View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11940_low_14 (Length: 495)

Name: NF11940_low_14
Description: NF11940
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11940_low_14
NF11940_low_14
[»] chr6 (38 HSPs)
chr6 (101-475)||(25466057-25466431)
chr6 (101-476)||(17695008-17695382)
chr6 (101-476)||(13883128-13883500)
chr6 (101-476)||(31248871-31249243)
chr6 (101-476)||(35201483-35201855)
chr6 (101-476)||(13878380-13878752)
chr6 (100-476)||(26887381-26887755)
chr6 (114-476)||(25941330-25941669)
chr6 (101-476)||(16785572-16785944)
chr6 (101-476)||(22352009-22352386)
chr6 (107-476)||(22342958-22343329)
chr6 (156-476)||(33215533-33215852)
chr6 (101-367)||(30974963-30975228)
chr6 (101-367)||(30981402-30981667)
chr6 (101-367)||(30987566-30987831)
chr6 (101-393)||(35208801-35209090)
chr6 (292-476)||(13467620-13467803)
chr6 (99-476)||(26642827-26643201)
chr6 (99-476)||(26748793-26749167)
chr6 (330-476)||(3577671-3577817)
chr6 (370-476)||(17035974-17036080)
chr6 (353-476)||(19702019-19702143)
chr6 (101-322)||(26084725-26084945)
chr6 (306-476)||(5165972-5166141)
chr6 (383-476)||(12166303-12166397)
chr6 (101-322)||(26064756-26064976)
chr6 (101-336)||(28241626-28241860)
chr6 (101-185)||(1230683-1230767)
chr6 (350-473)||(24542834-24542956)
chr6 (246-322)||(1230568-1230643)
chr6 (101-147)||(33215499-33215545)
chr6 (348-476)||(7293834-7293960)
chr6 (101-182)||(13467955-13468036)
chr6 (101-149)||(14507668-14507716)
chr6 (358-431)||(17904559-17904632)
chr6 (418-475)||(12911605-12911662)
chr6 (101-176)||(15533145-15533220)
chr6 (360-431)||(30445562-30445633)
[»] chr4 (44 HSPs)
chr4 (101-476)||(18586616-18586991)
chr4 (101-476)||(31300074-31300449)
chr4 (100-476)||(16489000-16489374)
chr4 (99-476)||(8528916-8529292)
chr4 (101-476)||(11853202-11853574)
chr4 (107-476)||(15830819-15831166)
chr4 (101-476)||(4556216-4556585)
chr4 (101-476)||(15316630-15316983)
chr4 (101-476)||(4884531-4884899)
chr4 (101-476)||(16689097-16689472)
chr4 (101-476)||(15311994-15312341)
chr4 (101-476)||(25699401-25699774)
chr4 (101-336)||(40636868-40637102)
chr4 (260-476)||(4569907-4570119)
chr4 (305-476)||(13072138-13072307)
chr4 (316-476)||(16638692-16638852)
chr4 (353-476)||(47566394-47566518)
chr4 (343-476)||(55822159-55822290)
chr4 (379-476)||(7050414-7050511)
chr4 (353-476)||(4558212-4558336)
chr4 (352-476)||(36769379-36769504)
chr4 (353-476)||(36771297-36771421)
chr4 (107-322)||(8631742-8631956)
chr4 (348-465)||(26557636-26557752)
chr4 (101-336)||(47868195-47868429)
chr4 (353-476)||(25614077-25614200)
chr4 (101-186)||(6764654-6764739)
chr4 (358-476)||(16185993-16186110)
chr4 (348-476)||(3982336-3982462)
chr4 (352-476)||(4874636-4874760)
chr4 (107-186)||(2485308-2485386)
chr4 (101-154)||(26086239-26086292)
chr4 (350-448)||(32274087-32274184)
chr4 (246-336)||(6764778-6764867)
chr4 (382-476)||(5336939-5337035)
chr4 (246-336)||(2485178-2485269)
chr4 (292-365)||(7050499-7050568)
chr4 (113-175)||(7050728-7050790)
chr4 (358-431)||(9022367-9022440)
chr4 (305-339)||(36769301-36769335)
chr4 (107-149)||(37089866-37089908)
chr4 (101-149)||(3825064-3825112)
chr4 (101-149)||(7941133-7941181)
chr4 (101-176)||(16631068-16631143)
[»] chr8 (29 HSPs)
chr8 (101-476)||(9021264-9021638)
chr8 (101-476)||(29554942-29555317)
chr8 (101-476)||(25684296-25684668)
chr8 (109-476)||(28895161-28895527)
chr8 (101-476)||(28327561-28327933)
chr8 (101-476)||(590466-590819)
chr8 (101-472)||(4812648-4813018)
chr8 (101-476)||(21033520-21033895)
chr8 (109-476)||(16752679-16753044)
chr8 (101-476)||(28332284-28332656)
chr8 (101-476)||(16757424-16757776)
chr8 (101-476)||(23179718-23180091)
chr8 (291-476)||(3276184-3276369)
chr8 (353-476)||(33032556-33032679)
chr8 (310-476)||(2267180-2267346)
chr8 (353-476)||(17799581-17799704)
chr8 (353-476)||(30423113-30423237)
chr8 (352-468)||(26268395-26268511)
chr8 (109-336)||(22684971-22685197)
chr8 (310-476)||(15949394-15949559)
chr8 (348-476)||(17847576-17847703)
chr8 (107-217)||(3275958-3276069)
chr8 (310-447)||(15944733-15944869)
chr8 (310-476)||(28228376-28228539)
chr8 (305-354)||(17799720-17799769)
chr8 (428-476)||(6376118-6376166)
chr8 (348-451)||(33021079-33021183)
chr8 (435-476)||(13985237-13985277)
chr8 (435-476)||(33839079-33839119)
[»] chr2 (33 HSPs)
chr2 (101-476)||(12781378-12781751)
chr2 (101-476)||(20050179-20050554)
chr2 (99-476)||(20054922-20055302)
chr2 (101-476)||(22717382-22717756)
chr2 (101-476)||(33674562-33674936)
chr2 (101-476)||(30478666-30479019)
chr2 (101-476)||(22712673-22713026)
chr2 (101-452)||(35894442-35894771)
chr2 (108-476)||(45567069-45567434)
chr2 (101-476)||(2740594-2740966)
chr2 (101-476)||(39679698-39680070)
chr2 (101-476)||(39686636-39687008)
chr2 (101-476)||(2735858-2736230)
chr2 (101-476)||(27517796-27518151)
chr2 (101-476)||(17462088-17462461)
chr2 (226-476)||(17932410-17932659)
chr2 (246-476)||(17943334-17943562)
chr2 (96-476)||(37170909-37171288)
chr2 (101-476)||(38190649-38191022)
chr2 (101-217)||(17943210-17943326)
chr2 (348-472)||(33603892-33604015)
chr2 (246-336)||(45280290-45280379)
chr2 (107-186)||(5377866-5377944)
chr2 (425-476)||(28458986-28459037)
chr2 (101-147)||(45280457-45280503)
chr2 (246-322)||(5377752-5377827)
chr2 (156-217)||(17932361-17932422)
chr2 (415-476)||(20589727-20589788)
chr2 (352-444)||(30261962-30262053)
chr2 (102-147)||(17932328-17932373)
chr2 (435-476)||(17921755-17921795)
chr2 (101-149)||(19502502-19502550)
chr2 (107-147)||(27104521-27104561)
[»] chr3 (63 HSPs)
chr3 (101-472)||(5858197-5858567)
chr3 (102-476)||(54188160-54188534)
chr3 (101-476)||(10896655-10897030)
chr3 (107-476)||(29914110-29914478)
chr3 (101-476)||(16461853-16462228)
chr3 (117-476)||(10612935-10613293)
chr3 (101-476)||(47878328-47878681)
chr3 (101-476)||(10208157-10208530)
chr3 (109-476)||(10201111-10201476)
chr3 (101-476)||(10100248-10100621)
chr3 (101-476)||(10094231-10094598)
chr3 (226-476)||(54193001-54193251)
chr3 (101-476)||(10595191-10595541)
chr3 (155-476)||(6303017-6303335)
chr3 (156-476)||(27543980-27544298)
chr3 (101-476)||(47883039-47883412)
chr3 (101-476)||(11079169-11079542)
chr3 (101-476)||(4535262-4535639)
chr3 (101-309)||(22627488-22627695)
chr3 (260-476)||(27762143-27762355)
chr3 (304-476)||(22626141-22626312)
chr3 (292-476)||(10949417-10949598)
chr3 (302-476)||(20031475-20031645)
chr3 (264-476)||(38002684-38002894)
chr3 (107-273)||(29963465-29963631)
chr3 (127-409)||(48390444-48390725)
chr3 (101-336)||(51727309-51727543)
chr3 (353-466)||(3329794-3329908)
chr3 (101-336)||(4308584-4308818)
chr3 (101-217)||(54192897-54193013)
chr3 (101-336)||(25690659-25690893)
chr3 (313-476)||(16996737-16996900)
chr3 (101-336)||(27101563-27101797)
chr3 (311-476)||(13893322-13893487)
chr3 (101-322)||(9604929-9605150)
chr3 (334-472)||(7417953-7418085)
chr3 (101-322)||(35918266-35918486)
chr3 (101-217)||(20031764-20031882)
chr3 (100-186)||(43225826-43225912)
chr3 (311-476)||(26762894-26763063)
chr3 (101-216)||(10949694-10949810)
chr3 (102-186)||(29956218-29956302)
chr3 (102-186)||(30005373-30005457)
chr3 (101-166)||(10901398-10901463)
chr3 (246-322)||(29956529-29956604)
chr3 (246-322)||(30005684-30005759)
chr3 (246-322)||(43228156-43228231)
chr3 (101-175)||(27762483-27762557)
chr3 (101-146)||(43228032-43228077)
chr3 (246-322)||(43225951-43226026)
chr3 (350-452)||(15823791-15823892)
chr3 (348-465)||(27703338-27703455)
chr3 (101-149)||(6302984-6303032)
chr3 (358-476)||(7768559-7768672)
chr3 (101-149)||(27543946-27543994)
chr3 (101-176)||(45882659-45882734)
chr3 (101-151)||(25388618-25388668)
chr3 (356-476)||(46966807-46966925)
chr3 (102-147)||(5191374-5191419)
chr3 (283-336)||(27101488-27101540)
chr3 (101-149)||(7606915-7606963)
chr3 (101-149)||(22114794-22114842)
chr3 (99-147)||(53896708-53896756)
[»] chr7 (37 HSPs)
chr7 (100-476)||(44512682-44513058)
chr7 (107-476)||(25351011-25351378)
chr7 (107-476)||(25356705-25357072)
chr7 (100-476)||(34547020-34547374)
chr7 (101-476)||(25405046-25405418)
chr7 (101-475)||(7464676-7465029)
chr7 (101-476)||(7069433-7069805)
chr7 (107-476)||(3320207-3320573)
chr7 (101-476)||(7074440-7074812)
chr7 (107-476)||(25409809-25410155)
chr7 (107-476)||(3324955-3325321)
chr7 (101-476)||(30246642-30246995)
chr7 (260-476)||(44144023-44144236)
chr7 (305-475)||(44016819-44016989)
chr7 (308-476)||(8378661-8378829)
chr7 (305-475)||(44010908-44011078)
chr7 (260-476)||(42006476-42006688)
chr7 (156-476)||(2120626-2120924)
chr7 (323-476)||(15541152-15541304)
chr7 (101-217)||(8378833-8378949)
chr7 (353-476)||(21369543-21369667)
chr7 (15-98)||(9804339-9804422)
chr7 (370-476)||(1099591-1099697)
chr7 (107-328)||(40946080-40946300)
chr7 (311-476)||(6067357-6067522)
