View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11940_high_24 (Length: 427)

Name: NF11940_high_24
Description: NF11940
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11940_high_24
NF11940_high_24
[»] chr3 (41 HSPs)
chr3 (30-417)||(37092555-37092941)
chr3 (40-145)||(29135855-29135960)
chr3 (47-144)||(26207868-26207965)
chr3 (40-144)||(10855327-10855431)
chr3 (47-149)||(15320124-15320226)
chr3 (40-146)||(54261167-54261273)
chr3 (40-144)||(10040500-10040603)
chr3 (52-144)||(13893869-13893961)
chr3 (51-146)||(42412845-42412940)
chr3 (40-145)||(7328786-7328891)
chr3 (47-144)||(45877397-45877494)
chr3 (40-144)||(25294903-25295007)
chr3 (40-144)||(35315899-35316003)
chr3 (40-144)||(48341963-48342067)
chr3 (40-141)||(6462358-6462459)
chr3 (47-140)||(30767314-30767407)
chr3 (44-144)||(7650170-7650270)
chr3 (40-144)||(11687169-11687273)
chr3 (40-144)||(51683014-51683118)
chr3 (40-146)||(3136754-3136859)
chr3 (47-141)||(31072824-31072918)
chr3 (40-145)||(47471774-47471878)
chr3 (40-144)||(3755513-3755617)
chr3 (41-125)||(7612987-7613071)
chr3 (40-140)||(28572271-28572371)
chr3 (40-144)||(29127862-29127966)
chr3 (40-144)||(41630572-41630676)
chr3 (40-144)||(47749165-47749268)
chr3 (47-146)||(28242219-28242318)
chr3 (83-146)||(32873652-32873714)
chr3 (81-144)||(46529971-46530034)
chr3 (47-145)||(33251604-33251702)
chr3 (95-145)||(39849014-39849064)
chr3 (100-145)||(29762275-29762320)
chr3 (40-144)||(30045764-30045868)
chr3 (40-143)||(35923683-35923786)
chr3 (47-146)||(49543460-49543559)
chr3 (78-140)||(22405641-22405703)
chr3 (58-144)||(40944826-40944912)
chr3 (58-139)||(33560808-33560889)
chr3 (40-145)||(45450507-45450609)
[»] chr4 (44 HSPs)
chr4 (47-144)||(47078406-47078503)
chr4 (40-144)||(1446774-1446878)
chr4 (40-144)||(24166398-24166502)
chr4 (40-144)||(29895735-29895839)
chr4 (40-144)||(53599008-53599112)
chr4 (40-147)||(2559252-2559359)
chr4 (40-145)||(55920981-55921086)
chr4 (40-146)||(38165973-38166079)
chr4 (47-144)||(41339461-41339558)
chr4 (39-144)||(52950030-52950135)
chr4 (40-144)||(6779159-6779263)
chr4 (52-149)||(1940845-1940942)
chr4 (33-146)||(27531710-27531822)
chr4 (81-141)||(6032740-6032800)
chr4 (48-144)||(27248376-27248472)
chr4 (40-145)||(3574505-3574610)
chr4 (47-144)||(33647669-33647766)
chr4 (47-144)||(41162948-41163045)
chr4 (41-145)||(13073485-13073589)
chr4 (40-144)||(49260724-49260828)
chr4 (86-145)||(14567198-14567257)
chr4 (81-144)||(34667702-34667765)
chr4 (47-144)||(12703611-12703708)
chr4 (40-145)||(14123963-14124068)
chr4 (47-144)||(19651511-19651608)
chr4 (40-144)||(43458561-43458665)
chr4 (47-122)||(38168227-38168302)
chr4 (40-146)||(295592-295697)
chr4 (40-146)||(5472907-5473013)
chr4 (47-127)||(36262833-36262911)
chr4 (40-144)||(8888970-8889074)
chr4 (22-138)||(13552068-13552184)
chr4 (40-144)||(20532468-20532572)
chr4 (40-144)||(26480008-26480112)
chr4 (40-127)||(15839994-15840080)
chr4 (40-139)||(20421727-20421825)
chr4 (40-123)||(36145274-36145357)
chr4 (40-139)||(40272390-40272489)
chr4 (40-127)||(42722636-42722723)
chr4 (47-145)||(15732514-15732612)
chr4 (47-109)||(43468330-43468392)
chr4 (40-109)||(3159528-3159597)
chr4 (40-141)||(29588687-29588788)
chr4 (96-144)||(15829647-15829695)
[»] chr8 (39 HSPs)
chr8 (40-146)||(2467177-2467283)
chr8 (40-144)||(1013036-1013140)
chr8 (40-144)||(38922473-38922577)
chr8 (40-144)||(8141049-8141153)
chr8 (40-144)||(10927553-10927657)
chr8 (47-146)||(24837187-24837286)
chr8 (47-144)||(44893344-44893441)
chr8 (40-144)||(14666130-14666234)
chr8 (40-144)||(34846761-34846864)
chr8 (47-144)||(11785864-11785959)
chr8 (40-144)||(6100419-6100523)
chr8 (58-146)||(17981386-17981474)
chr8 (40-146)||(15884615-15884720)
chr8 (40-141)||(4479355-4479455)
chr8 (47-144)||(9860061-9860159)
chr8 (58-140)||(33401876-33401958)
chr8 (58-144)||(45521116-45521201)
chr8 (40-145)||(8997603-8997708)
chr8 (47-144)||(13085471-13085568)
chr8 (83-144)||(18091348-18091409)
chr8 (49-149)||(2964018-2964118)
chr8 (73-141)||(38235855-38235923)
chr8 (40-147)||(16893881-16893988)
chr8 (40-144)||(583761-583863)
chr8 (40-96)||(6042816-6042872)
chr8 (84-144)||(10535506-10535566)
chr8 (40-144)||(14846523-14846626)
chr8 (40-144)||(33935794-33935898)
chr8 (40-144)||(34613837-34613941)
chr8 (40-146)||(68157-68263)
chr8 (40-146)||(3418572-3418678)
chr8 (72-146)||(30903281-30903355)
chr8 (41-146)||(6940503-6940608)
chr8 (83-144)||(24938664-24938725)
chr8 (40-141)||(34710626-34710727)
chr8 (47-124)||(44031506-44031583)
chr8 (96-144)||(7673769-7673816)
chr8 (84-144)||(17845680-17845740)
chr8 (96-144)||(22810027-22810075)
[»] chr5 (40 HSPs)
chr5 (40-145)||(5731979-5732084)
chr5 (40-144)||(19572668-19572772)
chr5 (40-145)||(28857071-28857176)
chr5 (40-144)||(42086271-42086375)
chr5 (47-149)||(7866520-7866622)
chr5 (47-145)||(41163526-41163623)
chr5 (40-146)||(20682676-20682783)
chr5 (47-149)||(9812811-9812913)
chr5 (40-146)||(30349521-30349627)
chr5 (40-133)||(25417242-25417335)
chr5 (40-144)||(1538375-1538479)
chr5 (40-144)||(11845860-11845964)
chr5 (81-144)||(6767151-6767214)
chr5 (47-149)||(12704953-12705055)
chr5 (40-125)||(1898964-1899049)
chr5 (64-144)||(28856921-28857001)
chr5 (60-147)||(5079272-5079359)
chr5 (30-144)||(20516450-20516564)
chr5 (30-140)||(25950631-25950741)
chr5 (47-144)||(8513463-8513560)
chr5 (40-141)||(20692880-20692981)
chr5 (81-149)||(12766070-12766138)
chr5 (40-144)||(37263185-37263288)
chr5 (41-145)||(38297024-38297128)
chr5 (58-144)||(18136357-18136443)
chr5 (40-145)||(20525781-20525886)
chr5 (48-144)||(30995065-30995161)
chr5 (40-144)||(35403571-35403675)
chr5 (22-89)||(40060295-40060362)
chr5 (30-144)||(16755005-16755119)
chr5 (83-145)||(39728330-39728392)
chr5 (40-146)||(42861277-42861383)
chr5 (40-145)||(38897778-38897882)
chr5 (96-144)||(23383592-23383640)
chr5 (40-123)||(13664225-13664308)
chr5 (47-141)||(7308430-7308524)
chr5 (81-146)||(3654012-3654077)
chr5 (93-146)||(24875287-24875340)
chr5 (40-144)||(4016314-4016418)
chr5 (47-127)||(14152011-14152091)
[»] chr7 (39 HSPs)
chr7 (40-144)||(48804629-48804733)
chr7 (40-144)||(43925458-43925562)
chr7 (40-141)||(1797409-1797510)
chr7 (40-144)||(47341822-47341926)
chr7 (41-144)||(45447916-45448019)
chr7 (40-146)||(13095802-13095908)
chr7 (39-145)||(22268087-22268193)
chr7 (47-149)||(22993433-22993535)
chr7 (40-144)||(4195261-4195365)
chr7 (40-144)||(17748441-17748545)
chr7 (40-144)||(18785615-18785719)
chr7 (58-149)||(21530689-21530780)
chr7 (42-144)||(10047937-10048039)
chr7 (40-142)||(34659174-34659276)
chr7 (47-144)||(16802069-16802166)
chr7 (47-140)||(42032046-42032139)
chr7 (47-145)||(4228820-4228915)
chr7 (57-141)||(5069891-5069975)
chr7 (81-149)||(34127720-34127788)
chr7 (40-147)||(19914762-19914868)
chr7 (47-145)||(1605886-1605984)
chr7 (47-144)||(26423353-26423450)
chr7 (47-144)||(39420784-39420880)
chr7 (40-145)||(43862031-43862136)
chr7 (40-144)||(42210321-42210425)
chr7 (47-146)||(22973911-22974010)
chr7 (40-146)||(27028223-27028329)
chr7 (40-110)||(38578926-38578996)
chr7 (73-146)||(11607075-11607148)
chr7 (59-144)||(14650263-14650348)
chr7 (47-140)||(23658130-23658222)
chr7 (47-144)||(27875154-27875250)
chr7 (22-138)||(9685691-9685807)
chr7 (40-144)||(23823895-23823999)
chr7 (40-144)||(43346838-43346942)
chr7 (40-145)||(37514866-37514971)
chr7 (83-140)||(46414625-46414682)
chr7 (105-145)||(5039542-5039582)
chr7 (105-145)||(22573758-22573798)
[»] chr2 (44 HSPs)
chr2 (40-144)||(38005345-38005449)
chr2 (47-144)||(7747217-7747314)
chr2 (47-144)||(18902596-18902693)
chr2 (40-144)||(331444-331548)
chr2 (40-144)||(8410074-8410178)
chr2 (40-146)||(3643946-3644052)
chr2 (47-144)||(21180380-21180477)
chr2 (40-140)||(7787003-7787103)
chr2 (40-144)||(10026675-10026779)
chr2 (40-144)||(22593078-22593181)
chr2 (40-128)||(41220594-41220682)
chr2 (47-144)||(15079426-15079523)
chr2 (40-141)||(37560119-37560220)
chr2 (40-144)||(12864167-12864271)
chr2 (40-144)||(34356149-34356253)
chr2 (40-144)||(42770710-42770814)
chr2 (47-146)||(39201574-39201673)
chr2 (40-146)||(33005693-33005798)
chr2 (40-146)||(37804950-37805056)
chr2 (40-149)||(6358210-6358319)
chr2 (47-144)||(14853433-14853530)
chr2 (49-146)||(29422156-29422253)
chr2 (40-133)||(39806944-39807037)
chr2 (47-144)||(41031972-41032068)
chr2 (40-144)||(2550811-2550915)
chr2 (40-144)||(19976866-19976970)
chr2 (53-144)||(10046548-10046639)
chr2 (41-144)||(11069821-11069924)
chr2 (47-145)||(2528407-2528505)
chr2 (40-118)||(10823029-10823107)
chr2 (47-141)||(31596498-31596592)
chr2 (40-141)||(21286390-21286491)
chr2 (40-144)||(2149253-2149358)
chr2 (40-144)||(20612594-20612699)
chr2 (47-144)||(44139427-44139524)
chr2 (95-144)||(44945537-44945586)
chr2 (40-144)||(9360807-9360911)
chr2 (40-144)||(10669535-10669639)
chr2 (40-144)||(25604538-25604641)
chr2 (40-144)||(29653571-29653674)
chr2 (40-127)||(25540463-25540550)
chr2 (47-141)||(16034883-16034977)
chr2 (47-140)||(24179518-24179608)
chr2 (47-144)||(40968981-40969078)
[»] chr6 (29 HSPs)
chr6 (40-144)||(5253282-5253386)
chr6 (40-144)||(21898595-21898699)
chr6 (40-144)||(29333198-29333301)
chr6 (40-144)||(19230618-19230720)
chr6 (40-144)||(29444824-29444928)
chr6 (40-151)||(12606370-12606481)
chr6 (47-149)||(8612040-8612142)
chr6 (58-144)||(21016828-21016914)
chr6 (40-145)||(10311528-10311633)
chr6 (40-141)||(13036063-13036164)
chr6 (85-149)||(5759570-5759634)
chr6 (41-145)||(9179796-9179900)
chr6 (47-146)||(6606163-6606262)
chr6 (47-149)||(14107424-14107526)
chr6 (81-145)||(2271401-2271465)
chr6 (47-145)||(3588011-3588109)
chr6 (47-144)||(19089445-19089542)
chr6 (47-122)||(34954685-34954760)
chr6 (96-146)||(24671981-24672031)
chr6 (83-144)||(13468880-13468941)
chr6 (96-145)||(15643943-15643992)
chr6 (40-141)||(3601034-3601135)
chr6 (40-141)||(13584509-13584609)
chr6 (95-144)||(17115011-17115060)
chr6 (40-140)||(30788912-30789010)
chr6 (47-140)||(32048402-32048495)
chr6 (96-144)||(3030733-3030781)
chr6 (40-144)||(8932608-8932712)
chr6 (40-144)||(8944074-8944178)
[»] chr1 (50 HSPs)
chr1 (47-144)||(18915811-18915908)
chr1 (40-144)||(40288537-40288641)
chr1 (40-152)||(49078050-49078162)
chr1 (40-145)||(8763934-8764039)
chr1 (40-145)||(33418175-33418280)
chr1 (40-144)||(5855466-5855570)
chr1 (49-144)||(11397958-11398052)
chr1 (22-144)||(51437413-51437535)
chr1 (40-144)||(26660082-26660186)
chr1 (40-144)||(33004075-33004179)
chr1 (40-143)||(41663916-41664019)
chr1 (47-146)||(45536651-45536749)
chr1 (27-144)||(8905198-8905314)
chr1 (40-145)||(43959881-43959986)
chr1 (49-145)||(15238175-15238271)
chr1 (81-145)||(41743216-41743280)
chr1 (40-144)||(48798130-48798234)
chr1 (40-146)||(17642064-17642170)
chr1 (40-146)||(26325754-26325860)
chr1 (47-141)||(47312966-47313059)
chr1 (47-144)||(2980998-2981095)
chr1 (40-145)||(14254328-14254433)
chr1 (73-146)||(25165344-25165416)
chr1 (40-125)||(45361942-45362027)
chr1 (40-140)||(9659239-9659338)
chr1 (40-132)||(10336472-10336564)
chr1 (40-144)||(10422732-10422836)
chr1 (40-140)||(32150982-32151082)
chr1 (40-124)||(34334355-34334439)
chr1 (49-127)||(30927796-30927874)
chr1 (47-145)||(31152659-31152757)
chr1 (96-146)||(40226358-40226408)
chr1 (81-143)||(42744732-42744794)
chr1 (47-136)||(6563393-6563482)
chr1 (40-145)||(9853337-9853441)
chr1 (40-125)||(32142906-32142990)
chr1 (57-145)||(937563-937650)
chr1 (68-140)||(1764277-1764349)
chr1 (96-144)||(5503975-5504023)
chr1 (40-140)||(31734237-31734336)
chr1 (78-141)||(10173069-10173132)
chr1 (47-146)||(15465907-15466006)
chr1 (73-144)||(26258640-26258711)
chr1 (40-122)||(16956432-16956514)
chr1 (96-146)||(18808207-18808257)
chr1 (40-146)||(34877932-34878038)
chr1 (47-140)||(32819-32912)
chr1 (40-145)||(12036804-12036909)
chr1 (96-140)||(14357703-14357747)
chr1 (83-143)||(45726536-45726596)
[»] scaffold0002 (3 HSPs)
scaffold0002 (41-146)||(319367-319471)
scaffold0002 (58-144)||(516-602)
scaffold0002 (47-144)||(412092-412189)
[»] scaffold0170 (1 HSPs)
scaffold0170 (40-146)||(9789-9895)
[»] scaffold0384 (1 HSPs)
scaffold0384 (47-144)||(5919-6015)
[»] scaffold0006 (1 HSPs)
scaffold0006 (52-149)||(68458-68555)
[»] scaffold0005 (2 HSPs)
scaffold0005 (40-144)||(271133-271237)
scaffold0005 (86-145)||(250118-250177)
[»] scaffold0316 (1 HSPs)
scaffold0316 (40-143)||(1673-1776)
[»] scaffold0376 (1 HSPs)
scaffold0376 (47-149)||(12611-12713)
[»] scaffold0009 (1 HSPs)
scaffold0009 (46-144)||(9382-9480)
[»] scaffold0050 (1 HSPs)
scaffold0050 (40-119)||(72604-72682)
[»] scaffold0079 (1 HSPs)
scaffold0079 (40-114)||(8151-8224)
[»] scaffold0029 (1 HSPs)
scaffold0029 (58-144)||(40990-41076)
[»] scaffold0341 (1 HSPs)
scaffold0341 (47-136)||(18586-18675)
[»] scaffold0209 (1 HSPs)
scaffold0209 (40-144)||(12521-12623)
[»] scaffold0086 (1 HSPs)
scaffold0086 (47-144)||(26129-26226)
[»] scaffold0332 (1 HSPs)
scaffold0332 (69-141)||(15280-15352)
[»] scaffold0016 (1 HSPs)
scaffold0016 (96-144)||(8825-8873)
[»] scaffold0004 (1 HSPs)
scaffold0004 (40-103)||(7894-7957)


