View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1193_low_18 (Length: 319)

Name: NF1193_low_18
Description: NF1193
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1193_low_18
NF1193_low_18
[»] chr4 (26 HSPs)
chr4 (135-281)||(49112840-49112986)
chr4 (96-157)||(29195096-29195157)
chr4 (99-158)||(37980160-37980219)
chr4 (96-158)||(21344818-21344880)
chr4 (96-158)||(38206138-38206200)
chr4 (96-158)||(42281246-42281308)
chr4 (96-158)||(56409952-56410014)
chr4 (98-150)||(39030134-39030186)
chr4 (100-158)||(37455574-37455633)
chr4 (96-158)||(46295098-46295161)
chr4 (96-158)||(25434671-25434732)
chr4 (96-149)||(19238599-19238652)
chr4 (96-132)||(55427239-55427275)
chr4 (96-139)||(6606059-6606102)
chr4 (96-131)||(9241065-9241100)
chr4 (99-150)||(20832535-20832586)
chr4 (96-158)||(37109363-37109426)
chr4 (96-131)||(51250562-51250597)
chr4 (96-161)||(8325388-8325454)
chr4 (100-158)||(25414227-25414285)
chr4 (100-158)||(32475107-32475165)
chr4 (96-158)||(37492730-37492791)
chr4 (96-132)||(37720253-37720289)
chr4 (96-128)||(44865335-44865367)
chr4 (171-211)||(55256150-55256190)
chr4 (96-139)||(55256230-55256274)
[»] chr3 (23 HSPs)
chr3 (97-158)||(42799760-42799821)
chr3 (96-161)||(18316508-18316573)
chr3 (96-161)||(53863877-53863942)
chr3 (96-142)||(3054995-3055041)
chr3 (96-197)||(42430336-42430443)
chr3 (96-149)||(26871526-26871579)
chr3 (98-158)||(15034348-15034408)
chr3 (96-158)||(35623279-35623344)
chr3 (96-158)||(11092182-11092244)
chr3 (96-158)||(34844372-34844434)
chr3 (96-158)||(40268490-40268552)
chr3 (96-158)||(43303759-43303821)
chr3 (96-158)||(24478156-24478218)
chr3 (96-158)||(40777015-40777076)
chr3 (96-161)||(47079702-47079767)
chr3 (96-132)||(8051215-8051251)
chr3 (96-131)||(10499149-10499184)
chr3 (96-138)||(24459991-24460033)
chr3 (96-138)||(25925534-25925576)
chr3 (96-134)||(27923080-27923118)
chr3 (96-149)||(36720382-36720435)
chr3 (96-132)||(7207611-7207647)
chr3 (96-132)||(9832498-9832534)
[»] chr8 (20 HSPs)
chr8 (96-158)||(22268946-22269008)
chr8 (96-158)||(26688866-26688929)
chr8 (96-158)||(6530808-6530870)
chr8 (96-161)||(11793530-11793596)
chr8 (96-158)||(34778736-34778798)
chr8 (96-156)||(29206346-29206406)
chr8 (96-158)||(18897167-18897230)
chr8 (97-158)||(2203494-2203556)
chr8 (97-158)||(3624582-3624644)
chr8 (96-149)||(968363-968416)
chr8 (96-149)||(6436577-6436630)
chr8 (96-149)||(16852341-16852394)
chr8 (96-149)||(29431012-29431065)
chr8 (95-132)||(29858088-29858125)
chr8 (96-149)||(35287717-35287770)
chr8 (96-132)||(8485000-8485036)
chr8 (96-132)||(18540299-18540335)
chr8 (96-132)||(19703526-19703562)
chr8 (96-132)||(23874421-23874457)
chr8 (118-158)||(40136975-40137015)
[»] chr1 (23 HSPs)
chr1 (96-158)||(15581154-15581216)
chr1 (96-158)||(37046986-37047048)
chr1 (96-161)||(39012292-39012357)
chr1 (101-158)||(48400178-48400235)
chr1 (106-158)||(6127999-6128051)
chr1 (96-139)||(24857862-24857905)
chr1 (96-158)||(34228875-34228937)
chr1 (96-158)||(39714791-39714853)
chr1 (99-158)||(4824975-4825035)
chr1 (102-158)||(39964512-39964568)
chr1 (98-158)||(44486170-44486230)
chr1 (96-160)||(49101779-49101843)
chr1 (96-131)||(19528367-19528402)
chr1 (96-158)||(31794276-31794339)
chr1 (91-149)||(9165217-9165275)
chr1 (96-158)||(19480528-19480590)
chr1 (120-211)||(38939227-38939326)
chr1 (104-158)||(41470623-41470677)
chr1 (96-149)||(19940894-19940947)
chr1 (100-149)||(21547502-21547551)
chr1 (96-149)||(40257400-40257453)
chr1 (96-149)||(52116803-52116856)
chr1 (96-132)||(952512-952548)
[»] chr7 (25 HSPs)
chr7 (96-161)||(5273599-5273665)
chr7 (96-161)||(25956302-25956367)
chr7 (96-158)||(5579246-5579309)
chr7 (96-161)||(38374608-38374674)
chr7 (96-158)||(48125187-48125249)
chr7 (96-161)||(35328884-35328949)
chr7 (96-149)||(41487363-41487416)
chr7 (96-139)||(6426084-6426127)
chr7 (96-158)||(31835193-31835256)
chr7 (102-210)||(12877160-12877265)
chr7 (97-158)||(29385755-29385817)
chr7 (96-209)||(45559201-45559314)
chr7 (97-149)||(44628205-44628257)
chr7 (96-128)||(48039690-48039722)
chr7 (96-158)||(26459422-26459485)
chr7 (173-211)||(5257795-5257833)
chr7 (96-149)||(23301624-23301677)
chr7 (96-149)||(25021357-25021410)
chr7 (96-149)||(43590908-43590961)
chr7 (96-128)||(30579336-30579368)
chr7 (96-132)||(39499758-39499794)
chr7 (96-132)||(39631845-39631881)
chr7 (96-132)||(42836040-42836076)
chr7 (99-139)||(44146583-44146623)
chr7 (96-132)||(46531358-46531394)
[»] chr5 (10 HSPs)
chr5 (96-161)||(31669034-31669099)
chr5 (98-158)||(16172996-16173056)
chr5 (96-161)||(19373240-19373305)
chr5 (96-158)||(16457811-16457874)
chr5 (96-132)||(21589289-21589325)
chr5 (96-150)||(18989022-18989076)
chr5 (97-158)||(14656656-14656717)
chr5 (96-149)||(21549159-21549212)
chr5 (96-161)||(32340346-32340411)
chr5 (99-158)||(16436622-16436681)
[»] chr2 (19 HSPs)
chr2 (96-159)||(32106567-32106631)
chr2 (96-158)||(342396-342458)
chr2 (96-158)||(3697412-3697474)
chr2 (96-158)||(16525179-16525241)
chr2 (96-158)||(18825342-18825404)
chr2 (96-158)||(26482094-26482156)
chr2 (98-158)||(30359657-30359718)
chr2 (96-161)||(42602555-42602621)
chr2 (96-158)||(43964001-43964063)
chr2 (99-148)||(6890337-6890386)
chr2 (96-132)||(37480076-37480112)
chr2 (96-158)||(41908650-41908713)
chr2 (96-158)||(42327407-42327470)
chr2 (96-130)||(31245484-31245518)
chr2 (96-149)||(7799057-7799110)
chr2 (173-210)||(11138668-11138705)
chr2 (98-158)||(13747646-13747706)
chr2 (96-132)||(23052562-23052598)
chr2 (96-132)||(37756010-37756046)
[»] chr6 (13 HSPs)
chr6 (96-158)||(28028531-28028593)
chr6 (97-161)||(20864215-20864279)
chr6 (96-158)||(22684-22746)
chr6 (100-158)||(6691563-6691621)
chr6 (96-132)||(14557963-14557999)
chr6 (96-136)||(24334060-24334100)
chr6 (117-158)||(6384015-6384056)
chr6 (96-149)||(12188325-12188378)
chr6 (96-149)||(21418471-21418524)
chr6 (102-139)||(24507568-24507605)
chr6 (96-149)||(33549105-33549158)
chr6 (99-131)||(6776647-6776679)
chr6 (99-158)||(10338186-10338246)
[»] scaffold0189 (1 HSPs)
scaffold0189 (100-158)||(17736-17794)
[»] scaffold0260 (1 HSPs)
scaffold0260 (96-132)||(15360-15396)
[»] scaffold0337 (1 HSPs)
scaffold0337 (102-139)||(1760-1797)
[»] scaffold0258 (1 HSPs)
scaffold0258 (96-149)||(15345-15398)
[»] scaffold0065 (1 HSPs)
scaffold0065 (102-139)||(12196-12233)