chr7 (15-75)||(9763759-9763819)
chr7 (101-175)||(44144364-44144438)
chr7 (99-147)||(48457439-48457487)
chr7 (246-335)||(48457544-48457632)
chr7 (358-476)||(6048890-6049002)
chr7 (362-476)||(26210565-26210672)
chr7 (99-147)||(2120590-2120638)
chr7 (435-476)||(12310173-12310213)
chr7 (101-149)||(3878322-3878370)
chr7 (358-431)||(11081527-11081600)
chr7 (406-450)||(1099717-1099761)
chr7 (101-149)||(40837213-40837261)
[»] chr1 (23 HSPs)
chr1 (101-476)||(9526117-9526491)
chr1 (101-476)||(9521367-9521740)
chr1 (107-476)||(21353503-21353851)
chr1 (101-476)||(2232262-2232622)
chr1 (292-476)||(25133914-25134096)
chr1 (101-476)||(2393439-2393812)
chr1 (353-476)||(4144840-4144963)
chr1 (305-476)||(3091263-3091433)
chr1 (386-476)||(2401378-2401468)
chr1 (341-476)||(14996931-14997065)
chr1 (317-476)||(46783010-46783168)
chr1 (101-186)||(2617280-2617365)
chr1 (101-185)||(2401642-2401726)
chr1 (101-172)||(23689313-23689384)
chr1 (101-182)||(25133681-25133762)
chr1 (249-335)||(13449856-13449941)
chr1 (246-336)||(2617403-2617490)
chr1 (303-339)||(2401489-2401525)
chr1 (101-149)||(20291280-20291328)
chr1 (305-354)||(4144979-4145028)
chr1 (101-149)||(6822775-6822823)
chr1 (101-149)||(13761577-13761625)
chr1 (101-149)||(51752104-51752152)
[»] scaffold0004 (1 HSPs)
scaffold0004 (100-476)||(188399-188754)
[»] chr5 (34 HSPs)
chr5 (101-476)||(25452146-25452520)
chr5 (101-476)||(2298158-2298528)
chr5 (101-476)||(22672504-22672859)
chr5 (107-476)||(1170470-1170836)
chr5 (101-475)||(1240078-1240452)
chr5 (101-476)||(40222414-40222788)
chr5 (101-476)||(35385609-35385962)
chr5 (101-446)||(42237954-42238298)
chr5 (263-476)||(25445305-25445521)
chr5 (292-474)||(17841408-17841589)
chr5 (305-476)||(11962590-11962759)
chr5 (305-476)||(10627217-10627389)
chr5 (353-476)||(31782614-31782738)
chr5 (306-476)||(16093448-16093617)
chr5 (310-476)||(26406630-26406795)
chr5 (100-336)||(6744800-6745035)
chr5 (101-336)||(6747044-6747278)
chr5 (100-336)||(10529404-10529639)
chr5 (334-476)||(28786289-28786429)
chr5 (101-336)||(4409797-4410031)
chr5 (313-476)||(25837970-25838132)
chr5 (107-336)||(39854230-39854458)
chr5 (101-184)||(25445219-25445302)
chr5 (330-466)||(25562458-25562592)
chr5 (358-476)||(4897731-4897850)
chr5 (379-476)||(13294711-13294814)
chr5 (414-476)||(15445428-15445493)
chr5 (101-151)||(31179883-31179933)
chr5 (358-476)||(2144722-2144835)
chr5 (100-149)||(2174679-2174728)
chr5 (101-149)||(21684921-21684969)
chr5 (101-149)||(25921944-25921992)
chr5 (358-414)||(29748357-29748412)
chr5 (101-149)||(34479924-34479972)
[»] scaffold0256 (1 HSPs)
scaffold0256 (101-476)||(15976-16350)
[»] scaffold0209 (1 HSPs)
scaffold0209 (101-476)||(17143-17496)
[»] scaffold0131 (1 HSPs)
scaffold0131 (107-476)||(30799-31166)
[»] scaffold0006 (1 HSPs)
scaffold0006 (118-476)||(224510-224844)
[»] scaffold1764 (1 HSPs)
scaffold1764 (101-406)||(1108-1391)
[»] scaffold0038 (1 HSPs)
scaffold0038 (101-336)||(41788-42022)
[»] scaffold0552 (2 HSPs)
scaffold0552 (101-186)||(1264-1349)
scaffold0552 (246-336)||(1136-1225)
[»] scaffold0025 (1 HSPs)
scaffold0025 (107-149)||(69785-69827)
[»] scaffold0127 (1 HSPs)
scaffold0127 (100-148)||(13007-13055)
[»] scaffold0068 (1 HSPs)
scaffold0068 (101-149)||(28941-28989)
[»] scaffold0016 (1 HSPs)
scaffold0016 (101-141)||(120569-120609)


Alignment Details
Target: chr6 (Bit Score: 311; Significance: 1e-175; HSPs: 38)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 311; E-Value: 1e-175
Query Start/End: Original strand, 101 - 475
Target Start/End: Complemental strand, 25466431 - 25466057
Alignment:
Q  101 tgtgacagttaacttaaaatcagaattctggagaatcgtgccacgatggagaaacatcgcgccacgattgttgaagtaagattctgaggaagctactgga 200  Q
    ||||| ||||||||||||||||||| ||| ||||||| ||||||||||||||| ||||| ||||| |||||||||| |||||||| ||||||||||||||    
T  25466431 tgtgagagttaacttaaaatcagaaatctagagaatcatgccacgatggagaagcatcgtgccacaattgttgaagcaagattctaaggaagctactgga 25466332  T
Q  201 aatttcgtgccacgatgaagccgcatcgtgccacgatggcatcgctgaagataaaaataaaacgtattttcagcatagatttgtttcagttttttaaggg 300  Q
    ||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  25466331 aatttcgtgccacgatgaagccgcatcatgccacgatggtatcgctgaagataaaaataaaacgtactttcagcatagatttgtttcagttttttaaggg 25466232  T
Q  301 tttactttccactataaatataagccttatatcagatgataaagtgtgtagaaaaacagggtttagaaaccaacatacaaactagggtttatagagaatt 400  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25466231 tttactttccactataaatataagccttgtatcagatgataaagtgtgtagaaaaacagggtttagaaaccaacatacaaactagggtttatagagaatt 25466132  T
Q  401 tctcttggcaacaacactaaggttgggattgttctgattcaccttgaacaaagcactattaggattgagtctctt 475  Q
    ||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| |||||||||||||||||||    
T  25466131 tctcttggcaacaacactaaggttgagattgttttgattcaccttgaacaaagcattattaggattgagtctctt 25466057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 300; E-Value: 1e-168
Query Start/End: Original strand, 101 - 476
Target Start/End: Complemental strand, 17695382 - 17695008
Alignment:
Q  101 tgtgacagttaacttaaaatcagaattctggagaatcgtgccacgatggagaaacatcgcgccacgattgttgaagtaagattctgaggaagctactgga 200  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||    
T  17695382 tgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatggagaagcatcgcgccacgattgttgaagcaagattctgaggaagctactgga 17695283  T
Q  201 aatttcgtgccacgatgaagccgcatcgtgccacgatggcatcgctgaagataaaaataaaacgtattttcagcatagatttgtttcagttttttaaggg 300  Q
    | ||| ||||||||||||||||||||||||||||||||||  |||||||||||    |||||||||||||||   |||||||||||||||||||||||||    
T  17695282 atttttgtgccacgatgaagccgcatcgtgccacgatggccgcgctgaagatatttttaaaacgtattttcaat-tagatttgtttcagttttttaaggg 17695184  T
Q  301 tttactttccactataaatataagccttatatcagatgataaagtgtgtagaaaaacagggtttagaaaccaacatacaaactagggtttatagagaatt 400  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17695183 tttactttccactataaatataagccttgtatcagatgataaagtgtgtagaaaaacagggtttagaaaccaacatacaaactagggtttatagagaatt 17695084  T
Q  401 tctcttggcaacaacactaaggttgggattgttctgattcaccttgaacaaagcactattaggattgagtctcttg 476  Q
    |||||||||||||| |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  17695083 tctcttggcaacaaaactagggttgggattgttttgattcaccttgaacaaagcactattaggattgagtctcttg 17695008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 238; E-Value: 1e-131
Query Start/End: Original strand, 101 - 476
Target Start/End: Original strand, 13883128 - 13883500
Alignment:
Q  101 tgtgacagttaacttaaaatcagaattctggagaatcgtgccacgatggagaaacatcgcgccacgattgttgaagtaagattctgaggaagctactgga 200  Q
    ||||| ||||||||||||||||||| ||||||| ||||||||||||||||||| |||||||||||||| ||||||| |||||||   |||||  ||||||    
T  13883128 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 13883227  T
Q  201 aatttcgtgccacgatgaagccgcatcgtgccacgatggcatcgctgaagataaaaataaaacgtattttcagcatagatttgtttcagttttttaaggg 300  Q
    |||||||||||||||||||||| ||||| ||||||||||   |||||||||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  13883228 aatttcgtgccacgatgaagcctcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcag-ttagatttgtttcagttttttaaggg 13883326  T
Q  301 tttactttccactataaatataagccttatatcagatgat-aaagtgtgtagaaaaacagggtttagaaaccaacatacaaactagggtttatagagaat 399  Q
    ||||||||||||||||||||  |||||| ||||||||||| |||||||||||||||||| |||||||  ||||||| |||||||||||||||||||||||    
T  13883327 tttactttccactataaata-cagccttgtatcagatgataaaagtgtgtagaaaaacaaggtttag--accaacaaacaaactagggtttatagagaat 13883423  T
Q  400 ttctcttggcaacaacactaaggttgggattgttctgattcaccttgaacaaagcactattaggattgagtctcttg 476  Q
     ||||||||||||||| ||| ||||||||||||| |||||||||||||||||| |||||||||||||||||||||||    
T  13883424 ctctcttggcaacaactctagggttgggattgttttgattcaccttgaacaaaacactattaggattgagtctcttg 13883500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 101 - 476
Target Start/End: Complemental strand, 31249243 - 31248871
Alignment:
Q  101 tgtgacagttaacttaaaatcagaattctggagaatcgtgccacgatggagaaacatcgcgccacgattgttgaagtaagattctgaggaagctactgga 200  Q
    ||||| ||||||||||||||||||| ||||||| ||||||||||||||||||| |||||||||||||| ||||||| |||||||   |||||  ||||||    
T  31249243 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 31249144  T
Q  201 aatttcgtgccacgatgaagccgcatcgtgccacgatggcatcgctgaagataaaaataaaacgtattttcagcatagatttgtttcagttttttaaggg 300  Q
    |||||||||||||||||||| | ||||| ||||||||||   |||||||||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  31249143 aatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcag-ttagatttgtttcagttttttaaggg 31249045  T
Q  301 tttactttccactataaatataagccttatatcagatgat-aaagtgtgtagaaaaacagggtttagaaaccaacatacaaactagggtttatagagaat 399  Q
