View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1193_low_40 (Length: 202)
Name: NF1193_low_40
Description: NF1193
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1193_low_40 |
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Alignment Details
Target: chr3 (Bit Score: 115; Significance: 1e-58; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 31386141 - 31386266
Alignment:
| Q |
1 |
ctagctataatcatgatttgacaatactagaatccacagcaccagttgtttctcatgtgagcacatttctatatttaacaccatcctatatcaaggagca |
100 |
Q |
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| T |
31386141 |
ctagctataatcatgatttgacaatactagaatccacagcaccagttgtttctcatgtgagcacattcctatattt-acaccatcctatatcaaggagca |
31386239 |
T |
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| Q |
101 |
ttagttgcaagggattacctatgatac |
127 |
Q |
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||||||||||||||||||||||||||| |
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| T |
31386240 |
ttagttgcaagggattacctatgatac |
31386266 |
T |
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