Alignment Details
Target: chr4 (Bit Score: 139; Significance: 1e-72; HSPs: 26)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 135 - 281
Target Start/End: Complemental strand, 49112986 - 49112840
Alignment:
Q  135 tggagcgttctcctctcaaggtcttagctccccaaagccaatttcggtgggctagtttgacttcttaaaagaaaaaacaagaacactatgctactctgaa 234  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  49112986 tggagcgttctcctctcaaggtcttagctccccaaagccaatttcggtgggctagtttgacttcttaaaagaaaaaacaagaacactatgctactcttaa 49112887  T
Q  235 agtagattacagagtaaacagtaaaaactttctagtcgatagtctgt 281  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||    
T  49112886 agtagattacagagtaaacagtaaaaactttctagttgatagtctgt 49112840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 96 - 157
Target Start/End: Original strand, 29195096 - 29195157
Alignment:
Q  96 acccacttgggttggcctggtggtgttggcttgggacattggagcgttctcctctcaaggtc 157  Q
    ||||||||||||||||||||||||||||||||||||| |||||| || ||||||||||||||    
T  29195096 acccacttgggttggcctggtggtgttggcttgggaccttggagtgtgctcctctcaaggtc 29195157  T

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Target: chr4; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 99 - 158
Target Start/End: Complemental strand, 37980219 - 37980160
Alignment:
Q  99 cacttgggttggcctggtggtgttggcttgggacattggagcgttctcctctcaaggtct 158  Q
    ||||||||||||||||||| |||||||||||||| |||||| || |||||||||||||||    
T  37980219 cacttgggttggcctggtgatgttggcttgggaccttggagtgtgctcctctcaaggtct 37980160  T

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Target: chr4; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 96 - 158
Target Start/End: Original strand, 21344818 - 21344880
Alignment:
Q  96 acccacttgggttggcctggtggtgttggcttgggacattggagcgttctcctctcaaggtct 158  Q
    ||||||||||||||||||| || |||||||||||||| |||||| || |||||||||||||||    
T  21344818 acccacttgggttggcctgatgatgttggcttgggaccttggagtgtgctcctctcaaggtct 21344880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 96 - 158
Target Start/End: Complemental strand, 38206200 - 38206138
Alignment:
Q  96 acccacttgggttggcctggtggtgttggcttgggacattggagcgttctcctctcaaggtct 158  Q
    |||||||||||||| |||||||||| ||||||||||| |||||| || |||||||||||||||    
T  38206200 acccacttgggttgacctggtggtgctggcttgggaccttggagtgtgctcctctcaaggtct 38206138  T

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Target: chr4; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 96 - 158
Target Start/End: Complemental strand, 42281308 - 42281246
Alignment:
Q  96 acccacttgggttggcctggtggtgttggcttgggacattggagcgttctcctctcaaggtct 158  Q
    ||||||||||||||||| ||||||||||||||||||| ||| || || |||||||||||||||    
T  42281308 acccacttgggttggccaggtggtgttggcttgggaccttgtagtgtgctcctctcaaggtct 42281246  T

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Target: chr4; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 96 - 158
Target Start/End: Original strand, 56409952 - 56410014
Alignment:
Q  96 acccacttgggttggcctggtggtgttggcttgggacattggagcgttctcctctcaaggtct 158  Q
    ||||||||||| |||||||||| |||||||||||||| |||||| || |||||||||||||||    
T  56409952 acccacttgggctggcctggtgctgttggcttgggaccttggagtgtgctcctctcaaggtct 56410014  T

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Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 98 - 150
Target Start/End: Complemental strand, 39030186 - 39030134
Alignment:
Q  98 ccacttgggttggcctggtggtgttggcttgggacattggagcgttctcctct 150  Q
    ||||| ||||||||||||||||||||||||||||| |||||| || |||||||    
T  39030186 ccactggggttggcctggtggtgttggcttgggaccttggagtgtgctcctct 39030134  T

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Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 100 - 158
Target Start/End: Original strand, 37455574 - 37455633
Alignment:
Q  100 acttgggttggcctggtggtgttggcttggga-cattggagcgttctcctctcaaggtct 158  Q
    |||||||||||||||||||||||||||||||| | ||||||  | |||||||||||||||    
T  37455574 acttgggttggcctggtggtgttggcttgggacctttggagtatgctcctctcaaggtct 37455633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 96 - 158
Target Start/End: Original strand, 46295098 - 46295161
Alignment:
Q  96 acccacttgggttggcctggtggtgttggcttgggacattggagcgttctcct-ctcaaggtct 158  Q
    |||||||| |||||| ||||| |||||||||||||||||||||| || ||||| ||||||||||    
T  46295098 acccacttaggttggtctggtagtgttggcttgggacattggagtgtgctcctcctcaaggtct 46295161  T

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Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 96 - 158
Target Start/End: Complemental strand, 25434732 - 25434671
Alignment:
Q  96 acccacttgggttggcctggtggtgttggcttgggacattggagcgttctcctctcaaggtct 158  Q
    ||||| ||||||||||||||||||| ||||||||||| |||||| || || ||||||||||||    
T  25434732 acccaattgggttggcctggtggtg-tggcttgggaccttggagtgtgcttctctcaaggtct 25434671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 96 - 149
Target Start/End: Complemental strand, 19238652 - 19238599
Alignment:
Q  96 acccacttgggttggcctggtggtgttggcttgggacattggagcgttctcctc 149  Q
    |||||||||||||||||||||||| |||||||||||| | |||| || ||||||    
T  19238652 acccacttgggttggcctggtggtattggcttgggacttgggagtgtgctcctc 19238599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 96 - 132
Target Start/End: Complemental strand, 55427275 - 55427239
Alignment:
Q  96 acccacttgggttggcctggtggtgttggcttgggac 132  Q
    |||||||||||||||||||||||| ||||||||||||    
T  55427275 acccacttgggttggcctggtggtattggcttgggac 55427239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 96 - 139
Target Start/End: Original strand, 6606059 - 6606102
Alignment:
Q  96 acccacttgggttggcctggtggtgttggcttgggacattggag 139  Q
    ||||||||||||||| ||| ||||||||||||||||| ||||||    
T  6606059 acccacttgggttggtctgatggtgttggcttgggaccttggag 6606102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 96 - 131
Target Start/End: Complemental strand, 9241100 - 9241065
Alignment:
Q  96 acccacttgggttggcctggtggtgttggcttggga 131  Q
    |||||||||||||||||||||||| |||||||||||    
T  9241100 acccacttgggttggcctggtggtattggcttggga 9241065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 99 - 150
Target Start/End: Original strand, 20832535 - 20832586
Alignment:
Q  99 cacttgggttggcctggtggtgttggcttgggacattggagcgttctcctct 150  Q
    |||||||||||| || |||| ||||||||||||| |||||| ||||||||||    
T  20832535 cacttgggttggtctagtggcgttggcttgggaccttggagtgttctcctct 20832586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 96 - 158
Target Start/End: Complemental strand, 37109426 - 37109363
Alignment:
Q  96 acccacttgggttggcctggtggtgttggcttgggacattggagcgttctcct-ctcaaggtct 158  Q
    |||||||||||||||||| ||||| |||||||||||| | |||| || ||||| ||||||||||    
T  37109426 acccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctcctcaaggtct 37109363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 96 - 131
Target Start/End: Complemental strand, 51250597 - 51250562
Alignment:
Q  96 acccacttgggttggcctggtggtgttggcttggga 131  Q
    |||||||||||||||||||||||| |||||||||||    
T  51250597 acccacttgggttggcctggtggtattggcttggga 51250562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 96 - 161
Target Start/End: Complemental strand, 8325454 - 8325388
Alignment:
Q  96 acccacttgggttggcctggtggtgttggcttgggacattggagcgttctcct-ctcaaggtcttag 161  Q
    ||||||||||||||| | ||||||||||||||| ||| |||||| || ||| | |||||||||||||    
T  8325454 acccacttgggttgggccggtggtgttggcttgagaccttggagtgtgctcatcctcaaggtcttag 8325388  T

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Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 100 - 158
Target Start/End: Complemental strand, 25414285 - 25414227
Alignment:
Q  100 acttgggttggcctggtggtgttggcttgggacattggagcgttctcctctcaaggtct 158  Q
    ||||||||||||||  ||||||||||||| ||| |||||| || |||||||||| ||||    
T  25414285 acttgggttggccttctggtgttggcttgagaccttggagtgtgctcctctcaaagtct 25414227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 100 - 158
Target Start/End: Complemental strand, 32475165 - 32475107
Alignment:
Q  100 acttgggttggcctggtggtgttggcttgggacattggagcgttctcctctcaaggtct 158  Q
    ||||||||||| || ||||||||||||||||||  ||||| |  |||||||||||||||    
T  32475165 acttgggttggtctagtggtgttggcttgggaccctggagtgaactcctctcaaggtct 32475107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 96 - 158
Target Start/End: Complemental strand, 37492791 - 37492730
Alignment:
Q  96 acccacttgggttggcctggtggtgttggcttgggacattggagcgttctcctctcaaggtct 158  Q
    |||| |||||||||||||||| ||||||| ||||||| |||||| ||  ||||||||||||||    
T  37492791 accctcttgggttggcctggtagtgttgg-ttgggaccttggagtgtgatcctctcaaggtct 37492730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 96 - 132
Target Start/End: Complemental strand, 37720289 - 37720253
Alignment:
Q  96 acccacttgggttggcctggtggtgttggcttgggac 132  Q
    |||||||||||||||||||||| | ||||||||||||    
T  37720289 acccacttgggttggcctggtgttattggcttgggac 37720253  T

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Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 96 - 128
Target Start/End: Original strand, 44865335 - 44865367
Alignment:
Q  96 acccacttgggttggcctggtggtgttggcttg 128  Q
    ||||||||||||||||||| |||||||||||||    
T  44865335 acccacttgggttggcctgatggtgttggcttg 44865367  T