Alignment Details
Target: chr3 (Bit Score: 356; Significance: 0; HSPs: 41)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 356; E-Value: 0
Query Start/End: Original strand, 30 - 417
Target Start/End: Original strand, 37092555 - 37092941
Alignment:
Q  30 taatccggctcatgcgtactggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaac 129  Q
    ||||| |||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||| |    
T  37092555 taatctggctcatgcgcactggccaaacgttgttccccttggaaatctaatccgatattccacgggtacgtccttggaagaagctccttgccactggagc 37092654  T
Q  130 ccaagcaacttggtttactttctttatatagttaggaatatcattgtgttaagaaagatatggttgtgcaggtgggatctttagagggaagaggtgtgat 229  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37092655 ccaagcaacttggtttactttctttatatagttaggaatatcat-gtgttaagaaagatatggttgtgcaggtgggatctttagagggaagaggtgtgat 37092753  T
Q  230 agaactcgaaaacgcgagcttacttaatccttcttcatttcctaaaaaagatgcatcatttggagaagaagattcaccaattgatcatgagtataggaat 329  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37092754 agaactcgaaaacgcgagcttacttaatccttcttcatttcctaaaaaagatgcatcatttggagaagaagattcaccaattgatcatgagtataggaat 37092853  T
Q  330 ttctcacaggatgtaataaaaattaagatgcttagtagcataaaacttgtaatcctttcaaccaagataaacttactcctgccctttg 417  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  37092854 ttctcacaggatgtaataaaaattaagatgcttagtagcataaaacttgtaatcctttcaaccaagataaacttactcctgccttttg 37092941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 40 - 145
Target Start/End: Complemental strand, 29135960 - 29135855
Alignment:
Q  40 catgcgtactggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaact 139  Q
    |||||| |||||||||  |||||||||| ||| |||| ||||||||||||| ||| |||||||| ||||||||||||||||||||||| ||||||||| |    
T  29135960 catgcgcactggccaagtgttgttccccctgggaatcgaatccggtattccccggatacgtccttggaagaagctccttgccactggagcccaagcaatt 29135861  T
Q  140 tggttt 145  Q
    ||||||    
T  29135860 tggttt 29135855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 47 - 144
Target Start/End: Original strand, 26207868 - 26207965
Alignment:
Q  47 actggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaacttggtt 144  Q
    ||||| ||| ||||||||||| ||| |||| || |||||||||| ||||||| |||| ||||| ||||||||||||||||| ||||||||||||||||    
T  26207868 actggacaagcgttgttccccgtgggaatcgaacccggtattccccgggtacatccttggaaggagctccttgccactggagcccaagcaacttggtt 26207965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 40 - 144
Target Start/End: Complemental strand, 10855431 - 10855327
Alignment:
Q  40 catgcgtactggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaact 139  Q
    |||||||||||||||| ||||||||||| |||||||| || |||||||| | |  |||| |||| ||||| ||||||||||||||||| ||||| |||||    
T  10855431 catgcgtactggccaagcgttgttccccctggaaatcaaacccggtatttcccaagtacatccttggaaggagctccttgccactggagcccaaacaact 10855332  T
Q  140 tggtt 144  Q
    |||||    
T  10855331 tggtt 10855327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 47 - 149
Target Start/End: Complemental strand, 15320226 - 15320124
Alignment:
Q  47 actggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaacttggttta 146  Q
    ||||||||| | ||||||| | | |||||| || |||||||||| |||||||||||| ||||| |||||||||||||||||  |||| ||||||||||||    
T  15320226 actggccaatcattgttcctcctcgaaatcgaacccggtattccccgggtacgtccttggaaggagctccttgccactggagtccaaacaacttggttta 15320127  T
Q  147 ctt 149  Q
    |||    
T  15320126 ctt 15320124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 40 - 146
Target Start/End: Complemental strand, 54261273 - 54261167
Alignment:
Q  40 catgcgtactggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaact 139  Q
    |||||| ||||||||| ||||||||| | | | |||| || |||||||||| | |||||||||| ||||| ||||||||||||||||| ||||| |||||    
T  54261273 catgcgcactggccaagcgttgttcctcctaggaatcgaacccggtattccccaggtacgtccttggaaggagctccttgccactggagcccaaacaact 54261174  T
Q  140 tggttta 146  Q
    |||||||    
T  54261173 tggttta 54261167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 40 - 144
Target Start/End: Complemental strand, 10040603 - 10040500
Alignment:
Q  40 catgcgtactggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaact 139  Q
    |||||| ||||||||| ||||||||||||  ||| || || ||| |||||| ||||||||||||  |||| ||||||||||||||||| |||||||||||    
T  10040603 catgcgcactggccaagcgttgttcccctgagaa-tcgaacccgatattccccgggtacgtccttagaaggagctccttgccactggagcccaagcaact 10040505  T
Q  140 tggtt 144  Q
    |||||    
T  10040504 tggtt 10040500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 52 - 144
Target Start/End: Complemental strand, 13893961 - 13893869
Alignment:
Q  52 ccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaacttggtt 144  Q
    |||| ||||||||||| |||||||| || |||||||||| |||  ||||||| ||||| ||||||||||||||||| ||||| ||||||||||    
T  13893961 ccaagcgttgttccccctggaaatccaacccggtattccccggacacgtccttggaaggagctccttgccactggagcccaaacaacttggtt 13893869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 51 - 146
Target Start/End: Original strand, 42412845 - 42412940
Alignment:
Q  51 gccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaacttggttta 146  Q
    ||||| |||||||||||  || |||| || |||||||||| ||| |||||||| ||||| |||||||||||| |||| ||||||||||||||||||    
T  42412845 gccaagcgttgttccccccgggaatcgaacccggtattccccggatacgtccttggaaggagctccttgccattggagcccaagcaacttggttta 42412940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 40 - 145
Target Start/End: Complemental strand, 7328891 - 7328786
Alignment:
Q  40 catgcgtactggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaact 139  Q
    |||||| |||||||||  |||||||||| ||| |||| || |||||||| | |||||||||||| ||||| | |||||||||||| || | |||||||||    
T  7328891 catgcgcactggccaagtgttgttccccctgggaatcgaacccggtatttcccgggtacgtccttggaaggaactccttgccactagagcacaagcaact 7328792  T
Q  140 tggttt 145  Q
    ||||||    
T  7328791 tggttt 7328786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 47 - 144
Target Start/End: Complemental strand, 45877494 - 45877397
Alignment:
Q  47 actggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaacttggtt 144  Q
    |||||||||  |||||| ||| |||||||| || |||||||||| ||| |||||||| |||||  |||||||||||||||| ||||| ||||||||||    
T  45877494 actggccaagtgttgtttcccctggaaatcgaacccggtattccccggatacgtccttggaaggggctccttgccactggagcccaaacaacttggtt 45877397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 40 - 144
Target Start/End: Complemental strand, 25295007 - 25294903
Alignment:
Q  40 catgcgtactggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaact 139  Q
    |||||| |||||||||  |||||| |||  |  |||| || |||||||||| ||| |||||||| ||||| ||||||||||||||||| |||||||||||    
T  25295007 catgcgcactggccaagtgttgtttccccagagaatcaaacccggtattccccggatacgtccttggaaggagctccttgccactggagcccaagcaact 25294908  T
Q  140 tggtt 144  Q
    |||||    
T  25294907 tggtt 25294903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 40 - 144
Target Start/End: Complemental strand, 35316003 - 35315899
Alignment:
Q  40 catgcgtactggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaact 139  Q
    |||||| |||||||||  |||||||||| ||| |||| || ||| |||||  |||||||||||| ||||| ||||| ||||||||||| ||||| |||||    
T  35316003 catgcgcactggccaagtgttgttccccctgggaatcgaacccgatattctccgggtacgtccttggaaggagctctttgccactggagcccaaacaact 35315904  T
Q  140 tggtt 144  Q
    |||||    
T  35315903 tggtt 35315899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 40 - 144
Target Start/End: Complemental strand, 48342067 - 48341963
Alignment:
Q  40 catgcgtactggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaact 139  Q
    |||||| ||| ||||| ||||||||||| | | |||  || |||||||||| | |||||||||| ||||| ||||||||||||||||| ||||| |||||    
T  48342067 catgcgcactagccaagcgttgttccccctaggaatagaacccggtattccccaggtacgtccttggaaggagctccttgccactggagcccaaacaact 48341968  T
Q  140 tggtt 144  Q
    |||||    
T  48341967 tggtt 48341963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 40 - 141
Target Start/End: Complemental strand, 6462459 - 6462358
Alignment:
Q  40 catgcgtactggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaact 139  Q
    |||||| ||||||||| |||||||| || ||  |||| || |||||||||| | | |||||||| ||||| |||||||||||||| || |||||||||||    
T  6462459 catgcgcactggccaagcgttgttctccctgtgaatcgaacccggtattccccagatacgtccttggaaggagctccttgccactagagcccaagcaact 6462360  T
Q  140 tg 141  Q
    ||    
T  6462359 tg 6462358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 47 - 140
Target Start/End: Original strand, 30767314 - 30767407
Alignment:
Q  47 actggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaactt 140  Q
    |||||||||  |||||||||| |||||||| || ||| |||||| | ||||| |||| ||||| | ||||||||||||||| ||||||||||||    
T  30767314 actggccaagtgttgttccccctggaaatcgaacccgatattccccaggtacatccttggaaggaactccttgccactggagcccaagcaactt 30767407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 44 - 144
Target Start/End: Complemental strand, 7650270 - 7650170
Alignment:
Q  44 cgtactggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaacttggt 143  Q
    ||||||||||||  |||||||||| |||||||| || ||||||||||    |||| |||| | ||| | ||||||||||||||||||||| |||||||||    
T  7650270 cgtactggccaagtgttgttccccctggaaatcgaacccggtattccctaagtacatccttgaaaggaactccttgccactggaacccaaacaacttggt 7650171  T
Q  144 t 144  Q
    |    
T  7650170 t 7650170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 40 - 144
Target Start/End: Original strand, 11687169 - 11687273
Alignment:
Q  40 catgcgtactggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaact 139  Q
    |||||| ||||||||| | ||||||||| ||  |||| || |||||||||  | |||||||||| ||||| |||| |||||||||||| ||||| |||||    
T  11687169 catgcgcactggccaagcattgttccccctgagaatcaaacccggtattctccaggtacgtccttggaaggagcttcttgccactggagcccaaacaact 11687268  T
Q  140 tggtt 144  Q
    |||||    
T  11687269 tggtt 11687273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 40 - 144
Target Start/End: Original strand, 51683014 - 51683118
Alignment:
Q  40 catgcgtactggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaact 139  Q
    |||||| ||||| ||| ||||||||||| ||| |||| || | |||||||| ||| |||||| | ||||| ||||||| ||||||||| ||||| |||||    
T  51683014 catgcgcactggtcaagcgttgttccccctgggaatcgaacctggtattccccggatacgtctttggaaggagctcctcgccactggagcccaaacaact 51683113  T
Q  140 tggtt 144  Q
    |||||    
T  51683114 tggtt 51683118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 40 - 146
Target Start/End: Original strand, 3136754 - 3136859
Alignment:
Q  40 catgcgtactggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaact 139  Q
    |||||| |||| ||||  ||||||||||| | ||||| ||||||||||||| |||||||||||| | ||| |||| |||||||| ||| ||||| |||||    
T  3136754 catgcgcactgcccaagtgttgttcccct-gaaaatcgaatccggtattccccgggtacgtccttgaaaggagcttcttgccacgggagcccaaacaact 3136852  T
Q  140 tggttta 146  Q
    | |||||    
T  3136853 ttgttta 3136859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 47 - 141
Target Start/End: Complemental strand, 31072918 - 31072824
Alignment:
Q  47 actggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaacttg 141  Q
    |||| |||| ||||||||||| |||||||| || | |||||||  |||||||||||| | ||| |||||||||||| |||| ||||| |||||||    
T  31072918 actgaccaagcgttgttccccctggaaatcgaacctggtattctccgggtacgtccttgaaaggagctccttgccattggagcccaaacaacttg 31072824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 40 - 145
Target Start/End: Complemental strand, 47471878 - 47471774
Alignment:
Q  40 catgcgtactggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaact 139  Q
    |||||| ||| ||||| | |||||||||| |||| || || ||||||||||   |||||||||| ||||| ||||| |||||||| || |||||||||||    
T  47471878 catgcgcactagccaagcattgttcccctgggaa-tcgaacccggtattccctaggtacgtccttggaaggagctctttgccactagagcccaagcaact 47471780  T
Q  140 tggttt 145  Q
    ||||||    
T  47471779 tggttt 47471774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 40 - 144
Target Start/End: Complemental strand, 3755617 - 3755513
Alignment:
Q  40 catgcgtactggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaact 139  Q
    |||||| ||||| ||||||||||||| | ||| |||| ||  ||||||||| ||| |||||||| | ||  ||||| |||||||||||  ||||||||||    
T  3755617 catgcgcactggtcaaacgttgttcctcctgggaatcgaagtcggtattccccggatacgtccttgaaaagagctctttgccactggagtccaagcaact 3755518  T
Q  140 tggtt 144  Q
    |||||    
T  3755517 tggtt 3755513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 41 - 125
Target Start/End: Original strand, 7612987 - 7613071
Alignment:
Q  41 atgcgtactggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactg 125  Q
    ||||| ||| ||||| ||||||||||| ||| |||| || |||||||||| |  ||||||||| ||||| |||||||||||||||    
T  7612987 atgcgcactagccaagcgttgttccccctgggaatcgaacccggtattccccaagtacgtccttggaaggagctccttgccactg 7613071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 40 - 140
Target Start/End: Original strand, 28572271 - 28572371
Alignment:
Q  40 catgcgtactggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaact 139  Q
    ||||| |||||||||| ||||||| ||| ||| |||| || || ||||||| ||||| ||| || | ||| ||||||||||||||||| | |||||||||    
T  28572271 catgcatactggccaagcgttgtttcccctgggaatcgaacccagtattccccgggtgcgttcttgaaaggagctccttgccactggagcacaagcaact 28572370  T
Q  140 t 140  Q
    |    
T  28572371 t 28572371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 40 - 144
Target Start/End: Complemental strand, 29127966 - 29127862
Alignment:
Q  40 catgcgtactggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaact 139  Q
    |||||| |||| ||||  ||||||| || |||||||| || ||| |||||| | | |||||||| ||||| | ||||||||||||||| ||||| |||||    
T  29127966 catgcgcactgaccaagtgttgttctccctggaaatcgaacccgatattccccagatacgtccttggaaggatctccttgccactggagcccaaacaact 29127867  T
Q  140 tggtt 144  Q
    |||||    
T  29127866 tggtt 29127862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 40 - 144
Target Start/End: Original strand, 41630572 - 41630676
Alignment:
Q  40 catgcgtactggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaact 139  Q
    |||||| ||||| ||| ||||||||||||||| |||  || ||||||||   ||| |||||||  ||||| ||||||||| ||||||| ||||| |||||    
T  41630572 catgcgcactgggcaagcgttgttccccttgggaattgaacccggtattttccggttacgtccatggaaggagctccttgtcactggagcccaaacaact 41630671  T
Q  140 tggtt 144  Q
    |||||    
T  41630672 tggtt 41630676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 40 - 144
Target Start/End: Original strand, 47749165 - 47749268
Alignment:
Q  40 catgcgtactggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaact 139  Q
    |||||| |||||||||  ||||||||||| |||| || || ||||||||||  || |||||||| ||||||||||| || |||||||| ||||| ||| |    
T  47749165 catgcgcactggccaagagttgttcccctaggaa-tcgaacccggtattccctggatacgtccttggaagaagctcattaccactggagcccaaacaatt 47749263  T
Q  140 tggtt 144  Q
    |||||    
T  47749264 tggtt 47749268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 47 - 146
Target Start/End: Complemental strand, 28242318 - 28242219
Alignment:
Q  47 actggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaacttggttta 146  Q
    ||||||||||| ||||||| | ||| ||||||| |||||||||  ||| |||||| | ||||| ||||| || |||| ||| | ||||||||||||||||    
T  28242318 actggccaaacattgttcctcctggcaatctaacccggtattctccggatacgtcattggaaggagctctttaccaccggagctcaagcaacttggttta 28242219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 83 - 146
Target Start/End: Original strand, 32873652 - 32873714
Alignment:
Q  83 ggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaacttggttta 146  Q
    |||||||| |||||||||||| ||||  ||||||||||||||||| ||||| ||||||||||||    
T  32873652 ggtattcc-cgggtacgtccttggaatgagctccttgccactggagcccaaacaacttggttta 32873714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 81 - 144
Target Start/End: Original strand, 46529971 - 46530034
Alignment:
Q  81 ccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaacttggtt 144  Q
    |||||||||| | |||||||||| | ||| ||||||||||||||||| ||||| ||||||||||    
T  46529971 ccggtattccccaggtacgtccttgaaaggagctccttgccactggagcccaaacaacttggtt 46530034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 47 - 145
Target Start/End: Complemental strand, 33251702 - 33251604
Alignment:
Q  47 actggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaacttggttt 145  Q
    ||||||||||||||||||||   || |||| || |||||||||| |   |||||||| ||||| ||||| ||||||| ||| ||||| |||||||||||    
T  33251702 actggccaaacgttgttcccaccgggaatcgaacccggtattcccctaatacgtccttggaaggagctcattgccaccggagcccaaacaacttggttt 33251604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 95 - 145
Target Start/End: Complemental strand, 39849064 - 39849014
Alignment:
Q  95 gtacgtcctgggaagaagctccttgccactggaacccaagcaacttggttt 145  Q
    ||||||||| ||||| ||||||||||||||||| ||||||| |||||||||    
T  39849064 gtacgtccttggaaggagctccttgccactggagcccaagcgacttggttt 39849014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 100 - 145
Target Start/End: Original strand, 29762275 - 29762320
Alignment:
Q  100 tcctgggaagaagctccttgccactggaacccaagcaacttggttt 145  Q
    |||| ||||| ||||||||||||||||| |||||||||||||||||    
T  29762275 tccttggaaggagctccttgccactggagcccaagcaacttggttt 29762320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 40 - 144
Target Start/End: Complemental strand, 30045868 - 30045764
Alignment:
Q  40 catgcgtactggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaact 139  Q
    |||||| ||||||||| ||||||||||| | | |||| || |||||||||| |  |||||| ||   ||| ||||| |||||||| || |||||||||||    
T  30045868 catgcgcactggccaagcgttgttccccctaggaatcgaacccggtattccccatgtacgttcttaaaaggagctcattgccacttgagcccaagcaact 30045769  T
Q  140 tggtt 144  Q
    |||||    
T  30045768 tggtt 30045764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 40 - 143
Target Start/End: Original strand, 35923683 - 35923786
Alignment:
Q  40 catgcgtactggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaact 139  Q
    |||||| ||||||||||||||||||||| |   |||| || | |||||||  | |||||||||| ||||  ||||| |||||||| || ||||| |||||    
T  35923683 catgcgcactggccaaacgttgttccccctatgaatcgaacctggtattctccaggtacgtccttggaatgagctcattgccactagagcccaaacaact 35923782  T
Q  140 tggt 143  Q
    ||||    
T  35923783 tggt 35923786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 47 - 146
Target Start/End: Complemental strand, 49543559 - 49543460
Alignment:
Q  47 actggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaacttggttta 146  Q
    |||| |||||||||||||||| ||  |||| || ||| ||||||  || |||||||| ||||| ||||||||||||||  | ||||| ||| ||||||||    
T  49543559 actgaccaaacgttgttccccatgagaatcgaacccgatattcccgggatacgtccttggaaggagctccttgccactaaagcccaaacaaattggttta 49543460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 78 - 140
Target Start/End: Original strand, 22405641 - 22405703
Alignment:
Q  78 aatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaactt 140  Q
    ||||||||||| ||||| |||||| | || || ||||||||||||||||| ||||| ||||||    
T  22405641 aatccggtatttcacggatacgtcattggtaggagctccttgccactggagcccaaacaactt 22405703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 58 - 144
Target Start/End: Complemental strand, 40944912 - 40944826
Alignment:
Q  58 gttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaacttggtt 144  Q
    |||||||||| ||| |||| ||  ||||||||   || |||||||| ||||| |||| |||||||| ||| ||||||||||||||||    
T  40944912 gttgttccccctgggaatcgaactcggtattctctggatacgtccttggaaggagcttcttgccaccggagcccaagcaacttggtt 40944826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 58 - 139
Target Start/End: Complemental strand, 33560889 - 33560808
Alignment:
Q  58 gttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaact 139  Q
    |||||||||| |||  ||| || |||||||||| | ||||| |||| ||||| ||||||||||||||| | ||||| |||||    
T  33560889 gttgttccccctggggatcaaacccggtattccccaggtacatccttggaaggagctccttgccactgaagcccaaacaact 33560808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 145
Target Start/End: Original strand, 45450507 - 45450609
Alignment:
Q  40 catgcgtactggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaact 139  Q
    |||||| ||||| ||| | |||||||||| ||||||| || || |||||| |||| |||||| ||| | || |||| ||||||||||| |||||||||||    
T  45450507 catgcgcactggtcaagcattgttcccct-ggaaatcaaacccagtattctacggatacgtcttggaatga-gctc-ttgccactggagcccaagcaact 45450603  T
Q  140 tggttt 145  Q
    ||||||    
T  45450604 tggttt 45450609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 66; Significance: 5e-29; HSPs: 44)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 47 - 144
Target Start/End: Complemental strand, 47078503 - 47078406
Alignment:
Q  47 actggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaacttggtt 144  Q
    ||||||||| ||||||||||| ||| |||| || |||||||||| |||||||||||| ||||| ||||||||||||||||||||||||||||||||||    
T  47078503 actggccaagcgttgttccccctgggaatcgaacccggtattccccgggtacgtccttggaaggagctccttgccactggaacccaagcaacttggtt 47078406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 40 - 144
Target Start/End: Complemental strand, 1446878 - 1446774
Alignment:
Q  40 catgcgtactggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaact 139  Q
    |||||| |||||||||  |||||||||| ||| |||| || |||||||||| ||| |||||||| ||||| ||||||||||||||||| |||||||||||    
T  1446878 catgcgcactggccaagtgttgttccccctgggaatcgaacccggtattccccggatacgtccttggaaggagctccttgccactggagcccaagcaact 1446779  T
Q  140 tggtt 144  Q
    |||||    
T  1446778 tggtt 1446774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 40 - 144
Target Start/End: Complemental strand, 24166502 - 24166398
Alignment:
Q  40 catgcgtactggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaact 139  Q
    |||||| ||||||||||||||||| ||||||| |||| || || ||||||| || ||||||||| ||||| ||||||||||||||||| ||||| |||||    
T  24166502 catgcgcactggccaaacgttgtttcccttgggaatcgaacccagtattccccgagtacgtccttggaaggagctccttgccactggagcccaatcaact 24166403  T
Q  140 tggtt 144  Q
    |||||    
T  24166402 tggtt 24166398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 40 - 144
Target Start/End: Complemental strand, 29895839 - 29895735
Alignment:
Q  40 catgcgtactggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaact 139  Q
    |||||| |||||||||  |||||||||| ||| |||| || |||||||||| ||| |||||||| ||||| ||||||||||||||||| |||||||||||    
T  29895839 catgcgcactggccaagtgttgttccccctgggaatcgaacccggtattccccggatacgtccttggaaggagctccttgccactggagcccaagcaact 29895740  T
Q  140 tggtt 144  Q
    |||||    
T  29895739 tggtt 29895735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 40 - 144
Target Start/End: Complemental strand, 53599112 - 53599008
Alignment:
Q  40 catgcgtactggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaact 139  Q
    |||||| ||||||||||||||||||| | ||| |||| || |||||||||| |||||||||||| ||||| |||||||||||| |||| ||||| |||||    
T  53599112 catgcgcactggccaaacgttgttcctcctgggaatcgaacccggtattccccgggtacgtccttggaaggagctccttgccaatggagcccaaacaact 53599013  T
Q  140 tggtt 144  Q
    |||||    
T  53599012 tggtt 53599008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 40 - 147
Target Start/End: Complemental strand, 2559359 - 2559252
Alignment:
Q  40 catgcgtactggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaact 139  Q
    |||||| ||||||||| ||||||||| | | |||||| ||||||||||||| | |||||||||| ||||| ||||| ||||||||||| ||||| |||||    
T  2559359 catgcgcactggccaagcgttgttcctcctagaaatcgaatccggtattccccaggtacgtccttggaaggagctcgttgccactggagcccaaacaact 2559260  T
Q  140 tggtttac 147  Q
    ||||||||    
T  2559259 tggtttac 2559252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 40 - 145
Target Start/End: Complemental strand, 55921086 - 55920981
Alignment:
Q  40 catgcgtactggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaact 139  Q
    |||||| |||| ||||  |||||||||| ||| |||| || |||||||||| ||||| |||||| ||||| ||||||||||||||||| |||||||||||    
T  55921086 catgcgcactgaccaagtgttgttccccctgggaatcgaacccggtattccccgggtgcgtccttggaaggagctccttgccactggagcccaagcaact 55920987  T
Q  140 tggttt 145  Q
    ||||||    
T  55920986 tggttt 55920981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 40 - 146
Target Start/End: Complemental strand, 38166079 - 38165973
Alignment:
Q  40 catgcgtactggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaact 139  Q
    |||||| ||||||||| ||||||||||| ||| |||| || || ||||||| ||| |||||||| ||||| |||||||||||| |||| ||||| |||||    
T  38166079 catgcgcactggccaagcgttgttccccctgggaatccaacccagtattccccggatacgtccttggaaggagctccttgccagtggagcccaaacaact 38165980  T
Q  140 tggttta 146  Q
    |||||||    
T  38165979 tggttta 38165973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 47 - 144
Target Start/End: Original strand, 41339461 - 41339558
Alignment:
Q  47 actggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaacttggtt 144  Q
    ||||||||| ||||||||||||||| | || || |||||||||  |||||||||||| ||||| |||||||||||||| || ||||| ||||||||||    
T  41339461 actggccaagcgttgttccccttgggagtcgaacccggtattctccgggtacgtccttggaaggagctccttgccactagagcccaaacaacttggtt 41339558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 39 - 144
Target Start/End: Complemental strand, 52950135 - 52950030
Alignment:
Q  39 tcatgcgtactggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaac 138  Q
    ||||||| ||||||||| ||||||||||| ||| |||| || ||| |||||| | |||||||||| ||||| |||||||||||||| || ||||| ||||    
T  52950135 tcatgcgcactggccaagcgttgttccccctgggaatcgaacccgatattccccaggtacgtccttggaaggagctccttgccactagagcccaaacaac 52950036  T
Q  139 ttggtt 144  Q
    ||||||    
T  52950035 ttggtt 52950030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 40 - 144
Target Start/End: Complemental strand, 6779263 - 6779159
Alignment:
Q  40 catgcgtactggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaact 139  Q
    |||||| ||||||||   |||||||||| ||| |||| || |||||||||  | |||||||||| ||||||||||||||||||||||| ||||| |||||    
T  6779263 catgcgcactggccaggtgttgttccccctgggaatcgaacccggtattctccaggtacgtccttggaagaagctccttgccactggagcccaaacaact 6779164  T
Q  140 tggtt 144  Q
    |||||    
T  6779163 tggtt 6779159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 52 - 149
Target Start/End: Original strand, 1940845 - 1940942
Alignment:
Q  52 ccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaacttggtttactt 149  Q
    |||| ||||||||||| ||| |||| || ||| |||| | |||||||||||| ||||| |||||||||||||| || ||||| |||||||||||||||    
T  1940845 ccaagcgttgttccccctgggaatcgaacccgatatttcccgggtacgtccttggaaggagctccttgccactagagcccaaacaacttggtttactt 1940942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 33 - 146
Target Start/End: Original strand, 27531710 - 27531822
Alignment:
Q  33 tccggctcatgcgtactggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaaccca 132  Q
    |||| |||||||| | ||||||| | |||||||| | |||| || || ||||||||||  ||||||||||| ||||| |||||||||||||||||  |||    
T  27531710 tccgactcatgcgcattggccaagcattgttcccatgggaa-tcgaacccggtattccctgggtacgtccttggaaggagctccttgccactggagtcca 27531808  T
Q  133 agcaacttggttta 146  Q
    ||||||||||||||    
T  27531809 agcaacttggttta 27531822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 81 - 141
Target Start/End: Original strand, 6032740 - 6032800
Alignment:
Q  81 ccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaacttg 141  Q
    |||||||||| |||||||||||| ||||| ||||||||||||||||| |||||||||||||    
T  6032740 ccggtattccccgggtacgtccttggaaggagctccttgccactggagcccaagcaacttg 6032800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 48 - 144
Target Start/End: Complemental strand, 27248472 - 27248376
Alignment:
Q  48 ctggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaacttggtt 144  Q
    |||||||| ||||||||| | ||| | || || |||||||||| ||| |||||||| ||||| ||||| ||||||||||| ||||||||||||||||    
T  27248472 ctggccaagcgttgttcctcctgggactcgaacccggtattccccggatacgtccttggaaggagctcgttgccactggagcccaagcaacttggtt 27248376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 40 - 145
Target Start/End: Original strand, 3574505 - 3574610
Alignment:
Q  40 catgcgtactggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaact 139  Q
    |||||| |||||||||  ||||||| || ||| |||  ||  |||||||||   |||||||||| ||||| ||||||||||||||||| |||||||||||    
T  3574505 catgcgcactggccaagtgttgttctccctgggaattgaactcggtattccctaggtacgtccttggaaggagctccttgccactggagcccaagcaact 3574604  T
Q  140 tggttt 145  Q
    ||||||    
T  3574605 tggttt 3574610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 47 - 144
Target Start/End: Complemental strand, 33647766 - 33647669
Alignment:
Q  47 actggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaacttggtt 144  Q
    ||||| ||| |||||||| || |||||||| || |||||||||| | | |||||||| | ||| |||||||||||||| || ||||||||||||||||    
T  33647766 actggtcaagcgttgttctccctggaaatcgaacccggtattccccagatacgtccttgaaaggagctccttgccactagagcccaagcaacttggtt 33647669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 47 - 144
Target Start/End: Original strand, 41162948 - 41163045
Alignment:
Q  47 actggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaacttggtt 144  Q
    |||||||||  |||||||||  |||||||| ||  ||||||| | ||| |||||||| ||||| ||||||||| ||||||| ||||||||||||||||    
T  41162948 actggccaagtgttgttccctctggaaatcgaactcggtatttcccggatacgtccttggaaggagctccttgtcactggagcccaagcaacttggtt 41163045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 41 - 145
Target Start/End: Complemental strand, 13073589 - 13073485
Alignment:
Q  41 atgcgtactggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaactt 140  Q
    ||||| ||||||||||| ||||||||| ||| |||| ||  ||||||||  | |||||||||| ||||| ||||| |||||||| || ||||| ||||||    
T  13073589 atgcgcactggccaaacattgttccccatgggaatcgaactcggtattctccaggtacgtccttggaaggagctcattgccactagagcccaaacaactt 13073490  T
Q  141 ggttt 145  Q
    |||||    
T  13073489 ggttt 13073485  T