    ||||||||||||||||||||  |||||| ||||||||||| |||||||||||||||||| |||||||  ||||||| |||||||||||||||||||||||    
T  31249044 tttactttccactataaata-cagccttgtatcagatgataaaagtgtgtagaaaaacaaggtttag--accaacaaacaaactagggtttatagagaat 31248948  T
Q  400 ttctcttggcaacaacactaaggttgggattgttctgattcaccttgaacaaagcactattaggattgagtctcttg 476  Q
     ||||||||||||||| ||| ||||||||||||| |||||||||||||||||| |||||||||||||||||||||||    
T  31248947 ctctcttggcaacaactctagggttgggattgttttgattcaccttgaacaaaacactattaggattgagtctcttg 31248871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 101 - 476
Target Start/End: Complemental strand, 35201855 - 35201483
Alignment:
Q  101 tgtgacagttaacttaaaatcagaattctggagaatcgtgccacgatggagaaacatcgcgccacgattgttgaagtaagattctgaggaagctactgga 200  Q
    ||||| ||||||||||||||||||| ||||||| ||||||||||||||||||| |||||||||||||| ||||||| |||||||   |||||  ||||||    
T  35201855 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 35201756  T
Q  201 aatttcgtgccacgatgaagccgcatcgtgccacgatggcatcgctgaagataaaaataaaacgtattttcagcatagatttgtttcagttttttaaggg 300  Q
    |||||||||||||||||||| | ||||| ||||||||||   |||||||||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  35201755 aatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcag-ttagatttgtttcagttttttaaggg 35201657  T
Q  301 tttactttccactataaatataagccttatatcagatgat-aaagtgtgtagaaaaacagggtttagaaaccaacatacaaactagggtttatagagaat 399  Q
    ||||||||||||||||||||  |||||| ||||||||||| |||||||||||||||||| |||||||  ||||||| |||||||||||||||||||||||    
T  35201656 tttactttccactataaata-cagccttgtatcagatgataaaagtgtgtagaaaaacaaggtttag--accaacaaacaaactagggtttatagagaat 35201560  T
Q  400 ttctcttggcaacaacactaaggttgggattgttctgattcaccttgaacaaagcactattaggattgagtctcttg 476  Q
     ||||||||||||||| ||| ||||||||||||| |||||||||||||||||| |||||||||||||||||||||||    
T  35201559 ctctcttggcaacaactctagggttgggattgttttgattcaccttgaacaaaacactattaggattgagtctcttg 35201483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 101 - 476
Target Start/End: Original strand, 13878380 - 13878752
Alignment:
Q  101 tgtgacagttaacttaaaatcagaattctggagaatcgtgccacgatggagaaacatcgcgccacgattgttgaagtaagattctgaggaagctactgga 200  Q
    ||||| ||||||||||||||||||| ||||||| ||||||||| ||||||||| |||||||||||||| ||||||| |||||||   |||||||||||||    
T  13878380 tgtgagagttaacttaaaatcagaaatctggagcatcgtgccatgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagctactgga 13878479  T
Q  201 aatttcgtgccacgatgaagccgcatcgtgccacgatggcatcgctgaagataaaaataaaacgtattttcagcatagatttgtttcagttttttaaggg 300  Q
    ||  ||||||||||||||||| |  ||||||||||||||   |||||||||||||||||||||||||||||||  |||||||||||||||||| ||||||    
T  13878480 aaaatcgtgccacgatgaagcagggtcgtgccacgatggtcgcgctgaagataaaaataaaacgtattttcag-ttagatttgtttcagttttataaggg 13878578  T
Q  301 tttactttccactataaatataagccttatatcagatgat-aaagtgtgtagaaaaacagggtttagaaaccaacatacaaactagggtttatagagaat 399  Q
    ||||||||||||||||||||  |||||| ||||||||||| |||||||||||||||||| |||||||  ||||||| |||||||||||||||||||||||    
T  13878579 tttactttccactataaata-cagccttgtatcagatgataaaagtgtgtagaaaaacaaggtttag--accaacaaacaaactagggtttatagagaat 13878675  T
Q  400 ttctcttggcaacaacactaaggttgggattgttctgattcaccttgaacaaagcactattaggattgagtctcttg 476  Q
     ||||||||||||||| ||| ||||||||||||| |||||||||||||||||| |||||||||||||||||||||||    
T  13878676 ctctcttggcaacaactctagggttgggattgttttgattcaccttgaacaaaacactattaggattgagtctcttg 13878752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 100 - 476
Target Start/End: Complemental strand, 26887755 - 26887381
Alignment:
Q  100 gtgtgacagttaacttaaaatcagaattctggagaatcgtgccacgatggagaaacatcgcgccacgattgttgaagtaagattctgaggaagctactgg 199  Q
    |||||| ||||||||||||||||||| ||||||| ||||||||||||||||||| |||||||||||||| ||||||| |||||||   || ||  |||||    
T  26887755 gtgtgagagttaacttaaaatcagaaatctggagcatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggcagacactgg 26887656  T
Q  200 aaatttcgtgccacgatgaagccgcatcgtgccacgatggcatcgctgaagataaaaataaaacgtatttt-cagcatagatttgtttcagttttttaag 298  Q
    ||||||||||||||||||||||| ||||| ||||||||||   |||||||||||||||||||||||||||| |||  |||||||||||||||||| ||||    
T  26887655 aaatttcgtgccacgatgaagcctcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtatttttcagt-tagatttgtttcagttttataag 26887557  T
Q  299 ggtttactttccactataaatataagccttatatcagatgataaa-gtgtgtagaaaaacagggtttagaaaccaacatacaaactagggtttatagaga 397  Q
    |||||||||||||||||||||| | ||||| |||||||||||||| | ||||||||||||| ||||||||  |||||| |||||||||||||||||||||    
T  26887556 ggtttactttccactataaataca-gccttgtatcagatgataaaagcgtgtagaaaaacaaggtttaga--ccaacaaacaaactagggtttatagaga 26887460  T
Q  398 atttctcttggcaacaacactaaggttgggattgttctgattcaccttgaacaaagcactattaggattgagtctcttg 476  Q
    || ||||||||||||||| ||| ||||||||||||| |||||||||||||||||| |||||||||||||||||||||||    
T  26887459 atctctcttggcaacaactctagggttgggattgttttgattcaccttgaacaaaacactattaggattgagtctcttg 26887381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 114 - 476
Target Start/End: Original strand, 25941330 - 25941669
Alignment:
Q  114 ttaaaatcagaattctggagaatcgtgccacgatggagaaacatcgcgccacgattgttgaagtaagattctgaggaagctactggaaatttcgtgccac 213  Q
    |||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||   ||||||||||||||||||||          
T  25941330 ttaaaatcagaaatctggagaatcgtgccacgatggagaagcatcgcgccacgattgttgaagcaagattcctgggaagctactggaaatttcg------ 25941423  T
Q  214 gatgaagccgcatcgtgccacgatggcatcgctgaagataaaaataaaacgtattttcagcatagatttgtttcagttttttaagggtttactttccact 313  Q
                   |||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||    
T  25941424 ---------------tgccacgatggcatcgctgaagataaaaataaaacgtattttcagt-tagatttgtttcagttttttaagggtttactttccact 25941507  T
Q  314 ataaatataagccttatatcagatgataaagtgtgtagaaaaacagggtttagaaaccaacatacaaactagggtttatagagaatttctcttggcaaca 413  Q
    ||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||| |||||||||||||||||||| ||||    
T  25941508 ataaatataagccttgtatcagatgataaagtgtgtagaaaaacatggtttagaaaccaacattcaaactaggg-ttatagagaatttctcttggtaaca 25941606  T
Q  414 acactaaggttgggattgttctgattcaccttgaacaaagcactattaggattgagtctcttg 476  Q
    || ||| ||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||    
T  25941607 actctagggttgggattgttttgattcaccttgaacaaagcattattaggattgagtctcttg 25941669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 198; E-Value: 1e-107
Query Start/End: Original strand, 101 - 476
Target Start/End: Original strand, 16785572 - 16785944
Alignment:
Q  101 tgtgacagttaacttaaaatcagaattctggagaatcgtgccacgatggagaaacatcgcgccacgattgttgaagtaagattctgaggaagctactgga 200  Q
    ||||| ||||||||||||||||||| ||||||| ||||||||||||| || || |||||||||||||| ||||||| |||||||   |||||  ||||||    
T  16785572 tgtgagagttaacttaaaatcagaaatctggagcatcgtgccacgatcgaaaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 16785671  T
Q  201 aatttcgtgccacgatgaagccgcatcgtgccacgatggcatcgctgaagataaaaataaaacgtattttcagcatagatttgtttcagttttttaaggg 300  Q
    ||  | ||||||||||||||| |  ||||||||||||||   | |||||||||||||||||| |||||||||   |||||||||||||||||||||||||    
T  16785672 aaaattgtgccacgatgaagcagggtcgtgccacgatggtcgcactgaagataaaaataaaatgtattttcatt-tagatttgtttcagttttttaaggg 16785770  T
Q  301 tttactttccactataaatataagccttatatcagatgataaa-gtgtgtagaaaaacagggtttagaaaccaacatacaaactagggtttatagagaat 399  Q
    |||||||||||||||||||| | ||||| || ||||||||||| ||||||||||||||| ||||||||  |||||| |||||||||||||||||||||||    
T  16785771 tttactttccactataaataca-gccttgtagcagatgataaaagtgtgtagaaaaacaaggtttaga--ccaacaaacaaactagggtttatagagaat 16785867  T
Q  400 ttctcttggcaacaacactaaggttgggattgttctgattcaccttgaacaaagcactattaggattgagtctcttg 476  Q
     ||||||||||||||| ||| ||||||||||||| |||||||||||||||||| |||||||||||||||||||||||    
T  16785868 ctctcttggcaacaactctagggttgggattgttttgattcaccttgaacaaaacactattaggattgagtctcttg 16785944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 183; E-Value: 9e-99
Query Start/End: Original strand, 101 - 476
Target Start/End: Complemental strand, 22352386 - 22352009
Alignment:
Q  101 tgtgacagttaacttaaaatcagaattctggagaatcgtgccacgatggagaaacatcgcgccacgattgttgaagtaagattctgaggaagctactgga 200  Q
    ||||| |||||||||||||||  |||||| ||||||||||| || |||||||| | ||| |||||||||||||||  || ||||||  | |   ||||||    
T  22352386 tgtgagagttaacttaaaatctaaattctagagaatcgtgctacaatggagaagcttcgtgccacgattgttgaatcaaaattctggagcattcactgga 22352287  T
Q  201 aatttcgtgccacgatgaagccgcatcgtgccacgatggcatcgctgaagataaaaataaaacgtattttcagcatagatttgtttcagtttttt--aag 298  Q
    ||  | ||||||||||     || |||||||||||||||      |||||||||||| |||||||||||| |    |||||||||||||||||||  |||    
T  22352286 aaaattgtgccacgattggatcgaatcgtgccacgatggtgcgattgaagataaaaacaaaacgtatttttattgaagatttgtttcagttttttttaag 22352187  T