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Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 171 - 211
Target Start/End: Complemental strand, 55256190 - 55256150
Alignment:
Q  171 gccaatttcggtgggctagtttgacttcttaaaagaaaaaa 211  Q
    |||||||| |||||||||||||| |||||||||| ||||||    
T  55256190 gccaattttggtgggctagtttggcttcttaaaaaaaaaaa 55256150  T

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Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 96 - 139
Target Start/End: Complemental strand, 55256274 - 55256230
Alignment:
Q  96 acccacttgggttgg-cctggtggtgttggcttgggacattggag 139  Q
    ||||||||||||||| ||||||||| |||||||| ||||||||||    
T  55256274 acccacttgggttgggcctggtggtattggcttgtgacattggag 55256230  T

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Target: chr3 (Bit Score: 50; Significance: 1e-19; HSPs: 23)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 97 - 158
Target Start/End: Complemental strand, 42799821 - 42799760
Alignment:
Q  97 cccacttgggttggcctggtggtgttggcttgggacattggagcgttctcctctcaaggtct 158  Q
    |||||||||||||||||||||||||||||||||||| |||||| || |||||||||||||||    
T  42799821 cccacttgggttggcctggtggtgttggcttgggaccttggagtgtgctcctctcaaggtct 42799760  T

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Target: chr3; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 96 - 161
Target Start/End: Complemental strand, 18316573 - 18316508
Alignment:
Q  96 acccacttgggttggcctggtggtgttggcttgggacattggagcgttctcctctcaaggtcttag 161  Q
    ||||||||||||||| ||||||||| ||||||||||| |||||| || ||||||||||||||||||    
T  18316573 acccacttgggttggtctggtggtgctggcttgggaccttggagtgtgctcctctcaaggtcttag 18316508  T

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Target: chr3; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 96 - 161
Target Start/End: Complemental strand, 53863942 - 53863877
Alignment:
Q  96 acccacttgggttggcctggtggtgttggcttgggacattggagcgttctcctctcaaggtcttag 161  Q
    |||||||||||||| ||||||| |||||||||||||| |||||| || ||||||||||||||||||    
T  53863942 acccacttgggttgtcctggtgatgttggcttgggaccttggagtgtgctcctctcaaggtcttag 53863877  T

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Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 96 - 142
Target Start/End: Original strand, 3054995 - 3055041
Alignment:
Q  96 acccacttgggttggcctggtggtgttggcttgggacattggagcgt 142  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||    
T  3054995 acccacttgggttggcctggtggtgttggcttgggaccttggagcgt 3055041  T

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Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 96 - 197
Target Start/End: Original strand, 42430336 - 42430443
Alignment:
Q  96 acccacttgggttggcctggtggtgttggcttgggacattggagcgttctcctctcaaggtcttag-------ctccccaaagccaatttcggtgggcta 188  Q
    |||||||||||||||| ||||||| ||| |||||||  |||||| || ||||||||||||||||||       |||||||| ||||||||||| ||||||    
T  42430336 acccacttgggttggc-tggtggtattgacttgggatcttggagtgtgctcctctcaaggtcttagttcgattctccccaatgccaatttcggggggcta 42430434  T
Q  189 gtttgactt 197  Q
    |||||||||    
T  42430435 gtttgactt 42430443  T