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Target: chr4; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 40 - 144
Target Start/End: Original strand, 49260724 - 49260828
Alignment:
Q  40 catgcgtactggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaact 139  Q
    |||||| ||||||||| ||||||||||||||| |||  ||| | ||||||| ||| ||| |||| ||||| || ||||||||| || || ||||||||||    
T  49260724 catgcgcactggccaagcgttgttccccttgggaattgaattcagtattccccggatacatccttggaaggagttccttgccattgaaatccaagcaact 49260823  T
Q  140 tggtt 144  Q
    |||||    
T  49260824 tggtt 49260828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 86 - 145
Target Start/End: Complemental strand, 14567257 - 14567198
Alignment:
Q  86 attccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaacttggttt 145  Q
    ||||| |||||||||||| ||||  ||||||||||||||||| |||||||||||||||||    
T  14567257 attccccgggtacgtccttggaatgagctccttgccactggagcccaagcaacttggttt 14567198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 81 - 144
Target Start/End: Original strand, 34667702 - 34667765
Alignment:
Q  81 ccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaacttggtt 144  Q
    |||||||||| |||||||||||| ||||| |||||||||||||| || ||||| ||||||||||    
T  34667702 ccggtattccccgggtacgtccttggaaggagctccttgccactagagcccaaacaacttggtt 34667765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 47 - 144
Target Start/End: Original strand, 12703611 - 12703708
Alignment:
Q  47 actggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaacttggtt 144  Q
    ||||| ||| ||||||||||  |||||||| ||  | ||||||| || |||||||||  |||| | ||||||||||||||| ||||||||||||||||    
T  12703611 actggtcaagcgttgttcccactggaaatcgaactcagtattcctcgagtacgtcctttgaaggatctccttgccactggagcccaagcaacttggtt 12703708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 40 - 145
Target Start/End: Complemental strand, 14124068 - 14123963
Alignment:
Q  40 catgcgtactggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaact 139  Q
    |||||| |||||||||| |||||||||| ||| |||| || | |||||||| |  |||||| || ||||| |||| ||||||| |||| ||||| |||||    
T  14124068 catgcgcactggccaaatgttgttccccctgggaatcgaacctggtattcctcaagtacgttcttggaaggagcttcttgccattggagcccaaacaact 14123969  T
Q  140 tggttt 145  Q
    ||||||    
T  14123968 tggttt 14123963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 47 - 144
Target Start/End: Original strand, 19651511 - 19651608
Alignment:
Q  47 actggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaacttggtt 144  Q
    ||||||| ||| ||||||  ||| |||||| ||| ||||||||  ||| |||||||| ||||| ||||| ||||||||||| ||||| ||||||||||    
T  19651511 actggccgaacattgttcggctttgaaatcgaattcggtattcttcggatacgtccttggaaggagctcattgccactggagcccaaacaacttggtt 19651608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 40 - 144
Target Start/End: Complemental strand, 43458665 - 43458561
Alignment:
Q  40 catgcgtactggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaact 139  Q
    |||||| ||||||||| |||| |||| | ||| |||| ||||| ||||||| |   |||||||| ||||  |||| |||||||||||| |||||||||||    
T  43458665 catgcgcactggccaagcgttcttcctcctgggaatcgaatccagtattccccaaatacgtccttggaatgagcttcttgccactggagcccaagcaact 43458566  T
Q  140 tggtt 144  Q
    |||||    
T  43458565 tggtt 43458561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 47 - 122
Target Start/End: Complemental strand, 38168302 - 38168227
Alignment:
Q  47 actggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgcca 122  Q
    ||||||||| ||||||||| ||| | |||| || | |||||||| |||||||||||| ||||| ||||||||||||    
T  38168302 actggccaagcgttgttcctcttaggaatcgaacctggtattccccgggtacgtccttggaaggagctccttgcca 38168227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 40 - 146
Target Start/End: Original strand, 295592 - 295697
Alignment:
Q  40 catgcgtactggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaact 139  Q
    |||||| ||||||||||||||||||| | ||| |||| |||| |||||||| ||| ||||||||  ||||  | |||||||||||||| ||||| ||| |    
T  295592 catgcgcactggccaaacgttgttcctc-tgggaatcgaatctggtattccccggatacgtccttagaaggtgttccttgccactggagcccaaacaatt 295690  T
Q  140 tggttta 146  Q
    || ||||    
T  295691 tgattta 295697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 40 - 146
Target Start/End: Original strand, 5472907 - 5473013
Alignment:
Q  40 catgcgtactggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaact 139  Q
    |||||| ||||||||| ||||||| ||| ||  |||| || | |||||||| ||| |||||||| | ||  ||||||||||||||||| ||||| |||||    
T  5472907 catgcgcactggccaagcgttgtttcccctgagaatcaaacctggtattccccggatacgtccttgaaatgagctccttgccactggagcccaaacaact 5473006  T
Q  140 tggttta 146  Q
    | |||||    
T  5473007 tagttta 5473013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 47 - 127
Target Start/End: Original strand, 36262833 - 36262911
Alignment:
Q  47 actggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactgga 127  Q
    ||||||||| ||||||||||  ||| |||| || |||||||||  |||||||||||| ||||| |||| ||||||||||||    
T  36262833 actggccaagcgttgttccc--tgggaatcgaacccggtattctccgggtacgtccttggaaggagcttcttgccactgga 36262911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 40 - 144
Target Start/End: Complemental strand, 8889074 - 8888970
Alignment:
Q  40 catgcgtactggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaact 139  Q
    |||||| |||| ||||  |||||||||| | | |||| || |||||||||| ||| ||||||||  |||| ||||||||||| || || ||||| |||||    
T  8889074 catgcgcactgcccaagtgttgttccccctaggaatcgaacccggtattccccggatacgtccttagaaggagctccttgccgctagagcccaaacaact 8888975  T
Q  140 tggtt 144  Q
    |||||    
T  8888974 tggtt 8888970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 138
Target Start/End: Complemental strand, 13552184 - 13552068
Alignment:
Q  22 tggatgattaatccggctcatgcgtactggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgcc 121  Q
    ||||||| ||||||||||||||||||  ||  ||  |||||||| | ||  |||| || ||| |||||| ||| ||||| || ||||| |||||||||||    
T  13552184 tggatgactaatccggctcatgcgtagaggttaagtgttgttcctcctgagaatcgaacccgatattccccggatacgtgcttggaaggagctccttgcc 13552085  T
Q  122 actggaacccaagcaac 138  Q
    |||||| ||||| ||||    
T  13552084 actggagcccaaacaac 13552068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 40 - 144
Target Start/End: Original strand, 20532468 - 20532572
Alignment:
Q  40 catgcgtactggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaact 139  Q
    |||||| ||||||||| ||||||||| | |||||||| ||  ||||||||  |||||| | ||| ||||  ||| |||||||||||||  |||||||| |    
T  20532468 catgcgcactggccaagcgttgttcctcctggaaatcgaactcggtattctccgggtatggccttggaatgagcaccttgccactggagtccaagcaatt 20532567  T
Q  140 tggtt 144  Q
    |||||    
T  20532568 tggtt 20532572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 40 - 144
Target Start/End: Original strand, 26480008 - 26480112
Alignment:
Q  40 catgcgtactggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaact 139  Q
    ||||||||||||||||  ||| ||||||||   |||| ||  ||||||||| |  |||||| || ||||| |||||||||||| |||| ||||| |||||    
T  26480008 catgcgtactggccaagtgttattccccttaagaatcgaactcggtattccccatgtacgtacttggaaggagctccttgccagtggagcccaaacaact 26480107  T
Q  140 tggtt 144  Q
    |||||    
T  26480108 tggtt 26480112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 40 - 127
Target Start/End: Original strand, 15839994 - 15840080
Alignment:
Q  40 catgcgtactggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactgga 127  Q
    |||||| |||||||||||||| |||  || |||| || || |||||||||| |  ||||||||| ||||| |||||||||||||||||    
T  15839994 catgcgcactggccaaacgttattcttctaggaa-tcgaacccggtattccccaagtacgtccttggaaggagctccttgccactgga 15840080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 40 - 139
Target Start/End: Complemental strand, 20421825 - 20421727
Alignment:
Q  40 catgcgtactggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaact 139  Q
    |||||| |||||||||  |||||||||| |||||||| || || ||||||| | | |||||| | | ||| ||||||||||||||| | |||||||||||    
T  20421825 catgcgcactggccaagtgttgttccccctggaaatcgaa-ccagtattccccagatacgtctttgaaaggagctccttgccactgaagcccaagcaact 20421727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 40 - 123
Target Start/End: Original strand, 36145274 - 36145357
Alignment:
Q  40 catgcgtactggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccac 123  Q
    |||||| ||||  ||| ||||||| ||| ||| |||| || |||||||||| |||||||||||| ||||  |||||||||||||    
T  36145274 catgcgcactgatcaagcgttgtttcccctgggaatcgaacccggtattccccgggtacgtccttggaatgagctccttgccac 36145357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 40 - 139
Target Start/End: Original strand, 40272390 - 40272489
Alignment:
Q  40 catgcgtactggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaact 139  Q
    |||||| ||||||||| ||||||||||| |||||||| || ||| |||||| ||| ||| || | ||||  |||||||| |||| ||| ||||| |||||    
T  40272390 catgcgcactggccaagcgttgttccccatggaaatcgaacccgatattccccggatacatcattggaaagagctccttaccaccggagcccaaacaact 40272489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 40 - 127
Target Start/End: Original strand, 42722636 - 42722723
Alignment:
Q  40 catgcgtactggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactgga 127  Q
    |||||| ||||||||| ||||||||| | ||| |||  || |||||||| | |||||||||||| ||||| |||||||  ||||||||    
T  42722636 catgcgcactggccaagcgttgttcctcctgggaattgaacccggtatttcccgggtacgtccttggaaggagctcctaaccactgga 42722723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 47 - 145
Target Start/End: Original strand, 15732514 - 15732612
Alignment:
Q  47 actggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaacttggttt 145  Q
    |||||||||  |||||||||| |   |||| || |||||||||  ||| |||||||| |||||||  | |||||||||||| ||||| |||||||||||    
T  15732514 actggccaagtgttgttccccatatgaatcgaacccggtattctccggatacgtccttggaagaattttcttgccactggagcccaaacaacttggttt 15732612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 47 - 109
Target Start/End: Complemental strand, 43468392 - 43468330
Alignment:
Q  47 actggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaag 109  Q
    ||||||||| ||||||||||| ||| |||| || |||||||||| ||||||||| || |||||    
T  43468392 actggccaagcgttgttccccctgggaatcgaacccggtattccccgggtacgttcttggaag 43468330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 109
Target Start/End: Original strand, 3159528 - 3159597
Alignment:
Q  40 catgcgtactggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaag 109  Q
    |||||| ||||||||| ||||||||||| ||||| || || |||||||||  ||| |||||||| |||||    
T  3159528 catgcgcactggccaagcgttgttccccctggaagtcgaacccggtattctccggatacgtccttggaag 3159597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 141
Target Start/End: Complemental strand, 29588788 - 29588687
Alignment:
Q  40 catgcgtactggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaact 139  Q
    |||||| ||| ||||| | ||||| ||| ||| |||| || |||||||| | |||| ||||| | ||||  ||||||||||||||||| ||||| |||||    
T  29588788 catgcgcactagccaagctttgtttcccctgggaatcgaacccggtatttcccgggcacgtctttggaatgagctccttgccactggagcccaatcaact 29588689  T
Q  140 tg 141  Q
    ||    
T  29588688 tg 29588687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 96 - 144
Target Start/End: Complemental strand, 15829695 - 15829647
Alignment:
Q  96 tacgtcctgggaagaagctccttgccactggaacccaagcaacttggtt 144  Q
    |||||||| | ||||||||||||| ||||||| ||||| ||||||||||    
T  15829695 tacgtccttgaaagaagctccttgtcactggagcccaaacaacttggtt 15829647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 63; Significance: 3e-27; HSPs: 39)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 40 - 146
Target Start/End: Original strand, 2467177 - 2467283
Alignment:
Q  40 catgcgtactggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaact 139  Q
    |||||| |||||||||  |||||||||| |||||||| || |||||||||| ||| |||||||| ||||| ||||||||||||||||| |||||||||||    
T  2467177 catgcgcactggccaagagttgttccccctggaaatcgaacccggtattccccggatacgtccttggaaggagctccttgccactggagcccaagcaact 2467276  T
Q  140 tggttta 146  Q
    |||||||    
T  2467277 tggttta 2467283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 40 - 144
Target Start/End: Original strand, 1013036 - 1013140
Alignment:
Q  40 catgcgtactggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaact 139  Q
    |||| ||||||||||| ||||||||||| ||| |||| || |||||||||| ||| |||||||| |||| |||||||||||||||||| |||||||||||    
T  1013036 catgtgtactggccaagcgttgttccccctgggaatcgaacccggtattccccggatacgtccttggaaaaagctccttgccactggagcccaagcaact 1013135  T
Q  140 tggtt 144  Q
    |||||    
T  1013136 tggtt 1013140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 40 - 144
Target Start/End: Original strand, 38922473 - 38922577
Alignment:
Q  40 catgcgtactggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaact 139  Q
    |||||| ||||||||| ||||||||||  ||| |||| || |||||||||| |||||||||||| ||||| ||||||||||||||||| |||||||||||    
T  38922473 catgcgcactggccaagcgttgttccctctgggaatcgaacccggtattccccgggtacgtccttggaaggagctccttgccactggagcccaagcaact 38922572  T
Q  140 tggtt 144  Q
    |||||    
T  38922573 tggtt 38922577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 40 - 144
Target Start/End: Complemental strand, 8141153 - 8141049
Alignment:
Q  40 catgcgtactggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaact 139  Q
    |||||| ||||||||| ||||||| ||| |||||||| || |||||||||| ||  |||||||| ||||| ||||||||||||||||| ||||| |||||    
T  8141153 catgcgcactggccaagcgttgtttcccctggaaatcgaacccggtattccccgaatacgtccttggaagcagctccttgccactggagcccaaacaact 8141054  T
Q  140 tggtt 144  Q
    |||||    
T  8141053 tggtt 8141049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 40 - 144
Target Start/End: Complemental strand, 10927657 - 10927553
Alignment:
Q  40 catgcgtactggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaact 139  Q
    |||||| ||||||||| ||||||||| | | | |||| || |||||||||| |||||||||||| | ||||||||||||||||||| | |||||||||||    
T  10927657 catgcgcactggccaagcgttgttcctcctaggaatcgaacccggtattccccgggtacgtccttgaaagaagctccttgccactgaagcccaagcaact 10927558  T
Q  140 tggtt 144  Q
    |||||    
T  10927557 tggtt 10927553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 47 - 146
Target Start/End: Complemental strand, 24837286 - 24837187
Alignment:
Q  47 actggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaacttggttta 146  Q
    ||||||||| |||||||| || ||| |||| ||  ||||||||| ||||||||| || ||||| ||||||||||||||||| ||||||||||||||||||    
T  24837286 actggccaagcgttgttctccctgggaatcgaacacggtattccccgggtacgtacttggaaggagctccttgccactggagcccaagcaacttggttta 24837187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 47 - 144
Target Start/End: Original strand, 44893344 - 44893441
Alignment:
Q  47 actggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaacttggtt 144  Q
    ||||||||| | ||||||||| | |||||  || |||||||||| |||||||||||| ||||| ||||||||||||||||| ||||| ||||||||||    
T  44893344 actggccaagcattgttccccctagaaattgaacccggtattccccgggtacgtccttggaaggagctccttgccactggagcccaaacaacttggtt 44893441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 40 - 144
Target Start/End: Original strand, 14666130 - 14666234
Alignment:
Q  40 catgcgtactggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaact 139  Q
    |||||| |||||||||  |||||| ||| ||| |||| || |||||||||| ||| |||||||| ||||  ||||||||||||||||| |||||||||||    
T  14666130 catgcgcactggccaagtgttgtttcccctgggaatcgaacccggtattccccggatacgtccttggaatgagctccttgccactggagcccaagcaact 14666229  T
Q  140 tggtt 144  Q
    |||||    
T  14666230 tggtt 14666234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 40 - 144
Target Start/End: Complemental strand, 34846864 - 34846761
Alignment:
Q  40 catgcgtactggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaact 139  Q
    ||||| |||||||||| |||||||| || ||| |||| || |||||||||| |||||||||||| ||||  ||||||||||||||||| ||||| |||||    
T  34846864 catgcatactggccaagcgttgttcaccatgggaatcgaacccggtattcc-cgggtacgtccttggaatgagctccttgccactggagcccaaacaact 34846766  T
Q  140 tggtt 144  Q
    |||||    
T  34846765 tggtt 34846761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 47 - 144
Target Start/End: Complemental strand, 11785959 - 11785864
Alignment:
Q  47 actggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaacttggtt 144  Q
    |||| |||||||||| ||||||||||| || ||||||||||||| |||||||||||| ||||  ||||||||| ||||||| |||| |||||||||||    
T  11785959 actgcccaaacgttgctccccttggaa-tcgaatccggtattccccgggtacgtccttggaatgagctccttg-cactggagcccatgcaacttggtt 11785864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 40 - 144
Target Start/End: Complemental strand, 6100523 - 6100419
Alignment:
Q  40 catgcgtactggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaact 139  Q
    |||||| ||||||||| ||||||||| | ||| |||| || |||||||||| ||| |||||||| | ||| ||||||||||||||| | ||||| |||||    
T  6100523 catgcgcactggccaagcgttgttcctcctgggaatcgaacccggtattccccggatacgtccttgaaaggagctccttgccactgaagcccaaacaact 6100424  T
Q  140 tggtt 144  Q
    |||||    
T  6100423 tggtt 6100419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 58 - 146
Target Start/End: Complemental strand, 17981474 - 17981386
Alignment:
Q  58 gttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaacttggttta 146  Q
    |||||||||| ||| |||| || |||||||| | ||||||| |||| ||||| ||||||||||||||||| |||||||||||| |||||    
T  17981474 gttgttccccctgggaatcgaacccggtatttcccgggtacatccttggaaggagctccttgccactggagcccaagcaacttagttta 17981386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 40 - 146
Target Start/End: Original strand, 15884615 - 15884720
Alignment:
Q  40 catgcgtactggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaact 139  Q
    |||||| ||| |||||  ||||||||||| |||| || || |||||||||| | |||||||||| ||||| |||||||| |||||||| ||||| |||||    
T  15884615 catgcgcacttgccaagtgttgttcccctgggaa-tcgaacccggtattccccaggtacgtccttggaaggagctccttaccactggagcccaatcaact 15884713  T
Q  140 tggttta 146  Q
    |||||||    
T  15884714 tggttta 15884720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 40 - 141
Target Start/End: Original strand, 4479355 - 4479455
Alignment:
Q  40 catgcgtactggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaact 139  Q
    |||||| ||||||||| |||||||||||| |||| || |||||||||||| || |||||||||| | ||| | || |||||||||| ||||||| |||||    
T  4479355 catgcgcactggccaagcgttgttcccctgggaa-tcgaatccggtattctacaggtacgtccttgaaaggaacttcttgccactgaaacccaaacaact 4479453  T
Q  140 tg 141  Q
    ||    
T  4479454 tg 4479455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 47 - 144
Target Start/End: Original strand, 9860061 - 9860159
Alignment:
Q  47 actggccaaacgttgttccccttggaaatctaatccggtattccacggg-tacgtcctgggaagaagctccttgccactggaacccaagcaacttggtt 144  Q
    |||||||||  |||||||||| ||| |||| || |||||||||| | || |||||||| ||||| ||||| ||||||||||| ||||| ||||||||||    
T  9860061 actggccaagtgttgttccccctgggaatcgaacccggtattcccccggatacgtccttggaaggagctctttgccactggatcccaaacaacttggtt 9860159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 58 - 140
Target Start/End: Original strand, 33401876 - 33401958
Alignment:
Q  58 gttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaactt 140  Q
    |||||||||| || ||||| || |||||||||| || ||||||||| | ||| ||||||||||||||||| ||||| ||||||    
T  33401876 gttgttccccctgaaaatcgaacccggtattccccgagtacgtccttgaaaggagctccttgccactggagcccaaacaactt 33401958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 58 - 144
Target Start/End: Complemental strand, 45521201 - 45521116
Alignment:
Q  58 gttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaacttggtt 144  Q
    ||||||||||| |||| || || |||||||||| ||||||| |||| ||||  | ||||||||||||||| ||||||||||||||||    
T  45521201 gttgttcccctgggaa-tcgaacccggtattccccgggtacatccttggaatgaactccttgccactggagcccaagcaacttggtt 45521116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 40 - 145
Target Start/End: Original strand, 8997603 - 8997708
Alignment:
Q  40 catgcgtactggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaact 139  Q
    |||||| |||||| |||||||||||||||| | |||| ||  ||||||||| ||  || ||||| | ||| || ||||||||||||||  ||||||||||    
T  8997603 catgcgaactggcgaaacgttgttccccttaggaatcgaacacggtattccccgaatatgtccttgaaaggagttccttgccactggagtccaagcaact 8997702  T
Q  140 tggttt 145  Q
    ||||||    
T  8997703 tggttt 8997708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 47 - 144
Target Start/End: Complemental strand, 13085568 - 13085471
Alignment:
Q  47 actggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaacttggtt 144  Q
    |||||| |||||||||||||  ||  |||| || |||||||||| ||| |||||||| ||||| ||||||| ||||||||| ||||| ||| ||||||    
T  13085568 actggctaaacgttgttccctctgagaatcgaacccggtattccccggatacgtccttggaaggagctcctcgccactggagcccaaacaagttggtt 13085471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 83 - 144
Target Start/End: Complemental strand, 18091409 - 18091348
Alignment:
Q  83 ggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaacttggtt 144  Q
    |||||| ||||||| |||||| |||| |||||||||||||||||| ||||| ||||||||||    
T  18091409 ggtatttcacgggtgcgtccttggaataagctccttgccactggagcccaaacaacttggtt 18091348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 49 - 149
Target Start/End: Complemental strand, 2964118 - 2964018
Alignment:
Q  49 tggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaacttggtttact 148  Q
    ||||||| ||||||||| | | | |||| ||  ||||||||| ||||||||| || ||||| |||| ||||||||| ||  |||||||||||||||||||    
T  2964118 tggccaagcgttgttcctcatcggaatcgaacacggtattccccgggtacgttcttggaaggagctacttgccactagagtccaagcaacttggtttact 2964019  T
Q  149 t 149  Q
    |    
T  2964018 t 2964018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 73 - 141
Target Start/End: Complemental strand, 38235923 - 38235855
Alignment:
Q  73 aatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaacttg 141  Q
    |||| ||||||||| | | | |||||||||| |||||||| |||||||||||||| |||||||||||||    
T  38235923 aatcgaatccggtacttcccaggtacgtccttggaagaagttccttgccactggagcccaagcaacttg 38235855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 40 - 147
Target Start/End: Complemental strand, 16893988 - 16893881
Alignment:
Q  40 catgcgtactggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaact 139  Q
    |||| ||||||||||| |||| |||||| ||  |||| || ||| |||||| ||| |||||| | ||||| || |||||||||||  | |||||||||||    
T  16893988 catgtgtactggccaagcgttattccccctgtgaatcgaacccgatattccccggatacgtcattggaaggagttccttgccactatagcccaagcaact 16893889  T
Q  140 tggtttac 147  Q
    ||||||||    
T  16893888 tggtttac 16893881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 40 - 144
Target Start/End: Complemental strand, 583863 - 583761
Alignment:
Q  40 catgcgtactggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaact 139  Q
    |||||| ||||| ||| ||||||||||  | | |||| || |||||||| | || ||||||||| ||||| |||||||||||||| || ||||| |||||    
T  583863 catgcgcactggtcaagcgttgttccc--taggaatcgaacccggtatttctcgagtacgtccttggaagtagctccttgccactagagcccaaacaact 583766  T
Q  140 tggtt 144  Q
    |||||    
T  583765 tggtt 583761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 40 - 96
Target Start/End: Complemental strand, 6042872 - 6042816
Alignment:
Q  40 catgcgtactggccaaacgttgttccccttggaaatctaatccggtattccacgggt 96  Q
    |||||| ||||||||| ||||||||||||||| |||| || |||||||||| |||||    
T  6042872 catgcgcactggccaagcgttgttccccttgggaatcgaacccggtattccccgggt 6042816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 84 - 144
Target Start/End: Original strand, 10535506 - 10535566
Alignment:
Q  84 gtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaacttggtt 144  Q
    ||||||| ||| |||||||| ||||| |||||||||||||||||  |||| ||||||||||    
T  10535506 gtattcctcggatacgtccttggaaggagctccttgccactggagtccaaacaacttggtt 10535566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 40 - 144
Target Start/End: Complemental strand, 14846626 - 14846523
Alignment:
Q  40 catgcgtactggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaact 139  Q
    |||||| |||| |||| | ||||||||||  ||| || || |||||||||| ||||||||||||  |||| |||| ||||||| |||| ||||| |||||    
T  14846626 catgcgcactgaccaatcattgttcccctgagaa-tcgaacccggtattccccgggtacgtccttagaaggagcttcttgccagtggagcccaaacaact 14846528  T
Q  140 tggtt 144  Q
    |||||    
T  14846527 tggtt 14846523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 40 - 144
Target Start/End: Original strand, 33935794 - 33935898
Alignment:
Q  40 catgcgtactggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaact 139  Q
    |||||| |||||||||  ||||||| || | | |||| |||||||||||||  |||||| ||||   ||| |||||||||| |||||| ||||| |||||    
T  33935794 catgcgcactggccaagtgttgttctccctaggaatcgaatccggtattccttgggtacatccttaaaaggagctccttgcaactggagcccaaacaact 33935893  T
Q  140 tggtt 144  Q
    |||||    
T  33935894 tggtt 33935898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 40 - 144
Target Start/End: Original strand, 34613837 - 34613941
Alignment:
Q  40 catgcgtactggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaact 139  Q
    ||||||||||||||| |||||||||| | ||| |||| || ||| |||||| ||| ||||   | ||||| ||||| ||||||||||| ||||| ||| |    
T  34613837 catgcgtactggccagacgttgttcctcctgggaatcgaacccgatattccccggatacggttttggaaggagctcattgccactggagcccaaacaatt 34613936  T
Q  140 tggtt 144  Q
    |||||    
T  34613937 tggtt 34613941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 40 - 146
Target Start/End: Original strand, 68157 - 68263
Alignment:
Q  40 catgcgtactggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaact 139  Q
    ||||| |||||||||||||||||||| | ||  |||| || ||| | |||| || | ||||||| ||||| ||||||||||||| ||| | ||| |||||    
T  68157 catgcatactggccaaacgttgttcctcctgagaatcgaacccgatcttccccgagcacgtccttggaaggagctccttgccaccggagctcaaacaact 68256  T
Q  140 tggttta 146  Q
    || ||||    
T  68257 tgattta 68263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 40 - 146
Target Start/End: Original strand, 3418572 - 3418678
Alignment:
Q  40 catgcgtactggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaact 139  Q
    |||||| |||||||||  |||||||| | |  ||||| || ||| |||||| | | |||||||| ||||| ||||||||||||| |||  |||| |||||    
T  3418572 catgcgcactggccaagtgttgttcctcctaaaaatcgaacccgatattccccagatacgtccttggaaggagctccttgccacgggagtccaaacaact 3418671  T
Q  140 tggttta 146  Q
    |||||||    
T  3418672 tggttta 3418678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 72 - 146
Target Start/End: Complemental strand, 30903355 - 30903281
Alignment:
Q  72 aaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaacttggttta 146  Q
    ||||| ||||||||||||| ||  |||||| | |||||||||||||| | |||||| | ||| ||||||||||||    
T  30903355 aaatcgaatccggtattccccgaatacgtcattggaagaagctccttactactggagcgcaaacaacttggttta 30903281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 146
Target Start/End: Complemental strand, 6940608 - 6940503
Alignment:
Q  41 atgcgtactggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaactt 140  Q
    ||||| ||| ||||| ||||||||| | |||||||| || ||| ||||   ||| ||| |||| ||||  |||||||| |||||||| ||||| ||||||    
T  6940608 atgcgcactagccaagcgttgttccacctggaaatcgaacccgatattttccggatacctccttggaatgagctccttaccactggagcccaaacaactt 6940509  T
Q  141 ggttta 146  Q
    ||||||    
T  6940508 ggttta 6940503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 83 - 144
Target Start/End: Original strand, 24938664 - 24938725
Alignment:
Q  83 ggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaacttggtt 144  Q
    |||||||  |||||| ||||| ||| | ||||||||||||||||| ||||| ||||||||||    
T  24938664 ggtattctccgggtatgtccttggagggagctccttgccactggagcccaaacaacttggtt 24938725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 141
Target Start/End: Original strand, 34710626 - 34710727
Alignment:
Q  40 catgcgtactggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaact 139  Q
    |||||| ||| |||||  |||||| ||| ||| |||| |||||||||||   || ||||||||| ||||||| || |||||||| ||| ||||| |||||    
T  34710626 catgcgcactagccaagtgttgtttcccctgggaatcgaatccggtattttccgagtacgtccttggaagaaacttcttgccaccggagcccaaacaact 34710725  T
Q  140 tg 141  Q
    ||    
T  34710726 tg 34710727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 47 - 124
Target Start/End: Original strand, 44031506 - 44031583
Alignment:
Q  47 actggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccact 124  Q
    ||||||||| ||||||||||| |||||||| || ||| |||| | ||| ||| |||| ||||| || |||||||||||    
T  44031506 actggccaagcgttgttccccctggaaatcgaacccgatatttcccggttacatccttggaaggagttccttgccact 44031583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 96 - 144
Target Start/End: Original strand, 7673769 - 7673816
Alignment:
Q  96 tacgtcctgggaagaagctccttgccactggaacccaagcaacttggtt 144  Q
    |||||||| ||||| |||||||||||||||| | |||||||||||||||    
T  7673769 tacgtccttggaaggagctccttgccactgg-agccaagcaacttggtt 7673816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 84 - 144
Target Start/End: Complemental strand, 17845740 - 17845680
Alignment:
Q  84 gtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaacttggtt 144  Q
    ||||||| || |||| |||| ||||| ||||| ||||||||||| ||||| ||||||||||    
T  17845740 gtattccccgagtacatccttggaaggagctcattgccactggagcccaaacaacttggtt 17845680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 96 - 144
Target Start/End: Complemental strand, 22810075 - 22810027
Alignment:
Q  96 tacgtcctgggaagaagctccttgccactggaacccaagcaacttggtt 144  Q
    |||||||| ||||| |||||||||||||| || ||||| ||||||||||    
T  22810075 tacgtccttggaaggagctccttgccactagagcccaaacaacttggtt 22810027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 62; Significance: 1e-26; HSPs: 40)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 40 - 145
Target Start/End: Original strand, 5731979 - 5732084
Alignment:
Q  40 catgcgtactggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaact 139  Q
    |||||| ||||||||| ||||||||| | ||| |||| || |||||||||| |||||||||||| ||||| ||||||||||||||||| |||||||||||    
T  5731979 catgcgcactggccaagcgttgttcctcctgggaatcgaacccggtattccccgggtacgtccttggaaggagctccttgccactggagcccaagcaact 5732078  T
Q  140 tggttt 145  Q
    ||||||    
T  5732079 tggttt 5732084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 40 - 144
Target Start/End: Complemental strand, 19572772 - 19572668
Alignment:
Q  40 catgcgtactggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaact 139  Q
    |||||| |||||||||  |||||||||| ||| ||||||| |||||||||| ||| |||||||| ||||| ||||||||||||||||| |||||||||||    
T  19572772 catgcgcactggccaagtgttgttccccctgggaatctaacccggtattccccggatacgtccttggaaggagctccttgccactggagcccaagcaact 19572673  T
Q  140 tggtt 144  Q
    |||||    
T  19572672 tggtt 19572668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 40 - 145
Target Start/End: Complemental strand, 28857176 - 28857071
Alignment:
Q  40 catgcgtactggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaact 139  Q
    |||||| |||||||||  |||||||||| ||| |||| || |||||||||| ||||| |||||| ||||| ||||||||||||||||| |||||||||||    
T  28857176 catgcgcactggccaagtgttgttccccctgggaatcgaacccggtattccccgggtgcgtccttggaaggagctccttgccactggagcccaagcaact 28857077  T
Q  140 tggttt 145  Q
    ||||||    
T  28857076 tggttt 28857071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 40 - 144
Target Start/End: Complemental strand, 42086375 - 42086271
Alignment:
Q  40 catgcgtactggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaact 139  Q
    |||||| ||||| ||| ||||||||||| ||| |||| || |||||||||| |||||||||||| ||||| ||||||||||||| ||| |||||||||||    
T  42086375 catgcgcactggtcaagcgttgttccccctgggaatcgaacccggtattcctcgggtacgtccttggaaggagctccttgccaccggagcccaagcaact 42086276  T
Q  140 tggtt 144  Q
    |||||    
T  42086275 tggtt 42086271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 47 - 149
Target Start/End: Complemental strand, 7866622 - 7866520
Alignment:
Q  47 actggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaacttggttta 146  Q
    ||||||||| ||||||||| | | | |||| || |||||||||| |||||||||||| ||||| |||||||||||||||||  |||||||||||||||||    
T  7866622 actggccaagcgttgttcctcctcggaatcgaacccggtattcctcgggtacgtccttggaaggagctccttgccactggagtccaagcaacttggttta 7866523  T
Q  147 ctt 149  Q
    |||    
T  7866522 ctt 7866520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 47 - 145
Target Start/End: Original strand, 41163526 - 41163623
Alignment:
Q  47 actggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaacttggttt 145  Q
    |||||||||||||||||||||| |||| || || |||||||||| ||||||||| || ||||| ||||||||||||||||| ||||| |||||||||||    
T  41163526 actggccaaacgttgttcccctgggaa-tcgaacccggtattccccgggtacgttcttggaaggagctccttgccactggagcccaaacaacttggttt 41163623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 40 - 146
Target Start/End: Original strand, 20682676 - 20682783
Alignment:
Q  40 catgcgtactggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaa-gaagctccttgccactggaacccaagcaac 138  Q
    |||||| ||||||||| ||||||||||| ||||||||||| ||  |||||| ||||||||||||  ||| | ||||||||| ||||||| ||||||||||    
T  20682676 catgcgcactggccaagcgttgttccccctggaaatctaacccaatattccccgggtacgtccttagaatggagctccttgtcactggagcccaagcaac 20682775  T
Q  139 ttggttta 146  Q
    ||||||||    
T  20682776 ttggttta 20682783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 47 - 149
Target Start/End: Complemental strand, 9812913 - 9812811
Alignment:
Q  47 actggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaacttggttta 146  Q
    ||||||||| ||||||||| | | | |||| || |||||||||| |||||||||||| ||||| |||||||||||||||||  |||| ||||||||||||    
T  9812913 actggccaagcgttgttcctcctcggaatcgaacccggtattccccgggtacgtccttggaaggagctccttgccactggagtccaaacaacttggttta 9812814  T
Q  147 ctt 149  Q
    |||    
T  9812813 ctt 9812811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 40 - 146
Target Start/End: Complemental strand, 30349627 - 30349521
Alignment:
Q  40 catgcgtactggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaact 139  Q
    |||||| ||||||||| | ||||||||| | |||||| || |||||||||| ||| |||||||| ||||| | ||||||||||||||| ||||| |||||    
T  30349627 catgcgcactggccaatcattgttccccctagaaatcaaacccggtattccccggatacgtccttggaaggaactccttgccactggagcccaaacaact 30349528  T
Q  140 tggttta 146  Q
    |||||||    
T  30349527 tggttta 30349521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 40 - 133
Target Start/End: Original strand, 25417242 - 25417335
Alignment:
Q  40 catgcgtactggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaa 133  Q
    |||||| ||||||||| ||||||||||| ||| |||| || |||||||||| || ||||||||| ||||| ||||||||||||||||| |||||    
T  25417242 catgcgcactggccaagcgttgttccccctgggaatcgaacccggtattccccgagtacgtccttggaaggagctccttgccactggagcccaa 25417335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 40 - 144
Target Start/End: Complemental strand, 1538479 - 1538375
Alignment:
Q  40 catgcgtactggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaact 139  Q
    |||||| |||||||||  |||||||||| ||| |||| || |||||||||| ||  |||||||| ||||| ||||||||||||||||| ||||| |||||    
T  1538479 catgcgcactggccaagtgttgttccccctgggaatcgaacccggtattccccgaatacgtcctcggaaggagctccttgccactggagcccaaacaact 1538380  T
Q  140 tggtt 144  Q
    |||||    
T  1538379 tggtt 1538375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 40 - 144
Target Start/End: Original strand, 11845860 - 11845964
Alignment:
Q  40 catgcgtactggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaact 139  Q
    |||||| ||||||||||||||||||||| | |||||| || ||| |||| | |||||||||||| ||||| |||||||||||||| ||| | |||||| |    
T  11845860 catgcgcactggccaaacgttgttccccctcgaaatcgaacccgatatttctcgggtacgtccttggaaggagctccttgccactagaatcaaagcaaat 11845959  T
Q  140 tggtt 144  Q
    |||||    
T  11845960 tggtt 11845964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 81 - 144
Target Start/End: Original strand, 6767151 - 6767214
Alignment:
Q  81 ccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaacttggtt 144  Q
    |||||||||| |||||||||||| ||||| ||||||||||||||||| ||||||||||||||||    
T  6767151 ccggtattccccgggtacgtccttggaaggagctccttgccactggagcccaagcaacttggtt 6767214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 47 - 149
Target Start/End: Complemental strand, 12705055 - 12704953
Alignment:
Q  47 actggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaacttggttta 146  Q
    ||||| ||| ||||||||| | | | |||| || |||||||||| |||||||||||| ||||| |||||||||||||||||  |||| ||||||||||||    
T  12705055 actggtcaagcgttgttcctcctcggaatcgaacccggtattccccgggtacgtccttggaaggagctccttgccactggagtccaaacaacttggttta 12704956  T
Q  147 ctt 149  Q
    |||    
T  12704955 ctt 12704953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 40 - 125
Target Start/End: Complemental strand, 1899049 - 1898964
Alignment:
Q  40 catgcgtactggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactg 125  Q
    |||||| ||||||||| ||||||||||| ||| |||| || |||||||||| ||||||| |||| ||||| |||||||||||||||    
T  1899049 catgcgcactggccaagcgttgttccccctgggaatcgaacccggtattccccgggtacatccttggaaggagctccttgccactg 1898964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 64 - 144
Target Start/End: Complemental strand, 28857001 - 28856921
Alignment:
Q  64 ccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaacttggtt 144  Q
    |||| ||| |||| || |||||||||| ||||| |||||| ||||| ||||||||||||||||| ||||||||||||||||    
T  28857001 ccccctgggaatcgaacccggtattccccgggtgcgtccttggaaggagctccttgccactggagcccaagcaacttggtt 28856921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 60 - 147
Target Start/End: Complemental strand, 5079359 - 5079272
Alignment:
Q  60 tgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaacttggtttac 147  Q
    |||||||| |||||||| |  |||||||||||||| ||||| || ||||| ||||| ||||||| ||||||||| |||||||||||||    
T  5079359 tgttccccctggaaatcaaccccggtattccacggatacgtgcttggaaggagctctttgccaccggaacccaaacaacttggtttac 5079272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 30 - 144
Target Start/End: Original strand, 20516450 - 20516564
Alignment:
Q  30 taatccggctcatgcgtactggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaac 129  Q
    ||||||| |||||||| ||||||||| ||||||||||| |  ||||| | |||  |||| | |||||| ||||| | ||||||||||||| |||| ||||    
T  20516450 taatccgactcatgcgcactggccaagcgttgttccccctaaaaatcgattccaatatttcccgggtatgtccttgaaagaagctccttgtcactagaac 20516549  T
Q  130 ccaagcaacttggtt 144  Q
    |||||||| ||||||    
T  20516550 ccaagcaatttggtt 20516564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 30 - 140
Target Start/End: Original strand, 25950631 - 25950741
Alignment:
Q  30 taatccggctcatgcgtactggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaac 129  Q
    |||||||||||||||| |||||||||  |||||| |||||| ||||| || | | |||||| || |||||||||  |||| |||||||| |||||||| |    
T  25950631 taatccggctcatgcgcactggccaagtgttgtttcccttgaaaatcaaacctgatattccccgagtacgtcctttgaaggagctccttaccactggagc 25950730  T
Q  130 ccaagcaactt 140  Q
    |||| ||||||    
T  25950731 ccaaacaactt 25950741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 47 - 144
Target Start/End: Complemental strand, 8513560 - 8513463
Alignment:
Q  47 actggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaacttggtt 144  Q
    ||||||||| | ||||| ||| | | |||| || |||||||||| |||||||||||| ||||| |||||||||||||| ||  |||||||||||||||    
T  8513560 actggccaagcattgtttcccctaggaatcgaacccggtattccccgggtacgtccttggaaggagctccttgccacttgagtccaagcaacttggtt 8513463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 40 - 141
Target Start/End: Complemental strand, 20692981 - 20692880
Alignment:
Q  40 catgcgtactggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaact 139  Q
    |||| ||||||||||| ||||||| ||  | | |||| || |||||||||| |||||||||||| ||||||||||| |||||||| || ||||| |||||    
T  20692981 catgtgtactggccaagcgttgtttcctctaggaatcaaacccggtattccccgggtacgtccttggaagaagctctttgccactagagcccaaacaact 20692882  T
Q  140 tg 141  Q
    ||    
T  20692881 tg 20692880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 81 - 149
Target Start/End: Complemental strand, 12766138 - 12766070
Alignment:
Q  81 ccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaacttggtttactt 149  Q
    |||||||||| |||||||||||| ||||| |||||||||||||| ||  |||| |||||||||||||||    
T  12766138 ccggtattccccgggtacgtccttggaaggagctccttgccactcgagtccaaacaacttggtttactt 12766070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 40 - 144
Target Start/End: Complemental strand, 37263288 - 37263185
Alignment:
Q  40 catgcgtactggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaact 139  Q
    |||||| | ||||||| ||||||||||||  ||| || || ||| |||||| ||||||||||||  |||| | ||||||||||||||| |||||||||||    
T  37263288 catgcgcattggccaagcgttgttcccctgagaa-tcgaacccgatattccccgggtacgtccttagaaggaactccttgccactggagcccaagcaact 37263190  T
Q  140 tggtt 144  Q
    |||||    
T  37263189 tggtt 37263185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 41 - 145
Target Start/End: Original strand, 38297024 - 38297128
Alignment:
Q  41 atgcgtactggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaactt 140  Q
    ||||| |||| |||||||||||||||||||| |||  || |||||||||| |  |||| ||||  |||| ||||||||||||||||| ||||| ||| ||    
T  38297024 atgcgcactgaccaaacgttgttccccttgggaattgaacccggtattcctcaagtacatccttagaaggagctccttgccactggagcccaaacaattt 38297123  T
Q  141 ggttt 145  Q
    |||||    
T  38297124 ggttt 38297128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 58 - 144
Target Start/End: Original strand, 18136357 - 18136443
Alignment:
Q  58 gttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaacttggtt 144  Q
    |||||||||| ||| |||| || |||||||||  ||| |||||| | ||||| ||||||||||||||||| ||||| ||||||||||    
T  18136357 gttgttccccctgggaatcgaacccggtattctccggatacgtctttggaaggagctccttgccactggagcccaaacaacttggtt 18136443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 40 - 145
Target Start/End: Complemental strand, 20525886 - 20525781
Alignment:
Q  40 catgcgtactggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaact 139  Q
    |||||| |||||| ||  |||||||| | ||| |||| || ||| |||||| ||| ||| |||| | ||| ||||||||||||||||| |||||||||||    
T  20525886 catgcgcactggcgaagtgttgttccacctgggaatcgaacccgatattccccggatacatccttgaaaggagctccttgccactggagcccaagcaact 20525787  T
Q  140 tggttt 145  Q
    ||||||    
T  20525786 tggttt 20525781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 48 - 144
Target Start/End: Complemental strand, 30995161 - 30995065
Alignment:
Q  48 ctggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaacttggtt 144  Q
    ||||||||  |||||||||| ||| |||| || | |||||||| |  ||||||||| ||||| ||||||||||||||  |||||| |||||||||||    
T  30995161 ctggccaagtgttgttccccctgggaatcgaacctggtattccccatgtacgtccttggaaggagctccttgccactaaaacccaggcaacttggtt 30995065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 40 - 144
Target Start/End: Original strand, 35403571 - 35403675
Alignment:
Q  40 catgcgtactggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaact 139  Q
    |||||| | ||||||| ||||||||||| |   |||| || |||||||| | || ||||||||| ||||| ||||||||||||||||| ||||| ||| |    
T  35403571 catgcgcattggccaagcgttgttcccccttagaatcgaacccggtatttcccgagtacgtccttggaaggagctccttgccactggagcccaaacaagt 35403670  T
Q  140 tggtt 144  Q
    |||||    
T  35403671 tggtt 35403675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 22 - 89
Target Start/End: Complemental strand, 40060362 - 40060295
Alignment:
Q  22 tggatgattaatccggctcatgcgtactggccaaacgttgttccccttggaaatctaatccggtattc 89  Q
    |||| ||||||||||||||||||| |||||||||  |||||||||| || ||||| || |||||||||    
T  40060362 tggacgattaatccggctcatgcgcactggccaagtgttgttccccctgaaaatcgaacccggtattc 40060295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 30 - 144
Target Start/End: Complemental strand, 16755119 - 16755005
Alignment:
Q  30 taatccggctcatgcgtactggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaac 129  Q
    ||||||| |||||||| |||||||||  |||||| | | || ||||| || || ||||||| ||| |||||| | ||||  ||||||||||||||| | |    
T  16755119 taatccgactcatgcgcactggccaagtgttgtttctcctgaaaatcgaacccagtattccccggatacgtctttggaaagagctccttgccactgaagc 16755020  T
Q  130 ccaagcaacttggtt 144  Q
    ||||| |||||||||    
T  16755019 ccaaggaacttggtt 16755005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 83 - 145
Target Start/End: Complemental strand, 39728392 - 39728330
Alignment:
Q  83 ggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaacttggttt 145  Q
    |||||||| ||||||||| || ||||  ||||||||||||||||| ||||| |||||||||||    
T  39728392 ggtattccccgggtacgttcttggaaagagctccttgccactggagcccaaacaacttggttt 39728330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 40 - 146
Target Start/End: Original strand, 42861277 - 42861383
Alignment:
Q  40 catgcgtactggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaact 139  Q
    |||||| |||||||||  |||||| |||| ||||||  || ||| |||||| ||| || ||||| ||||  ||||||||||||||||| ||||| ||| |    
T  42861277 catgcgcactggccaagtgttgtttccctgggaaattgaacccgatattccccggatatgtccttggaatgagctccttgccactggagcccaaacaatt 42861376  T
Q  140 tggttta 146  Q
    |||||||    
T  42861377 tggttta 42861383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 40 - 145
Target Start/End: Original strand, 38897778 - 38897882
Alignment:
Q  40 catgcgtactggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaact 139  Q
    |||||| ||||||||| ||||||||||| |||||||| || |||||||||| |   |||||||| | ||  |||||||||||||| ||   |||||||||    
T  38897778 catgcgcactggccaagcgttgttcccc-tggaaatcgaacccggtattccccatatacgtccttgtaaagagctccttgccacttgagttcaagcaact 38897876  T
Q  140 tggttt 145  Q
    ||||||    
T  38897877 tggttt 38897882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 96 - 144
Target Start/End: Complemental strand, 23383640 - 23383592
Alignment:
Q  96 tacgtcctgggaagaagctccttgccactggaacccaagcaacttggtt 144  Q
    |||||||| ||||| ||||||||||||||||| ||||| ||||||||||    
T  23383640 tacgtccttggaaggagctccttgccactggagcccaaacaacttggtt 23383592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 40 - 123
Target Start/End: Complemental strand, 13664308 - 13664225
Alignment:
Q  40 catgcgtactggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccac 123  Q
    |||||| |||||||||  |||||||||| ||  |||| |||||||||||||   | |||||||| ||||| |||||||||||||    
T  13664308 catgcgcactggccaagtgttgttccccctgataatcgaatccggtattccctagatacgtccttggaaggagctccttgccac 13664225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 47 - 141
Target Start/End: Original strand, 7308430 - 7308524
Alignment:
Q  47 actggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaacttg 141  Q
    |||| |||| ||||||||||| ||| |||| || ||| |||||| |   |||||||| ||||  |||||||||||||| |||||||| |||||||    
T  7308430 actgcccaagcgttgttccccctgggaatcgaacccgatattcctcaaatacgtccttggaatgagctccttgccactagaacccaaacaacttg 7308524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 81 - 146
Target Start/End: Original strand, 3654012 - 3654077
Alignment:
Q  81 ccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaacttggttta 146  Q
    |||||||||  |||||||||||| ||||  ||||| ||| ||||||| ||||| ||||||||||||    
T  3654012 ccggtattctccgggtacgtccttggaaagagctcattgtcactggagcccaaacaacttggttta 3654077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 93 - 146
Target Start/End: Complemental strand, 24875340 - 24875287
Alignment:
Q  93 gggtacgtcctgggaagaagctccttgccactggaacccaagcaacttggttta 146  Q
    ||||||||||| |||| |||||||||||| || || |||||| |||||||||||    
T  24875340 gggtacgtccttggaataagctccttgccgctagagcccaagtaacttggttta 24875287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 40 - 144
Target Start/End: Original strand, 4016314 - 4016418
Alignment:
Q  40 catgcgtactggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaact 139  Q
    |||||| |||||||||  |||||||||| ||  |||| || ||| |||| | | |||||||||| ||||  |||| |||||||||||| ||||  |||||    
T  4016314 catgcgcactggccaagtgttgttccccctgataatcgaacccgatatttctcaggtacgtccttggaatgagcttcttgccactggagcccatacaact 4016413  T
Q  140 tggtt 144  Q
    |||||    
T  4016414 tggtt 4016418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 47 - 127
Target Start/End: Complemental strand, 14152091 - 14152011
Alignment:
Q  47 actggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactgga 127  Q
    ||||||||| ||||||||||  ||  |||| || |||||||||| | ||||| || | ||||| |||||||||||||||||    
T  14152091 actggccaagcgttgttccctatgagaatcgaacccggtattccccaggtacatcattggaaggagctccttgccactgga 14152011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 61; Significance: 5e-26; HSPs: 39)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 40 - 144
Target Start/End: Complemental strand, 48804733 - 48804629
Alignment:
Q  40 catgcgtactggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaact 139  Q
    |||||| |||||||||  |||||||||||||| |||| || |||||||||| ||| |||||||| ||||| ||||||||||||||||| |||||||||||    
T  48804733 catgcgcactggccaagtgttgttccccttgggaatcgaacccggtattccccggatacgtccttggaaggagctccttgccactggagcccaagcaact 48804634  T
Q  140 tggtt 144  Q
    |||||    
T  48804633 tggtt 48804629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 40 - 144
Target Start/End: Complemental strand, 43925562 - 43925458
Alignment:
Q  40 catgcgtactggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaact 139  Q
    |||||| |||| ||||  |||||||||| ||| |||| || |||||||||| |||||||||||| ||||| ||||||||||||||||| |||||||||||    
T  43925562 catgcgcactgaccaagtgttgttccccctgggaatcgaacccggtattccccgggtacgtccttggaaggagctccttgccactggagcccaagcaact 43925463  T
Q  140 tggtt 144  Q
    |||||    
T  43925462 tggtt 43925458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 40 - 141
Target Start/End: Complemental strand, 1797510 - 1797409
Alignment:
Q  40 catgcgtactggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaact 139  Q
    |||||| ||||||||| ||||||| ||| ||| |||| || |||||||||| ||| |||||||| ||||| ||||||||||||||||| |||||||||||    
T  1797510 catgcgcactggccaagcgttgtttcccctgggaatcgaacccggtattcctcggatacgtccttggaaggagctccttgccactggagcccaagcaact 1797411  T
Q  140 tg 141  Q
    ||    
T  1797410 tg 1797409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 40 - 144
Target Start/End: Complemental strand, 47341926 - 47341822
Alignment:
Q  40 catgcgtactggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaact 139  Q
    |||||| |||||||||  |||||||||| ||| |||| ||  ||||||||| |||||||||||| ||||  ||||||||||||||||| |||||||||||    
T  47341926 catgcgcactggccaagtgttgttccccctgggaatcgaactcggtattccccgggtacgtccttggaatgagctccttgccactggagcccaagcaact 47341827  T
Q  140 tggtt 144  Q
    |||||    
T  47341826 tggtt 47341822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 41 - 144
Target Start/End: Complemental strand, 45448019 - 45447916
Alignment:
Q  41 atgcgtactggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaactt 140  Q
    ||||| ||| ||||| |||||||| || |||||||| || | |||||| | |||||||||||| ||||| |||||||||||||| |||||||||||||||    
T  45448019 atgcgcactagccaagcgttgttctccctggaaatcgaacctggtatttctcgggtacgtccttggaaggagctccttgccactagaacccaagcaactt 45447920  T
Q  141 ggtt 144  Q
    ||||    
T  45447919 ggtt 45447916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 40 - 146
Target Start/End: Complemental strand, 13095908 - 13095802
Alignment:
Q  40 catgcgtactggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaact 139  Q
    |||||| |||||||||  |||||||||| ||| |||  || |||||||||| |||||||||||| | ||| ||||||||||||| ||| |||||||||||    
T  13095908 catgcgcactggccaagtgttgttccccctgggaatagaacccggtattccccgggtacgtccttgaaaggagctccttgccacgggagcccaagcaact 13095809  T
Q  140 tggttta 146  Q
    |||||||    
T  13095808 tggttta 13095802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 39 - 145
Target Start/End: Original strand, 22268087 - 22268193
Alignment:
Q  39 tcatgcgtactggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaac 138  Q
    ||||||| |||||||||| |||||||||| ||| |||| || |||||||||| |  ||||||||| ||||  ||||||||||||||||| ||||| ||||    
T  22268087 tcatgcgcactggccaaatgttgttccccctgggaatcgaacccggtattccccaagtacgtccttggaatgagctccttgccactggagcccaaacaac 22268186  T
Q  139 ttggttt 145  Q
    |||||||    
T  22268187 ttggttt 22268193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 47 - 149
Target Start/End: Original strand, 22993433 - 22993535
Alignment:
Q  47 actggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaacttggttta 146  Q
    ||||||||| ||||||||| | | | |||| || ||| |||||| |||||||||||| ||||| |||||||||||||||||  |||||||||||||||||    
T  22993433 actggccaagcgttgttcctcctcggaatcgaacccgatattccccgggtacgtccttggaaggagctccttgccactggagtccaagcaacttggttta 22993532  T
Q  147 ctt 149  Q
    |||    
T  22993533 ctt 22993535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 40 - 144
Target Start/End: Original strand, 4195261 - 4195365
Alignment:
Q  40 catgcgtactggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaact 139  Q
    |||||| ||| |||||| |||||||| | |||||||| ||  ||||||||| ||| |||||||| || || ||||||||||||||||| |||||||||||    
T  4195261 catgcgcactagccaaatgttgttcctcctggaaatcgaactcggtattccccggatacgtccttggcaggagctccttgccactggagcccaagcaact 4195360  T
Q  140 tggtt 144  Q
    |||||    
T  4195361 tggtt 4195365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 40 - 144
Target Start/End: Original strand, 17748441 - 17748545
Alignment:
Q  40 catgcgtactggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaact 139  Q
    |||||| ||||||||| ||||||||||| ||| |||| || |||||||||| ||  |||||||| |||||||||| ||||||||| || ||||| |||||    
T  17748441 catgcgcactggccaagcgttgttccccctgggaatcgaacccggtattccccgaatacgtccttggaagaagctgcttgccactagagcccaaacaact 17748540  T
Q  140 tggtt 144  Q
    |||||    
T  17748541 tggtt 17748545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 40 - 144
Target Start/End: Complemental strand, 18785719 - 18785615
Alignment:
Q  40 catgcgtactggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaact 139  Q
    |||||| |||||||||  |||||||||| | | |||| || |||||||||| |||||||||||| ||||| |||| |||||||||||| |||| ||||||    
T  18785719 catgcgcactggccaagtgttgttccccctaggaatcgaacccggtattccccgggtacgtccttggaaggagcttcttgccactggagcccatgcaact 18785620  T
Q  140 tggtt 144  Q
    |||||    
T  18785619 tggtt 18785615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 58 - 149
Target Start/End: Complemental strand, 21530780 - 21530689
Alignment:
Q  58 gttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaacttggtttactt 149  Q
    |||||||||| ||| |||| || || ||||||| | |||||||||| ||||| ||||||||||||||||| || ||||||||||||||||||    
T  21530780 gttgttccccctgggaatcaaacccagtattccccaggtacgtccttggaaggagctccttgccactggagccgaagcaacttggtttactt 21530689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 42 - 144
Target Start/End: Original strand, 10047937 - 10048039
Alignment:
Q  42 tgcgtactggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaacttg 141  Q
    |||| |||||||||  |||||||||| ||| |||| || |||||||||| ||| |||||||| ||||| |||||||||||||||||   |||||||||||    
T  10047937 tgcgcactggccaagtgttgttccccctgggaatcgaacccggtattccccggatacgtccttggaaggagctccttgccactggagttcaagcaacttg 10048036  T
Q  142 gtt 144  Q
    |||    
T  10048037 gtt 10048039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 40 - 142
Target Start/End: Complemental strand, 34659276 - 34659174
Alignment:
Q  40 catgcgtactggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaact 139  Q
    |||||| ||||| ||| ||||||||||||||  |||| || |||||||||| ||||||| |||  ||||| ||||||||||||||||| ||||| |||||    
T  34659276 catgcgcactggtcaagcgttgttccccttgagaatcgaacccggtattccccgggtacatccctggaaggagctccttgccactggagcccaaacaact 34659177  T
Q  140 tgg 142  Q
    |||    
T  34659176 tgg 34659174  T