Q  299 ggtttactttccactataaatataagccttatatcagatgataaagtgtgtagaaaaacagggtttagaaaccaacatacaaactagggtttatagagaa 398  Q
    || |||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  22352186 gggttactttccactataaatataaaccttgtatcagatgataaagtgtgtagaaaaacagggtttagaagccaacatacaaactagggtttatagagaa 22352087  T
Q  399 tttctcttggcaacaacactaaggttgggattgttctgattcaccttgaacaaagcactattaggattgagtctcttg 476  Q
    ||||||||||||||||||||| ||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||    
T  22352086 tttctcttggcaacaacactagggttgggattgttttgaatcaccttgaacaaagcactattaggattgagtctcttg 22352009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 107 - 476
Target Start/End: Complemental strand, 22343329 - 22342958
Alignment:
Q  107 agttaacttaaaatcagaattctggagaatcgtgccacgatggagaaacatcgcgccacgattgttgaagtaagattctgaggaagctactggaaatttc 206  Q
    |||||||||||||||||||||||||||||||  |||||||||||||| | ||| |||||||||||||||| || | ||||  | |   | ||||||  ||    
T  22343329 agttaacttaaaatcagaattctggagaatcaagccacgatggagaagcttcgtgccacgattgttgaagcaaaactctggagcattcattggaaaaatc 22343230  T
Q  207 gtgccacgatgaagccgcatcgtgccacgatggcatcgctgaagataaaaataaaacgtattttcagcatagatttgtttcagtttttt--aagggttta 304  Q
    ||||||||||     |  ||||| |||||||||      |||||||||||| |||||||||||| |    |||||||||||||||||||  ||||| |||    
T  22343229 gtgccacgattggatcaaatcgtaccacgatggtgcgattgaagataaaaacaaaacgtatttttattgaagatttgtttcagttttttttaaggggtta 22343130  T
Q  305 ctttccactataaatataagccttatatcagatgataaagtgtgtagaaaaacagggtttagaaaccaacatacaaactagggtttatagagaatttctc 404  Q
    |||||| ||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||    
T  22343129 ctttcccctataaatataagccttgtatcatatgataaagtgtgtagaaaaacagggtttagaagccaacatacaaactagggtttatagagaatctctc 22343030  T
Q  405 ttggcaacaacactaaggttgggattgttctgattcaccttgaacaaagcactattaggattgagtctcttg 476  Q
    ||||||||||||||| ||||| ||||||| ||||||| ||||||||||||||||||||||||| ||||||||    
T  22343029 ttggcaacaacactagggttgagattgttttgattcaacttgaacaaagcactattaggattgcgtctcttg 22342958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 156 - 476
Target Start/End: Original strand, 33215533 - 33215852
Alignment:
Q  156 atcgcgccacgattgttgaagtaagattctgaggaagctactggaaatttcgtgccacgatgaagccgcatcgtgccacgatggcatcgctgaagataaa 255  Q
    |||| |||||||||||||||| |||||||||| | ||  ||||||||  |||||||||||||||  |||| |||| |||||||| | |  ||| ||||||    
T  33215533 atcgtgccacgattgttgaagaaagattctgaagcagtcactggaaaaatcgtgccacgatgaaatcgcaacgtggcacgatggtaccattgaggataaa 33215632  T
Q  256 aataaaacgtattttcagcatagatttgtttcagttttttaagggtttactttccactataaatataagccttatatcagatgataaagtgtgtagaaaa 355  Q
    |   ||||||||||||||   ||||||||| || ||||| ||||| |||||||| |||||||||||||||||| | ||||||||||||||||||||||||    
T  33215633 acagaaacgtattttcagtgaagatttgttccaatttttaaaggggttactttc-actataaatataagccttgtgtcagatgataaagtgtgtagaaaa 33215731  T
Q  356 acagggtttagaaaccaacatacaaactagggtttatagagaatttctcttggcaacaacactaaggttgggattgttctgattcaccttgaacaaagca 455  Q
    |||| |||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||| ||||| ||||||| |||||||||||||| ||||||    
T  33215732 acagagtttagaagccaacatacaaactagggtttatagagaatttctctttgcaacaacactagggttgtgattgttttgattcaccttgaataaagca 33215831  T
Q  456 ctattaggattgagtctcttg 476  Q
    |||||||||||||||||||||    
T  33215832 ctattaggattgagtctcttg 33215852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 160; E-Value: 5e-85
Query Start/End: Original strand, 101 - 367
Target Start/End: Complemental strand, 30975228 - 30974963
Alignment:
Q  101 tgtgacagttaacttaaaatcagaattctggagaatcgtgccacgatggagaaacatcgcgccacgattgttgaagtaagattctgaggaagctactgga 200  Q
    ||||| ||||||||||||||||||| ||||||| ||||||||||||||||||| |||||||||||||| ||||||| |||||||   |||||  | ||||    
T  30975228 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattccttggaagacattgga 30975129  T
Q  201 aatttcgtgccacgatgaagccgcatcgtgccacgatggcatcgctgaagataaaaataaaacgtattttcagcatagatttgtttcagttttttaaggg 300  Q
    |||||||||||||||||||||| ||||| ||||||||||   |||||||||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  30975128 aatttcgtgccacgatgaagcctcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcag-ttagatttgtttcagttttttaaggg 30975030  T
Q  301 tttactttccactataaatataagccttatatcagatgat-aaagtgtgtagaaaaacagggtttaga 367  Q
    ||||||||||||||||||||  |||||| ||||||||||| |||||||||||||||||| ||||||||    
T  30975029 tttactttccactataaata-cagccttgtatcagatgataaaagtgtgtagaaaaacaaggtttaga 30974963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 160; E-Value: 5e-85
Query Start/End: Original strand, 101 - 367
Target Start/End: Complemental strand, 30981667 - 30981402
Alignment:
Q  101 tgtgacagttaacttaaaatcagaattctggagaatcgtgccacgatggagaaacatcgcgccacgattgttgaagtaagattctgaggaagctactgga 200  Q
    ||||| ||||||||||||||||||| ||||||| ||||||||||||||||||| |||||||||||||| ||||||| |||||||   |||||  | ||||    
T  30981667 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattccttggaagacattgga 30981568  T
Q  201 aatttcgtgccacgatgaagccgcatcgtgccacgatggcatcgctgaagataaaaataaaacgtattttcagcatagatttgtttcagttttttaaggg 300  Q
    |||||||||||||||||||||| ||||| ||||||||||   |||||||||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  30981567 aatttcgtgccacgatgaagcctcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcag-ttagatttgtttcagttttttaaggg 30981469  T
Q  301 tttactttccactataaatataagccttatatcagatgat-aaagtgtgtagaaaaacagggtttaga 367  Q
    ||||||||||||||||||||  |||||| ||||||||||| |||||||||||||||||| ||||||||    
T  30981468 tttactttccactataaata-cagccttgtatcagatgataaaagtgtgtagaaaaacaaggtttaga 30981402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 160; E-Value: 5e-85
Query Start/End: Original strand, 101 - 367
Target Start/End: Complemental strand, 30987831 - 30987566
Alignment:
Q  101 tgtgacagttaacttaaaatcagaattctggagaatcgtgccacgatggagaaacatcgcgccacgattgttgaagtaagattctgaggaagctactgga 200  Q
    ||||| ||||||||||||||||||| ||||||| ||||||||||||||||||| |||||||||||||| ||||||| |||||||   |||||  | ||||    
T  30987831 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattccttggaagacattgga 30987732  T
Q  201 aatttcgtgccacgatgaagccgcatcgtgccacgatggcatcgctgaagataaaaataaaacgtattttcagcatagatttgtttcagttttttaaggg 300  Q
    |||||||||||||||||||||| ||||| ||||||||||   |||||||||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  30987731 aatttcgtgccacgatgaagcctcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcag-ttagatttgtttcagttttttaaggg 30987633  T
Q  301 tttactttccactataaatataagccttatatcagatgat-aaagtgtgtagaaaaacagggtttaga 367  Q
    ||||||||||||||||||||  |||||| ||||||||||| |||||||||||||||||| ||||||||    
T  30987632 tttactttccactataaata-cagccttgtatcagatgataaaagtgtgtagaaaaacaaggtttaga 30987566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 101 - 393
Target Start/End: Complemental strand, 35209090 - 35208801
Alignment:
Q  101 tgtgacagttaacttaaaatcagaattctggagaatcgtgccacgatggagaaacatcgcgccacgattgttgaagtaagattctgaggaagctactgga 200  Q
    ||||| ||||||||||||||||||| ||||||| |||||||||| |||||||| |||||||||||||| ||||||| |||||||   |||||  ||||||    
T  35209090 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacaatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 35208991  T
Q  201 aatttcgtgccacgatgaagccgcatcgtgccacgatggcatcgctgaagataaaaataaaacgtattttcagcatagatttgtttcagttttttaaggg 300  Q
      |||||||||||||||||||| || || ||||||||||   |||||||||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  35208990 tttttcgtgccacgatgaagcctcaacgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcag-ttagatttgtttcagttttttaaggg 35208892  T
Q  301 tttactttccactataaatataagccttatatcagatgat-aaagtgtgtagaaaaacagggtttagaaaccaacatacaaactagggtttata 393  Q
    ||||||||||||||||||||  |||||| ||||||||||| |||||||||||||||||| |||||||  ||||||| |||||||||||||||||    
T  35208891 tttactttccactataaata-cagccttgtatcagatgataaaagtgtgtagaaaaacaaggtttag--accaacaaacaaactagggtttata 35208801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 292 - 476
Target Start/End: Complemental strand, 13467803 - 13467620
Alignment:
Q  292 ttttaagggtttactttccactataaatataagccttatatcagatgataaagtgtgtagaaaaacagggtttagaaaccaacatacaaactagggttta 391  Q
    ||||||||||| ||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  13467803 ttttaagggtt-actttccactataaatataagccttgtatcaaatgataaagtgtgtagaaaaacagggtttagaagccaacatacaaactagggttta 13467705  T
Q  392 tagagaatttctcttggcaacaacactaaggttgggattgttctgattcaccttgaacaaagcactattaggattgagtctcttg 476  Q
    |||||||||| |||| |||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  13467704 tagagaatttatctttgcaacaacactagggttgggattgttttgattcaccttgaacaaagcactattaggattgagtctcttg 13467620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 99 - 476