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Target: chr3; HSP #6
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 96 - 149
Target Start/End: Complemental strand, 26871579 - 26871526
Alignment:
Q  96 acccacttgggttggcctggtggtgttggcttgggacattggagcgttctcctc 149  Q
    ||||||||||||||||||||||||||||||||||||| ||||||  ||||||||    
T  26871579 acccacttgggttggcctggtggtgttggcttgggaccttggagttttctcctc 26871526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 98 - 158
Target Start/End: Original strand, 15034348 - 15034408
Alignment:
Q  98 ccacttgggttggcctggtggtgttggcttgggacattggagcgttctcctctcaaggtct 158  Q
    |||||||||||||||||||||||||| |||||||| |||||| ||  ||||||||||||||    
T  15034348 ccacttgggttggcctggtggtgttgccttgggaccttggagggtgatcctctcaaggtct 15034408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 96 - 158
Target Start/End: Complemental strand, 35623344 - 35623279
Alignment:
Q  96 acccacttgggttggcctggt---ggtgttggcttgggacattggagcgttctcctctcaaggtct 158  Q
    |||||||||||||||||||||   |||||||||||||||| |||||| || |||||||||||||||    
T  35623344 acccacttgggttggcctggttgtggtgttggcttgggaccttggagtgtgctcctctcaaggtct 35623279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 96 - 158
Target Start/End: Complemental strand, 11092244 - 11092182
Alignment:
Q  96 acccacttgggttggcctggtggtgttggcttgggacattggagcgttctcctctcaaggtct 158  Q
    |||||||||||||||||| |||||||||||||||||| ||| || || || ||||||||||||    
T  11092244 acccacttgggttggcctagtggtgttggcttgggaccttgtagtgtgctactctcaaggtct 11092182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 96 - 158
Target Start/End: Original strand, 34844372 - 34844434
Alignment:
Q  96 acccacttgggttggcctggtggtgttggcttgggacattggagcgttctcctctcaaggtct 158  Q
    |||||||||||||| ||||||| |||||||||| ||| |||||| || |||||||||||||||    
T  34844372 acccacttgggttgccctggtgttgttggcttgagaccttggagtgtgctcctctcaaggtct 34844434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 96 - 158
Target Start/End: Original strand, 40268490 - 40268552
Alignment:
Q  96 acccacttgggttggcctggtggtgttggcttgggacattggagcgttctcctctcaaggtct 158  Q
    ||||||||||||| ||||||||||||||||||||||| |||||| |  ||||||| |||||||    
T  40268490 acccacttgggtttgcctggtggtgttggcttgggaccttggagtgggctcctcttaaggtct 40268552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 96 - 158
Target Start/End: Original strand, 43303759 - 43303821
Alignment:
Q  96 acccacttgggttggcctggtggtgttggcttgggacattggagcgttctcctctcaaggtct 158  Q
    ||||| ||||||||||||||||||| ||||||| ||| ||||||||| |||||||| ||||||    
T  43303759 acccatttgggttggcctggtggtgatggcttgagaccttggagcgtgctcctctccaggtct 43303821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 96 - 158
Target Start/End: Original strand, 24478156 - 24478218
Alignment:
Q  96 acccacttgggttggcctggtggtgttggcttgggacattggagcgttctcctctcaaggtct 158  Q
    |||||||||||||||  ||||||| ||||||||| || ||| || ||||||||||||||||||    
T  24478156 acccacttgggttggtttggtggtattggcttggtactttgaagtgttctcctctcaaggtct 24478218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 96 - 158
Target Start/End: Original strand, 40777015 - 40777076
Alignment:
Q  96 acccacttgggttggcctggtggtgttggcttgggacattggagcgttctcctctcaaggtct 158  Q
    ||||||||||||||  |||||||||||| | ||||||||||||| || |||||||||||||||    
T  40777015 acccacttgggttgatctggtggtgttg-catgggacattggagtgtgctcctctcaaggtct 40777076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 96 - 161
Target Start/End: Original strand, 47079702 - 47079767
Alignment:
Q  96 acccacttgggttggcctggtggtgttggcttgggacattggagcgttctcctctcaaggtcttag 161  Q
    ||||||||||||||| ||||||||||||||||||||  |||||  ||  |||||| ||||||||||    
T  47079702 acccacttgggttggtctggtggtgttggcttgggatcttggaatgtgttcctcttaaggtcttag 47079767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 96 - 132
Target Start/End: Original strand, 8051215 - 8051251
Alignment:
Q  96 acccacttgggttggcctggtggtgttggcttgggac 132  Q
    |||||||||||||||||||||||| ||||||||||||    
T  8051215 acccacttgggttggcctggtggtattggcttgggac 8051251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 96 - 131
Target Start/End: Complemental strand, 10499184 - 10499149
Alignment:
Q  96 acccacttgggttggcctggtggtgttggcttggga 131  Q
    |||||||||||||||||||||||| |||||||||||    
T  10499184 acccacttgggttggcctggtggtattggcttggga 10499149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 96 - 138
Target Start/End: Original strand, 24459991 - 24460033
Alignment:
Q  96 acccacttgggttggcctggtggtgttggcttgggacattgga 138  Q
    |||||||||||||||||||||||| ||||||||| || |||||    
T  24459991 acccacttgggttggcctggtggtattggcttggtactttgga 24460033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 96 - 138
Target Start/End: Original strand, 25925534 - 25925576
Alignment:
Q  96 acccacttgggttggcctggtggtgttggcttgggacattgga 138  Q
    ||||||||| |||||| |||||||||||||||||||| |||||    
T  25925534 acccacttgagttggcatggtggtgttggcttgggactttgga 25925576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 96 - 134
Target Start/End: Complemental strand, 27923118 - 27923080
Alignment:
Q  96 acccacttgggttggcctggtggtgttggcttgggacat 134  Q
    |||||||| ||||||||||||||| ||||||||||||||    
T  27923118 acccacttaggttggcctggtggtattggcttgggacat 27923080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 96 - 149
Target Start/End: Original strand, 36720382 - 36720435
Alignment:
Q  96 acccacttgggttggcctggtggtgttggcttgggacattggagcgttctcctc 149  Q
    ||||||||||||||| |||||||| ||||||||||| || |||| || ||||||    
T  36720382 acccacttgggttggtctggtggtattggcttgggatatgggagtgtgctcctc 36720435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 96 - 132
Target Start/End: Original strand, 7207611 - 7207647
Alignment:
Q  96 acccacttgggttggcctggtggtgttggcttgggac 132  Q
    |||||||||||||||| ||||||||||| ||||||||    
T  7207611 acccacttgggttggcttggtggtgttgccttgggac 7207647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 96 - 132
Target Start/End: Original strand, 9832498 - 9832534
Alignment:
Q  96 acccacttgggttggcctggtggtgttggcttgggac 132  Q
    ||||||||||||||||| |||||| ||||||||||||    
T  9832498 acccacttgggttggcccggtggtattggcttgggac 9832534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 47; Significance: 8e-18; HSPs: 20)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 96 - 158
Target Start/End: Complemental strand, 22269008 - 22268946
Alignment:
Q  96 acccacttgggttggcctggtggtgttggcttgggacattggagcgttctcctctcaaggtct 158  Q
    ||||||||||||||||||||||||||||||||||||| |||||| || ||| |||||||||||    
T  22269008 acccacttgggttggcctggtggtgttggcttgggaccttggagtgtgctcttctcaaggtct 22268946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 96 - 158
Target Start/End: Original strand, 26688866 - 26688929
Alignment:
Q  96 acccacttgggttggcctggtggtgttggcttgggacattggagcgttctcct-ctcaaggtct 158  Q
    ||||||||||||||||||||||||||||||||||||| |||||| || ||||| ||||||||||    
T  26688866 acccacttgggttggcctggtggtgttggcttgggaccttggagtgtgctcctcctcaaggtct 26688929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 96 - 158
Target Start/End: Original strand, 6530808 - 6530870
Alignment:
Q  96 acccacttgggttggcctggtggtgttggcttgggacattggagcgttctcctctcaaggtct 158  Q
    ||||||||||||||||||||||||||||||||||||| | |||| || |||||||||| ||||    
T  6530808 acccacttgggttggcctggtggtgttggcttgggacctaggagtgtgctcctctcaatgtct 6530870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 96 - 161
Target Start/End: Complemental strand, 11793596 - 11793530
Alignment:
Q  96 acccacttgggttggcctggtggtgttggcttgggacattggagcgttctcct-ctcaaggtcttag 161  Q
    ||||||||||||||| || |||||||| ||||||||| |||||| || ||||| |||||||||||||    
T  11793596 acccacttgggttggtcttgtggtgttcgcttgggaccttggagtgtgctcctcctcaaggtcttag 11793530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 96 - 158
Target Start/End: Original strand, 34778736 - 34778798
Alignment:
Q  96 acccacttgggttggcctggtggtgttggcttgggacattggagcgttctcctctcaaggtct 158  Q
    ||||||||||||| ||||||||||||||||||| ||| ||| || || ||||| |||||||||    
T  34778736 acccacttgggtttgcctggtggtgttggcttgagaccttgcagtgtgctcctttcaaggtct 34778798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 96 - 156
Target Start/End: Original strand, 29206346 - 29206406
Alignment:
Q  96 acccacttgggttggcctggtggtgttggcttgggacattggagcgttctcctctcaaggt 156  Q
    ||||||| |||||||||||||||||| ||||||| || |||| | || |||||||||||||    
T  29206346 acccactagggttggcctggtggtgtgggcttggtaccttggggtgtgctcctctcaaggt 29206406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 96 - 158
Target Start/End: Original strand, 18897167 - 18897230
Alignment:
Q  96 acccacttgggttggcctggtggtgttggcttgggacattggagcgttctcct-ctcaaggtct 158  Q
    |||||||||||||||||| |||||||||| ||||||| || ||| || ||||| ||||||||||    
T  18897167 acccacttgggttggcctagtggtgttggtttgggaccttagagtgtgctcctcctcaaggtct 18897230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 97 - 158
Target Start/End: Original strand, 2203494 - 2203556
Alignment:
Q  97 cccacttgggttggcctggtggtgttggcttgggacattggagcgttctcct-ctcaaggtct 158  Q
    ||||||||||||||||| ||||| |||||||||||| | |||| || ||||| ||||||||||    
T  2203494 cccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctcctcaaggtct 2203556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 97 - 158
Target Start/End: Original strand, 3624582 - 3624644
Alignment:
Q  97 cccacttgggttggcctggtggtgttggcttgggacattggagcgttctcctc-tcaaggtct 158  Q
    ||||||||||||||||| ||||| |||||||||||| | |||| || |||||| |||||||||    
T  3624582 cccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctcttcaaggtct 3624644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 96 - 149
Target Start/End: Original strand, 968363 - 968416
Alignment:
Q  96 acccacttgggttggcctggtggtgttggcttgggacattggagcgttctcctc 149  Q
    ||||||||| |||||||||||||| |||||||||||| | |||| || ||||||    