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Target: chr7; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 47 - 144
Target Start/End: Complemental strand, 16802166 - 16802069
Alignment:
Q  47 actggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaacttggtt 144  Q
    ||||||||| ||||||||| | |   |||| ||||||||||||| |||||||||||| ||||| ||||| ||||||||||| |||| |||||||||||    
T  16802166 actggccaatcgttgttcctcctaagaatcgaatccggtattccccgggtacgtccttggaaggagctcattgccactggagcccaggcaacttggtt 16802069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 47 - 140
Target Start/End: Complemental strand, 42032139 - 42032046
Alignment:
Q  47 actggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaactt 140  Q
    ||||||||||||||||||||| ||| |||| || | |||||||| |||||||||||| ||||| |||| ||||| |||||| ||||| ||||||    
T  42032139 actggccaaacgttgttccccgtgggaatcgaaccaggtattccccgggtacgtccttggaaggagcttcttgctactggagcccaaacaactt 42032046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 47 - 145
Target Start/End: Original strand, 4228820 - 4228915
Alignment:
Q  47 actggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaacttggttt 145  Q
    |||||||||||||||||||   |||||||| || | |||||||| ||| |||||||| ||||| ||||||||||| ||||| ||||| |||||||||||    
T  4228820 actggccaaacgttgttcc---tggaaatcgaacctggtattcctcggatacgtccttggaaggagctccttgccgctggagcccaaacaacttggttt 4228915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 57 - 141
Target Start/End: Original strand, 5069891 - 5069975
Alignment:
Q  57 cgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaacttg 141  Q
    ||||||||| | |||||||| || |||||||| | ||||||||||||  |||||||||||||||||||||| ||||| |||||||    
T  5069891 cgttgttcctcctggaaatcgaacccggtatttcccgggtacgtccttagaagaagctccttgccactggagcccaaacaacttg 5069975  T