Target Start/End: Original strand, 26642827 - 26643201
Alignment:
Q  99 tgtgtgacagttaacttaaaatcagaattctggagaatcgtgccacgatggagaaacatcgcgccacgattgttgaagtaagattctgaggaagctactg 198  Q
    ||||||| ||||||||||||||||| | ||||||||| |||||||||||||||||  | || || ||||||||||||  |||||||||| | ||  ||||    
T  26642827 tgtgtgagagttaacttaaaatcaggaatctggagaaacgtgccacgatggagaaggaacgtgcaacgattgttgaaacaagattctgaagcagtcactg 26642926  T
Q  199 gaaatttcgtgccacgatgaagccgcatcgtgccacgatggcatcgctgaagataaaaata-aaacgtattttcagcatagatttgtttcagttttttaa 297  Q
    |||| ||||||| |||||| |  || | |||| |||||||| | || |||||  || || | ||||||||||||||   |||||| || || | ||||||    
T  26642927 gaaacttcgtgcaacgatggaatcgtaacgtggcacgatggta-cgttgaaggaaataacagaaacgtattttcagggaagatttattcca-tattttaa 26643024  T
Q  298 gggtttactttccactataaatataagccttatatcagatgataaagtgtgtagaaaaacagggtttagaaaccaacatacaaactagggtttatagaga 397  Q
    ||||| ||||||||||||||||||||| ||| |||||||||| |||  |  ||||||| || ||||||||| ||||||||||||||||||||||||||||    
T  26643025 gggtt-actttccactataaatataagtcttgtatcagatgagaaacagaatagaaaa-caaggtttagaagccaacatacaaactagggtttatagaga 26643122  T
Q  398 atttctcttggcaacaacactaaggttgggattgttctgattcaccttgaacaaagcactattaggattgagtctcttg 476  Q
    |||||||||| | ||||||||| ||||||||||||| |||||||||| ||||||| |||||||||||||||||||||||    
T  26643123 atttctcttgcccacaacactagggttgggattgttttgattcacctcgaacaaatcactattaggattgagtctcttg 26643201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 99 - 476
Target Start/End: Original strand, 26748793 - 26749167
Alignment:
Q  99 tgtgtgacagttaacttaaaatcagaattctggagaatcgtgccacgatggagaaacatcgcgccacgattgttgaagtaagattctgaggaagctactg 198  Q
    ||||||| ||||||||||||||||| | ||||||||| |||||||||||||||||  | || || ||||||||||||  |||||||||| | ||  ||||    
T  26748793 tgtgtgagagttaacttaaaatcaggaatctggagaaacgtgccacgatggagaaggaacgtgcaacgattgttgaaacaagattctgaagcagtcactg 26748892  T
Q  199 gaaatttcgtgccacgatgaagccgcatcgtgccacgatggcatcgctgaagataaaaata-aaacgtattttcagcatagatttgtttcagttttttaa 297  Q
    |||| ||||||| |||||| |  || | |||| |||||||| | || |||||  || || | ||||||||||||||   |||||| || || | ||||||    
T  26748893 gaaacttcgtgcaacgatggaatcgtaacgtggcacgatggta-cgttgaaggaaataacagaaacgtattttcagggaagatttattcca-tattttaa 26748990  T
Q  298 gggtttactttccactataaatataagccttatatcagatgataaagtgtgtagaaaaacagggtttagaaaccaacatacaaactagggtttatagaga 397  Q
    ||||| ||||||||||||||||||||| ||| |||||||||| |||  |  ||||||| || ||||||||| ||||||||||||||||||||||||||||    
T  26748991 gggtt-actttccactataaatataagtcttgtatcagatgagaaacagaatagaaaa-caaggtttagaagccaacatacaaactagggtttatagaga 26749088  T
Q  398 atttctcttggcaacaacactaaggttgggattgttctgattcaccttgaacaaagcactattaggattgagtctcttg 476  Q
    |||||||||| | ||||||||| ||||||||||||| |||||||||| ||||||| |||||||||||||||||||||||    
T  26749089 atttctcttgcccacaacactagggttgggattgttttgattcacctcgaacaaatcactattaggattgagtctcttg 26749167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 330 - 476
Target Start/End: Complemental strand, 3577817 - 3577671
Alignment:
Q  330 tatcagatgataaagtgtgtagaaaaacagggtttagaaaccaacatacaaactagggtttatagagaatttctcttggcaacaacactaaggttgggat 429  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||    
T  3577817 tatcagatgataaagtgtgtagaaaaacagggtttaaaaaccaacatacaaactagggtttatagagaatttctctttgcaacaacactagggttgggat 3577718  T
Q  430 tgttctgattcaccttgaacaaagcactattaggattgagtctcttg 476  Q
    |||| |||||||||||||||||| |||||||||||||||||||||||    
T  3577717 tgttttgattcaccttgaacaaaacactattaggattgagtctcttg 3577671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 370 - 476
Target Start/End: Original strand, 17035974 - 17036080
Alignment:
Q  370 ccaacatacaaactagggtttatagagaatttctcttggcaacaacactaaggttgggattgttctgattcaccttgaacaaagcactattaggattgag 469  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||    
T  17035974 ccaacatacaaactagggtttatagagaatttctcttggcaacaacactagggttgggattgttttgattcaccttgaacaaagcactattaggattgag 17036073  T
Q  470 tctcttg 476  Q
    |||||||    
T  17036074 tctcttg 17036080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 353 - 476
Target Start/End: Complemental strand, 19702143 - 19702019
Alignment:
Q  353 aaaacagggtttagaaaccaacatacaaactagggtttatagagaatttctcttggcaacaa-cactaaggttgggattgttctgattcaccttgaacaa 451  Q
    |||||| ||||||||| |||||||||||||||| |||||||||||||||||||||||||||| ||||| ||||||||||||| |||||||||||||||||    
T  19702143 aaaacaaggtttagaagccaacatacaaactagcgtttatagagaatttctcttggcaacaaacactagggttgggattgttttgattcaccttgaacaa 19702044  T
Q  452 agcactattaggattgagtctcttg 476  Q
    |||||||||||||||||||||||||    
T  19702043 agcactattaggattgagtctcttg 19702019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 101 - 322
Target Start/End: Original strand, 26084725 - 26084945
Alignment:
Q  101 tgtgacagttaacttaaaatcagaattctggagaatcgtgccacgatggagaaacatcgcgccacgattgttgaagtaagattct-gaggaagctactgg 199  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||| | ||| |||||||||||||||| || ||||| ||| || | |||||    
T  26084725 tgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatggagaagcttcgtgccacgattgttgaagcaaaattctggagcaatc-actgg 26084823  T
Q  200 aaatttcgtgccacgatgaagccgcatcgtgccacgatggcatcgctgaagataaaaataaaacgtattttcagcatagatttgtttcagttttttaagg 299  Q
    |||  ||||||||||||  |  ||||||||| ||||||||      ||||||||||||||||||||||||| |    |||||||||||||||||||||||    
T  26084824 aaaaatcgtgccacgattgaatcgcatcgtggcacgatggtgcgattgaagataaaaataaaacgtatttttattgaagatttgtttcagttttttaagg 26084923  T
Q  300 gtttactttccactataaatata 322  Q
    | ||||||| |||||||||||||    
T  26084924 gattacttt-cactataaatata 26084945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 306 - 476
Target Start/End: Complemental strand, 5166141 - 5165972
Alignment:
Q  306 tttccactataaatataagccttatatcagatgataaagtgtgtagaaaaacagggtttagaaaccaacatacaaactagggtttatagagaatttctct 405  Q
    ||||||||||||||||||| ||| ||||||||||| | |||||||||||| |||||||||||| ||||||||||| |||||||||||||||||||||||     
T  5166141 tttccactataaatataagtcttgtatcagatgattatgtgtgtagaaaa-cagggtttagaagccaacatacaagctagggtttatagagaatttctca 5166043  T
Q  406 tggcaacaacactaaggttgggattgttctgattcaccttgaacaaagcact-attaggattgagtctcttg 476  Q
     ||||| || |||| |||||||| |||| |||||||| ||||||||| ||||  ||||||||||||||||||    
T  5166042 aggcaagaatactagggttggga-tgttttgattcactttgaacaaaacactgtttaggattgagtctcttg 5165972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 383 - 476
Target Start/End: Complemental strand, 12166397 - 12166303
Alignment:
Q  383 tagggtttatagagaatttctcttggcaacaa-cactaaggttgggattgttctgattcaccttgaacaaagcactattaggattgagtctcttg 476  Q
    |||||||||||||||||||||||||||||||| ||||| ||||||||||||| |||||||| ||||||||||||| |||||||||||||||||||    
T  12166397 tagggtttatagagaatttctcttggcaacaaacactagggttgggattgttttgattcacgttgaacaaagcaccattaggattgagtctcttg 12166303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 101 - 322
Target Start/End: Original strand, 26064756 - 26064976
Alignment:
Q  101 tgtgacagttaacttaaaatcagaattctggagaatcgtgccacgatggagaaacatcgcgccacgattgttgaagtaagattct-gaggaagctactgg 199  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||| | ||| |||||||||||||||| || ||||| ||| || | |||      
T  26064756 tgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatggagaagcttcgtgccacgattgttgaagcaaaattctggagcaatc-acttt 26064854  T
Q  200 aaatttcgtgccacgatgaagccgcatcgtgccacgatggcatcgctgaagataaaaataaaacgtattttcagcatagatttgtttcagttttttaagg 299  Q
    ||| |||||| ||||||     || ||||||  |||||||      ||||||||||||||||||||||||| |    |||||||||||||||||||||||    
T  26064855 aaaattcgtgtcacgattgtatcgtatcgtgttacgatggtgcgattgaagataaaaataaaacgtatttttattgaagatttgtttcagttttttaagg 26064954  T
Q  300 gtttactttccactataaatata 322  Q
    | ||||||| |||||||||||||    
T  26064955 gattacttt-cactataaatata 26064976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 101 - 336
Target Start/End: Complemental strand, 28241860 - 28241626
Alignment:
Q  101 tgtgacagttaacttaaaatcagaattctggagaatcgtgccacgatggagaaacatcgcgccacgattgttgaagtaagattctgaggaagctactgga 200  Q
    ||||| |||||||||||||||||||||||| |||||||||||||||||||||| | ||| ||||||||||||| || ||  ||||| | || | ||||||    
T  28241860 tgtgagagttaacttaaaatcagaattctgaagaatcgtgccacgatggagaagcttcgtgccacgattgttggagcaaagttctgggcaaac-actgga 28241762  T
Q  201 aatttcgtgccacgatgaagccgcatcgtgccacgatggcatcgctgaagataaaaataaaacgtattttcagcatagatttgtttcag-ttttttaagg 299  Q
    ||  ||||||||||||     || ||||||||||||| |      ||||||||||||||||||||||||| |    | ||||||||||| ||||||||||    
T  28241761 aaaatcgtgccacgattgtatcgaatcgtgccacgatagtgcgattgaagataaaaataaaacgtatttttattgaaaatttgtttcagtttttttaagg 28241662  T