T  968363 acccacttgagttggcctggtggtattggcttgggacctgggagtgtgctcctc 968416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 96 - 149
Target Start/End: Complemental strand, 6436630 - 6436577
Alignment:
Q  96 acccacttgggttggcctggtggtgttggcttgggacattggagcgttctcctc 149  Q
    |||||||||||||| ||||||||| |||||||||||| | |||| || ||||||    
T  6436630 acccacttgggttgccctggtggtattggcttgggacttaggagtgtgctcctc 6436577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 96 - 149
Target Start/End: Original strand, 16852341 - 16852394
Alignment:
Q  96 acccacttgggttggcctggtggtgttggcttgggacattggagcgttctcctc 149  Q
    |||||||||||||||||| ||||| |||||||||||| | |||| || ||||||    
T  16852341 acccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctc 16852394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 96 - 149
Target Start/End: Original strand, 29431012 - 29431065
Alignment:
Q  96 acccacttgggttggcctggtggtgttggcttgggacattggagcgttctcctc 149  Q
    |||||||||||||||||||| ||| |||||||||||| | |||| || ||||||    
T  29431012 acccacttgggttggcctggcggtattggcttgggacttgggagtgtgctcctc 29431065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 95 - 132
Target Start/End: Complemental strand, 29858125 - 29858088
Alignment:
Q  95 cacccacttgggttggcctggtggtgttggcttgggac 132  Q
    ||||||||||| ||||||||||||| ||||||||||||    
T  29858125 cacccacttggattggcctggtggtattggcttgggac 29858088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 96 - 149
Target Start/End: Original strand, 35287717 - 35287770
Alignment:
Q  96 acccacttgggttggcctggtggtgttggcttgggacattggagcgttctcctc 149  Q
    |||||||||||| |||||||||||||||||||| ||  |||||| || ||||||    
T  35287717 acccacttgggtaggcctggtggtgttggcttgagattttggagtgtgctcctc 35287770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 96 - 132
Target Start/End: Original strand, 8485000 - 8485036
Alignment:
Q  96 acccacttgggttggcctggtggtgttggcttgggac 132  Q
    |||||||||||||||||||||||| || |||||||||    
T  8485000 acccacttgggttggcctggtggtatttgcttgggac 8485036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 96 - 132
Target Start/End: Original strand, 18540299 - 18540335
Alignment:
Q  96 acccacttgggttggcctggtggtgttggcttgggac 132  Q
    |||||||||||||||||| ||||| ||||||||||||    
T  18540299 acccacttgggttggcctagtggtattggcttgggac 18540335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 96 - 132
Target Start/End: Complemental strand, 19703562 - 19703526
Alignment:
Q  96 acccacttgggttggcctggtggtgttggcttgggac 132  Q
    |||||||||||||||||| ||||| ||||||||||||    
T  19703562 acccacttgggttggcctagtggtattggcttgggac 19703526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 96 - 132
Target Start/End: Complemental strand, 23874457 - 23874421
Alignment:
Q  96 acccacttgggttggcctggtggtgttggcttgggac 132  Q
    |||||||||||||||||| ||||| ||||||||||||    
T  23874457 acccacttgggttggcctagtggtattggcttgggac 23874421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 118 - 158
Target Start/End: Complemental strand, 40137015 - 40136975
Alignment:
Q  118 gtgttggcttgggacattggagcgttctcctctcaaggtct 158  Q
    ||||||||||||||| |||||| || |||||||||||||||    
T  40137015 gtgttggcttgggaccttggagtgtgctcctctcaaggtct 40136975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 47; Significance: 8e-18; HSPs: 23)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 96 - 158
Target Start/End: Complemental strand, 15581216 - 15581154
Alignment:
Q  96 acccacttgggttggcctggtggtgttggcttgggacattggagcgttctcctctcaaggtct 158  Q
    ||||||||||||||||||||||||||||||||||||| |||||| || ||||||| |||||||    
T  15581216 acccacttgggttggcctggtggtgttggcttgggaccttggagtgtgctcctctaaaggtct 15581154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 96 - 158
Target Start/End: Original strand, 37046986 - 37047048
Alignment:
Q  96 acccacttgggttggcctggtggtgttggcttgggacattggagcgttctcctctcaaggtct 158  Q
    ||||||||||||||| ||||||||||||||||||||| |||||| || |||||||||||||||    
T  37046986 acccacttgggttggtctggtggtgttggcttgggaccttggagtgtgctcctctcaaggtct 37047048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 96 - 161
Target Start/End: Original strand, 39012292 - 39012357
Alignment:
Q  96 acccacttgggttggcctggtggtgttggcttgggacattggagcgttctcctctcaaggtcttag 161  Q
    |||||||| ||||||||| |||||||||||||||||| |||||| || ||| ||||||||||||||    
T  39012292 acccactttggttggcctagtggtgttggcttgggaccttggagtgtgctcttctcaaggtcttag 39012357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 101 - 158
Target Start/End: Original strand, 48400178 - 48400235
Alignment:
Q  101 cttgggttggcctggtggtgttggcttgggacattggagcgttctcctctcaaggtct 158  Q
    |||||||||||||| |||| |||||||||||| ||||||||  |||||||||||||||    
T  48400178 cttgggttggcctgatggtattggcttgggaccttggagcgcactcctctcaaggtct 48400235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 106 - 158
Target Start/End: Complemental strand, 6128051 - 6127999
Alignment:
Q  106 gttggcctggtggtgttggcttgggacattggagcgttctcctctcaaggtct 158  Q
    ||||| ||||||||||||| ||||||| ||||||||| |||||||||||||||    
T  6128051 gttggtctggtggtgttggtttgggaccttggagcgtgctcctctcaaggtct 6127999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 96 - 139
Target Start/End: Complemental strand, 24857905 - 24857862
Alignment:
Q  96 acccacttgggttggcctggtggtgttggcttgggacattggag 139  Q
    ||||||||||||||||||||||||||||||| ||||| ||||||    
T  24857905 acccacttgggttggcctggtggtgttggctagggaccttggag 24857862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 96 - 158
Target Start/End: Original strand, 34228875 - 34228937
Alignment:
Q  96 acccacttgggttggcctggtggtgttggcttgggacattggagcgttctcctctcaaggtct 158  Q
    ||||||||| ||||| ||||||||||||||||||||| | |||| ||  ||||||||||||||    
T  34228875 acccacttgagttggtctggtggtgttggcttgggacctcggagtgtgttcctctcaaggtct 34228937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 96 - 158
Target Start/End: Complemental strand, 39714853 - 39714791
Alignment:
Q  96 acccacttgggttggcctggtggtgttggcttgggacattggagcgttctcctctcaaggtct 158  Q
    |||||||||||||||| | |||| ||||||||||||  |||||| || |||||||||||||||    
T  39714853 acccacttgggttggcatagtggcgttggcttgggatcttggagtgtgctcctctcaaggtct 39714791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 99 - 158
Target Start/End: Original strand, 4824975 - 4825035
Alignment:
Q  99 cacttgggttggcctggtggtgttggcttgggacattggagcgttctcctc-tcaaggtct 158  Q
    |||||||||||| ||| ||||||||||||||||| |||||| || |||||| |||||||||    
T  4824975 cacttgggttggtctgatggtgttggcttgggaccttggagtgtgctcctcttcaaggtct 4825035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 102 - 158
Target Start/End: Original strand, 39964512 - 39964568
Alignment:
Q  102 ttgggttggcctggtggtgttggcttgggacattggagcgttctcctctcaaggtct 158  Q
    |||||||||||| | |||||||||||| ||| |||||| || |||||||||||||||    
T  39964512 ttgggttggcctagaggtgttggcttgcgaccttggagtgtgctcctctcaaggtct 39964568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 98 - 158
Target Start/End: Complemental strand, 44486230 - 44486170
Alignment:
Q  98 ccacttgggttggcctggtggtgttggcttgggacattggagcgttctcctctcaaggtct 158  Q
    |||||||| ||||||| |||||||||| |||| || |||||| || |||||||||||||||    
T  44486230 ccacttggattggcctagtggtgttggtttggaaccttggagtgtgctcctctcaaggtct 44486170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 96 - 160
Target Start/End: Complemental strand, 49101843 - 49101779
Alignment:
Q  96 acccacttgggttggcctggtggtgttggcttgggacattggagcgttctcctctcaaggtctta 160  Q
    ||||| |||||||||||| ||| |||||||||  ||| |||||| || |||||||||||||||||    
T  49101843 acccatttgggttggcctagtgttgttggcttcagaccttggagtgtgctcctctcaaggtctta 49101779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 96 - 131
Target Start/End: Complemental strand, 19528402 - 19528367
Alignment:
Q  96 acccacttgggttggcctggtggtgttggcttggga 131  Q
    |||||||||||||||||||||||| |||||||||||    
T  19528402 acccacttgggttggcctggtggtattggcttggga 19528367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 96 - 158
Target Start/End: Complemental strand, 31794339 - 31794276
Alignment:
Q  96 acccacttgggttggcctggtggtgttggcttgggacattggagcgttctcct-ctcaaggtct 158  Q
    |||||||||||||||||| ||||| |||||||||||| | |||| || ||||| ||||||||||    
T  31794339 acccacttgggttggcctagtggtattggcttgggacttgggagtgtgctcctcctcaaggtct 31794276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 91 - 149
Target Start/End: Complemental strand, 9165275 - 9165217
Alignment:
Q  91 tcatcacccacttgggttggcctggtggtgttggcttgggacattggagcgttctcctc 149  Q
    |||| |||||||||||||||||| ||||| |||||||||||| | |||| || ||||||    
T  9165275 tcataacccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctc 9165217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 96 - 158
Target Start/End: Original strand, 19480528 - 19480590
Alignment:
Q  96 acccacttgggttggcctggtggtgttggcttgggacattggagcgttctcctctcaaggtct 158  Q
    ||||| ||||||||||||  |||||||| |||||||  |||||| || |||||||||||||||    
T  19480528 acccatttgggttggccttatggtgttgacttgggatcttggagtgtgctcctctcaaggtct 19480590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 120 - 211
Target Start/End: Original strand, 38939227 - 38939326
Alignment:
Q  120 gttggcttgggacattggagcgttctcctctcaaggtcttag--------ctccccaaagccaatttcggtgggctagtttgacttcttaaaagaaaaaa 211  Q
    ||||||||||||| |||||| || |||||||||||||||  |        |||||||| | ||||||||||||||||||||| |||||| ||| ||||||    
T  38939227 gttggcttgggaccttggagtgtgctcctctcaaggtctctggtttgattctccccaatgtcaatttcggtgggctagtttggcttcttcaaaaaaaaaa 38939326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 104 - 158
Target Start/End: Complemental strand, 41470677 - 41470623
Alignment:
Q  104 gggttggcctggtggtgttggcttgggacattggagcgttctcctctcaaggtct 158  Q
    ||||||||| ||||||||||||||| ||| ||||||  | |||||||||||||||    
T  41470677 gggttggcccggtggtgttggcttgagaccttggagtatgctcctctcaaggtct 41470623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 96 - 149
Target Start/End: Complemental strand, 19940947 - 19940894