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Target: chr7; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 81 - 149
Target Start/End: Original strand, 34127720 - 34127788
Alignment:
Q  81 ccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaacttggtttactt 149  Q
    |||||||||| |||||||||||| ||||| || ||||||||| |||| |||||||||||||||||||||    
T  34127720 ccggtattccccgggtacgtccttggaaggagttccttgccattggagcccaagcaacttggtttactt 34127788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 40 - 147
Target Start/End: Original strand, 19914762 - 19914868
Alignment:
Q  40 catgcgtactggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaact 139  Q
    |||||| | ||||||| |||||||||  |||| |||| || || |||||||   |||||||||| ||||| ||||||||||||||||| |||||||||||    
T  19914762 catgcgcattggccaagcgttgttcct-ttgggaatcgaacccagtattccttaggtacgtccttggaaggagctccttgccactggagcccaagcaact 19914860  T
Q  140 tggtttac 147  Q
    ||||||||    
T  19914861 tggtttac 19914868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 47 - 145
Target Start/End: Complemental strand, 1605984 - 1605886
Alignment:
Q  47 actggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaacttggttt 145  Q
    ||||||||| ||||||||||| |||||||| || | |||||||  |||||||||||| ||||| ||||||||| || ||||  |||| |||||||||||    
T  1605984 actggccaagcgttgttccccctggaaatcgaaccaggtattctccgggtacgtccttggaaggagctccttgtcattggagtccaaacaacttggttt 1605886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 47 - 144
Target Start/End: Original strand, 26423353 - 26423450
Alignment:
Q  47 actggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaacttggtt 144  Q
    ||||||||| ||||||| ||| ||| |||| || ||||||||||  ||||||||||| ||||| || | |||||||||||| ||||| ||||||||||    
T  26423353 actggccaagcgttgtttcccctgggaatcgaacccggtattccttgggtacgtccttggaaggagtttcttgccactggagcccaaacaacttggtt 26423450  T

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Target: chr7; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 47 - 144
Target Start/End: Complemental strand, 39420880 - 39420784
Alignment:
Q  47 actggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaacttggtt 144  Q
    ||||||||| |||||||||| |||| | || || |||||||||| ||||||| |||| | ||| |||||||||||||| || ||||||||||||||||    
T  39420880 actggccaagcgttgttccctttgggattcgaa-ccggtattccccgggtacctccttgaaaggagctccttgccactagagcccaagcaacttggtt 39420784  T