Q  300 gtttactttccactataaatataagccttatatcaga 336  Q
    | ||||||| |||||||||||||  |||| |||||||    
T  28241661 gattacttt-cactataaatatagaccttgtatcaga 28241626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 101 - 185
Target Start/End: Complemental strand, 1230767 - 1230683
Alignment:
Q  101 tgtgacagttaacttaaaatcagaattctggagaatcgtgccacgatggagaaacatcgcgccacgattgttgaagtaagattct 185  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||| | ||| |||||||||||||||| || |||||    
T  1230767 tgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatggagaagcttcgtgccacgattgttgaagcaaaattct 1230683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 350 - 473
Target Start/End: Complemental strand, 24542956 - 24542834
Alignment:
Q  350 agaaaaacagggtttagaaaccaacatacaaactagggtttatagagaatttctcttggcaacaa-cactaaggttgggattgttctgattcaccttgaa 448  Q
    ||||||| | ||||||||| ||||||  ||||||| |||||||||||| |||||||||||||||| ||||| ||||||||||||| ||||||||||||||    
T  24542956 agaaaaataaggtttagaagccaacac-caaactatggtttatagaga-tttctcttggcaacaaacactagggttgggattgttttgattcaccttgaa 24542859  T
Q  449 caaagcactattaggattgagtctc 473  Q
     ||| |||| ||||||| |||||||    
T  24542858 taaaacacttttaggatagagtctc 24542834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 246 - 322
Target Start/End: Complemental strand, 1230643 - 1230568
Alignment:
Q  246 tgaagataaaaataaaacgtattttcagcatagatttgtttcagttttttaagggtttactttccactataaatata 322  Q
    ||||||||||||||||||||||||| |    |||||||||||||||||||||||| ||||||| |||||||||||||    
T  1230643 tgaagataaaaataaaacgtatttttattgaagatttgtttcagttttttaagggattacttt-cactataaatata 1230568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 101 - 147
Target Start/End: Original strand, 33215499 - 33215545
Alignment:
Q  101 tgtgacagttaacttaaaatcagaattctggagaatcgtgccacgat 147  Q
    ||||| ||||||||||||||||||| |||||||||||||||||||||    
T  33215499 tgtgagagttaacttaaaatcagaaatctggagaatcgtgccacgat 33215545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 348 - 476
Target Start/End: Original strand, 7293834 - 7293960
Alignment:
Q  348 gtagaaaaacagggtttagaaaccaacatacaaactagggtttatagagaatttctcttggcaa-caacactaaggttgggattgttctgattcaccttg 446  Q
    ||||||||| |||||||| || | |||| ||||||||||||| |||||| ||||||||||| ||  ||||||| |||||| |||||| |   ||||||||    
T  7293834 gtagaaaaatagggtttaaaagcaaaca-acaaactagggttcatagag-atttctcttggtaagaaacactagggttggtattgttttcgctcaccttg 7293931  T
Q  447 aacaaagcactattaggattgagtctcttg 476  Q
    |||||| |||||||| ||| ||||||||||    
T  7293932 aacaaa-cactattaagatagagtctcttg 7293960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 101 - 182
Target Start/End: Complemental strand, 13468036 - 13467955
Alignment:
Q  101 tgtgacagttaacttaaaatcagaattctggagaatcgtgccacgatggagaaacatcgcgccacgattgttgaagtaagat 182  Q
    ||||| ||||||||||||||||| | | ||||||| | | ||||||||||||| || || |||||||||||||||| |||||    
T  13468036 tgtgagagttaacttaaaatcaggaatttggagaaacataccacgatggagaagcaacgtgccacgattgttgaagcaagat 13467955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 101 - 149
Target Start/End: Complemental strand, 14507716 - 14507668
Alignment:
Q  101 tgtgacagttaacttaaaatcagaattctggagaatcgtgccacgatgg 149  Q
    ||||| |||||||||||||||||| ||||| ||||||||| ||||||||    
T  14507716 tgtgagagttaacttaaaatcagatttctgcagaatcgtggcacgatgg 14507668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 358 - 431
Target Start/End: Complemental strand, 17904632 - 17904559
Alignment:
Q  358 agggtttagaaaccaacatacaaactagggtttatagagaatttctcttggcaacaa-cactaaggttgggattg 431  Q
    ||||||||||| ||||||   |||||||||||| |||||  |||||||| ||||||| |||||||||||||||||    
T  17904632 agggtttagaagccaacaacaaaactagggtttgtagagt-tttctctttgcaacaaacactaaggttgggattg 17904559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 418 - 475
Target Start/End: Complemental strand, 12911662 - 12911605
Alignment:
Q  418 taaggttgggattgttctgattcaccttgaacaaagcactattaggattgagtctctt 475  Q
    ||||||||| |||||| || ||| ||||||| ||| |||||||| |||||||||||||    
T  12911662 taaggttggtattgttttgcttccccttgaataaaacactattaagattgagtctctt 12911605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 101 - 176
Target Start/End: Complemental strand, 15533220 - 15533145
Alignment:
Q  101 tgtgacagttaacttaaaatcagaattctggag-aatcgtgccacgatggagaaacatcgcgccacgattgttgaag 176  Q
    ||||| ||||||||||||||||| | |||  || |||||||||||||||||||| || || |||||||| |||||||    
T  15533220 tgtgagagttaacttaaaatcagga-tctacagaaatcgtgccacgatggagaagcaacgtgccacgatggttgaag 15533145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 360 - 431
Target Start/End: Original strand, 30445562 - 30445633
Alignment:
Q  360 ggtttagaaaccaacatacaaactagggtttatagagaatttctcttggcaac-aacactaaggttgggattg 431  Q
    ||||||||| |||||||  |||||||||||| |||| || ||||||||||||| ||||||| ||||| |||||    
T  30445562 ggtttagaagccaacattaaaactagggtttgtagataa-ttctcttggcaacaaacactacggttgagattg 30445633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 293; Significance: 1e-164; HSPs: 44)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 293; E-Value: 1e-164
Query Start/End: Original strand, 101 - 476
Target Start/End: Original strand, 18586616 - 18586991
Alignment:
Q  101 tgtgacagttaacttaaaatcagaattctggagaatcgtgccacgatggagaaacatcgcgccacgattgttgaagtaagattctgaggaagctactgga 200  Q
    ||||| ||||||||||||||||||| ||||||||||||||||||||||||||| |||||| ||||||||||||||| |||||||||||||||||||||||    
T  18586616 tgtgagagttaacttaaaatcagaaatctggagaatcgtgccacgatggagaagcatcgcaccacgattgttgaagcaagattctgaggaagctactgga 18586715  T
Q  201 aatttcgtgccacgatgaagccgcatcgtgccacgatggcatcgctgaagataaaaataaaacgtatttt-cagcatagatttgtttcagttttttaagg 299  Q
    ||  | ||||||||||||||||||||||||||| |||||   |||||||||||||||||||||||||||| |||  ||||||||||||||||||||||||    
T  18586716 aaaattgtgccacgatgaagccgcatcgtgccatgatggtcgcgctgaagataaaaataaaacgtatttttcagt-tagatttgtttcagttttttaagg 18586814  T
Q  300 gtttactttccactataaatataagccttatatcagatgataaagtgtgtagaaaaacagggtttagaaaccaacatacaaactagggtttatagagaat 399  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  18586815 gtttactttccactataaatataagccttgtatcagatgataaagtgtgtagaaaaatagggtttagaaaccaacatacaaactagggtttatagagaat 18586914  T
Q  400 ttctcttggcaacaacactaaggttgggattgttctgattcaccttgaacaaagcactattaggattgagtctcttg 476  Q
    |||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  18586915 ttctcttggcaacaacactagggttgggattgttttgattcaccttgaacaaagcactattaggattgagtctcttg 18586991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 292; E-Value: 1e-164
Query Start/End: Original strand, 101 - 476
Target Start/End: Original strand, 31300074 - 31300449
Alignment:
Q  101 tgtgacagttaacttaaaatcagaattctggagaatcgtgccacgatggagaaacatcgcgccacgattgttgaagtaagattctgaggaagctactgga 200  Q
    ||||| ||||||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||||||||||||| |||||||||||||||||||||||    
T  31300074 tgtgagagttaacttaaaatcagaaatctggagaatcgtgccacgatggagaagcatcacgccacgattgttgaagcaagattctgaggaagctactgga 31300173  T
Q  201 aatttcgtgccacgatgaagccgcatcgtgccacgatggcatcgctgaagataaaaataaaacgtattttcagcatagatttgtttcagttttttaaggg 300  Q
    ||||||||||||||||||| ||| | |||| ||||||||||| ||||||||||||||||||||||||||||||   ||||||||||||||||||||||||    
T  31300174 aatttcgtgccacgatgaatccgtaacgtggcacgatggcattgctgaagataaaaataaaacgtattttcagtgaagatttgtttcagttttttaaggg 31300273  T
Q  301 tttactttccactataaatataagccttatatcagatgataaagtgtgtagaaaaacagggtttagaaaccaacatacaaactagggtttatagagaatt 400  Q
     |||||||||||||||||||||||| || ||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  31300274 gttactttccactataaatataagctttgtatcatatgataaagtgtgtagaaaaacagggtttagaaaccaacattcaaactagggtttatagagaatt 31300373  T
Q  401 tctcttggcaacaacactaaggttgggattgttctgattcaccttgaacaaagcactattaggattgagtctcttg 476  Q
    |||||| |||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  31300374 tctctttgcaacaacactagggttgggattgttttgattcaccttgaacaaagcactattaggattgagtctcttg 31300449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 277; E-Value: 1e-155
Query Start/End: Original strand, 100 - 476
Target Start/End: Original strand, 16489000 - 16489374
Alignment:
Q  100 gtgtgacagttaacttaaaatcagaattctggagaatcgtgccacgatggagaaacatcgcgccacgattgttgaagtaagattctgaggaagctactgg 199  Q
    |||||| ||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||| |||||||||    
T  16489000 gtgtgagagttaacttaaaatcagaaatctggagaatcgtgccacgatggagaagcatcgcgccacgattgttgaagcaagattctgagggagctactgg 16489099  T
Q  200 aaatttcgtgccacgatgaagccgcatcgtgccacgatggcatcgctgaagataaaaataaaacgtattttcagcatagatttgtttcagttttttaagg 299  Q
    || |||||||||| ||||||||||||||||||||||||||    ||||||||||    ||||||||||||||||  |||||||||||||||||||||||     