Alignment:
Q  96 acccacttgggttggcctggtggtgttggcttgggacattggagcgttctcctc 149  Q
    ||||||||||||||| ||||||||||| ||||||| | |||||| || ||||||    
T  19940947 acccacttgggttggtctggtggtgttagcttgggtccttggagtgtgctcctc 19940894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 100 - 149
Target Start/End: Complemental strand, 21547551 - 21547502
Alignment:
Q  100 acttgggttggcctggtggtgttggcttgggacattggagcgttctcctc 149  Q
    |||||||||||||| ||||| |||||||||||||| |||| || ||||||    
T  21547551 acttgggttggcctagtggtattggcttgggacatgggagggtgctcctc 21547502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 96 - 149
Target Start/End: Original strand, 40257400 - 40257453
Alignment:
Q  96 acccacttgggttggcctggtggtgttggcttgggacattggagcgttctcctc 149  Q
    |||||||||||||||||||||||| |||||||| ||| | |||| || ||||||    
T  40257400 acccacttgggttggcctggtggtattggcttgagacctgggagtgtgctcctc 40257453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 96 - 149
Target Start/End: Complemental strand, 52116856 - 52116803
Alignment:
Q  96 acccacttgggttggcctggtggtgttggcttgggacattggagcgttctcctc 149  Q
    ||||| |||||||||||||||||| |||||||||||| | |||| || ||||||    
T  52116856 acccagttgggttggcctggtggtattggcttgggacttgggagtgtgctcctc 52116803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 96 - 132
Target Start/End: Original strand, 952512 - 952548
Alignment:
Q  96 acccacttgggttggcctggtggtgttggcttgggac 132  Q
    ||||||||| ||||| |||||||||||||||||||||    
T  952512 acccacttgagttggtctggtggtgttggcttgggac 952548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 25)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 96 - 161
Target Start/End: Complemental strand, 5273665 - 5273599
Alignment:
Q  96 acccacttgggttggcctggtggtgttggcttgggacattggagcgttctcct-ctcaaggtcttag 161  Q
    ||||||||||||||||||||||||||||||||||||| || ||| || ||||| |||||||||||||    
T  5273665 acccacttgggttggcctggtggtgttggcttgggaccttagagtgtgctcctcctcaaggtcttag 5273599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 96 - 161
Target Start/End: Complemental strand, 25956367 - 25956302
Alignment:
Q  96 acccacttgggttggcctggtggtgttggcttgggacattggagcgttctcctctcaaggtcttag 161  Q
    ||||| |||||||||||| ||||| |||||||||||| |||||| || ||||||||||||||||||    
T  25956367 acccatttgggttggcctagtggtattggcttgggaccttggagtgtgctcctctcaaggtcttag 25956302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 96 - 158
Target Start/End: Complemental strand, 5579309 - 5579246
Alignment:
Q  96 acccacttgggttggcctggtggtgttggcttgggacattggagcgttctcct-ctcaaggtct 158  Q
    |||||||||||||| |||||||||||||||||||||| |||||| || ||||| ||||||||||    
T  5579309 acccacttgggttgacctggtggtgttggcttgggaccttggagtgtgctcctcctcaaggtct 5579246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 96 - 161
Target Start/End: Complemental strand, 38374674 - 38374608
Alignment:
Q  96 acccacttgggttggcctggtggtgttggcttgggacattggagcgttctcct-ctcaaggtcttag 161  Q
    |||||||||||||||| |||||||||||||||||||| || ||| || ||||| |||||||||||||    
T  38374674 acccacttgggttggcgtggtggtgttggcttgggaccttagagtgtgctcctcctcaaggtcttag 38374608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 96 - 158
Target Start/End: Complemental strand, 48125249 - 48125187
Alignment:
Q  96 acccacttgggttggcctggtggtgttggcttgggacattggagcgttctcctctcaaggtct 158  Q
    ||||||||||||||| ||||||||||||||||||||| |||||| || ||||||  |||||||    
T  48125249 acccacttgggttggtctggtggtgttggcttgggaccttggagtgtgctcctccgaaggtct 48125187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 96 - 161
Target Start/End: Complemental strand, 35328949 - 35328884
Alignment:
Q  96 acccacttgggttggcctggtggtgttggcttgggacattggagcgttctcctctcaaggtcttag 161  Q
    |||||||||||||||||||||||||||||||||| || || ||| || || |||||||||| ||||    
T  35328949 acccacttgggttggcctggtggtgttggcttggaaccttcgagtgtgcttctctcaaggttttag 35328884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 96 - 149
Target Start/End: Original strand, 41487363 - 41487416
Alignment:
Q  96 acccacttgggttggcctggtggtgttggcttgggacattggagcgttctcctc 149  Q
    |||||||||||||||||||||||| |||||||||||| | |||| |||||||||    
T  41487363 acccacttgggttggcctggtggtattggcttgggacttgggagtgttctcctc 41487416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 96 - 139
Target Start/End: Complemental strand, 6426127 - 6426084
Alignment:
Q  96 acccacttgggttggcctggtggtgttggcttgggacattggag 139  Q
    ||||||||||||||||||||||||||||||||||| | ||||||    
T  6426127 acccacttgggttggcctggtggtgttggcttgggtctttggag 6426084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 96 - 158
Target Start/End: Original strand, 31835193 - 31835256
Alignment:
Q  96 acccacttgggttggcctggtggtgttggcttgggacattggagcgttctcct-ctcaaggtct 158  Q
    |||||||||||||||||||||||||||||||||||   |||||| || ||||| ||||||||||    
T  31835193 acccacttgggttggcctggtggtgttggcttgggtgcttggagtgtgctcctcctcaaggtct 31835256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 102 - 210
Target Start/End: Original strand, 12877160 - 12877265
Alignment:
Q  102 ttgggttggcctggtggtgttggcttgggacattggagcgttctcctctcaaggtcttagctccccaaagccaatttcggtgggctagtttgacttctta 201  Q
    |||||| ||||| ||||| |||||||||||| ||||||  | |||||||||| |||| |||   |    ||||||||||||||||||||||| |||||||    
T  12877160 ttgggtcggcctagtggttttggcttgggaccttggagtttgctcctctcaatgtctcagc---caggtgccaatttcggtgggctagtttggcttctta 12877256  T
Q  202 aaagaaaaa 210  Q
    ||| |||||    
T  12877257 aaaaaaaaa 12877265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 97 - 158
Target Start/End: Complemental strand, 29385817 - 29385755
Alignment:
Q  97 cccacttgggttggcctggtggtgttggcttgggacattggagcgttctcct-ctcaaggtct 158  Q
    |||||||||||||||| | ||||||||||||||||| |||||| || ||||| ||||||||||    
T  29385817 cccacttgggttggccggatggtgttggcttgggactttggagtgtgctcctcctcaaggtct 29385755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 96 - 209
Target Start/End: Original strand, 45559201 - 45559314
Alignment:
Q  96 acccacttgggttggcctggtggtgttggcttgggacattggagcgttctcctctcaaggtcttagctccccaaagccaatttcggtgggctagtttgac 195  Q
    |||||||||||||||||| ||||| ||||||||| || |||||| || ||| ||||||| ||    ||||||   |||||||| |||||| || ||||||    
T  45559201 acccacttgggttggcctagtggtattggcttggaaccttggagtgtgctcatctcaagttcgattctccccggtgccaattttggtgggttaatttgac 45559300  T
Q  196 ttcttaaaagaaaa 209  Q
    ||||| ||| ||||    
T  45559301 ttcttcaaaaaaaa 45559314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 97 - 149
Target Start/End: Complemental strand, 44628257 - 44628205
Alignment:
Q  97 cccacttgggttggcctggtggtgttggcttgggacattggagcgttctcctc 149  Q
    ||||||||||||||||||||| |||| ||||||||| |||||| || ||||||    
T  44628257 cccacttgggttggcctggtgttgttagcttgggaccttggagtgtgctcctc 44628205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 96 - 128
Target Start/End: Complemental strand, 48039722 - 48039690
Alignment:
Q  96 acccacttgggttggcctggtggtgttggcttg 128  Q
    |||||||||||||||||||||||||||||||||    
T  48039722 acccacttgggttggcctggtggtgttggcttg 48039690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 96 - 158
Target Start/End: Complemental strand, 26459485 - 26459422
Alignment:
Q  96 acccacttgggttggcctggtggtgttggcttgggacattggagcgttctcct-ctcaaggtct 158  Q
    |||||||||||||||||| ||||| |||||||||||| | |||| || ||||| ||||||||||    
T  26459485 acccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctcctcaaggtct 26459422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 173 - 211
Target Start/End: Original strand, 5257795 - 5257833
Alignment:
Q  173 caatttcggtgggctagtttgacttcttaaaagaaaaaa 211  Q
    |||||||||||| ||||||||||||||||||| ||||||    
T  5257795 caatttcggtggactagtttgacttcttaaaaaaaaaaa 5257833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 96 - 149
Target Start/End: Complemental strand, 23301677 - 23301624
Alignment:
Q  96 acccacttgggttggcctggtggtgttggcttgggacattggagcgttctcctc 149  Q
    |||||||||||||||||||||||| ||| |||||||| | |||| || ||||||    
T  23301677 acccacttgggttggcctggtggtattgacttgggacttgggagtgtgctcctc 23301624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 96 - 149
Target Start/End: Complemental strand, 25021410 - 25021357
Alignment:
Q  96 acccacttgggttggcctggtggtgttggcttgggacattggagcgttctcctc 149  Q
    |||||||||||||||||| ||||| |||||||||||| | |||| || ||||||    
T  25021410 acccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctc 25021357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 96 - 149
Target Start/End: Original strand, 43590908 - 43590961
Alignment:
Q  96 acccacttgggttggcctggtggtgttggcttgggacattggagcgttctcctc 149  Q
    ||||| |||||||||||||||||| |||||||||||| | |||| || ||||||    
T  43590908 acccagttgggttggcctggtggtattggcttgggacttgggagtgtgctcctc 43590961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 96 - 128
Target Start/End: Original strand, 30579336 - 30579368
Alignment:
Q  96 acccacttgggttggcctggtggtgttggcttg 128  Q
    |||||||||||||||||||||||| ||||||||    
T  30579336 acccacttgggttggcctggtggtattggcttg 30579368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 96 - 132
Target Start/End: Complemental strand, 39499794 - 39499758
Alignment:
Q  96 acccacttgggttggcctggtggtgttggcttgggac 132  Q
    |||||||||||||||||| ||||| ||||||||||||    
T  39499794 acccacttgggttggcctagtggtattggcttgggac 39499758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 96 - 132
Target Start/End: Original strand, 39631845 - 39631881
Alignment:
Q  96 acccacttgggttggcctggtggtgttggcttgggac 132  Q
    |||||||||||||||||| ||||| ||||||||||||    
T  39631845 acccacttgggttggcctagtggtattggcttgggac 39631881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 96 - 132
Target Start/End: Complemental strand, 42836076 - 42836040
Alignment:
Q  96 acccacttgggttggcctggtggtgttggcttgggac 132  Q
    |||||||||||||||||| ||||| ||||||||||||    
T  42836076 acccacttgggttggcctagtggtattggcttgggac 42836040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 99 - 139