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Target: chr7; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 40 - 145
Target Start/End: Original strand, 43862031 - 43862136
Alignment:
Q  40 catgcgtactggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaact 139  Q
    |||||| ||||||||||||||||||||| ||| |||| || |||||||||| | | |||||| | ||||  ||||||||||| || || ||||| |||||    
T  43862031 catgcgcactggccaaacgttgttccccctgggaatcgaacccggtattccccagatacgtctttggaaagagctccttgccgctagagcccaaacaact 43862130  T
Q  140 tggttt 145  Q
    ||||||    
T  43862131 tggttt 43862136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 40 - 144
Target Start/End: Original strand, 42210321 - 42210425
Alignment:
Q  40 catgcgtactggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaact 139  Q
    |||||| |||||||||||||||||  |  ||| |||| || |||||||||| ||| |||||||| ||||  |||||||||||||||||  | ||||||||    
T  42210321 catgcgcactggccaaacgttgttttcactgggaatcgaagccggtattcctcggatacgtccttggaaagagctccttgccactggagtctaagcaact 42210420  T
Q  140 tggtt 144  Q
    |||||    
T  42210421 tggtt 42210425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 47 - 146
Target Start/End: Complemental strand, 22974010 - 22973911
Alignment:
Q  47 actggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaacttggttta 146  Q
    ||||||||| ||||||||||| ||  |||| || |||||||||| || ||||||||| ||||| ||||||| |||| | || ||||| ||||||||||||    
T  22974010 actggccaagcgttgttccccctgagaatcgaacccggtattccccgagtacgtccttggaaggagctcctcgccattagagcccaaacaacttggttta 22973911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 40 - 146
Target Start/End: Complemental strand, 27028329 - 27028223
Alignment:
Q  40 catgcgtactggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaact 139  Q
    |||||| |||||||||  |||||||||| |||||||| || | |||||| | | ||||||| || ||||  ||||||||||||| |||  |||| |||||    
T  27028329 catgcgcactggccaagtgttgttccccctggaaatcgaacctggtatttcccaggtacgttcttggaatgagctccttgccaccggagtccaaacaact 27028230  T
Q  140 tggttta 146  Q
    |||||||    
T  27028229 tggttta 27028223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 40 - 110
Target Start/End: Original strand, 38578926 - 38578996
Alignment:
Q  40 catgcgtactggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaaga 110  Q
    |||||| ||||||||| ||||||||||| ||| |||| || ||| |||||| |||||||||||| ||||||    
T  38578926 catgcgcactggccaagcgttgttccccctgggaatcgaacccgatattccccgggtacgtccttggaaga 38578996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 73 - 146
Target Start/End: Complemental strand, 11607148 - 11607075
Alignment:
Q  73 aatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaacttggttta 146  Q
    |||| |||||| |||||| ||  |||||||| ||||| || |||||||||||||| ||||||||||||| ||||    
T  11607148 aatcgaatccgatattccccgaatacgtccttggaaggagttccttgccactggagcccaagcaacttgattta 11607075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 59 - 144
Target Start/End: Complemental strand, 14650348 - 14650263
Alignment:
Q  59 ttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaacttggtt 144  Q
    ||||||| | |||||||| || ||| |||||  |||||||||||| ||||| |||||||||||||| ||  |||| ||||||||||    
T  14650348 ttgttcctcctggaaatcgaacccgatattctccgggtacgtccttggaaggagctccttgccactagagtccaaacaacttggtt 14650263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 47 - 140
Target Start/End: Complemental strand, 23658222 - 23658130
Alignment:
Q  47 actggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaactt 140  Q
    ||||||||| ||||||||||| |||||||| ||   | ||||||  ||||||||||| | ||| ||||||||||||||||| ||||| ||||||    
T  23658222 actggccaagcgttgttccccctggaaatcgaactggatattccctgggtacgtccttg-aaggagctccttgccactggagcccaaacaactt 23658130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 47 - 144
Target Start/End: Original strand, 27875154 - 27875250
Alignment:
Q  47 actggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaacttggtt 144  Q
    |||||||||  ||| |||||| ||| |||| ||||||||||||| | | |||||| ||| ||| |||| |||||||||||| ||||| ||||||||||    
T  27875154 actggccaagtgttattccccctgggaatcgaatccggtattccccagatacgtcttgg-aaggagctacttgccactggagcccaaacaacttggtt 27875250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 138
Target Start/End: Complemental strand, 9685807 - 9685691
Alignment:
Q  22 tggatgattaatccggctcatgcgtactggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgcc 121  Q
    ||||||| ||||||||||||||||||  ||  ||  |||||||| | ||  |||| || ||| |||||| ||| ||||| || ||||| |||||||||||    
T  9685807 tggatgactaatccggctcatgcgtagaggttaagtgttgttcctcctgagaatcgaacccgatattccccggatacgtgcttggaaggagctccttgcc 9685708  T
Q  122 actggaacccaagcaac 138  Q
    |||||| ||||| ||||    
T  9685707 actggagcccaaacaac 9685691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 40 - 144
Target Start/End: Complemental strand, 23823999 - 23823895
Alignment:
Q  40 catgcgtactggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaact 139  Q
    |||||| ||||||||||||||||| ||||||  |||| |||| | |||||| ||| ||||||||  |||| |||||||| |||| |||   ||| |||||    
T  23823999 catgcgcactggccaaacgttgtttcccttgagaatcaaatctgatattcctcggatacgtccttagaaggagctccttaccaccggagtgcaaacaact 23823900  T
Q  140 tggtt 144  Q
    |||||    
T  23823899 tggtt 23823895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 40 - 144
Target Start/End: Original strand, 43346838 - 43346942
Alignment:
Q  40 catgcgtactggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaact 139  Q
    |||||| || ||||||  |||||||||||||  |||  || |||||||||| | | |||||| | ||||| |||||||||||||||||  |||| |||||    
T  43346838 catgcgcaccggccaagtgttgttccccttgagaattgaacccggtattccccagatacgtctttggaaggagctccttgccactggagtccaaacaact 43346937  T
Q  140 tggtt 144  Q
    |||||    
T  43346938 tggtt 43346942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 145
Target Start/End: Complemental strand, 37514971 - 37514866
Alignment:
Q  40 catgcgtactggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaact 139  Q
    |||||| |||| |||||||||||||||  || ||||| || || ||||||| |||||| ||||| ||||| |||| |||| || || |  |||| |||||    
T  37514971 catgcgcactgaccaaacgttgttcccactgaaaatcgaacccagtattccccgggtatgtccttggaaggagctacttgtcattgaagtccaaacaact 37514872  T
Q  140 tggttt 145  Q
    ||||||    
T  37514871 tggttt 37514866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 83 - 140
Target Start/End: Complemental strand, 46414682 - 46414625
Alignment:
Q  83 ggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaactt 140  Q
    |||||||||||||||||||||   ||| ||||||||||||| ||| ||||| ||||||    
T  46414682 ggtattccacgggtacgtccttaaaaggagctccttgccacgggagcccaaacaactt 46414625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 105 - 145
Target Start/End: Original strand, 5039542 - 5039582
Alignment:
Q  105 ggaagaagctccttgccactggaacccaagcaacttggttt 145  Q
    ||||| ||||||||||||||||| ||||| |||||||||||    
T  5039542 ggaaggagctccttgccactggagcccaaacaacttggttt 5039582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 105 - 145
Target Start/End: Complemental strand, 22573798 - 22573758
Alignment:
Q  105 ggaagaagctccttgccactggaacccaagcaacttggttt 145  Q
    |||||||||| ||||| |||||| |||||||||||||||||    
T  22573798 ggaagaagcttcttgctactggagcccaagcaacttggttt 22573758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 61; Significance: 5e-26; HSPs: 44)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 40 - 144
Target Start/End: Complemental strand, 38005449 - 38005345
Alignment:
Q  40 catgcgtactggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaact 139  Q
    |||||| ||||||||| ||||||||||||||| |||| || || ||||||| |||||||||||| ||||| ||||||||||||||||| ||||| |||||    
T  38005449 catgcgcactggccaagcgttgttccccttgggaatcgaacccagtattccccgggtacgtccttggaaggagctccttgccactggagcccaaacaact 38005350  T
Q  140 tggtt 144  Q
    |||||    
T  38005349 tggtt 38005345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 47 - 144
Target Start/End: Complemental strand, 7747314 - 7747217
Alignment:
Q  47 actggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaacttggtt 144  Q
    ||||||||||||||||||| | | | |||| || |||||||||| ||| |||||||| ||||| ||||||||||||||||| ||||||||||||||||    
T  7747314 actggccaaacgttgttcctcctaggaatcgaacccggtattccccggatacgtccttggaaggagctccttgccactggagcccaagcaacttggtt 7747217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 47 - 144
Target Start/End: Original strand, 18902596 - 18902693
Alignment:
Q  47 actggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaacttggtt 144  Q
    ||||| ||| ||||||||||| ||| |||| || |||||||||| || ||||||||| ||||| ||||||||||||||||| ||||||||||||||||    
T  18902596 actggtcaagcgttgttccccgtgggaatcgaacccggtattccccgagtacgtccttggaaggagctccttgccactggagcccaagcaacttggtt 18902693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 40 - 144
Target Start/End: Complemental strand, 331548 - 331444
Alignment:
Q  40 catgcgtactggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaact 139  Q
    |||||| |||||||||  |||||||||| ||| |||| || |||||||||| |||||||||||| ||||  ||||| ||||||||||| |||||||||||    
T  331548 catgcgcactggccaagtgttgttccccctgggaatcgaacccggtattccccgggtacgtccttggaaagagctcattgccactggagcccaagcaact 331449  T
Q  140 tggtt 144  Q
    |||||    
T  331448 tggtt 331444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 40 - 144
Target Start/End: Complemental strand, 8410178 - 8410074
Alignment:
Q  40 catgcgtactggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaact 139  Q
    |||||| |||||||||  |||||||||| ||| |||| || ||| |||||  |||||||||||| ||||| ||||||||||||||||| |||||||||||    
T  8410178 catgcgcactggccaagtgttgttccccctgggaatcgaacccgatattctccgggtacgtccttggaaggagctccttgccactggagcccaagcaact 8410079  T
Q  140 tggtt 144  Q
    |||||    
T  8410078 tggtt 8410074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 40 - 146
Target Start/End: Original strand, 3643946 - 3644052
Alignment:
Q  40 catgcgtactggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaact 139  Q
    |||||| ||||||||| ||||||||| | | |||||| || |||||||||| ||| |||||||| ||||  |||||||| |||||||| |||||||||||    
T  3643946 catgcgcactggccaagcgttgttcctcgtagaaatcaaacccggtattccccggatacgtccttggaatgagctcctttccactggagcccaagcaact 3644045  T
Q  140 tggttta 146  Q
    |||||||    
T  3644046 tggttta 3644052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 47 - 144
Target Start/End: Original strand, 21180380 - 21180477
Alignment:
Q  47 actggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaacttggtt 144  Q
    |||||||||  ||||||| || ||| |||| ||||||||||||  |||||||||||| ||||| ||||||||||||||||| ||||| ||||||||||    
T  21180380 actggccaagtgttgttctccatgggaatcgaatccggtattcttcgggtacgtccttggaaggagctccttgccactggagcccaaacaacttggtt 21180477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 40 - 140
Target Start/End: Complemental strand, 7787103 - 7787003
Alignment:
Q  40 catgcgtactggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaact 139  Q
    ||||||||||||||||   ||||||||| |||||||| || |||||||||| |||||||||||| | ||| || |||||||||||||| ||||| |||||    
T  7787103 catgcgtactggccaagtattgttccccctggaaatcgaacccggtattccccgggtacgtcctagaaaggagttccttgccactggagcccaaccaact 7787004  T
Q  140 t 140  Q
    |    
T  7787003 t 7787003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 40 - 144
Target Start/End: Original strand, 10026675 - 10026779
Alignment:
Q  40 catgcgtactggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaact 139  Q
    |||||| ||||||||||||||||||||| ||  |||| || ||||||||   || ||||||||| ||||| |||||||||||| |||| |||||||||||    
T  10026675 catgcgcactggccaaacgttgttccccctgagaatcgaacccggtattttccgagtacgtccttggaaggagctccttgccattggagcccaagcaact 10026774  T
Q  140 tggtt 144  Q
    |||||    
T  10026775 tggtt 10026779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 40 - 144
Target Start/End: Complemental strand, 22593181 - 22593078
Alignment:
Q  40 catgcgtactggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaact 139  Q
    |||||| ||||||||| ||||||||||| ||| |||| ||  | ||||||| |||||||||||| ||||| ||||||||||||||||| | |||||||||    
T  22593181 catgcgcactggccaa-cgttgttccccctgggaatcgaactcagtattccccgggtacgtccttggaaggagctccttgccactggagcacaagcaact 22593083  T
Q  140 tggtt 144  Q
    |||||    
T  22593082 tggtt 22593078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 40 - 128
Target Start/End: Complemental strand, 41220682 - 41220594
Alignment:
Q  40 catgcgtactggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaa 128  Q
    |||||| ||||||||| ||||||||| | ||| |||| || |||||||||| |||||||||||| ||||| ||||||||||||||||||    
T  41220682 catgcgcactggccaagcgttgttcctcctgggaatcgaacccggtattccccgggtacgtccttggaaggagctccttgccactggaa 41220594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 47 - 144
Target Start/End: Complemental strand, 15079523 - 15079426
Alignment:
Q  47 actggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaacttggtt 144  Q
    ||||| ||| ||||||||||| |||||||| || || ||||||| |||||||||||| |||||  | |||||||||| ||| ||||||||||||||||    
T  15079523 actggtcaagcgttgttccccctggaaatcgaaccctgtattccccgggtacgtccttggaaggtgttccttgccaccggagcccaagcaacttggtt 15079426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 40 - 141
Target Start/End: Complemental strand, 37560220 - 37560119
Alignment:
Q  40 catgcgtactggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaact 139  Q
    |||||| |||| |||||||||||||||||||  |||| || | |||||||| |||||||||||| ||||| |||| ||| |||||||| ||||| |||||    
T  37560220 catgcgcactgaccaaacgttgttccccttgagaatcgaacctggtattcctcgggtacgtccttggaaggagcttcttaccactggagcccaaacaact 37560121  T
Q  140 tg 141  Q
    ||    
T  37560120 tg 37560119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 40 - 144
Target Start/End: Complemental strand, 12864271 - 12864167
Alignment:
Q  40 catgcgtactggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaact 139  Q
    |||||| |||| ||||  |||||||||| |||||||| ||||||||||||| ||  |||||| | ||||| ||||||||| ||||||| ||||| |||||    
T  12864271 catgcgcactgaccaagtgttgttccccctggaaatcgaatccggtattccccgaatacgtcattggaaggagctccttgtcactggagcccaaacaact 12864172  T
Q  140 tggtt 144  Q
    |||||    
T  12864171 tggtt 12864167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 40 - 144
Target Start/End: Complemental strand, 34356253 - 34356149
Alignment:
Q  40 catgcgtactggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaact 139  Q
    |||||| |||| ||||  |||||||||| |||||||| || |||||||||| | | |||||||| ||||  ||||||||||||||||| ||||| |||||    
T  34356253 catgcgcactgaccaagtgttgttccccctggaaatcgaacccggtattccccagatacgtccttggaaatagctccttgccactggagcccaaacaact 34356154  T
Q  140 tggtt 144  Q
    |||||    
T  34356153 tggtt 34356149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 40 - 144
Target Start/End: Original strand, 42770710 - 42770814
Alignment:
Q  40 catgcgtactggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaact 139  Q
    |||||| ||||||||| ||||||||||| ||  |||  || |||||||| | ||| |||||||| ||||| ||||| ||||||||||| |||||||||||    
T  42770710 catgcgcactggccaagcgttgttccccctgagaattgaacccggtatttctcggatacgtccttggaaggagctctttgccactggagcccaagcaact 42770809  T
Q  140 tggtt 144  Q
    |||||    
T  42770810 tggtt 42770814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 47 - 146
Target Start/End: Original strand, 39201574 - 39201673
Alignment:
Q  47 actggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaacttggttta 146  Q
    ||||||||||| ||||||||| ||  |||| ||| ||||||||| || ||||||||| ||||| ||||||||||||||  | ||||| ||||||||||||    
T  39201574 actggccaaacattgttccccctgagaatcgaattcggtattcctcgagtacgtccttggaaggagctccttgccactatagcccaatcaacttggttta 39201673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 40 - 146
Target Start/End: Complemental strand, 33005798 - 33005693
Alignment:
Q  40 catgcgtactggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaact 139  Q
    |||||| |||||||||  ||||||||||| ||||    || ||||||||||||||||||||||| | ||  ||||||||||||||||| ||||||||| |    
T  33005798 catgcgcactggccaagtgttgttcccctgggaacag-aacccggtattccacgggtacgtcctagaaatgagctccttgccactggagcccaagcaatt 33005700  T
Q  140 tggttta 146  Q
    |||||||    
T  33005699 tggttta 33005693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 40 - 146
Target Start/End: Original strand, 37804950 - 37805056
Alignment:
Q  40 catgcgtactggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaact 139  Q
    |||||| ||| ||||| |||| |||||| ||  |||| ||||||||||| | |||||||||||| || || || |||||||||||| | |||||||||||    
T  37804950 catgcgcactagccaagcgttattccccctgtgaatcgaatccggtatttctcgggtacgtccttgggaggagttccttgccactgtagcccaagcaact 37805049  T
Q  140 tggttta 146  Q
    |||||||    
T  37805050 tggttta 37805056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 40 - 149
Target Start/End: Original strand, 6358210 - 6358319
Alignment:
Q  40 catgcgtactggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaact 139  Q
    |||||| |||||||||  |||||||||| |||||||| |||| |||||||| ||| ||||||||  |||  |||| |||||||||||| ||||| |||||    
T  6358210 catgcgcactggccaagtgttgttccccctggaaatcgaatctggtattccccggatacgtcctttgaatgagcttcttgccactggagcccaaacaact 6358309  T
Q  140 tggtttactt 149  Q
     |||| ||||    
T  6358310 cggttcactt 6358319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 47 - 144
Target Start/End: Original strand, 14853433 - 14853530
Alignment:
Q  47 actggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaacttggtt 144  Q
    |||||||||| |||||||||| || ||||| |||| |||||||| ||| ||| |||| | ||| || |||||||||||||| ||||| ||||||||||    
T  14853433 actggccaaaagttgttccccctgaaaatcgaatctggtattccccggatacatccttgaaaggagttccttgccactggagcccaaacaacttggtt 14853530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 49 - 146
Target Start/End: Complemental strand, 29422253 - 29422156
Alignment:
Q  49 tggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaacttggttta 146  Q
    |||||||  |||||||||  |||||||| || || ||||||| |||||||||||| | ||| |||||||||| |||||| ||||| ||||||||||||    
T  29422253 tggccaagtgttgttccctctggaaatcgaacccagtattccccgggtacgtccttgaaaggagctccttgctactggagcccaaacaacttggttta 29422156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 40 - 133
Target Start/End: Original strand, 39806944 - 39807037
Alignment:
Q  40 catgcgtactggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaa 133  Q
    |||||| ||||||||||||||||| | ||||| |||| || |||||||||| |||||||||||| | ||| |||  |||||||||||| |||||    
T  39806944 catgcgcactggccaaacgttgtttctcttgggaatcgaacccggtattccccgggtacgtccttgtaaggagcatcttgccactggagcccaa 39807037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 47 - 144
Target Start/End: Original strand, 41031972 - 41032068
Alignment:
Q  47 actggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaacttggtt 144  Q
    |||||||||  |||||||||| ||| |||| || ||||| |||| | |||||||||| ||||| ||||||||||||||||| ||||||||| ||||||    
T  41031972 actggccaagtgttgttccccctgggaatcgaacccggtgttcc-ctggtacgtccttggaaggagctccttgccactggagcccaagcaatttggtt 41032068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 40 - 144
Target Start/End: Complemental strand, 2550915 - 2550811
Alignment:
Q  40 catgcgtactggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaact 139  Q
    |||||| |||||| ||  |||||||| | ||| |||| || ||| |||||| ||| |||||||| | ||| ||||||||||||||||| |||||||||||    
T  2550915 catgcgcactggctaagtgttgttcctcctgggaatcgaacccgatattccccggatacgtccttgtaaggagctccttgccactggagcccaagcaact 2550816  T
Q  140 tggtt 144  Q
    |||||    
T  2550815 tggtt 2550811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 40 - 144
Target Start/End: Original strand, 19976866 - 19976970
Alignment:
Q  40 catgcgtactggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaact 139  Q
    |||||| |||| ||||||||| |||||| || ||||| || |||||||||| ||| |||||||| ||||  |||| |||||||||||| ||||| ||| |    
T  19976866 catgcgcactgaccaaacgttattccccctgaaaatcgaacccggtattccccggatacgtccttggaaagagctacttgccactggagcccaaacaatt 19976965  T
Q  140 tggtt 144  Q
    |||||    
T  19976966 tggtt 19976970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 53 - 144
Target Start/End: Original strand, 10046548 - 10046639
Alignment:
Q  53 caaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaacttggtt 144  Q
    ||||||||||| ||||||  |||| || |||||||||  ||| ||||| || ||||| |||||||||||| |||| ||||||||||||||||    
T  10046548 caaacgttgtttcccttgagaatcgaacccggtattctccggatacgttcttggaaggagctccttgccattggagcccaagcaacttggtt 10046639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 41 - 144
Target Start/End: Complemental strand, 11069924 - 11069821
Alignment:
Q  41 atgcgtactggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaactt 140  Q
    ||||| ||||||||||||||||||||| | | |||| || | |||||||| |||||||||||| ||||  ||||||| |||| |||| || || ||||||    
T  11069924 atgcgcactggccaaacgttgttccccctcggaatcgaacctggtattccccgggtacgtccttggaatgagctcctagccattggagccaaaacaactt 11069825  T
Q  141 ggtt 144  Q
    ||||    
T  11069824 ggtt 11069821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 47 - 145
Target Start/End: Original strand, 2528407 - 2528505
Alignment:
Q  47 actggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaacttggttt 145  Q
    |||| |||| ||||||||||| ||| |||| || ||||| |||| || ||||||||| ||||| ||||| ||||||||||| ||||| ||| |||||||    
T  2528407 actgaccaagcgttgttccccctgggaatcgaacccggtgttcctcgagtacgtccttggaaggagctcattgccactggagcccaaacaatttggttt 2528505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 40 - 118
Target Start/End: Complemental strand, 10823107 - 10823029
Alignment:
Q  40 catgcgtactggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctcctt 118  Q
    |||||| ||||||||| ||||||||| | ||| |||| || |||||||||| |||||||||||| ||||| ||||||||    
T  10823107 catgcgcactggccaagcgttgttcctcctgggaatcaaacccggtattccccgggtacgtccttggaaggagctcctt 10823029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 47 - 141
Target Start/End: Original strand, 31596498 - 31596592
Alignment:
Q  47 actggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaacttg 141  Q
    ||||||||||| ||||||||| || ||||  || | | ||||| |||| |||||| | ||||| |||||||||||||||||| ||||||||||||    
T  31596498 actggccaaacattgttccccctgaaaatagaacctgatattctacggatacgtctttggaaggagctccttgccactggaatccaagcaacttg 31596592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 40 - 141
Target Start/End: Complemental strand, 21286491 - 21286390
Alignment:
Q  40 catgcgtactggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaact 139  Q
    |||||| ||||| ||| ||||||| | | ||| |||| || |||||||||| ||| |||||||| ||||| ||||||||||||||||| | ||| |||||    
T  21286491 catgcgcactggtcaagcgttgtttcgcctgggaatcgaacccggtattccccggatacgtccttggaaggagctccttgccactggagctcaaacaact 21286392  T
Q  140 tg 141  Q
    ||    
T  21286391 tg 21286390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 40 - 144
Target Start/End: Original strand, 2149253 - 2149358
Alignment:
Q  40 catgcgtactggccaaacgttgttccccttggaaatctaa-tccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaac 138  Q
    |||||| |||||||||||||| ||||||  |  |||| || ||||||||||| | | ||| |||| | |||||| |||||||||||||| ||||| ||||    
T  2149253 catgcgcactggccaaacgttattcccccagtgaatcgaactccggtattccccagatacatccttgaaagaagttccttgccactggagcccaaacaac 2149352  T
Q  139 ttggtt 144  Q
    ||||||    
T  2149353 ttggtt 2149358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 40 - 144
Target Start/End: Original strand, 20612594 - 20612699
Alignment:
Q  40 catgcgtactggccaaacgttgttccc-cttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaac 138  Q
    |||||| |||||||||  ||||||||| | ||  |||| || |||||||||| ||  |||  ||| ||||| ||||||||||||||||| ||||||||||    
T  20612594 catgcgcactggccaagtgttgttccctcctgagaatcgaacccggtattccccgaatacaaccttggaaggagctccttgccactggagcccaagcaac 20612693  T
Q  139 ttggtt 144  Q
    ||||||    
T  20612694 ttggtt 20612699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 47 - 144
Target Start/End: Complemental strand, 44139524 - 44139427
Alignment:
Q  47 actggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaacttggtt 144  Q
    ||||||||| ||||||||||| ||| |||| || |||||||||| | | | | |||| ||||| || ||||  |||||||| ||||||||||||||||    
T  44139524 actggccaagcgttgttccccctgggaatcgaacccggtattccccagatgcatccttggaaggagttcctcaccactggagcccaagcaacttggtt 44139427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 95 - 144
Target Start/End: Complemental strand, 44945586 - 44945537
Alignment:
Q  95 gtacgtcctgggaagaagctccttgccactggaacccaagcaacttggtt 144  Q
    ||||||||| ||||| |||||||||||||| || ||||||||||||||||    
T  44945586 gtacgtccttggaaggagctccttgccacttgagcccaagcaacttggtt 44945537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 40 - 144
Target Start/End: Original strand, 9360807 - 9360911
Alignment:
Q  40 catgcgtactggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaact 139  Q
    |||||| ||||||||||||||||| ||  | | |||| || | |||||||| |||||||||||| ||||  || |||||||| ||| | ||||||||| |    
T  9360807 catgcgcactggccaaacgttgtttcctctagtaatcgaacctggtattccccgggtacgtccttggaatgagatccttgcccctgaagcccaagcaatt 9360906  T
Q  140 tggtt 144  Q
    |||||    
T  9360907 tggtt 9360911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 40 - 144
Target Start/End: Complemental strand, 10669639 - 10669535
Alignment:
Q  40 catgcgtactggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaact 139  Q
    |||||| ||||||||| |||||||| || ||| |||| || ||||||  || | |||||||||| ||||| || ||||| || |||||  ||||||||||    
T  10669639 catgcgcactggccaagcgttgttctccctgggaatcaaacccggtagcccccaggtacgtccttggaaggagatccttacccctggagtccaagcaact 10669540  T
Q  140 tggtt 144  Q
    |||||    
T  10669539 tggtt 10669535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 40 - 144
Target Start/End: Complemental strand, 25604641 - 25604538
Alignment:
Q  40 catgcgtactggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaact 139  Q
    ||||| |||||| ||||||||||||||| |||||||| |||||||||||   ||| ||| || | |||| |||||  |||||||| || |||||| ||||    
T  25604641 catgcatactggtcaaacgttgttcccc-tggaaatcgaatccggtattttccggatacatctttggaaaaagctatttgccactagagcccaagtaact 25604543  T
Q  140 tggtt 144  Q
    |||||    
T  25604542 tggtt 25604538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 40 - 144
Target Start/End: Complemental strand, 29653674 - 29653571
Alignment:
Q  40 catgcgtactggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaact 139  Q
    |||||| |||| |||| |||||||  || |||||||| ||||||||||| |  | ||||||||| |||||||| || |||||||||| | |||| |||||    
T  29653674 catgcgcactgcccaagcgttgttttccctggaaatcgaatccggtatttccggagtacgtccttggaagaagttcattgccactgg-agccaaacaact 29653576  T
Q  140 tggtt 144  Q
    |||||    
T  29653575 tggtt 29653571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 40 - 127
Target Start/End: Original strand, 25540463 - 25540550
Alignment:
Q  40 catgcgtactggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactgga 127  Q
    |||||| ||||||||| ||||||||||| | | |||| || || ||||||| | | |||||||| ||||  |||||||||||||||||    
T  25540463 catgcgcactggccaagcgttgttccccctaggaatcgaacccagtattccccagatacgtccttggaatgagctccttgccactgga 25540550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 47 - 141
Target Start/End: Complemental strand, 16034977 - 16034883
Alignment:
Q  47 actggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaacttg 141  Q
    ||||| ||| ||||||||| | || ||||| || |||||||||| ||| |||||||| ||||| || ||||| |||||| |  ||||||||||||    
T  16034977 actggtcaagcgttgttccgcctgaaaatcgaacccggtattcctcggatacgtccttggaaggagttccttaccactgaagtccaagcaacttg 16034883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 47 - 140
Target Start/End: Complemental strand, 24179608 - 24179518
Alignment:
Q  47 actggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaactt 140  Q
    ||||||||||||||||||||||  ||| || || ||||||||| | ||||||||||| ||||| ||||| |||||||| || ||||| ||||||    
T  24179608 actggccaaacgttgttcccctgagaa-tcgaa-ccggtattc-atgggtacgtccttggaaggagctctttgccactagagcccaaacaactt 24179518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 47 - 144
Target Start/End: Original strand, 40968981 - 40969078
Alignment:
Q  47 actggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaacttggtt 144  Q
    |||| ||||||||||||  || |||||||| || ||||||||||  | | ||||||| ||||  | ||| |||||||| || ||||||||||||||||    
T  40968981 actgaccaaacgttgttttccctggaaatcgaacccggtattccctgagaacgtccttggaatgaactcattgccactagagcccaagcaacttggtt 40969078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 57; Significance: 1e-23; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 40 - 144
Target Start/End: Original strand, 5253282 - 5253386
Alignment:
Q  40 catgcgtactggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaact 139  Q
    |||||| |||||||||  |||||||||| ||| |||| || |||||||||| |||||||||||| ||||| |||||||||||| |||| |||||||||||    
T  5253282 catgcgcactggccaagtgttgttccccctgggaatcgaacccggtattccccgggtacgtccttggaaggagctccttgccattggagcccaagcaact 5253381  T
Q  140 tggtt 144  Q
    |||||    
T  5253382 tggtt 5253386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 40 - 144
Target Start/End: Complemental strand, 21898699 - 21898595
Alignment:
Q  40 catgcgtactggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaact 139  Q
    |||||| ||||||||| ||||||||| | ||| |||| || |||||||||| ||| |||||||| ||||| ||||||||||||||||| |||||||||||    
T  21898699 catgcgcactggccaagcgttgttcctcctgggaatcgaacccggtattccccggatacgtccttggaaggagctccttgccactggagcccaagcaact 21898600  T
Q  140 tggtt 144  Q
    |||||    
T  21898599 tggtt 21898595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 40 - 144
Target Start/End: Original strand, 29333198 - 29333301
Alignment:
Q  40 catgcgtactggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaact 139  Q
    |||||| |||||||||||||||||||||| ||||||| || ||||||||||  ||||||||||| ||||| ||||| |||||||| || ||||| |||||    
T  29333198 catgcgcactggccaaacgttgttcccct-ggaaatcgaacccggtattccctgggtacgtccttggaaggagctcattgccactagagcccaaacaact 29333296  T
Q  140 tggtt 144  Q
    |||||    
T  29333297 tggtt 29333301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 40 - 144
Target Start/End: Original strand, 19230618 - 19230720
Alignment:
Q  40 catgcgtactggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaact 139  Q
    ||||| ||||| |||| |||||||||| ||| ||||| ||||||||||||| || ||||||||| ||||| ||||||||||||||||| ||||| |||||    
T  19230618 catgcatactgaccaagcgttgttccc-ttgaaaatcgaatccggtattcc-cgagtacgtccttggaaggagctccttgccactggagcccaaacaact 19230715  T
Q  140 tggtt 144  Q
    |||||    
T  19230716 tggtt 19230720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 40 - 144
Target Start/End: Original strand, 29444824 - 29444928
Alignment:
Q  40 catgcgtactggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaact 139  Q
    |||||| ||||||||| ||||||||||| | |||||| || ||||||| || |||||||||| | ||||| |||||||||||||| || |||||| ||||    
T  29444824 catgcgcactggccaagcgttgttccccctagaaatcgaacccggtatcccccgggtacgtctttggaaggagctccttgccactagagcccaagtaact 29444923  T
Q  140 tggtt 144  Q
    |||||    
T  29444924 tggtt 29444928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 40 - 151
Target Start/End: Complemental strand, 12606481 - 12606370
Alignment:
Q  40 catgcgtactggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaact 139  Q
    |||||| ||||||||||||||||||||| |||||||| |||| |||||||| ||| ||||| || ||||| ||||| ||||||   || ||||||||| |    
T  12606481 catgcgcactggccaaacgttgttccccctggaaatcgaatctggtattccccggatacgttcttggaaggagctcattgccagcagagcccaagcaatt 12606382  T
Q  140 tggtttactttc 151  Q
    ||||||| ||||    
T  12606381 tggtttaatttc 12606370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 47 - 149
Target Start/End: Original strand, 8612040 - 8612142
Alignment:
Q  47 actggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaacttggttta 146  Q
    ||||| ||| ||||||||| | | | |||| || |||||||||| |||||||||||| ||||| |||||||||||||||||  |||| ||||||||||||    
T  8612040 actggtcaagcgttgttcctcctcggaatcgaacccggtattccccgggtacgtccttggaaggagctccttgccactggagtccaaacaacttggttta 8612139  T
Q  147 ctt 149  Q
    |||    
T  8612140 ctt 8612142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 58 - 144
Target Start/End: Original strand, 21016828 - 21016914
Alignment:
Q  58 gttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaacttggtt 144  Q
    ||||||| |||| | |||| || |||||||||| |||||||||||  ||||| ||||||||||||||||| ||||||||||||||||    
