggattgacccaccatgaaaatactacat 39538898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 412 - 667
Target Start/End: Complemental strand, 27347679 - 27347425
Alignment:
Q  412 gcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacccc 511  Q
    |||||||||| |||||||||||||| |||||||||||||||||| ||||||| ||| || |||||||||| |||||||| | ||||||| |||||||||     
T  27347679 gcatttctttgttgattttgttttgattcaaaataataaagtccttagaataattaatctgtttaatggagcattaagtgtgacttaatcgtgagaccc- 27347581  T
Q  512 attaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagactgat 611  Q
    |||||||  ||||| | |||||| |||||||  ||||||||||||| ||| |||  |||||| ||||||||||||||||||||| ||| | ||| | |||    
T  27347580 attaaacgaaaggacattattcttaaagtatatgtagtcaagctttattgtgaaaagggataacattaaagcatagagactattttgtggataggccgat 27347481  T
Q  612 gatcacatctcacagatcatggataaagagttatccagtcttcacatagatataaa 667  Q
    |||||||||||||||||||| ||||||||||||||  |||||||||||| ||||||    
T  27347480 gatcacatctcacagatcatagataaagagttatcatgtcttcacataggtataaa 27347425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 123; E-Value: 8e-63
Query Start/End: Original strand, 473 - 710
Target Start/End: Complemental strand, 18807175 - 18806938
Alignment:
Q  473 tttaatggaacattaagtataacttaattgtgagaccccattaaacataa-ggaaactattctcaaagtatccgtagtcaagctttgttgagaagtggga 571  Q
    |||||||||||||||||| | ||||||| ||||||| |||||||| |||| ||| | |||||| ||||||||  ||||||||| || ||| |||||  ||    
T  18807175 tttaatggaacattaagtgtgacttaatcgtgagacaccattaaa-ataatggacattattcttaaagtatctatagtcaagcgttattgtgaagtaaga 18807077  T
Q  572 tatcattaaagcatagagactattatgtaggtagactgatgatcacatctcacagatcatggataaagagttatccagtcttcacatagatataaatatt 671  Q
    || || |||||||||||||||||||||  ||||||||||||||||||| ||| | |||||||||||||||||||| ||||||||||||||||||||||||    
T  18807076 taacaataaagcatagagactattatgcgggtagactgatgatcacatttcatatatcatggataaagagttatcaagtcttcacatagatataaatatt 18806977  T
Q  672 aggagtaatatttatattggattgatccgccatgagaat 710  Q
    || |||||| |||||||||||||||||| ||||||||||    
T  18806976 agaagtaatgtttatattggattgatccaccatgagaat 18806938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 110; E-Value: 5e-55
Query Start/End: Original strand, 411 - 717
Target Start/End: Complemental strand, 17285935 - 17285645
Alignment:
Q  411 ggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccc 510  Q
    ||||||| ||||||||||||||| ||||||||||||||||  |||  ||||||||||||| ||||||||||||||||||| | ||||||| |||| ||||    
T  17285935 ggcatttatttattgattttgttatgtttcaaaataataatctccagagaatagttagtctgtttaatggaacattaagtgtgacttaatcgtgaaaccc 17285836  T
Q  511 cattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagactga 610  Q
     | |||||  || || | |||||| ||||||| | ||||| | |||| ||| ||| |||||||  |||||||||||                ||||||||    
T  17285835 tagtaaactaaatgacattattcttaaagtattcatagtcgatctttattgtgaattgggatagtattaaagcata----------------tagactga 17285752  T
Q  611 tgatcacatctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagtaatatttatattggattgatccgccatgagaat 710  Q
    ||||||||| |||||| ||||||||||||||||||| |||||| |||||||||||||||||| ||||||||||||||||||||||| || | ||||||||    
T  17285751 tgatcacatatcacaggtcatggataaagagttatcaagtctttacatagatataaatattaagagtaatatttatattggattgacccacaatgagaat 17285652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 411 - 715
Target Start/End: Complemental strand, 17299088 - 17298798
Alignment:
Q  411 ggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccc 510  Q
    ||||||| ||||||||||||||| |||||  |||||||||  |||  ||||||||||||||| |||||||||||||||||   ||||||| |||| ||||    
T  17299088 ggcatttatttattgattttgttatgtttataaataataatatccagagaatagttagtccgattaatggaacattaagtgcgacttaatcgtgaaaccc 17298989  T
Q  511 cattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagactga 610  Q
     | |||||  || || | |||||| ||||||| | ||||| | |||| |||  ||||||||||  |||||||||||                ||||||||    
T  17298988 tagtaaactaaatgacattattcttaaagtattcatagtcgatctttattgttaagtgggatagtattaaagcata----------------tagactga 17298905  T
Q  611 tgatcaca--tctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagtaatatttatattggattgatccgccatgaga 708  Q
    ||||||||  | |||| | ||||||||||||||||||  | ||||||||||||||||||||||| ||||||||||||||||||||||| || ||||||||    
T  17298904 tgatcacacatatcacgggtcatggataaagagttattaaatcttcacatagatataaatattaagagtaatatttatattggattgacccaccatgaga 17298805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 407 - 516
Target Start/End: Original strand, 39537962 - 39538071
Alignment:
Q  407 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 506  Q
    ||||| |||||||||| ||||||||||||||||||||||  | |||||| |||||||||| || ||||||||||||||||||||||||||||||||||||    
T  39537962 acaagccatttctttaatgattttgttttgtttcaaaatggttaagtccttagaatagttggttcgtttaatggaacattaagtataacttaattgtgag 39538061  T
Q  507 accccattaa 516  Q
    ||| ||||||    
T  39538062 acctcattaa 39538071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 578 - 717
Target Start/End: Original strand, 20941018 - 20941156
Alignment:
Q  578 taaagcatagagactattatgtaggtagactgatgatcacatctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagt 677  Q
    |||||| | |||||||||||||| |||||||||||| | |||||||  | |||| ||||  ||| |||| |||||  |||||||||||||||||||||||    
T  20941018 taaagcgtcgagactattatgtatgtagactgatgaccgcatctcatgggtcatagatat-gagatatcaagtctatacatagatataaatattaggagt 20941116  T
Q  678 aatatttatattggattgatccgccatgagaatactacat 717  Q
    ||||||||||||||||||| || || ||||||||||||||    
T  20941117 aatatttatattggattgacccaccgtgagaatactacat 20941156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 578 - 717
Target Start/End: Complemental strand, 25805696 - 25805558
Alignment:
Q  578 taaagcatagagactattatgtaggtagactgatgatcacatctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagt 677  Q
    |||||| | |||||||||||||| |||||||||||| | |||||||  | |||| ||||  ||| |||| |||||  |||||||||||||||||||||||    
T  25805696 taaagcgtcgagactattatgtatgtagactgatgaccgcatctcatgggtcatagatat-gagatatcaagtctatacatagatataaatattaggagt 25805598  T
Q  678 aatatttatattggattgatccgccatgagaatactacat 717  Q
    ||||||||||||||||||| || || ||||||||||||||    
T  25805597 aatatttatattggattgacccaccgtgagaatactacat 25805558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 578 - 717
Target Start/End: Original strand, 31890 - 32028
Alignment:
Q  578 taaagcatagagactattatgtaggtagactgatgatcacatctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagt 677  Q
    |||||| | |||||||||||||| |||||||||||| | |||||||  | |||| ||||  ||| |||| |||||  |||||||||||||||||||||||    
T  31890 taaagcgtcgagactattatgtatgtagactgatgaccgcatctcatgggtcatagatat-gagatatcaagtctatacatagatataaatattaggagt 31988  T
Q  678 aatatttatattggattgatccgccatgagaatactacat 717  Q
    ||||||||||||||||||| || |  ||||||||||||||    
T  31989 aatatttatattggattgacccactgtgagaatactacat 32028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 578 - 717
Target Start/End: Original strand, 23545913 - 23546051
Alignment:
Q  578 taaagcatagagactattatgtaggtagactgatgatcacatctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagt 677  Q
    |||||| | |||||||||||||| |||||||||||| | |||||||  | |||| ||||  ||| |||| |||||  |||||||||||||||||||||||    
T  23545913 taaagcgtcgagactattatgtatgtagactgatgaccgcatctcatgggtcatagatat-gagatatcaagtctatacatagatataaatattaggagt 23546011  T
Q  678 aatatttatattggattgatccgccatgagaatactacat 717  Q
    ||||||||||||||||||| || |  ||||||||||||||    
T  23546012 aatatttatattggattgacccactgtgagaatactacat 23546051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 578 - 717
Target Start/End: Complemental strand, 12789974 - 12789836
Alignment:
Q  578 taaagcatagagactattatgtaggtagactgatgatcacatctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagt 677  Q
    |||||| | |||||||||||||| |||||||||||| | |||||||  | |||| ||||  ||| |||| |||||  ||||||||||||||||||| |||    
T  12789974 taaagcgtcgagactattatgtatgtagactgatgaccgcatctcatgggtcatagatat-gagatatcaagtctatacatagatataaatattagaagt 12789876  T
Q  678 aatatttatattggattgatccgccatgagaatactacat 717  Q
    ||||||||||||||||||| || |  ||||||||||||||    
T  12789875 aatatttatattggattgacccactgtgagaatactacat 12789836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 578 - 717
Target Start/End: Original strand, 22941241 - 22941379
Alignment:
Q  578 taaagcatagagactattatgtaggtagactgatgatcacatctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagt 677  Q
    |||||| | |||||||||||||| |||||||||||| |  ||||||  | |||| ||||  ||| |||| ||| |  |||||||||||||||||||||||    
T  22941241 taaagcgtcgagactattatgtatgtagactgatgaccgtatctcatgggtcatagatat-gagatatcaagtttatacatagatataaatattaggagt 22941339  T
Q  678 aatatttatattggattgatccgccatgagaatactacat 717  Q
    ||||||||||||||||||| || || ||||||||||||||    
T  22941340 aatatttatattggattgacccaccgtgagaatactacat 22941379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 413 - 516
Target Start/End: Original strand, 31886537 - 31886640
Alignment:
Q  413 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacccca 512  Q
    |||||||||| |||||||||||||||||||| ||||||||||| ||||||| ||||| | |||||| |||||| |||||  ||||||| ||||||| |||    
T  31886537 catttctttagtgattttgttttgtttcaaattaataaagtccttagaataattagttcatttaattgaacatcaagtacgacttaatcgtgagactcca 31886636  T
Q  513 ttaa 516  Q
    ||||    
T  31886637 ttaa 31886640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 315 - 371
Target Start/End: Complemental strand, 24695765 - 24695709
Alignment:
Q  315 tgttgggataagccctaatagccaatctatattgattgggtttggctttgtatcatg 371  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24695765 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 24695709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 578 - 717
Target Start/End: Complemental strand, 24933617 - 24933479
Alignment:
Q  578 taaagcatagagactattatgtaggtagactgatgatcacatctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagt 677  Q
    |||||| | |||||||||||||| |||||||||||| | |||||||  | |||| ||||  ||| |||  |||||  ||||||||||||||||||| |||    
T  24933617 taaagcgtcgagactattatgtatgtagactgatgaccgcatctcatgggtcatagatat-gagatattaagtctatacatagatataaatattagaagt 24933519  T
Q  678 aatatttatattggattgatccgccatgagaatactacat 717  Q