T  16489100 aattttcgtgccatgatgaagccgcatcgtgccacgatggacgtgctgaagatatttttaaaacgtattttcagt-tagatttgtttcagttttttaaga 16489198  T
Q  300 gtttactttccactataaatataagccttatatcagatgataaagtgtgtagaaaaacagggtttagaaaccaacatacaaactagggtttatagagaat 399  Q
    |||||||||||||||| |||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  16489199 gtttactttccactatgaatataagccttgtatcagatgataaagtgtgtagaaaa-cagggtttagaaaccaacatacaaactagggtttatagagaat 16489297  T
Q  400 ttctcttggcaacaacactaaggttgggattgttctgattcaccttgaacaaagcactattaggattgagtctcttg 476  Q
    |||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  16489298 ttctcttggcaacaacactaaggttgagattgttttgattcaccttgaacaaagcactattaggattgagtctcttg 16489374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 262; E-Value: 1e-146
Query Start/End: Original strand, 99 - 476
Target Start/End: Original strand, 8528916 - 8529292
Alignment:
Q  99 tgtgtgacagttaacttaaaatcagaattctggagaatcgtgccacgatggagaaacatcgcgccacgattgttgaagtaagattctgaggaagctactg 198  Q
    ||||||| |||||||||||||||||| ||||||||||||||| |||||||||||| |||||||||||||||||||||| |||||||||||||||||||||    
T  8528916 tgtgtgagagttaacttaaaatcagatttctggagaatcgtgtcacgatggagaagcatcgcgccacgattgttgaagcaagattctgaggaagctactg 8529015  T
Q  199 gaaatttcgtgccacgatgaagccgcatcgtgccacgatggcatcgctgaagataaaaataaaacgtattttcagcatagatttgtttcagttttttaag 298  Q
    ||||  |||||||||||||||||||||||||||||||||||      ||||||||    |||||| |||||||||  |||||||||||||||||||||||    
T  8529016 gaaaaatcgtgccacgatgaagccgcatcgtgccacgatggtgcgattgaagatatttttaaaacatattttcagt-tagatttgtttcagttttttaag 8529114  T
Q  299 ggtttactttccactataaatataagccttatatcagatgataaagtgtgtagaaaaacagggtttagaaaccaacatacaaactagggtttatagagaa 398  Q
    ||| ||||||||||||||||||||||| || |||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  8529115 ggtatactttccactataaatataagctttgtatcagatcataaagtgtgtagaaaaatagggtttagaaaccaacatacaaactagggtttatagagaa 8529214  T
Q  399 tttctcttggcaacaacactaaggttgggattgttctgattcaccttgaacaaagcactattaggattgagtctcttg 476  Q
    ||||||||||||||| ||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  8529215 tttctcttggcaacaccactagggttgggattgttttgattcaccttgaacaaagcactattaggattgagtctcttg 8529292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 101 - 476
Target Start/End: Original strand, 11853202 - 11853574
Alignment:
Q  101 tgtgacagttaacttaaaatcagaattctggagaatcgtgccacgatggagaaacatcgcgccacgattgttgaagtaagattctgaggaagctactgga 200  Q
    ||||| ||||||||||||||||||| ||||||| ||||||||||||||||||| |||||||||||||| ||||||| |||||||   |||||  | ||||    
T  11853202 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacattgga 11853301  T
Q  201 aatttcgtgccacgatgaagccgcatcgtgccacgatggcatcgctgaagataaaaataaaacgtattttcagcatagatttgtttcagttttttaaggg 300  Q
    |||||||||||||||||||||| ||||| ||||||||||   |||||||||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  11853302 aatttcgtgccacgatgaagcctcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcagt-tagatttgtttcagttttttaaggg 11853400  T
Q  301 tttactttccactataaatataagccttatatcagatgataaa-gtgtgtagaaaaacagggtttagaaaccaacatacaaactagggtttatagagaat 399  Q
    |||||||||||||||||||| | ||||| |||||||||||||| ||||||||||||||| ||||||||  |||||| | |||||||||||||||||||||    
T  11853401 tttactttccactataaataca-gccttgtatcagatgataaaagtgtgtagaaaaacaaggtttaga--ccaacaaataaactagggtttatagagaat 11853497  T
Q  400 ttctcttggcaacaacactaaggttgggattgttctgattcaccttgaacaaagcactattaggattgagtctcttg 476  Q
     ||||||||||||||| ||| ||||| ||||||| |||||||||||||||||| |||||||||||||||||||||||    
T  11853498 ctctcttggcaacaactctagggttgagattgttttgattcaccttgaacaaaacactattaggattgagtctcttg 11853574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 107 - 476
Target Start/End: Original strand, 15830819 - 15831166
Alignment:
Q  107 agttaacttaaaatcagaattctggagaatcgtgccacgatggagaaacatcgcgccacgattgttgaagtaagattctgaggaagctactggaaatttc 206  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||||||||||||| |||||||||||| ||||||||||||||||    
T  15830819 agttaacttaaaatcagaaatctggagaatcgtgccacgatggagaagcatcacgccacgattgttgaagcaagattctgagggagctactggaaatttc 15830918  T
Q  207 gtgccacgatgaagccgcatcgtgccacgatggcatcgctgaagataaaaataaaacgtattttcagcatagatttgtttcagttttttaagggtttact 306  Q
    |                     ||||||||||||||||| |||||||    ||||||||||||||||  |||||||||||||||||||||||||||||||    
T  15830919 g---------------------tgccacgatggcatcgcagaagatatttttaaaacgtattttcagt-tagatttgtttcagttttttaagggtttact 15830996  T
Q  307 ttccactataaatataagccttatatcagatgataaagtgtgtagaaaaacagggtttagaaaccaacatacaaactagggtttatagagaatttctctt 406  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||    
T  15830997 ttccactataaatataagccttgtatcagatgataaagtgtgtagaaaaacagggtttagaaaccaacatacaaactagggtttatagaaaatttttctt 15831096  T
Q  407 ggcaacaacactaaggttgggattgttctgattcaccttgaacaaagcactattaggattgagtctcttg 476  Q
    ||||||||||||| ||||||||||||| |||||||||||||||||| |||||||||||||||||||||||    
T  15831097 ggcaacaacactagggttgggattgttttgattcaccttgaacaaatcactattaggattgagtctcttg 15831166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 101 - 476
Target Start/End: Complemental strand, 4556585 - 4556216
Alignment:
Q  101 tgtgacagttaacttaaaatcagaattctggagaatcgtgccacgatggagaaacatcgcgccacgattgttgaagtaagattctgaggaagctactgga 200  Q
    ||||| ||||||||||||||| |||  |||||||||||||||||||||||||| || |  ||||||||||||||| |||| |||||| | ||      ||    
T  4556585 tgtgagagttaacttaaaatctgaaaactggagaatcgtgccacgatggagaagcaacatgccacgattgttgaaataagtttctgaagcag------ga 4556492  T
Q  201 aatttcgtgccacgatgaagccgcatcgtgccacgatggcatcgctgaagataaaaataaaacgtattttcagcatagatttgtttcagttttttaaggg 300  Q
    ||  |||||||||||||||  |||| |||| ||||||||      ||||||||||||||||||||||||||||   ||||||||||||||||||||||||    
T  4556491 aaaatcgtgccacgatgaaatcgcaacgtggcacgatggtgcgattgaagataaaaataaaacgtattttcagtgaagatttgtttcagttttttaaggg 4556392  T
Q  301 tttactttccactataaatataagccttatatcagatgataaagtgtgtagaaaaacagggtttagaaaccaacatacaaactagggtttatagagaatt 400  Q
     ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  4556391 gttactttccactataaatataagccttgtatcagatgataaagtgtgtagaaaaacagggtttagaaaccaacttacaaactagggtttatagagaatt 4556292  T
Q  401 tctcttggcaacaacactaaggttgggattgttctgattcaccttgaacaaagcactattaggattgagtctcttg 476  Q
    ||||||||||||||||||| |||||||||||||  |||||||||||||||||||||||||||||||||||||||||    
T  4556291 tctcttggcaacaacactagggttgggattgtttcgattcaccttgaacaaagcactattaggattgagtctcttg 4556216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 208; E-Value: 1e-113
Query Start/End: Original strand, 101 - 476
Target Start/End: Original strand, 15316630 - 15316983
Alignment:
Q  101 tgtgacagttaacttaaaatcagaattctggagaatcgtgccacgatggagaaacatcgcgccacgattgttgaagtaagattctgaggaagctactgga 200  Q
    ||||| ||||||||||||||||||| ||||||||||||||||||||||||||| ||||||| |||||||||||||| |||||||||||||||||||| ||    
T  15316630 tgtgagagttaacttaaaatcagaaatctggagaatcgtgccacgatggagaagcatcgcgtcacgattgttgaagcaagattctgaggaagctactaga 15316729  T
Q  201 aatttcgtgccacgatgaagccgcatcgtgccacgatggcatcgctgaagataaaaataaaacgtattttcagcatagatttgtttcagttttttaaggg 300  Q
    |||||||                     |||||||||||   |||||||||||    ||||||||||||||||   |||||||||| |||||||||||||    
T  15316730 aatttcg---------------------tgccacgatggacgcgctgaagatatttttaaaacgtattttcagtc-agatttgtttaagttttttaaggg 15316807  T
Q  301 tttactttccactataaatataagccttatatcagatgataaagtgtgtagaaaaacagggtttagaaaccaacatacaaactagggtttatagagaatt 400  Q
    |||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15316808 tttactttccactataaatataagccttgtatcagatggtaaagtgtgtagaaaaacagggtttagaaaccaacatacaaactagggtttatagagaatt 15316907  T
Q  401 tctcttggcaacaacactaaggttgggattgttctgattcaccttgaacaaagcactattaggattgagtctcttg 476  Q
    |||||||||| |||||||| |||| |||||||| ||||| ||||||||||||||||||||||||||||||||||||    
T  15316908 tctcttggcagcaacactagggttcggattgttttgatttaccttgaacaaagcactattaggattgagtctcttg 15316983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 101 - 476
Target Start/End: Original strand, 4884531 - 4884899
Alignment:
Q  101 tgtgacagttaacttaaaatcagaattctggagaatcgtgccacgatggagaaacatcgcgccacgattgttgaagtaagattctgaggaagctactgga 200  Q
    ||||| ||||||||||||||||||| ||||||||||||||||||||||||||| || || | |||||||||||||| |||||||| | | ||  ||||||    
T  4884531 tgtgagagttaacttaaaatcagaaatctggagaatcgtgccacgatggagaagcaacgtgtcacgattgttgaagcaagattctaaagcagtcactgga 4884630  T
Q  201 aatttcgtgccacgatgaagccgcatcgtgccacgatggcatcgctgaagataaaaataaaacgtattttcagcatagatttgtttcagtttttt-aagg 299  Q
    ||  | |||||||||||||   ||| |||| ||||||        ||| |||||||| |||||||||||||||   |||||||||||| |||||| || |    
T  4884631 aaaattgtgccacgatgaaattgcaacgtggcacgat--------tgaggataaaaacaaaacgtattttcagtgaagatttgtttcaatttttttaaag 4884722  T