Target Start/End: Complemental strand, 44146623 - 44146583
Alignment:
Q  99 cacttgggttggcctggtggtgttggcttgggacattggag 139  Q
    ||||||||||||||| |||||||||| ||||||| ||||||    
T  44146623 cacttgggttggcctagtggtgttggtttgggaccttggag 44146583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 96 - 132
Target Start/End: Original strand, 46531358 - 46531394
Alignment:
Q  96 acccacttgggttggcctggtggtgttggcttgggac 132  Q
    |||||||||||||||||||||||||| | ||||||||    
T  46531358 acccacttgggttggcctggtggtgtcgtcttgggac 46531394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 10)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 96 - 161
Target Start/End: Complemental strand, 31669099 - 31669034
Alignment:
Q  96 acccacttgggttggcctggtggtgttggcttgggacattggagcgttctcctctcaaggtcttag 161  Q
    ||||||||||||||| ||| ||||||||||||||||| ||||||  | ||||||||||||||||||    
T  31669099 acccacttgggttggtctgatggtgttggcttgggaccttggagtctgctcctctcaaggtcttag 31669034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 98 - 158
Target Start/End: Complemental strand, 16173056 - 16172996
Alignment:
Q  98 ccacttgggttggcctggtggtgttggcttgggacattggagcgttctcctctcaaggtct 158  Q
    ||||||||||||||||||| ||||||||||| ||| |||||| || |||||||||||||||    
T  16173056 ccacttgggttggcctggtagtgttggcttgagaccttggagtgtgctcctctcaaggtct 16172996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 96 - 161
Target Start/End: Original strand, 19373240 - 19373305
Alignment:
Q  96 acccacttgggttggcctggtggtgttggcttgggacattggagcgttctcctctcaaggtcttag 161  Q
    ||||||||| ||||||||||||||||||||||| ||| |||||| || || |||||||||| ||||    
T  19373240 acccacttgagttggcctggtggtgttggcttgagaccttggagtgtgctactctcaaggttttag 19373305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 96 - 158
Target Start/End: Original strand, 16457811 - 16457874
Alignment:
Q  96 acccacttgggttggcctggtggtgttggcttgggacattggagcgttctcct-ctcaaggtct 158  Q
    |||||||| ||||||||||||||| |||||||||||| |||||| || ||||| ||||||||||    
T  16457811 acccacttaggttggcctggtggtattggcttgggaccttggagtgtgctcctcctcaaggtct 16457874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 96 - 132
Target Start/End: Original strand, 21589289 - 21589325
Alignment:
Q  96 acccacttgggttggcctggtggtgttggcttgggac 132  Q
    |||||||||||||||||||||||| ||||||||||||    
T  21589289 acccacttgggttggcctggtggtattggcttgggac 21589325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 96 - 150
Target Start/End: Complemental strand, 18989076 - 18989022
Alignment:
Q  96 acccacttgggttggcctggtggtgttggcttgggacattggagcgttctcctct 150  Q
    ||||||||||||| || || ||||||||||||||||| |||||| || |||||||    
T  18989076 acccacttgggtttgcatgatggtgttggcttgggaccttggagtgtgctcctct 18989022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 97 - 158
Target Start/End: Complemental strand, 14656717 - 14656656
Alignment:
Q  97 cccacttgggttggcctggtggtgttggcttgggacattggagcgttctcctctcaaggtct 158  Q
    |||||| |||||| |||||| ||||||||||| ||| ||||||  | |||||||||||||||    
T  14656717 cccactagggttgacctggttgtgttggcttgagaccttggagtttgctcctctcaaggtct 14656656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 96 - 149
Target Start/End: Complemental strand, 21549212 - 21549159
Alignment:
Q  96 acccacttgggttggcctggtggtgttggcttgggacattggagcgttctcctc 149  Q
    |||||||||||||||||| ||||| |||||||||||| | |||| || ||||||    
T  21549212 acccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctc 21549159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 96 - 161
Target Start/End: Complemental strand, 32340411 - 32340346
Alignment:
Q  96 acccacttgggttggcctggtggtgttggcttgggacattggagcgttctcctctcaaggtcttag 161  Q
    |||||| |||||||| || |||| |  |||||||||| |||||| || ||||||||||||||||||    
T  32340411 acccacatgggttggtcttgtggggcaggcttgggaccttggagtgtgctcctctcaaggtcttag 32340346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 99 - 158
Target Start/End: Original strand, 16436622 - 16436681
Alignment:
Q  99 cacttgggttggcctggtggtgttggcttgggacattggagcgttctcct-ctcaaggtct 158  Q
    ||||||||||||||| ||||| |||||||||||| |||||| || ||||| ||||||||||    
T  16436622 cacttgggttggcctagtggtattggcttgggac-ttggagtgtgctcctcctcaaggtct 16436681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 19)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 96 - 159
Target Start/End: Original strand, 32106567 - 32106631
Alignment:
Q  96 acccacttgggttggcctggtggtgttggcttgggacattggagcgttct-cctctcaaggtctt 159  Q
    |||||||||||||||||||||||||||| |||||||| |||||| || || ||||||||||||||    
T  32106567 acccacttgggttggcctggtggtgttgacttgggaccttggagtgtgctccctctcaaggtctt 32106631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 96 - 158
Target Start/End: Original strand, 342396 - 342458
Alignment:
Q  96 acccacttgggttggcctggtggtgttggcttgggacattggagcgttctcctctcaaggtct 158  Q
    ||||||||||||||||||||||||||||||||| ||| |||||| || ||| || ||||||||    
T  342396 acccacttgggttggcctggtggtgttggcttgtgaccttggagtgtactcatcgcaaggtct 342458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 96 - 158
Target Start/End: Complemental strand, 3697474 - 3697412
Alignment:
Q  96 acccacttgggttggcctggtggtgttggcttgggacattggagcgttctcctctcaaggtct 158  Q
    ||||||||||||||| ||| |||| |||||||||||| |||||| || |||||||||||||||    
T  3697474 acccacttgggttggtctgatggtattggcttgggaccttggagagtgctcctctcaaggtct 3697412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 96 - 158
Target Start/End: Original strand, 16525179 - 16525241
Alignment:
Q  96 acccacttgggttggcctggtggtgttggcttgggacattggagcgttctcctctcaaggtct 158  Q
    ||||||||||||||||||| ||||||||||||||||| |||||| || |  ||||||||||||    
T  16525179 acccacttgggttggcctgatggtgttggcttgggacgttggagtgtgcgactctcaaggtct 16525241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 96 - 158
Target Start/End: Original strand, 18825342 - 18825404
Alignment:
Q  96 acccacttgggttggcctggtggtgttggcttgggacattggagcgttctcctctcaaggtct 158  Q
    |||||||||||||  |||||||||||||||||||||| | |||| || |||||||||||||||    
T  18825342 acccacttgggtttacctggtggtgttggcttgggacctaggagtgtgctcctctcaaggtct 18825404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 96 - 158
Target Start/End: Original strand, 26482094 - 26482156
Alignment:
Q  96 acccacttgggttggcctggtggtgttggcttgggacattggagcgttctcctctcaaggtct 158  Q
    |||||||| |||||||||| ||||||||||||||||| | |||| || |||||||||||||||    
T  26482094 acccacttaggttggcctgatggtgttggcttgggacctaggagtgtgctcctctcaaggtct 26482156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 98 - 158
Target Start/End: Original strand, 30359657 - 30359718
Alignment:
Q  98 ccacttgggttggcctggtggtgttggcttgggacattggagcgttctcct-ctcaaggtct 158  Q
    |||||||||||||| |||||||||||||||||||| |||||| || ||||| ||||||||||    
T  30359657 ccacttgggttggcttggtggtgttggcttgggaccttggagtgtgctcctcctcaaggtct 30359718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 96 - 161
Target Start/End: Original strand, 42602555 - 42602621
Alignment:
Q  96 acccacttgggttggcctggtggtgttggcttgggacattggagcgttctcc-tctcaaggtcttag 161  Q
    |||||||||||||||||| ||||| |||||||||||| | |||| || |||| ||||||||||||||    
T  42602555 acccacttgggttggcctagtggtattggcttgggacctgggagtgtgctccttctcaaggtcttag 42602621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 96 - 158
Target Start/End: Complemental strand, 43964063 - 43964001
Alignment:
Q  96 acccacttgggttggcctggtggtgttggcttgggacattggagcgttctcctctcaaggtct 158  Q
    ||||||||||||||| || || ||||||| ||||||| |||||| || |||||||||||||||    
T  43964063 acccacttgggttggtctagtagtgttggtttgggaccttggagtgtgctcctctcaaggtct 43964001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 99 - 148
Target Start/End: Original strand, 6890337 - 6890386
Alignment:
Q  99 cacttgggttggcctggtggtgttggcttgggacattggagcgttctcct 148  Q
    ||||| |||||||||||||||||||| |||||||||||||| || |||||    
T  6890337 cacttcggttggcctggtggtgttggtttgggacattggagtgtgctcct 6890386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 96 - 132
Target Start/End: Original strand, 37480076 - 37480112
Alignment:
Q  96 acccacttgggttggcctggtggtgttggcttgggac 132  Q
    |||||||||||||||||||||||| ||||||||||||    
T  37480076 acccacttgggttggcctggtggtattggcttgggac 37480112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 96 - 158
Target Start/End: Complemental strand, 41908713 - 41908650
Alignment:
Q  96 acccacttgggttggcctggtggtgttggcttgggacattggagcgttctcct-ctcaaggtct 158  Q
    |||||||||||||||||||||||||| || ||| ||| |||||| || ||||| ||||||||||    
T  41908713 acccacttgggttggcctggtggtgtcggtttgagaccttggagtgtgctcctcctcaaggtct 41908650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 96 - 158
Target Start/End: Complemental strand, 42327470 - 42327407
Alignment:
Q  96 acccacttgggttggcctggtggtgttggcttgggacattggagcgttctcct-ctcaaggtct 158  Q
    |||||||||||||||||| ||||| |||||||||||| | |||| || ||||| ||||||||||    
T  42327470 acccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctcctcaaggtct 42327407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 96 - 130
Target Start/End: Original strand, 31245484 - 31245518
Alignment:
Q  96 acccacttgggttggcctggtggtgttggcttggg 130  Q
    ||||||||||||||||| |||||||||||||||||    
T  31245484 acccacttgggttggcccggtggtgttggcttggg 31245518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 96 - 149
Target Start/End: Complemental strand, 7799110 - 7799057
Alignment:
Q  96 acccacttgggttggcctggtggtgttggcttgggacattggagcgttctcctc 149  Q
    |||||||||||||| ||||||||| |||||||||||| | |||| || ||||||    
T  7799110 acccacttgggttgtcctggtggtattggcttgggacttgggagtgtgctcctc 7799057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 173 - 210
Target Start/End: Complemental strand, 11138705 - 11138668
Alignment:
Q  173 caatttcggtgggctagtttgacttcttaaaagaaaaa 210  Q
    |||||||||| ||||||||||||||||||||| |||||    
T  11138705 caatttcggttggctagtttgacttcttaaaaaaaaaa 11138668  T