T  21016828 gttgttctccttaggaatcgaacccggtattccccgggtacgtccctggaaggagctccttgccactggagcccaagcaacttggtt 21016914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 40 - 145
Target Start/End: Original strand, 10311528 - 10311633
Alignment:
Q  40 catgcgtactggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaact 139  Q
    |||||| ||||||||| ||||||||||||||   ||| || |||||||||| ||| ||||| || ||||| |||||||||| |||||| ||||||||||     
T  10311528 catgcgcactggccaagcgttgttccccttgaggatcgaacccggtattccccggatacgttcttggaaggagctccttgctactggagcccaagcaaca 10311627  T
Q  140 tggttt 145  Q
    ||||||    
T  10311628 tggttt 10311633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 40 - 141
Target Start/End: Original strand, 13036063 - 13036164
Alignment:
Q  40 catgcgtactggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaact 139  Q
    |||||| |||||||||  |||||||||| || ||||| || ||| |||||| ||  |||||||| ||||| ||||||||||||||||| |||||||||||    
T  13036063 catgcgcactggccaagtgttgttccccctgaaaatcgaacccgatattccccgaatacgtccttggaaggagctccttgccactggagcccaagcaact 13036162  T
Q  140 tg 141  Q
    ||    
T  13036163 tg 13036164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 85 - 149
Target Start/End: Complemental strand, 5759634 - 5759570
Alignment:
Q  85 tattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaacttggtttactt 149  Q
    |||||| |||||||||||| ||||| || |||||||||||||| |||||||||||||||||||||    
T  5759634 tattcctcgggtacgtccttggaaggagttccttgccactggagcccaagcaacttggtttactt 5759570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 41 - 145
Target Start/End: Original strand, 9179796 - 9179900
Alignment:
Q  41 atgcgtactggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaactt 140  Q
    |||| |||||| |||  |||||||||| ||| |||| || ||||||||||  ||||||||||| ||||  ||||||||||||||||| ||||| ||||||    
T  9179796 atgcatactggtcaagtgttgttccccctgggaatcgaacccggtattccctgggtacgtccttggaatgagctccttgccactggagcccaaacaactt 9179895  T
Q  141 ggttt 145  Q
    |||||    
T  9179896 ggttt 9179900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 47 - 146
Target Start/End: Original strand, 6606163 - 6606262
Alignment:
Q  47 actggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaacttggttta 146  Q
    |||||||||  |||||||||| ||  |||| || |||||||||| ||| |||||||| ||||| |||||||||||||||   ||||||||||||||||||    
T  6606163 actggccaagtgttgttccccctgagaatcgaacccggtattccccggatacgtccttggaaggagctccttgccactgtggcccaagcaacttggttta 6606262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 47 - 149
Target Start/End: Original strand, 14107424 - 14107526
Alignment:
Q  47 actggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaacttggttta 146  Q
    ||||| ||| ||||||||| | ||| |||| || |||||||||| ||  |||||| | ||||| ||||||||||||||||| ||||| ||||||||||||    
T  14107424 actggtcaagcgttgttcctcctgggaatcgaacccggtattccccgaatacgtctttggaaggagctccttgccactggagcccaaacaacttggttta 14107523  T
Q  147 ctt 149  Q
    |||    
T  14107524 ctt 14107526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 81 - 145
Target Start/End: Original strand, 2271401 - 2271465
Alignment:
Q  81 ccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaacttggttt 145  Q
    |||||||||| ||  |||||||| ||||| ||||||||||||||||| |||||||||||||||||    
T  2271401 ccggtattccccgaatacgtccttggaaggagctccttgccactggagcccaagcaacttggttt 2271465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 47 - 145
Target Start/End: Original strand, 3588011 - 3588109
Alignment:
Q  47 actggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaacttggttt 145  Q
    ||||||||| ||||||||||||||| |||| || |||||||||  ||| |||||| | |||| || |||||||||||| || ||||| |||||| ||||    
T  3588011 actggccaagcgttgttccccttgggaatcgaacccggtattctccggatacgtctttggaataaactccttgccacttgagcccaaacaacttagttt 3588109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 47 - 144
Target Start/End: Complemental strand, 19089542 - 19089445
Alignment:
Q  47 actggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaacttggtt 144  Q
    |||||||||  |||||||||| ||| |||| || | |||||||| ||| |||||||| | ||  |||||||||| |||||| ||||||||||||||||    
T  19089542 actggccaagtgttgttccccctgggaatcaaacctggtattcctcggatacgtccttgaaatgagctccttgcgactggagcccaagcaacttggtt 19089445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 47 - 122
Target Start/End: Original strand, 34954685 - 34954760
Alignment:
Q  47 actggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgcca 122  Q
    ||||||||||||||||||||| ||  |||| || | |||||||| | |||||||||| ||||| ||||||||||||    
T  34954685 actggccaaacgttgttccccctgagaatcgaacctggtattccccaggtacgtccttggaaggagctccttgcca 34954760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 96 - 146
Target Start/End: Original strand, 24671981 - 24672031
Alignment:
Q  96 tacgtcctgggaagaagctccttgccactggaacccaagcaacttggttta 146  Q
    |||||||| | ||| ||||||||||||||||| ||||||||||||||||||    
T  24671981 tacgtccttgaaaggagctccttgccactggagcccaagcaacttggttta 24672031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 83 - 144
Target Start/End: Complemental strand, 13468941 - 13468880
Alignment:
Q  83 ggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaacttggtt 144  Q
    |||||||| ||| |||||||| ||||| |||||||||||||  || ||||||||||||||||    
T  13468941 ggtattccccggatacgtccttggaaggagctccttgccaccagagcccaagcaacttggtt 13468880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 96 - 145
Target Start/End: Original strand, 15643943 - 15643992
Alignment:
Q  96 tacgtcctgggaagaagctccttgccactggaacccaagcaacttggttt 145  Q
    |||||||| ||||  ||||||||||||||||| |||||||||||||||||    
T  15643943 tacgtccttggaatgagctccttgccactggagcccaagcaacttggttt 15643992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 141
Target Start/End: Complemental strand, 3601135 - 3601034
Alignment:
Q  40 catgcgtactggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaact 139  Q
    |||||| ||||||||| ||||||||||| ||  |||| || |||||||||| ||  |||||  | ||||  ||||| |||||||| || |||||||||||    
T  3601135 catgcgcactggccaagcgttgttccccctgagaatcgaaaccggtattccccgaatacgtatttggaaagagctctttgccactagagcccaagcaact 3601036  T
Q  140 tg 141  Q
    ||    
T  3601035 tg 3601034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 141
Target Start/End: Original strand, 13584509 - 13584609
Alignment:
Q  40 catgcgtactggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaact 139  Q
    |||||| ||||||||||||||||||  ||| | |||| || | |||||||| || ||||||||| ||||| || | ||||||||| || | |||||||||    
T  13584509 catgcgcactggccaaacgttgttcatcttaggaatcgaacctggtattcctcgagtacgtccttggaag-agtttcttgccactagagcacaagcaact 13584607  T
Q  140 tg 141  Q
    ||    
T  13584608 tg 13584609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 95 - 144
Target Start/End: Original strand, 17115011 - 17115060
Alignment:
Q  95 gtacgtcctgggaagaagctccttgccactggaacccaagcaacttggtt 144  Q
    ||||||||| ||||| |||| |||||||||||| ||||||||| ||||||    
T  17115011 gtacgtccttggaaggagcttcttgccactggagcccaagcaatttggtt 17115060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 140
Target Start/End: Original strand, 30788912 - 30789010
Alignment:
Q  40 catgcgtactggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaact 139  Q
    |||||| |||||||||||||||||||   ||  |||| || ||| |||||| ||| ||| |||| ||||| ||||||||||||||||   ||||||||||    
T  30788912 catgcgcactggccaaacgttgttcca--tgagaatcaaacccgatattccccggatacatccttggaaggagctccttgccactggggtccaagcaact 30789009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 47 - 140
Target Start/End: Complemental strand, 32048495 - 32048402
Alignment:
Q  47 actggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaactt 140  Q
    |||| ||||||||||||| || || ||||| |||| | |||||| || |||| |||| ||||| |||||||| ||||||||  |||| ||||||    
T  32048495 actgaccaaacgttgttctccctgaaaatcgaatctgatattcctcgagtacatccttggaaggagctccttaccactggagtccaaacaactt 32048402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 96 - 144
Target Start/End: Original strand, 3030733 - 3030781
Alignment:
Q  96 tacgtcctgggaagaagctccttgccactggaacccaagcaacttggtt 144  Q
    |||||||| ||||  ||||||||||||||||| ||||| ||||||||||    
T  3030733 tacgtccttggaatgagctccttgccactggagcccaaacaacttggtt 3030781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 40 - 144
Target Start/End: Complemental strand, 8932712 - 8932608
Alignment:
Q  40 catgcgtactggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaact 139  Q
    |||||| ||| |||||  |||||||||| ||| |||| || ||| |||||| ||| ||| |||| ||||| | |||||||||||||||   ||| |||||    
T  8932712 catgcgcactagccaagtgttgttccccctgggaatcgaacccgatattccccggatacatccttggaaggaactccttgccactggagttcaaacaact 8932613  T
Q  140 tggtt 144  Q
    |||||    
T  8932612 tggtt 8932608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 40 - 144
Target Start/End: Complemental strand, 8944178 - 8944074
Alignment:
Q  40 catgcgtactggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaact 139  Q
    |||||| ||| |||||  |||||||||| ||| |||| || ||| |||||| ||| ||| |||| ||||| | |||||||||||||||   ||| |||||    
T  8944178 catgcgcactagccaagtgttgttccccctgggaatcgaacccgatattccccggatacatccttggaaggaactccttgccactggagttcaaacaact 8944079  T
Q  140 tggtt 144  Q
    |||||    
T  8944078 tggtt 8944074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 54; Significance: 7e-22; HSPs: 50)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 47 - 144
Target Start/End: Complemental strand, 18915908 - 18915811
Alignment:
Q  47 actggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaacttggtt 144  Q
    |||||||||  |||||||||| ||| |||| || |||||||||| |||||||||||| ||||||||||||||||||||| | ||||| ||||||||||    
T  18915908 actggccaagtgttgttccccctgggaatcgaacccggtattccccgggtacgtccttggaagaagctccttgccactgaagcccaaacaacttggtt 18915811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 40 - 144
Target Start/End: Original strand, 40288537 - 40288641
Alignment:
Q  40 catgcgtactggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaact 139  Q
    ||||| |||||||||| ||||||||||| |||||||| || |||||||||| ||  |||||||| ||||  |||||||||||||| || |||||||||||    
T  40288537 catgcatactggccaaccgttgttccccctggaaatcgaacccggtattccccgaatacgtccttggaaagagctccttgccactcgagcccaagcaact 40288636  T
Q  140 tggtt 144  Q
    |||||    
T  40288637 tggtt 40288641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 40 - 152
Target Start/End: Complemental strand, 49078162 - 49078050
Alignment:
Q  40 catgcgtactggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaact 139  Q
    |||||| |||||||||  |||||| ||| ||| |||| || |||||||||| ||| ||||||||  |||| ||||||||||||||||| |||||||||||    
T  49078162 catgcgcactggccaagtgttgtttcccctgggaatcgaacccggtattccccggatacgtccttagaaggagctccttgccactggagcccaagcaact 49078063  T
Q  140 tggtttactttct 152  Q
    |||||| ||||||    
T  49078062 tggttttctttct 49078050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 40 - 145
Target Start/End: Complemental strand, 8764039 - 8763934
Alignment:
Q  40 catgcgtactggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaact 139  Q
    |||||| |||||||||  |||||||||| ||| || | || ||| |||||| |||||||||||| ||||| ||||||||||||| ||| |||||||||||    
T  8764039 catgcgcactggccaagtgttgttccccctgggaaacgaacccgatattccccgggtacgtccttggaaggagctccttgccacgggagcccaagcaact 8763940  T
Q  140 tggttt 145  Q
    ||||||    
T  8763939 tggttt 8763934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 40 - 145
Target Start/End: Original strand, 33418175 - 33418280
Alignment:
Q  40 catgcgtactggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaact 139  Q
    |||||| ||||||||| |||||| |||| | | |||| ||||||||||||  |||||||||| | ||||| ||||||||||||||||| ||||| |||||    
T  33418175 catgcgcactggccaagcgttgtcccccctaggaatcgaatccggtattctccgggtacgtctttggaaggagctccttgccactggagcccaaacaact 33418274  T
Q  140 tggttt 145  Q
    ||||||    
T  33418275 tggttt 33418280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 40 - 144
Target Start/End: Complemental strand, 5855570 - 5855466
Alignment:
Q  40 catgcgtactggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaact 139  Q
    |||||| ||||||||| ||||||||| | ||| |||| || |||||||||| ||  |||||||| ||||| ||||||||||||||||| ||||| |||||    
T  5855570 catgcgcactggccaagcgttgttcctcctgggaatcgaacccggtattccccgaatacgtccttggaaggagctccttgccactggagcccaaacaact 5855471  T
Q  140 tggtt 144  Q
    |||||    
T  5855470 tggtt 5855466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 49 - 144
Target Start/End: Original strand, 11397958 - 11398052
Alignment:
Q  49 tggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaacttggtt 144  Q
    |||||||||||||||||||| |||| || || |||||||||  ||| ||| |||| ||||| ||||||||||||||||| ||||||||||||||||    
T  11397958 tggccaaacgttgttcccctcggaa-tcgaacccggtattctccggatacatccttggaaggagctccttgccactggagcccaagcaacttggtt 11398052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 22 - 144
Target Start/End: Complemental strand, 51437535 - 51437413
Alignment:
Q  22 tggatgattaatccggctcatgcgtactggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgcc 121  Q
    ||||||| |||||||||||||||| ||||| ||| ||||||||||| ||| |||| || ||| |||||| ||| |||||||| | ||| ||||| ||| |    
T  51437535 tggatgactaatccggctcatgcgcactggtcaagcgttgttccccatgggaatcgaacccgatattcctcggatacgtccttgaaaggagctcattgtc 51437436  T
Q  122 actggaacccaagcaacttggtt 144  Q
    |||| | ||||| ||||||||||    
T  51437435 actgaagcccaaacaacttggtt 51437413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 40 - 144
Target Start/End: Complemental strand, 26660186 - 26660082
Alignment:
Q  40 catgcgtactggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaact 139  Q
    |||||||||||  |||| |||||||||| |||||||| || |||||||||| ||  |||||| |  |||||| ||| ||||||||||| |||||||||||    
T  26660186 catgcgtactgatcaaatgttgttccccgtggaaatcgaacccggtattccccgaatacgtcattcgaagaaactctttgccactggagcccaagcaact 26660087  T
Q  140 tggtt 144  Q
    |||||    
T  26660086 tggtt 26660082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 40 - 144
Target Start/End: Original strand, 33004075 - 33004179
Alignment:
Q  40 catgcgtactggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaact 139  Q
    |||||| ||||||||| | ||||| ||| |||||||| |||||| |||||| ||| |||||||| ||||| |||||||   ||||||| |||||||||||    
T  33004075 catgcgcactggccaagcattgtttcccctggaaatcgaatccgatattccccggatacgtccttggaaggagctcctcatcactggagcccaagcaact 33004174  T
Q  140 tggtt 144  Q
    |||||    
T  33004175 tggtt 33004179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 40 - 143
Target Start/End: Original strand, 41663916 - 41664019
Alignment:
Q  40 catgcgtactggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaact 139  Q
    |||||| |||| ||||  |||||||||| ||| |||| || |||||||||| ||| ||||||||  |||| ||||||||||||||||| ||||| |||||    
T  41663916 catgcgcactgaccaagtgttgttccccctgggaatcgaacccggtattccccggatacgtccttagaaggagctccttgccactggagcccaaacaact 41664015  T
Q  140 tggt 143  Q
    ||||    
T  41664016 tggt 41664019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 47 - 146
Target Start/End: Complemental strand, 45536749 - 45536651
Alignment:
Q  47 actggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaacttggttta 146  Q
    ||||||||| ||||||||||||| |||||| || |||||||||  |||||||||| | ||||| || |||| |||||| || ||||||||||||||||||    
T  45536749 actggccaagcgttgttccccttagaaatcgaacccggtattctccgggtacgtcattggaag-agttcctcgccactagagcccaagcaacttggttta 45536651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 27 - 144
Target Start/End: Original strand, 8905198 - 8905314
Alignment:
Q  27 gattaatccggctcatgcgtactggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactgg 126  Q
    |||||||| |||||||||| ||||||||| ||||||||||||| ||||||  | ||| |||||  ||| |||||| | ||||| |||||||||||||| |    
T  8905198 gattaatctggctcatgcgcactggccaagcgttgttcccctt-gaaatcgtacccgatattctccggatacgtcattggaaggagctccttgccactag 8905296  T
Q  127 aacccaagcaacttggtt 144  Q
    |  |||| ||||||||||    
T  8905297 agtccaaacaacttggtt 8905314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 40 - 145
Target Start/End: Original strand, 43959881 - 43959986
Alignment:
Q  40 catgcgtactggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaact 139  Q
    |||||| ||||||||| ||||||||||| ||| |||  || ||| |||||| |||||||||| | ||||| ||| ||||||||||||| ||||| |||||    
T  43959881 catgcgcactggccaagcgttgttccccctgggaattgaacccgatattccccgggtacgtcattggaaggagcaccttgccactggagcccaatcaact 43959980  T
Q  140 tggttt 145  Q
    | ||||    
T  43959981 tagttt 43959986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 49 - 145
Target Start/End: Original strand, 15238175 - 15238271
Alignment:
Q  49 tggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaacttggttt 145  Q
    ||||||| ||||| ||||| ||| |||| || ||| ||||||   |||||||||| ||||| |||||||||||| |||| |||||||||||||||||    
T  15238175 tggccaagcgttgctccccctgggaatcgaacccgatattccctaggtacgtccttggaaggagctccttgccattggagcccaagcaacttggttt 15238271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 81 - 145
Target Start/End: Complemental strand, 41743280 - 41743216
Alignment:
Q  81 ccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaacttggttt 145  Q
    |||||||||| ||| |||||||| ||||| ||||||||||||| ||| |||||||||||||||||    
T  41743280 ccggtattcctcggatacgtccttggaaggagctccttgccaccggagcccaagcaacttggttt 41743216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 40 - 144
Target Start/End: Original strand, 48798130 - 48798234
Alignment:
Q  40 catgcgtactggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaact 139  Q
    |||||| ||| | ||| ||||||||||| |||||||| || ||| |||||| ||| |||||| | ||||| ||||||||||||||||| ||| | |||||    
T  48798130 catgcgcactagtcaagcgttgttccccctggaaatcgaacccgatattccccggatacgtcattggaaggagctccttgccactggagccccaacaact 48798229  T
Q  140 tggtt 144  Q
    |||||    
T  48798230 tggtt 48798234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 40 - 146
Target Start/End: Original strand, 17642064 - 17642170
Alignment:
Q  40 catgcgtactggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaact 139  Q
    |||||| |||||||||  |||||||||| ||| |||| || || ||||| |  ||||||||||  ||||| ||||||||| ||||||| ||||| |||||    
T  17642064 catgcgcactggccaagtgttgttccccctgggaatcgaacccagtatttcctgggtacgtccgtggaaggagctccttgtcactggagcccaaacaact 17642163  T
Q  140 tggttta 146  Q
    |||||||    
T  17642164 tggttta 17642170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 40 - 146
Target Start/End: Complemental strand, 26325860 - 26325754
Alignment:
Q  40 catgcgtactggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaact 139  Q
    |||||| |||| ||||  |||||||||  ||| |||| || ||| |||||| ||| |||||||| | ||| ||||||||||||||||| ||| |||||||    
T  26325860 catgcgcactgaccaagtgttgttcccgctgggaatcgaacccgatattcctcggatacgtccttgaaaggagctccttgccactggagccctagcaact 26325761  T
Q  140 tggttta 146  Q
    |||||||    
T  26325760 tggttta 26325754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 47 - 141
Target Start/End: Original strand, 47312966 - 47313059
Alignment:
Q  47 actggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaacttg 141  Q
    |||||||||||||||||||||| |||| || || |||||||||| | | |||||||| ||||| | ||| ||||||||||| ||||| |||||||    
T  47312966 actggccaaacgttgttcccctaggaa-tcaaacccggtattccccagatacgtccttggaaggatctcgttgccactggagcccaaacaacttg 47313059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 47 - 144
Target Start/End: Original strand, 2980998 - 2981095
Alignment:
Q  47 actggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaacttggtt 144  Q
    |||||||||  |||||||||  ||| |||| || || ||||||| ||| |||||||  ||||| |||||||||||||| || ||||||||||||||||    
T  2980998 actggccaagtgttgttcccgctgggaatcgaacccagtattccccggatacgtccctggaaggagctccttgccactagagcccaagcaacttggtt 2981095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 40 - 145
Target Start/End: Original strand, 14254328 - 14254433
Alignment:
Q  40 catgcgtactggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaact 139  Q
    |||||||||||||||| ||||||||||| || ||||| ||  ||||||||| ||  |||||||| ||||  || |||||||| |||||  | ||||||||    
T  14254328 catgcgtactggccaagcgttgttccccctgaaaatcgaactcggtattccccgaatacgtccttggaatgagttccttgcccctggaggctaagcaact 14254427  T
Q  140 tggttt 145  Q
    ||||||    
T  14254428 tggttt 14254433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 73 - 146
Target Start/End: Complemental strand, 25165416 - 25165344
Alignment:
Q  73 aatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaacttggttta 146  Q
    |||| ||||||||||||| | |||||||| ||| ||| |||||||||||||| || ||||||||||||||||||    
T  25165416 aatcgaatccggtattccccaggtacgtcttgg-aaggagctccttgccactagagcccaagcaacttggttta 25165344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 40 - 125
Target Start/End: Original strand, 45361942 - 45362027
Alignment:
Q  40 catgcgtactggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactg 125  Q
    |||||| ||||||||| ||||||||| | ||  |||| || ||||||||||  ||||||||||| ||||| |||||||||||||||    
T  45361942 catgcgcactggccaagcgttgttcctcctgagaatcgaacccggtattcccagggtacgtccttggaaggagctccttgccactg 45362027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 40 - 140
Target Start/End: Original strand, 9659239 - 9659338
Alignment:
Q  40 catgcgtactggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaact 139  Q
    |||||| ||| | |||||||||||||||| |||| || || |||||||||| || |||||||||  |||  ||||||||||||||||| || ||||||||    
T  9659239 catgcgcactagtcaaacgttgttcccctgggaa-tcgaacccggtattccccgagtacgtccttagaatgagctccttgccactggagcctaagcaact 9659337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 40 - 132
Target Start/End: Complemental strand, 10336564 - 10336472
Alignment:
Q  40 catgcgtactggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaaccca 132  Q
    |||||| ||||| ||| ||||||||||| || ||||| || ||| |||||  ||| |||||| | ||||| ||||||||||||||||||||||    
T  10336564 catgcgcactggtcaagcgttgttccccctgaaaatcgaacccgatattctccggatacgtctttggaaggagctccttgccactggaaccca 10336472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 40 - 144
Target Start/End: Complemental strand, 10422836 - 10422732
Alignment:
Q  40 catgcgtactggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaact 139  Q
    |||||| |||||||||  |||||||| | | |||||| || |||||||||| ||  |||||| | ||||| ||||||||||||||| | ||||| |||||    
T  10422836 catgcgcactggccaagtgttgttcctcctagaaatcgaacccggtattccccgaatacgtcattggaaggagctccttgccactgtagcccaaacaact 10422737  T
Q  140 tggtt 144  Q
    |||||    
T  10422736 tggtt 10422732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 40 - 140
Target Start/End: Original strand, 32150982 - 32151082
Alignment:
Q  40 catgcgtactggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaact 139  Q
    |||||| |||| ||||| |||||||||| |||||||| || | | |||||| ||   ||||||| ||||| ||||||||||||||||| ||||| |||||    
T  32150982 catgcgcactgaccaaatgttgttccccctggaaatcgaacctgatattcctcgaaaacgtccttggaaggagctccttgccactggagcccaaacaact 32151081  T
Q  140 t 140  Q
    |    
T  32151082 t 32151082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 40 - 124
Target Start/End: Original strand, 34334355 - 34334439
Alignment:
Q  40 catgcgtactggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccact 124  Q
    |||||| |||||||||  |||||||||| ||| |||| || |||||||||| ||| |||||||| ||||  ||||||||||||||    
T  34334355 catgcgcactggccaagtgttgttccccctgggaatcgaacccggtattccccggatacgtccttggaatgagctccttgccact 34334439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 49 - 127
Target Start/End: Original strand, 30927796 - 30927874
Alignment:
Q  49 tggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactgga 127  Q
    ||||||| ||||||||||  |||||||| || ||| |||| | | |||||||||| ||||| |||||||||||||||||    
T  30927796 tggccaagcgttgttccctctggaaatcgaacccgatatttcccaggtacgtccttggaaggagctccttgccactgga 30927874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 47 - 145
Target Start/End: Complemental strand, 31152757 - 31152659
Alignment:
Q  47 actggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaacttggttt 145  Q
    |||| |||| |||| ||||||  ||||||| || ||||||||||  |||||| |||| ||||  |||||||||||||| || ||||| |||||||||||    
T  31152757 actgaccaagcgttattcccccgggaaatcgaacccggtattccctgggtacatccttggaaagagctccttgccactagagcccaaacaacttggttt 31152659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 96 - 146
Target Start/End: Original strand, 40226358 - 40226408
Alignment:
Q  96 tacgtcctgggaagaagctccttgccactggaacccaagcaacttggttta 146  Q
    |||||||| ||||| ||||||||||||||| ||||||| ||||||||||||    
T  40226358 tacgtccttggaaggagctccttgccactgaaacccaatcaacttggttta 40226408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 81 - 143
Target Start/End: Complemental strand, 42744794 - 42744732
Alignment:
Q  81 ccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaacttggt 143  Q
    ||||||||||  ||||||||||| ||||| ||||| |||||||||||  ||||||||||||||    
T  42744794 ccggtattccctgggtacgtccttggaaggagctcattgccactggagtccaagcaacttggt 42744732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 47 - 136
Target Start/End: Complemental strand, 6563482 - 6563393
Alignment:
Q  47 actggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagca 136  Q
    ||||||||| ||||||||||| | | |||| || ||||| |||  ||||||| |||| ||||| |||||||||||||||||  |||||||    
T  6563482 actggccaagcgttgttccccctaggaatcgaacccggtgttcttcgggtacatccttggaaggagctccttgccactggagtccaagca 6563393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 40 - 145
Target Start/End: Original strand, 9853337 - 9853441
Alignment:
Q  40 catgcgtactggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaact 139  Q
    |||||| |||||  |||||||||| ||| | | |||| || ||||||||   ||||||| |||| ||||| ||||||||||||||||| ||||| |||||    
T  9853337 catgcgcactggtaaaacgttgtttcccctaggaatcgaacccggtattttccgggtacatccttggaaggagctccttgccactggagcccaa-caact 9853435  T
Q  140 tggttt 145  Q
    ||||||    
T  9853436 tggttt 9853441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 40 - 125
Target Start/End: Original strand, 32142906 - 32142990
Alignment:
Q  40 catgcgtactggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactg 125  Q
    |||||| |||||||||  |||||||||| || ||||| || ||||||||||| ||||||||||| ||||  ||||| |||||||||    
T  32142906 catgcgcactggccaagtgttgttccccctgaaaatcgaacccggtattcca-gggtacgtccttggaatgagctctttgccactg 32142990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 57 - 145
Target Start/End: Original strand, 937563 - 937650
Alignment:
Q  57 cgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaacttggttt 145  Q
    ||||||||||| ||| |||| || ||| |||||| || ||||||||| | ||||||||| ||| ||||||| ||||| |||||||||||    
T  937563 cgttgttccccctgggaatcgaacccg-tattcctcgagtacgtccttgaaagaagctcattgtcactggagcccaaacaacttggttt 937650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 68 - 140
Target Start/End: Original strand, 1764277 - 1764349
Alignment:
Q  68 ttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaactt 140  Q
    |||| |||| ||||||||||| | |||||||||||| ||||| ||||||||||||| | | ||||| ||||||    
T  1764277 ttgggaatcgaatccggtatttcccgggtacgtccttggaaggagctccttgccacagaagcccaaacaactt 1764349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 96 - 144
Target Start/End: Complemental strand, 5504023 - 5503975
Alignment:
Q  96 tacgtcctgggaagaagctccttgccactggaacccaagcaacttggtt 144  Q
    ||||| || ||||| ||||||||||||||||||||||| ||||||||||    
T  5504023 tacgttctcggaaggagctccttgccactggaacccaaacaacttggtt 5503975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 40 - 140
Target Start/End: Complemental strand, 31734336 - 31734237
Alignment:
Q  40 catgcgtactggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaact 139  Q
    |||||| ||||||||| ||||||| ||| | ||| || ||||| ||||||| ||||||| |||| |||||  ||||||||| |||| | |||||||||||    
T  31734336 catgcgcactggccaatcgttgtttcccctagaa-tcgaatccagtattcctcgggtacatccttggaaggtgctccttgctactgaagcccaagcaact 31734238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 78 - 141
Target Start/End: Original strand, 10173069 - 10173132
Alignment:
Q  78 aatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaacttg 141  Q
    ||||||||||||| | | |||||||| ||||| ||| ||||||||||||| ||||| |||||||    
T  10173069 aatccggtattccccagatacgtccttggaaggagcaccttgccactggagcccaaacaacttg 10173132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 47 - 146
Target Start/End: Complemental strand, 15466006 - 15465907
Alignment:
Q  47 actggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaacttggttta 146  Q
    |||| |||| ||||||||||| |||||||| || | |||||||| |   |||||||| ||||| ||| | ||| ||||||| ||||| ||||||||||||    
T  15466006 actgaccaagcgttgttccccctggaaatcgaacctggtattccccaaatacgtccttggaaggagccctttgtcactggagcccaaacaacttggttta 15465907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 73 - 144
Target Start/End: Complemental strand, 26258711 - 26258640
Alignment:
Q  73 aatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaacttggtt 144  Q
    |||| ||||||||||||| |||||||||| | ||||| |||||||| | ||| ||| |||| ||||||||||    
T  26258711 aatcgaatccggtattccccgggtacgtctttggaaggagctccttactacttgaatccaaacaacttggtt 26258640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 40 - 122
Target Start/End: Complemental strand, 16956514 - 16956432
Alignment:
Q  40 catgcgtactggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgcca 122  Q
    |||||| ||||| ||||||||||| ||| ||  || | ||  ||||||||| |||||||||||| ||||| ||||||||||||    
T  16956514 catgcgcactggtcaaacgttgttacccctgagaaccgaacacggtattccccgggtacgtccttggaaggagctccttgcca 16956432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 96 - 146
Target Start/End: Complemental strand, 18808257 - 18808207
Alignment:
Q  96 tacgtcctgggaagaagctccttgccactggaacccaagcaacttggttta 146  Q
    |||||||| ||||||| ||| ||||||||||| ||||| ||||||||||||    
T  18808257 tacgtccttggaagaaactcattgccactggagcccaaacaacttggttta 18808207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 40 - 146
Target Start/End: Complemental strand, 34878038 - 34877932
Alignment:
Q  40 catgcgtactggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaact 139  Q
    |||||| |||||||||  |||||||| | | | |||| || | |||||||| ||  |||||||| |||||  |||||||||||||| | ||||| |||||    
T  34878038 catgcgcactggccaagtgttgttccgcctaggaatcgaacctggtattccccgaatacgtccttggaaggtgctccttgccactgaagcccaaacaact 34877939  T
Q  140 tggttta 146  Q
    |||||||    
T  34877938 tggttta 34877932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 47 - 140
Target Start/End: Complemental strand, 32912 - 32819
Alignment:
Q  47 actggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaactt 140  Q
    |||| |||| ||||||||| | ||| ||||  | ||| |||||| | |||||||||| ||||| ||||| ||||||||||| ||||| ||||||    
T  32912 actgaccaagcgttgttcctcctgggaatcggacccgatattcccccggtacgtccttggaaggagctcattgccactggagcccaaacaactt 32819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 145
Target Start/End: Original strand, 12036804 - 12036909
Alignment:
Q  40 catgcgtactggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaact 139  Q
    |||||| ||||||||| | ||||||||| | | |||| || || ||||||    |||||||||| ||||| |||| |||||||| ||| ||||| |||||    
T  12036804 catgcgcactggccaagcattgttccccctaggaatcaaacccagtattctctaggtacgtccttggaaggagcttcttgccaccggagcccaaacaact 12036903  T
Q  140 tggttt 145  Q
    ||||||    
T  12036904 tggttt 12036909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 96 - 140
Target Start/End: Complemental strand, 14357747 - 14357703
Alignment:
Q  96 tacgtcctgggaagaagctccttgccactggaacccaagcaactt 140  Q
    |||||||| ||||||| ||||||||||||||| | ||||||||||    
T  14357747 tacgtccttggaagaaactccttgccactggagctcaagcaactt 14357703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 83 - 143
Target Start/End: Original strand, 45726536 - 45726596
Alignment:
Q  83 ggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaacttggt 143  Q
    |||||||| |||||||||||| ||| | || || |||| |||||| |||||||||||||||    
T  45726536 ggtattcctcgggtacgtccttggagggaggtctttgcaactggagcccaagcaacttggt 45726596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 50; Significance: 2e-19; HSPs: 3)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 41 - 146
Target Start/End: Complemental strand, 319471 - 319367
Alignment:
Q  41 atgcgtactggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaactt 140  Q
    ||||| ||||||||| ||||||||||| | |||||| || |||||||||| ||| |||||||| ||||| |||||||||||||||| | || ||||||||    
T  319471 atgcgcactggccaagcgttgttccccctagaaatcaaacccggtattccccggatacgtccttggaaggagctccttgccactgg-agcctagcaactt 319373  T
Q  141 ggttta 146  Q
    ||||||    
T  319372 ggttta 319367  T