    ||||||||||||||||||| || |  ||||||||||||||    
T  24933518 aatatttatattggattgacccactgtgagaatactacat 24933479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 313 - 371
Target Start/End: Complemental strand, 19714800 - 19714742
Alignment:
Q  313 actgttgggataagccctaatagccaatctatattgattgggtttggctttgtatcatg 371  Q
    ||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||    
T  19714800 actgttggagtaagccctaatagccaatctatattgattgggtttggctttgtatcatg 19714742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 578 - 717
Target Start/End: Complemental strand, 12765305 - 12765167
Alignment:
Q  578 taaagcatagagactattatgtaggtagactgatgatcacatctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagt 677  Q
    |||||| | |||||||||||||| |||||||||||| |||||||||  | | || ||||  ||| |||  |||||  |||||  ||||||||||||||||    
T  12765305 taaagcgtcgagactattatgtatgtagactgatgaccacatctcatgggttatagatat-gagatattaagtctatacatatgtataaatattaggagt 12765207  T
Q  678 aatatttatattggattgatccgccatgagaatactacat 717  Q
    |||||||||||||||| || || || ||||||||||||||    
T  12765206 aatatttatattggatagacccaccgtgagaatactacat 12765167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 578 - 717
Target Start/End: Original strand, 31096807 - 31096945
Alignment:
Q  578 taaagcatagagactattatgtaggtagactgatgatcacatctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagt 677  Q
    |||||| | |||||||||||||| |||||||||||| | |||||||  | |||| ||||  ||| |||  |||||  |||||| |||||||  |||||||    
T  31096807 taaagcgtcgagactattatgtatgtagactgatgaccgcatctcatgggtcatagatat-gagatattaagtctatacataggtataaattataggagt 31096905  T
Q  678 aatatttatattggattgatccgccatgagaatactacat 717  Q
    ||||||||||||||||||| || || ||||||||||||||    
T  31096906 aatatttatattggattgacccaccgtgagaatactacat 31096945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 314 - 371
Target Start/End: Complemental strand, 27347779 - 27347722
Alignment:
Q  314 ctgttgggataagccctaatagccaatctatattgattgggtttggctttgtatcatg 371  Q
    |||||||  |||||||||||||||||||||||||||||| ||||||||||||||||||    
T  27347779 ctgttggagtaagccctaatagccaatctatattgattgcgtttggctttgtatcatg 27347722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 323 - 371
Target Start/End: Complemental strand, 19707510 - 19707462
Alignment:
Q  323 taagccctaatagccaatctatattgattgggtttggctttgtatcatg 371  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||    
T  19707510 taagccctaatagccaatctatattgattgagtttggctttgtatcatg 19707462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 578 - 717
Target Start/End: Original strand, 5097642 - 5097780
Alignment:
Q  578 taaagcatagagactattatgtaggtagactgatgatcacatctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagt 677  Q
    |||||| | |||||||||||||| ||||||||||||  ||||||||  | |||| ||||  ||| |||  |||||  |||||  ||||||||||| ||||    
T  5097642 taaagcgtcgagactattatgtatgtagactgatgactacatctcatgggtcatagatat-gagatattaagtctatacataagtataaatattatgagt 5097740  T
Q  678 aatatttatattggattgatccgccatgagaatactacat 717  Q
    ||||||||||||||||| | || || ||||||||||||||    
T  5097741 aatatttatattggattaacccaccgtgagaatactacat 5097780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 578 - 717
Target Start/End: Complemental strand, 7865745 - 7865607
Alignment:
Q  578 taaagcatagagactattatgtaggtagactgatgatcacatctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagt 677  Q
    |||||| | |||||||||||||| |||||||||||| | |||||||  | | || ||||  ||| |||  |||||  |||||| ||||||||||||||||    
T  7865745 taaagcgtcgagactattatgtatgtagactgatgaccgcatctcatgggttatagatat-gagatattaagtctatacataggtataaatattaggagt 7865647  T
Q  678 aatatttatattggattgatccgccatgagaatactacat 717  Q
    |||||||||| ||||| || || || ||||||||||||||    
T  7865646 aatatttatactggatagacccaccgtgagaatactacat 7865607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 578 - 717
Target Start/End: Complemental strand, 9812048 - 9811910
Alignment:
Q  578 taaagcatagagactattatgtaggtagactgatgatcacatctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagt 677  Q
    |||||| | ||||||| |||||| |||||||||||| |||||||||  | | || ||||  ||| |||  |||||  |||||  ||||||||||||||||    
T  9812048 taaagcgtcgagactactatgtatgtagactgatgaccacatctcatgggttatagatat-gagatattaagtctatacatatgtataaatattaggagt 9811950  T
Q  678 aatatttatattggattgatccgccatgagaatactacat 717  Q
    |||||||||||||||| || || || ||||||||||||||    
T  9811949 aatatttatattggatagacccaccgtgagaatactacat 9811910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 578 - 717
Target Start/End: Complemental strand, 12704189 - 12704051
Alignment:
Q  578 taaagcatagagactattatgtaggtagactgatgatcacatctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagt 677  Q
    |||||| | ||||||| |||||| |||||||||||| |||||||||  | | || ||||  ||| |||  |||||  |||||  ||||||||||||||||    
T  12704189 taaagcgtcgagactactatgtatgtagactgatgaccacatctcatgggttatagatat-gagatattaagtctatacatatgtataaatattaggagt 12704091  T
Q  678 aatatttatattggattgatccgccatgagaatactacat 717  Q
    |||||||||||||||| || || || ||||||||||||||    
T  12704090 aatatttatattggatagacccaccgtgagaatactacat 12704051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 433 - 523
Target Start/End: Complemental strand, 33477479 - 33477389
Alignment:
Q  433 tttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccattaaacataag 523  Q
    ||||||||||||||||||||||| || ||||||||| | | |||||||| |||||||| | |  |||| |||||||| |||||| ||||||    
T  33477479 tttgtttcaaaataataaagtccttacaatagttaggctgattaatggatcattaagtgtgatctaatcgtgagacctcattaatcataag 33477389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 578 - 699
Target Start/End: Original strand, 26245093 - 26245213
Alignment:
Q  578 taaagcatagagactattatgtaggtagactgatgatcacatctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagt 677  Q
    |||||| | |||||||||||||| |||||||||||||  |||||||  | |||| ||||  ||| |||  ||| |  |||||| ||||||||||||||||    
T  26245093 taaagcgtcgagactattatgtatgtagactgatgattgcatctcatgggtcatagatat-gagatattaagtttatacataggtataaatattaggagt 26245191  T
Q  678 aatatttatattggattgatcc 699  Q
    |||||||||| | |||||||||    
T  26245192 aatatttatacttgattgatcc 26245213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 323 - 371
Target Start/End: Complemental strand, 18570156 - 18570108
Alignment:
Q  323 taagccctaatagccaatctatattgattgggtttggctttgtatcatg 371  Q
    ||||| |||||||| |||||||||| |||||||||||||||||||||||    
T  18570156 taagctctaatagctaatctatattaattgggtttggctttgtatcatg 18570108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 209 - 315
Target Start/End: Original strand, 39419852 - 39419956
Alignment:
Q  209 actgaatcaatatagatagagttgcgctgagactaaatttcaataactattcctcatatgtttcctcttaatcgattgtatatactttttatgcctcaga 308  Q
    |||||| ||||||||||| ||||| | || || | ||||||||||| |||| ||| |||||||| | |||||||||||  |||||||||||||| ||| |    
T  39419852 actgaaccaatatagataaagttgtgttgggattgaatttcaataattatttctcttatgtttcatattaatcgattg--tatactttttatgcttcaaa 39419949  T
Q  309 tacaact 315  Q
    || ||||    
T  39419950 tataact 39419956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 656 - 710
Target Start/End: Complemental strand, 18829519 - 18829465
Alignment:
Q  656 catagatataaatattaggagtaatatttatattggattgatccgccatgagaat 710  Q
    |||| |||||||||||||||  ||||||||||||||||||| || ||||||||||    
T  18829519 catatatataaatattaggaccaatatttatattggattgacccaccatgagaat 18829465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 589 - 717
Target Start/End: Complemental strand, 20100543 - 20100416
Alignment:
Q  589 gactattatgtaggtagactgatgatcacatctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagtaatatttatat 688  Q
    |||||||||||| ||||||||||||||||||||||  | ||||| || | ||| |||  |||||  | |||| ||| |||||||||||||||| |||||     
T  20100543 gactattatgtatgtagactgatgatcacatctcatgggtcatgaat-atgagatattaagtctatagataggtatcaatattaggagtaatacttatac 20100445  T
Q  689 tggattgatccgccatgagaatactacat 717  Q
    ||| |||| ||  | |||||| |||||||    
T  20100444 tggcttgacccaacgtgagaaaactacat 20100416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 220 - 315
Target Start/End: Original strand, 22181853 - 22181946
Alignment:
Q  220 atagatagagttgcgctgagactaaatttcaataactattcctcatatgtttcctcttaatcgattgtatatactttttatgcctcagatacaact 315  Q
    ||||||| ||||| |||| || | ||||||||||||||||| |  |||| ||||||||||| |||||  |||||||||||||| ||| ||| ||||    
T  22181853 atagatatagttgtgctgggattgaatttcaataactattcattgtatggttcctcttaattgattg--tatactttttatgcttcatatataact 22181946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 256 - 288
Target Start/End: Complemental strand, 42410357 - 42410325
Alignment:
Q  256 tattcctcatatgtttcctcttaatcgattgta 288  Q
    |||||||||||||||||||||||||||||||||    
T  42410357 tattcctcatatgtttcctcttaatcgattgta 42410325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 323 - 370
Target Start/End: Original strand, 39537878 - 39537925
Alignment:
Q  323 taagccctaatagccaatctatattgattgggtttggctttgtatcat 370  Q
    |||||||||||||||||||||| |||| || |||| ||||||||||||    
T  39537878 taagccctaatagccaatctatgttgactgagtttagctttgtatcat 39537925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 457 - 525
Target Start/End: Original strand, 11479420 - 11479489
Alignment:
Q  457 tagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccc-cattaaacataagga 525  Q
    ||||||| |||||  |||||||| || ||||||| | |||| |||||||||||| |||||||||||||||    
T  11479420 tagaataattagtgtgtttaatgaaatattaagtgtgacttgattgtgagaccctcattaaacataagga 11479489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 669 - 710
Target Start/End: Complemental strand, 18806619 - 18806578
Alignment:
Q  669 attaggagtaatatttatattggattgatccgccatgagaat 710  Q
    ||||| |||||| |||||||||||||||||| ||||||||||    
T  18806619 attagaagtaatgtttatattggattgatccaccatgagaat 18806578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 669 - 710
Target Start/End: Complemental strand, 18806799 - 18806758
Alignment:
Q  669 attaggagtaatatttatattggattgatccgccatgagaat 710  Q
    ||||| |||||| |||||||||||||||||| ||||||||||    
T  18806799 attagaagtaatgtttatattggattgatccaccatgagaat 18806758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0186 (Bit Score: 275; Significance: 1e-153; HSPs: 2)
Name: scaffold0186
Description:

Target: scaffold0186; HSP #1
Raw Score: 275; E-Value: 1e-153
Query Start/End: Original strand, 407 - 717
Target Start/End: Complemental strand, 26197 - 25887
Alignment:
Q  407 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 506  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||| |||||||||||||||||    
T  26197 acaagacatttctttattgattttgttttgtttcaaaataataaagtccttagaatagttagtccatttaatggaacattaaatataacttaattgtgag 26098  T
Q  507 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 606  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||| ||||||||||||||||||    
T  26097 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgaaaagtgggatatcattaaagcatagcgactattatgtaggtaga 25998  T
Q  607 ctgatgatcacatctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagtaatatttatattggattgatccgccatga 706  Q
    |||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25997 ctgatgatcacatctcacagatcatggataaagagttatcaagacttcacatagatataaatattaggagtaatatttatattggattgatccgccatga 25898  T
Q  707 gaatactacat 717  Q
    |||||||||||    
T  25897 gaatactacat 25887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0186; HSP #2
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 315 - 370
Target Start/End: Complemental strand, 26286 - 26231
Alignment:
Q  315 tgttgggataagccctaatagccaatctatattgattgggtttggctttgtatcat 370  Q
    |||||| |||||||||||||| ||||||||||||||||||||||||||||||||||    
T  26286 tgttggaataagccctaatagtcaatctatattgattgggtttggctttgtatcat 26231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0657 (Bit Score: 263; Significance: 1e-146; HSPs: 2)
Name: scaffold0657
Description:

Target: scaffold0657; HSP #1
Raw Score: 263; E-Value: 1e-146
Query Start/End: Original strand, 407 - 717
Target Start/End: Original strand, 993 - 1303
Alignment:
Q  407 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 506  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||    
T  993 acaagacatttctttattgattttgttttgtttcaaaataataaagtccctaaaatagttagtccgtttaatgaaacattaagtataacttaattgtgag 1092  T
Q  507 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 606  Q
    |||||||||||||||| |||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  1093 accccattaaacataaagaaactattctcaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 1192  T
Q  607 ctgatgatcacatctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagtaatatttatattggattgatccgccatga 706  Q
    |||||||||||||||||||||||||||||||| ||||||| ||||||  ||||||||||||||||| ||||||||||||||||||||||||| |||||||    
T  1193 ctgatgatcacatctcacagatcatggataaaaagttatcaagtcttgccatagatataaatattaagagtaatatttatattggattgatctgccatga 1292  T
Q  707 gaatactacat 717  Q
    |||||||||||    
T  1293 gaatactacat 1303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0657; HSP #2
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 315 - 371
Target Start/End: Original strand, 901 - 957
Alignment:
Q  315 tgttgggataagccctaatagccaatctatattgattgggtttggctttgtatcatg 371  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  901 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063 (Bit Score: 257; Significance: 1e-143; HSPs: 2)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 257; E-Value: 1e-143
Query Start/End: Original strand, 409 - 717
Target Start/End: Original strand, 5531 - 5839
Alignment:
Q  409 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 508  Q
    |||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5531 aaggcatttctttattgatttatttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 5630  T
Q  509 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagact 608  Q
    ||| ||||||||||||||| |||||| |||||||  ||||||||||||| |||||||||||||||||||||||||||| |||||||||||| ||||||||    
T  5631 cccgttaaacataaggaaattattcttaaagtatatgtagtcaagctttattgagaagtgggatatcattaaagcataaagactattatgtgggtagact 5730  T
Q  609 gatgatcacatctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagtaatatttatattggattgatccgccatgaga 708  Q
    |||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  5731 gatgatcacatctcacaggtcatggataaagagttatcaagtcttcacatagatataaatattaggagtaatatttatattggattgatccgccatgtga 5830  T
Q  709 atactacat 717  Q
    |||||||||    
T  5831 atactacat 5839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063; HSP #2
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 323 - 371
Target Start/End: Original strand, 5444 - 5492
Alignment:
Q  323 taagccctaatagccaatctatattgattgggtttggctttgtatcatg 371  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||    
T  5444 taagccctaatagccaatctatattgtttgggtttggctttgtatcatg 5492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 138; Significance: 9e-72; HSPs: 3)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 138; E-Value: 9e-72
Query Start/End: Original strand, 409 - 590
Target Start/End: Complemental strand, 230545 - 230365
Alignment:
Q  409 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 508  Q
    ||||||||||||||||||||||||||||||||||||||||||||| | || |||||||||||||||||||||||||||||||||||||||||||||||||    
T  230545 aaggcatttctttattgattttgttttgtttcaaaataataaagttcttataatagttagtccgtttaatggaacattaagtataacttaattgtgagac 230446  T
Q  509 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagaga 590  Q
    ||| |||||||||||||||| ||||| |||||||  ||||||||| ||| ||||||||||||||||||||||||||||||||    
T  230445 ccc-ttaaacataaggaaaccattcttaaagtatttgtagtcaagatttattgagaagtgggatatcattaaagcatagaga 230365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 638 - 717
Target Start/End: Complemental strand, 230367 - 230288
Alignment:
Q  638 agagttatccagtcttcacatagatataaatattaggagtaatatttatattggattgatccgccatgagaatactacat 717  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  230367 agagttatcaagtcttcacatagatataaatattaggagtaatatttatattggattgatctgccatgagaatactacat 230288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #3
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 307 - 371
Target Start/End: Complemental strand, 230648 - 230584
Alignment:
Q  307 gatacaactgttgggataagccctaatagccaatctatattgattgggtttggctttgtatcatg 371  Q
    |||||| |||||||  |||||  ||||||||||||||||||||||||||||||||||||||||||    
T  230648 gatacatctgttggagtaagcaataatagccaatctatattgattgggtttggctttgtatcatg 230584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 68; Significance: 6e-30; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 564 - 710
Target Start/End: Complemental strand, 90166 - 90019
Alignment:
Q  564 aagtgggatatcattaaagcatagagactattatgtaggtagactgatgatcacatctcacagatcatggat-aaagagttatccagtcttcacatagat 662  Q
    ||||||||||  ||||||||||| |||||| ||||||| ||||||||| |||||||||||| |||||||| | ||||||||||| |  ||||||||||||    
T  90166 aagtgggataatattaaagcataaagactactatgtagatagactgataatcacatctcacggatcatgggtaaaagagttatcaacacttcacatagat 90067  T
Q  663 ataaatattaggagtaatatttatattggattgatccgccatgagaat 710  Q
    |||||||||| |  ||| ||||||||||||||||  ||| ||||||||    
T  90066 ataaatattacgtataacatttatattggattgacacgcgatgagaat 90019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0378 (Bit Score: 64; Significance: 1e-27; HSPs: 1)
Name: scaffold0378
Description:

Target: scaffold0378; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 578 - 717
Target Start/End: Original strand, 8296 - 8434
Alignment:
Q  578 taaagcatagagactattatgtaggtagactgatgatcacatctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagt 677  Q
    |||||| | |||||||||||||| |||||||||||| | |||||||  | |||| ||||  ||| |||| |||||  |||||||||||||||||||||||    
T  8296 taaagcgtcgagactattatgtatgtagactgatgaccgcatctcatgggtcatagatat-gagatatcaagtctatacatagatataaatattaggagt 8394  T
Q  678 aatatttatattggattgatccgccatgagaatactacat 717  Q
    ||||||||||||||||||| || || ||||||||||||||    
T  8395 aatatttatattggattgacccaccgtgagaatactacat 8434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0112 (Bit Score: 64; Significance: 1e-27; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 578 - 717
Target Start/End: Original strand, 174 - 312
Alignment:
Q  578 taaagcatagagactattatgtaggtagactgatgatcacatctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagt 677  Q
    |||||| | |||||||||||||| || ||||||||| |||||||||  | |||| ||||  ||| |||| |||||  |||||||||||||||||||||||    
T  174 taaagcgtcgagactattatgtatgtcgactgatgaccacatctcatgggtcatagatat-gagatatcaagtctatacatagatataaatattaggagt 272  T
Q  678 aatatttatattggattgatccgccatgagaatactacat 717  Q
    ||||||||||||||||||| || || ||||||||||||||    
T  273 aatatttatattggattgacccaccgtgagaatactacat 312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 61; Significance: 8e-26; HSPs: 2)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 407 - 471
Target Start/End: Complemental strand, 8510 - 8446
Alignment:
Q  407 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtcc 471  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8510 acaagacatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtcc 8446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176; HSP #2
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 315 - 371
Target Start/End: Complemental strand, 8602 - 8546
Alignment:
Q  315 tgttgggataagccctaatagccaatctatattgattgggtttggctttgtatcatg 371  Q
    |||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  8602 tgttggaataagccctaatagccaatctatattgattgggttcggctttgtatcatg 8546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0264 (Bit Score: 60; Significance: 3e-25; HSPs: 1)
Name: scaffold0264
Description:

Target: scaffold0264; HSP #1
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 578 - 717
Target Start/End: Complemental strand, 3986 - 3848
Alignment:
Q  578 taaagcatagagactattatgtaggtagactgatgatcacatctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagt 677  Q
    |||||| | |||||||||||||| |||||||||||| | |||||||  | |||| ||||  ||| |||| |||||  |||||||||||||||||||||||    
T  3986 taaagcgtcgagactattatgtatgtagactgatgaccgcatctcatgggtcatagatat-gagatatcaagtctatacatagatataaatattaggagt 3888  T
Q  678 aatatttatattggattgatccgccatgagaatactacat 717  Q
    ||||||||||||||||||| || |  ||||||||||||||    
T  3887 aatatttatattggattgacccactgtgagaatactacat 3848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 60; Significance: 3e-25; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 578 - 717
Target Start/End: Original strand, 119721 - 119859
Alignment:
Q  578 taaagcatagagactattatgtaggtagactgatgatcacatctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagt 677  Q
    |||||| | |||||||||||||| |||||||||||| | |||||||  | |||| ||||  ||| |||| |||||  |||||||||||||||||||||||    
T  119721 taaagcgtcgagactattatgtacgtagactgatgaccgcatctcatgggtcatagatat-gagatatcaagtctatacatagatataaatattaggagt 119819  T
Q  678 aatatttatattggattgatccgccatgagaatactacat 717  Q
    ||||||||||||||||||| || |  ||||||||||||||    
T  119820 aatatttatattggattgacccactgtgagaatactacat 119859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 60; Significance: 3e-25; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 578 - 717
Target Start/End: Complemental strand, 130535 - 130397
Alignment:
Q  578 taaagcatagagactattatgtaggtagactgatgatcacatctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagt 677  Q
    |||||| | |||||||||||||| |||||||||||| | |||||||  | |||| ||||  ||| |||| |||||  |||||||||||||||||||||||    
T  130535 taaagcgtcgagactattatgtatgtagactgatgaccgcatctcatgggtcatagatat-gagatatcaagtctatacatagatataaatattaggagt 130437  T
Q  678 aatatttatattggattgatccgccatgagaatactacat 717  Q
    ||||||||||||||||||| || |  ||||||||||||||    
T  130436 aatatttatattggattgacccactgtgagaatactacat 130397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0203 (Bit Score: 53; Significance: 5e-21; HSPs: 1)
Name: scaffold0203
Description:

Target: scaffold0203; HSP #1
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 315 - 371
Target Start/End: Complemental strand, 23825 - 23769
Alignment:
Q  315 tgttgggataagccctaatagccaatctatattgattgggtttggctttgtatcatg 371  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23825 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 23769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0326 (Bit Score: 49; Significance: 1e-18; HSPs: 2)
Name: scaffold0326
Description:

Target: scaffold0326; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 315 - 371
Target Start/End: Original strand, 16523 - 16579
Alignment:
Q  315 tgttgggataagccctaatagccaatctatattgattgggtttggctttgtatcatg 371  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||| |||||||    
T  16523 tgttggaataagccctaatagccaatctatattgattgggtttggctttatatcatg 16579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0326; HSP #2
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 407 - 440
Target Start/End: Original strand, 16615 - 16648
Alignment:
Q  407 acaaggcatttctttattgattttgttttgtttc 440  Q
    |||||||||||||||||||||||||||||| |||    
T  16615 acaaggcatttctttattgattttgttttgnttc 16648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 48; Significance: 5e-18; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 578 - 717
Target Start/End: Complemental strand, 67685 - 67547
Alignment:
Q  578 taaagcatagagactattatgtaggtagactgatgatcacatctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagt 677  Q
    |||||| | ||||||||||||||  ||||||||||| | |||||||  | | || ||||  ||| |||  |||||  |||||| ||||||||||||||||    
T  67685 taaagcgtcgagactattatgtatatagactgatgaccgcatctcatgggttatagatat-gagatattaagtctatacataggtataaatattaggagt 67587  T
Q  678 aatatttatattggattgatccgccatgagaatactacat 717  Q
    ||||||||||||||||||| || || ||||||||||||||    
T  67586 aatatttatattggattgacccaccgtgagaatactacat 67547  T

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Target: scaffold0031 (Bit Score: 47; Significance: 2e-17; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 587 - 717
Target Start/End: Complemental strand, 40290 - 40161
Alignment:
Q  587 gagactattatgtaggtagactgatgatcacatctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagtaatatttat 686  Q
    |||||||||||||| |||||||||||  |||||||||  | |||||||||  ||| |||  |||||  |||||| |||||||||||||||||||||||||    
T  40290 gagactattatgtatgtagactgatggccacatctcatgggtcatggatat-gagatattaagtctatacataggtataaatattaggagtaatatttat 40192  T
Q  687 attggattgatccgccatgagaatactacat 717  Q
    |  ||||||| || |  ||||||||||||||    
T  40191 accggattgacccactgtgagaatactacat 40161  T

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Target: scaffold0466 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0466
Description:

Target: scaffold0466; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 578 - 717
Target Start/End: Complemental strand, 13260 - 13122
Alignment:
Q  578 taaagcatagagactattatgtaggtagactgatgatcacatctcacagatcatggataaagagttatccagtcttcacatagatataaatattaggagt 677  Q
    |||||| | |||||||||||||| |||||| ||||| |||||||||  | ||||  |||  ||| |||  |||||  |||||| ||||||||||||||||    
T  13260 taaagcgtcgagactattatgtatgtagaccgatgaccacatctcatgggtcatatatat-gagatattaagtctatacataggtataaatattaggagt 13162  T
Q  678 aatatttatattggattgatccgccatgagaatactacat 717  Q
    ||||||||||  ||||||| || || ||||||||||||||    
T  13161 aatatttataccggattgacccaccgtgagaatactacat 13122  T

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Target: scaffold0637 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0637
Description:

Target: scaffold0637; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 314 - 371
Target Start/End: Original strand, 8943 - 9000
Alignment:
Q  314 ctgttgggataagccctaatagccaatctatattgattgggtttggctttgtatcatg 371  Q
    ||||||| |||||||| |||||||||||||| |||| |||||||||||||||||||||    
T  8943 ctgttggaataagcccaaatagccaatctatgttgaatgggtttggctttgtatcatg 9000  T

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Target: scaffold0705 (Bit Score: 41; Significance: 0.00000000000007; HSPs: 1)
Name: scaffold0705
Description:

Target: scaffold0705; HSP #1
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 315 - 371
Target Start/End: Complemental strand, 97 - 41
Alignment:
Q  315 tgttgggataagccctaatagccaatctatattgattgggtttggctttgtatcatg 371  Q
    |||||| |||||||||||||||||||||||| ||||||  |||||||||||||||||    
T  97 tgttggaataagccctaatagccaatctataatgattgattttggctttgtatcatg 41  T