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Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 98 - 158
Target Start/End: Complemental strand, 13747706 - 13747646
Alignment:
Q  98 ccacttgggttggcctggtggtgttggcttgggacattggagcgttctcctctcaaggtct 158  Q
    ||||| |||||||| | |||||||||||||||||| ||||||  | |||||| ||||||||    
T  13747706 ccactggggttggcttagtggtgttggcttgggaccttggagtatgctcctcccaaggtct 13747646  T

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Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 96 - 132
Target Start/End: Complemental strand, 23052598 - 23052562
Alignment:
Q  96 acccacttgggttggcctggtggtgttggcttgggac 132  Q
    |||||||| ||||||||||||||| ||||||||||||    
T  23052598 acccacttaggttggcctggtggtattggcttgggac 23052562  T

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Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 96 - 132
Target Start/End: Complemental strand, 37756046 - 37756010
Alignment:
Q  96 acccacttgggttggcctggtggtgttggcttgggac 132  Q
    |||||||||||||||| ||||||| ||||||||||||    
T  37756046 acccacttgggttggcttggtggtattggcttgggac 37756010  T

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Target: chr6 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 13)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 96 - 158
Target Start/End: Original strand, 28028531 - 28028593
Alignment:
Q  96 acccacttgggttggcctggtggtgttggcttgggacattggagcgttctcctctcaaggtct 158  Q
    |||||||||||||||||||||||||||| |||||||| || ||| |  |||||||||||||||    
T  28028531 acccacttgggttggcctggtggtgttgacttgggacctttgagtgagctcctctcaaggtct 28028593  T

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Target: chr6; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 97 - 161
Target Start/End: Complemental strand, 20864279 - 20864215
Alignment:
Q  97 cccacttgggttggcctggtggtgttggcttgggacattggagcgttctcctctcaaggtcttag 161  Q
    |||| ||||||| |||||||||||||||||| |||| |||||| || |||||||||| |||||||    
T  20864279 cccatttgggttagcctggtggtgttggcttaggaccttggagtgtgctcctctcaatgtcttag 20864215  T

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Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 96 - 158
Target Start/End: Complemental strand, 22746 - 22684
Alignment:
Q  96 acccacttgggttggcctggtggtgttggcttgggacattggagcgttctcctctcaaggtct 158  Q
    ||||||||||||||| || ||||| |||||||||||| |||||| || ||| |||||||||||    
T  22746 acccacttgggttgggctagtggttttggcttgggaccttggagtgtgctcttctcaaggtct 22684  T

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Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 100 - 158
Target Start/End: Complemental strand, 6691621 - 6691563
Alignment:
Q  100 acttgggttggcctggtggtgttggcttgggacattggagcgttctcctctcaaggtct 158  Q
    |||||||||||||||||||||||| |||  ||| |||||| || |||||||||||||||    
T  6691621 acttgggttggcctggtggtgttgactttagaccttggagtgtgctcctctcaaggtct 6691563  T

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Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 96 - 132
Target Start/End: Original strand, 14557963 - 14557999
Alignment:
Q  96 acccacttgggttggcctggtggtgttggcttgggac 132  Q
    ||||||||||||||| |||||||||||||||||||||    
T  14557963 acccacttgggttggtctggtggtgttggcttgggac 14557999  T

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Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 96 - 136
Target Start/End: Complemental strand, 24334100 - 24334060
Alignment:
Q  96 acccacttgggttggcctggtggtgttggcttgggacattg 136  Q
    ||||||||||||||||| | |||||||||||||||||||||    
T  24334100 acccacttgggttggccggatggtgttggcttgggacattg 24334060  T

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Target: chr6; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 158
Target Start/End: Complemental strand, 6384056 - 6384015
Alignment:
Q  117 ggtgttggcttgggacattggagcgttctcctctcaaggtct 158  Q
    |||||||||||||||| |||||| || |||||||||||||||    
T  6384056 ggtgttggcttgggaccttggagtgtgctcctctcaaggtct 6384015  T

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Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 96 - 149
Target Start/End: Complemental strand, 12188378 - 12188325
Alignment:
Q  96 acccacttgggttggcctggtggtgttggcttgggacattggagcgttctcctc 149  Q
    |||||||||||||||||| ||||| |||||||||||| | |||| || ||||||    
T  12188378 acccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctc 12188325  T

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Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 96 - 149
Target Start/End: Original strand, 21418471 - 21418524
Alignment:
Q  96 acccacttgggttggcctggtggtgttggcttgggacattggagcgttctcctc 149  Q
    ||||| |||||||||||||||||| |||||||||||| | |||| || ||||||    
T  21418471 acccagttgggttggcctggtggtattggcttgggacttgggagtgtgctcctc 21418524  T

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Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 102 - 139
Target Start/End: Complemental strand, 24507605 - 24507568
Alignment:
Q  102 ttgggttggcctggtggtgttggcttgggacattggag 139  Q
    |||||||||||| |||||||||||||||||| ||||||    
T  24507605 ttgggttggcctagtggtgttggcttgggaccttggag 24507568  T

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Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 96 - 149
Target Start/End: Original strand, 33549105 - 33549158
Alignment:
Q  96 acccacttgggttggcctggtggtgttggcttgggacattggagcgttctcctc 149  Q
    ||||||||||||||| |||||||| |||||||||||| | |||| || ||||||    
T  33549105 acccacttgggttggtctggtggtattggcttgggacctgggagtgtgctcctc 33549158  T

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Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 99 - 131
Target Start/End: Complemental strand, 6776679 - 6776647
Alignment:
Q  99 cacttgggttggcctggtggtgttggcttggga 131  Q
    ||||||||||||||||||||| |||||||||||    
T  6776679 cacttgggttggcctggtggtattggcttggga 6776647  T

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Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 99 - 158
Target Start/End: Complemental strand, 10338246 - 10338186
Alignment:
Q  99 cacttgggttggcctggtggtgttggcttgggacattggagcgttctcct-ctcaaggtct 158  Q
    ||||||||||||| ||||||| |||||||||||| | |||| || ||||| ||||||||||    
T  10338246 cacttgggttggcatggtggtattggcttgggacctaggagtgtgctcctcctcaaggtct 10338186  T

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Target: scaffold0189 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0189
Description:

Target: scaffold0189; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 100 - 158
Target Start/End: Complemental strand, 17794 - 17736
Alignment:
Q  100 acttgggttggcctggtggtgttggcttgggacattggagcgttctcctctcaaggtct 158  Q
    |||||||||||||||||||| ||||| |  ||| |||||| ||||||||||||||||||    
T  17794 acttgggttggcctggtggtattggcgtaagaccttggagtgttctcctctcaaggtct 17736  T

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Target: scaffold0260 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0260
Description:

Target: scaffold0260; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 96 - 132
Target Start/End: Complemental strand, 15396 - 15360
Alignment:
Q  96 acccacttgggttggcctggtggtgttggcttgggac 132  Q
    ||||||||||||||| |||||||||||||||||||||    
T  15396 acccacttgggttggtctggtggtgttggcttgggac 15360  T

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Target: scaffold0337 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 102 - 139
Target Start/End: Original strand, 1760 - 1797
Alignment:
Q  102 ttgggttggcctggtggtgttggcttgggacattggag 139  Q
    |||||||||||| |||||||||||||||||| ||||||    
T  1760 ttgggttggcctagtggtgttggcttgggaccttggag 1797  T

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Target: scaffold0258 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 96 - 149
Target Start/End: Complemental strand, 15398 - 15345
Alignment:
Q  96 acccacttgggttggcctggtggtgttggcttgggacattggagcgttctcctc 149  Q
    ||||||||||||||| |||||||| |||||||||||| | |||| || ||||||    
T  15398 acccacttgggttggtctggtggtattggcttgggacctgggagtgtgctcctc 15345  T

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Target: scaffold0065 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 102 - 139
Target Start/End: Original strand, 12196 - 12233
Alignment:
Q  102 ttgggttggcctggtggtgttggcttgggacattggag 139  Q
    |||||||||||| |||||||||||||||||| ||||||    
T  12196 ttgggttggcctagtggtgttggcttgggaccttggag 12233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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