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Target: scaffold0002; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 58 - 144
Target Start/End: Complemental strand, 602 - 516
Alignment:
Q  58 gttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaacttggtt 144  Q
    |||||||||| ||  |||| || |||||||||| |||||||||||| ||||| |||||||||||||| || ||||||||||||||||    
T  602 gttgttccccctgcgaatcgaacccggtattccccgggtacgtccttggaaggagctccttgccactagagcccaagcaacttggtt 516  T

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Target: scaffold0002; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 47 - 144
Target Start/End: Original strand, 412092 - 412189
Alignment:
Q  47 actggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaacttggtt 144  Q
    |||| |||| ||||||||||| ||  |||| ||  ||||||||| ||| |||||||| ||||| ||||| | ||||||| | ||||||||||||||||    
T  412092 actgaccaagcgttgttccccctgtgaatcgaactcggtattccccggatacgtccttggaaggagctcatcgccactgaagcccaagcaacttggtt 412189  T

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Target: scaffold0170 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0170
Description:

Target: scaffold0170; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 40 - 146
Target Start/End: Complemental strand, 9895 - 9789
Alignment:
Q  40 catgcgtactggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaact 139  Q
    |||||| ||||||||| ||||||||||| |||||||| ||||||||||||| | | ||| |||| ||||| ||||||||| |||||||  | || |||||    
T  9895 catgcgcactggccaagcgttgttccccctggaaatcgaatccggtattcctcagatacatccttggaaggagctccttgtcactggagtcaaaacaact 9796  T
Q  140 tggttta 146  Q
    |||||||    
T  9795 tggttta 9789  T

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Target: scaffold0384 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0384
Description:

Target: scaffold0384; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 47 - 144
Target Start/End: Complemental strand, 6015 - 5919
Alignment:
Q  47 actggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaacttggtt 144  Q
    ||||||||| |||||| ||||| ||||||| || || ||||||| |||||||| ||| | ||| |||||||||||||| |||||||||||||||||||    
T  6015 actggccaagcgttgtccccct-ggaaatcgaacccagtattccccgggtacgcccttgaaaggagctccttgccactagaacccaagcaacttggtt 5919  T

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Target: scaffold0006 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 52 - 149
Target Start/End: Complemental strand, 68555 - 68458
Alignment:
Q  52 ccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaacttggtttactt 149  Q
    |||| ||||||||||| ||| |||| || ||| |||| | |||||||||||| ||||| |||||||||||||| || ||||| |||||||||||||||    
T  68555 ccaagcgttgttccccctgggaatcgaacccgatatttcccgggtacgtccttggaaggagctccttgccactagagcccaaacaacttggtttactt 68458  T

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Target: scaffold0005 (Bit Score: 45; Significance: 2e-16; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 40 - 144
Target Start/End: Original strand, 271133 - 271237
Alignment:
Q  40 catgcgtactggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaact 139  Q
    |||||| |||| |||| ||||||||||| ||| |||| || ||| |||||  |||||||||||| ||||| |||||||||||||  || |||||||||||    
T  271133 catgcgcactgaccaagcgttgttccccctgggaatcgaacccgatattctccgggtacgtccttggaaggagctccttgccaccagagcccaagcaact 271232  T
Q  140 tggtt 144  Q
    |||||    
T  271233 tggtt 271237  T

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Target: scaffold0005; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 86 - 145
Target Start/End: Original strand, 250118 - 250177
Alignment:
Q  86 attccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaacttggttt 145  Q
    ||||| |||||||||||| ||||  ||||||||||||||||| |||||||||||||||||    
T  250118 attccccgggtacgtccttggaatgagctccttgccactggagcccaagcaacttggttt 250177  T

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Target: scaffold0316 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 40 - 143
Target Start/End: Original strand, 1673 - 1776
Alignment:
Q  40 catgcgtactggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaact 139  Q
    |||||| |||||| || ||||||||||| |||||||| || | |||||||| | || ||||| | ||||| |||||||||||||| ||  ||||||||||    
T  1673 catgcgcactggctaatcgttgttccccctggaaatcgaacctggtattccccaggcacgtcattggaaggagctccttgccacttgagtccaagcaact 1772  T
Q  140 tggt 143  Q
    ||||    
T  1773 tggt 1776  T

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Target: scaffold0376 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0376
Description:

Target: scaffold0376; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 47 - 149
Target Start/End: Complemental strand, 12713 - 12611
Alignment:
Q  47 actggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaacttggttta 146  Q
    ||||||||| ||||||||| | |   |||| || |||||||||| |||| ||||||| ||||| |||| ||||||||| ||  |||||||||||||||||    
T  12713 actggccaagcgttgttcctcctctgaatcgaacccggtattccccgggcacgtccttggaaggagcttcttgccactagagtccaagcaacttggttta 12614  T
Q  147 ctt 149  Q
    |||    
T  12613 ctt 12611  T

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Target: scaffold0009 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 46 - 144
Target Start/End: Complemental strand, 9480 - 9382
Alignment:
Q  46 tactggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaacttggtt 144  Q
    |||||||||| ||||||||||| ||| |||| || |||||||||| |  ||||||||| | ||| |||||||||  || ||| ||||||||||||||||    
T  9480 tactggccaagcgttgttccccctgggaatcgaacccggtattccccaagtacgtccttgaaaggagctccttgttaccggagcccaagcaacttggtt 9382  T

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Target: scaffold0050 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 40 - 119
Target Start/End: Complemental strand, 72682 - 72604
Alignment:
Q  40 catgcgtactggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttg 119  Q
    |||||| ||||| ||| |||||||||||||||||||| || |||||||||| | | |||||||| ||||| |||||||||    
T  72682 catgcgcactggtcaagcgttgttccccttggaaatcgaacccggtattcc-ctgatacgtccttggaaggagctccttg 72604  T

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Target: scaffold0079 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 40 - 114
Target Start/End: Complemental strand, 8224 - 8151
Alignment:
Q  40 catgcgtactggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagct 114  Q
    |||||| ||||||||| |||||||||| |||| |||| || |||||||||| |||||||||||| ||||| ||||    
T  8224 catgcgcactggccaagcgttgttccc-ttgggaatcgaacccggtattccccgggtacgtccttggaaggagct 8151  T

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Target: scaffold0029 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 58 - 144
Target Start/End: Complemental strand, 41076 - 40990
Alignment:
Q  58 gttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaacttggtt 144  Q
    |||||||||||||  |||| || ||| ||||||  | ||||||||  ||||| ||||||||||||||||| ||||| ||||||||||    
T  41076 gttgttccccttgagaatcgaacccgatattccctgagtacgtccatggaaggagctccttgccactggagcccaaacaacttggtt 40990  T

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Target: scaffold0341 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0341
Description:

Target: scaffold0341; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 47 - 136
Target Start/End: Complemental strand, 18675 - 18586
Alignment:
Q  47 actggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagca 136  Q
    ||||||||| ||||||||||| | | |||| || ||||| |||  ||||||| |||| ||||| |||||||||||||||||  |||||||    
T  18675 actggccaagcgttgttccccctaggaatcgaacccggtgttcttcgggtacatccttggaaggagctccttgccactggagtccaagca 18586  T

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Target: scaffold0209 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0209
Description:

Target: scaffold0209; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 40 - 144
Target Start/End: Complemental strand, 12623 - 12521
Alignment:
Q  40 catgcgtactggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaact 139  Q
    |||||| ||||| ||| ||||||||||  | | |||| || |||||||| | || ||||||||| ||||| |||||||||||||| || ||||| |||||    
T  12623 catgcgcactggtcaagcgttgttccc--taggaatcgaacccggtatttctcgagtacgtccttggaagtagctccttgccactagagcccaaacaact 12526  T
Q  140 tggtt 144  Q
    |||||    
T  12525 tggtt 12521  T

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Target: scaffold0086 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 47 - 144
Target Start/End: Complemental strand, 26226 - 26129
Alignment:
Q  47 actggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaacttggtt 144  Q
    ||||||||| ||||||||||| |||||||| || || ||||||| | |||| |||||  |||| || | ||||||||| ||  |||||||||||||||    
T  26226 actggccaagcgttgttccccctggaaatcgaacccagtattccccaggtatgtccttagaaggagtttcttgccactagagtccaagcaacttggtt 26129  T

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Target: scaffold0332 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0332
Description:

Target: scaffold0332; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 69 - 141
Target Start/End: Complemental strand, 15352 - 15280
Alignment:
Q  69 tggaaatctaatccggtattccacgggtacgtcctgggaagaagctccttgccactggaacccaagcaacttg 141  Q
    |||||||| || |||||||||| ||||||| |||| | ||| |||||||||||||| || ||||| |||||||    
T  15352 tggaaatcgaacccggtattccccgggtacttccttgtaaggagctccttgccactagagcccaaacaacttg 15280  T

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Target: scaffold0016 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 96 - 144
Target Start/End: Original strand, 8825 - 8873
Alignment:
Q  96 tacgtcctgggaagaagctccttgccactggaacccaagcaacttggtt 144  Q
    |||||||| ||||| ||||||||||||||||| ||||| ||||||||||    
T  8825 tacgtccttggaaggagctccttgccactggagcccaaacaacttggtt 8873  T

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Target: scaffold0004 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 40 - 103
Target Start/End: Original strand, 7894 - 7957
Alignment:
Q  40 catgcgtactggccaaacgttgttccccttggaaatctaatccggtattccacgggtacgtcct 103  Q
    |||||| |||||||||  ||| |||||||||| |||| || |||||||||| ||||||||||||    
T  7894 catgcgcactggccaagtgtttttccccttgggaatcaaacccggtattccccgggtacgtcct 7957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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