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Target: scaffold0111 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 655 - 714
Target Start/End: Original strand, 26609 - 26668
Alignment:
Q  655 acatagatataaatattaggagtaatatttatattggattgatccgccatgagaatacta 714  Q
    |||||| |||||||||||||||||||||||||| |||||||| || || |||||||||||    
T  26609 acataggtataaatattaggagtaatatttatactggattgacccaccttgagaatacta 26668  T

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Target: scaffold0565 (Bit Score: 37; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0565
Description:

Target: scaffold0565; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 323 - 371
Target Start/End: Complemental strand, 10250 - 10202
Alignment:
Q  323 taagccctaatagccaatctatattgattgggtttggctttgtatcatg 371  Q
    ||||| |||||||||||||||||||||||| ||||| ||||||||||||    
T  10250 taagctctaatagccaatctatattgattgagtttgactttgtatcatg 10202  T

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Target: scaffold0565; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 426 - 457
Target Start/End: Complemental strand, 10158 - 10127
Alignment:
Q  426 attttgttttgtttcaaaataataaagtccct 457  Q
    ||||||||||||||||||||||||||||||||    
T  10158 attttgttttgtttcaaaataataaagtccct 10127  T

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Target: scaffold0767 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0767
Description:

Target: scaffold0767; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 313 - 351
Target Start/End: Complemental strand, 39 - 1
Alignment:
Q  313 actgttgggataagccctaatagccaatctatattgatt 351  Q
    |||||||| ||||||||||||||||||||||||||||||    
T  39 actgttggaataagccctaatagccaatctatattgatt 1  T

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Target: scaffold0032 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 436 - 672
Target Start/End: Original strand, 92194 - 92432
Alignment:
Q  436 gtttcaaaataataaagtccctagaatagttagtccgtttaa-tggaacattaagtataacttaattgtgagaccccattaaacataaggaaactattct 534  Q
    |||| ||| |||||||||| ||||||||  ||||   ||||| ||||||||||||||||||||||| |||||||  || ||||||  | |  | ||||||    
T  92194 gttttaaagtaataaagtctctagaatatctagttattttaaatggaacattaagtataacttaatcgtgagacagcaataaacagcaaggcattattct 92293  T
Q  535 caaagtatccgtagtcaagctttgttgagaagtgggatatcatt-aaagcatagagactattatgtaggtagactgatgatcacatctcacagatcatgg 633  Q
     |||  || ||||||||||||||  || | || |||||| | || ||| | |||| |||||||| | | |||||||||||| |||| ||||   ||||||    
T  92294 taaaacattcgtagtcaagctttagtgtggagagggataactttaaaatcttagaaactattatatggctagactgatgattacatgtcacgagtcatgg 92393  T
Q  634 ataaagagttatccagtcttcacatagatataaatatta 672  Q
    |||| || ||||| |||| || || | ||||||||||||    
T  92394 ataaggaattatcaagtcatcgcacatatataaatatta 92432  T

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Target: scaffold0376 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0376
Description:

Target: scaffold0376; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 662 - 717
Target Start/End: Complemental strand, 11758 - 11703
Alignment:
Q  662 tataaatattaggagtaatatttatattggattgatccgccatgagaatactacat 717  Q
    |||||||||||||||||||||||||| ||||| || || |  ||||||||||||||    
T  11758 tataaatattaggagtaatatttatactggatagacccactgtgagaatactacat 11703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 664 - 715
Target Start/End: Original strand, 8807 - 8858
Alignment:
Q  664 taaatattaggagtaatatttatattggattgatccgccatgagaatactac 715  Q
    |||||||||||||||||||||||| | |||||| || | |||||||||||||    
T  8807 taaatattaggagtaatatttatactagattgacccccaatgagaatactac 8858  T

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Target: scaffold0118 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 626 - 718
Target Start/End: Original strand, 45956 - 46052
Alignment:
Q  626 gatcatggataaagagttatccagtcttcacatagatataaatat----taggagtaatatttatattggattgatccgccatgagaatactacatg 718  Q
    ||||||||||||| |||| || | | |||| ||||||||||||||    || ||||||||||||||||| ||||| || |||| ||||| |||||||    
T  45956 gatcatggataaaaagttgtcaaatattcatatagatataaatatatattatgagtaatatttatattgaattgacccaccattagaatgctacatg 46052  T

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Target: scaffold0034 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 662 - 717
Target Start/End: Complemental strand, 83243 - 83188
Alignment:
Q  662 tataaatattaggagtaatatttatattggattgatccgccatgagaatactacat 717  Q
    ||||||||| || ||||||||||||| |||||||| || | |||||||||||||||    
T  83243 tataaatatcagaagtaatatttatactggattgacccacaatgagaatactacat 83188  T

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Target: scaffold0393 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0393
Description:

Target: scaffold0393; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 578 - 623
Target Start/End: Complemental strand, 15134 - 15089
Alignment:
Q  578 taaagcatagagactattatgtaggtagactgatgatcacatctca 623  Q
    |||||||| |||||||||||||| |||||||||||| | |||||||    
T  15134 taaagcatcgagactattatgtatgtagactgatgaccgcatctca 15089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0170 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0170
Description:

Target: scaffold0170; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 330 - 367
Target Start/End: Original strand, 5893 - 5930
Alignment:
Q  330 taatagccaatctatattgattgggtttggctttgtat 367  Q
    ||||||||||||||||||||||| ||||| ||||||||    
T  5893 taatagccaatctatattgattgagtttgactttgtat 5930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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