Q  300 gtttactttccactataaatataagccttatatcagatgataaagtgtgtagaaaaacagggtttagaaaccaacatacaaactagggtttatagagaat 399  Q
    | |||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||    
T  4884723 ggttactttccattataaatataagccttgtatcagatgataaagtgtgtagaaaaacagggtttagaagccaacatacaaattagggtttatagagaat 4884822  T
Q  400 ttctcttggcaacaacactaaggttgggattgttctgattcaccttgaacaaagcactattaggattgagtctcttg 476  Q
    ||||||| |||||||||||  || |||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  4884823 ttctctttgcaacaacactgggggtgggattgttttgattcaccttgaacaaagcactattaggattgagtctcttg 4884899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 101 - 476
Target Start/End: Complemental strand, 16689472 - 16689097
Alignment:
Q  101 tgtgacagttaacttaaaatcagaattctggagaatcgtgccacgatggagaaacatcgcgccacgattgttgaagtaagattctgaggaagctactgga 200  Q
    ||||| ||||||||||||||| |||  |||||||||||||||||||||||||| | |||  || |||||||||||| ||| || ||| | ||  ||||||    
T  16689472 tgtgagagttaacttaaaatctgaaaactggagaatcgtgccacgatggagaagc-tcgttccgcgattgttgaagcaagtttttgaagcagtcactgga 16689374  T
Q  201 aatttcgtgccacgatgaagccgcatcgtgccacgatggcatcgctgaagataaaaataaaacgtatttt-cagcatagatttgtttcagttttttaagg 299  Q
    ||  |||||||||||||||  |||| |||| ||||||||      ||| |||||||  |||||||||||| |||   |||||||||||| ||||||||||    
T  16689373 aaaatcgtgccacgatgaaatcgcaacgtggcacgatggtgcgattgaggataaaataaaaacgtatttttcagtgaagatttgtttcaattttttaagg 16689274  T
Q  300 gtttactttccactataaatataagccttatatcagatgataaagtgtgtagaaaaacagggtttagaaaccaacatacaaactagggtttatagagaat 399  Q
    | ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||    
T  16689273 ggttactttccactataaatataagccttgtatcagatgataaagtgtgtagaaaaacagggtttagaaaccaacattcaaactagggtttatagataat 16689174  T
Q  400 ttctcttggcaacaacactaaggttgggattgttctgattcaccttgaacaaagcactattaggattgagtctcttg 476  Q
    ||||||| |||||||| ||| | |||| |||||| ||||||||||||||||||||||||||||||||||||||||||    
T  16689173 ttctctttgcaacaactctaggtttggaattgttttgattcaccttgaacaaagcactattaggattgagtctcttg 16689097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 175; E-Value: 5e-94
Query Start/End: Original strand, 101 - 476
Target Start/End: Original strand, 15311994 - 15312341
Alignment:
Q  101 tgtgacagttaacttaaaatcagaattctggagaatcgtgccacgatggagaaacatcgcgccacgattgttgaagtaagattctgaggaagctactgga 200  Q
    ||||| ||||||||||||||||||| ||||||||||||||||||||||||||| |||||| ||||||||||||||| |||||||| |||||||||||| |    
T  15311994 tgtgagagttaacttaaaatcagaaatctggagaatcgtgccacgatggagaagcatcgcaccacgattgttgaagcaagattctaaggaagctactgaa 15312093  T
Q  201 aatttcgtgccacgatgaagccgcatcgtgccacgatggcatcgctgaagataaaaataaaacgtattttcag-catagatttgtttcagttttttaagg 299  Q
    ||||||                     |||| |||||||   |||||||||||    || ||||||||||||| ||||  ||||||||||||||||||||    
T  15312094 aatttc---------------------gtgcaacgatggacgcgctgaagatatttttataacgtattttcagtcata--tttgtttcagttttttaagg 15312170  T
Q  300 gtttactttccactataaatataagccttatatcagatgataaagtgtgtagaaaaacagggtttagaaaccaacatacaaactagggtttatagagaat 399  Q
    ||||||||||||||||||||||||||||| | |       ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  15312171 gtttactttccactataaatataagccttgtttg------taaagtgtgtagaaaaacaaggtttagaaaccaacatacaaactagggtttatagagaat 15312264  T
Q  400 ttctcttggcaacaacactaaggttgggattgttctgattcaccttgaacaaagcactattaggattgagtctcttg 476  Q
    |||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||    
T  15312265 ttctcttggcaacaacactagggttgggattgttttgattcaccttgaacaaagcactattaggattgagtcgcttg 15312341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 158; E-Value: 7e-84
Query Start/End: Original strand, 101 - 476
Target Start/End: Original strand, 25699401 - 25699774
Alignment:
Q  101 tgtgacagttaacttaaaatcagaattctggagaatcgtgccacgatggagaaacatcgcgccacgattgttgaagtaagattctgagg-aagctactgg 199  Q
    ||||| ||||||||||||||||| | || | ||||  |||||||||||||||| || || |||||||||||||||  ||||| |||| | |||  |||||    
T  25699401 tgtgagagttaacttaaaatcaggaatcagaagaaatgtgccacgatggagaagcaacgtgccacgattgttgaaacaagatcctgaagcaagtcactgg 25699500  T
Q  200 aaatttcgtgccacgatgaagccgcatcgtgccacgatggcatcgctgaagataaaaata-aaacgtattttcagcatagatttgtttcagttttttaag 298  Q
    ||| |||||| ||||||| |   | | |||| |||||||| | ||||||||  || || | |||||||||||| |   ||||||||| || | |||||||    
T  25699501 aaaattcgtgacacgatggaattgtaacgtggcacgatggta-cgctgaaggaaataacataaacgtattttctgtgaagatttgttcca-tattttaag 25699598  T
Q  299 ggtttactttccactataaatataagccttatatcagatgataaagtgtgtagaaaaacagggtttagaaaccaacatacaaactagggtttatagagaa 398  Q
    |||| ||||||||||||||||||||| ||| ||||| |||||||||||||||||||| ||||||||| || |||||||||||||||||||||||||||||    
T  25699599 ggtt-actttccactataaatataagtcttgtatcatatgataaagtgtgtagaaaa-cagggtttaaaagccaacatacaaactagggtttatagagaa 25699696  T
Q  399 tttctcttggcaacaacactaaggttgggattgttctgattcaccttgaacaaagcactattaggattgagtctcttg 476  Q
    ||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  25699697 tttctcttggcaacaacactagggttgggattgttttgattcaccttgaacaaagcactattaggattgagtctcttg 25699774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 101 - 336
Target Start/End: Original strand, 40636868 - 40637102
Alignment:
Q  101 tgtgacagttaacttaaaatcagaattctggagaatcgtgccacgatggagaaacatcgcgccacgattgttgaagtaagattctgaggaagctactgga 200  Q
    ||||| ||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||    
T  40636868 tgtgagagttaacttaaaatcagaattttggagaatcgtgccacgatggagaagcatcgcgccacgattgttgaagcaagattctgaggaagctactgga 40636967  T
Q  201 aatttcgtgccacgatgaagccgcatcgtgccacgatggcatcgctgaagataaaaataaaacgta-ttttcagcatagatttgtttcagttttttaagg 299  Q
    |||||||||||||||||||||||||||||||||||||||   |||||||||||    ||||||||| |||||||   |||||||||||||||||||||||    
T  40636968 aatttcgtgccacgatgaagccgcatcgtgccacgatggacgcgctgaagatatttttaaaacgtatttttcag-tcagatttgtttcagttttttaagg 40637066  T
Q  300 gtttactttccactataaatataagccttatatcaga 336  Q
    | ||||||| |||||||||||||  |||| |||||||    
T  40637067 gattacttt-cactataaatatagaccttgtatcaga 40637102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 133; E-Value: 6e-69
Query Start/End: Original strand, 260 - 476
Target Start/End: Original strand, 4569907 - 4570119
Alignment:
Q  260 aaacgtattttcagcatagatttgtttcagttttttaagggtttactttccactataaatataagccttatatcagatgataaagtgtgtagaaaaacag 359  Q
    ||||||||||||||   ||||||||| || | ||||||||||| |||||| |||||||||||||||||| |||||||||||||||||||||||||| |||    
T  4569907 aaacgtattttcagtgaagatttgttcca-tattttaagggtt-actttc-actataaatataagccttgtatcagatgataaagtgtgtagaaaa-cag 4570002  T
Q  360 ggtttagaaaccaacatacaaactagggtttatagagaatttctcttggcaacaacactaaggttgggattgttctgattcaccttgaacaaagcactat 459  Q
     |||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||| |||||||||||||||||| ||||||    
T  4570003 agtttagaagccaacatacaaactagggtttatagagaatttctcttggcaacatcactagggttgggattgttttgattcaccttgaacaaaacactat 4570102  T
Q  460 taggattgagtctcttg 476  Q
    |||||| ||||||||||    
T  4570103 taggatcgagtctcttg 4570119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 305 - 476
Target Start/End: Complemental strand, 13072307 - 13072138
Alignment:
Q  305 ctttccactataaatataagccttatatcagatgataaagtgtgtagaaaaacagggtttagaaaccaacatacaaactagggtttatagagaatttctc 404  Q
    |||||||||||| |||||| |||| |||||||||| | | ||||||||||| || ||||||||| |||||||||||||||||||||||||||||||||||    
T  13072307 ctttccactatagatataaaccttgtatcagatga-atattgtgtagaaaa-caaggtttagaagccaacatacaaactagggtttatagagaatttctc 13072210  T
Q  405 ttggcaacaacactaaggttgggattgttctgattcaccttgaacaaagcactattaggattgagtctcttg 476  Q
    ||||||||| ||||| ||||||||||||| |||||||||||||||||| |||||||| ||||||||||||||    
T  13072209 ttggcaacatcactagggttgggattgttttgattcaccttgaacaaatcactattatgattgagtctcttg 13072138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 316 - 476
Target Start/End: Original strand, 16638692 - 16638852
Alignment:
Q  316 aaatataagccttatatcagatgataaagtgtgtagaaaaacagggtttagaaaccaacatacaaactagggtttatagagaatttctcttggcaac-aa 414  Q
    |||||||| |||| |||||||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| ||    
T  16638692 aaatataaaccttgtatcagatgaaaaagtgtgtagaaaa-cagggtttagaagccaacatacaaactagggtttatagagaatttctctttgcaacaaa 16638790  T
Q  415 cactaaggttgggattgttctgattcaccttgaacaaagcactattaggattgagtctcttg 476  Q
    ||||| ||||||||||||| ||||||||||| |||||| |||| ||||||||||||||||||    
T  16638791 cactagggttgggattgttttgattcaccttaaacaaaacactgttaggattgagtctcttg 16638852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 353 - 476
Target Start/End: Original strand, 47566394 - 47566518
Alignment:
Q  353 aaaacagggtttagaaaccaacatacaaactagggtttatagagaatttctcttggcaac-aacactaaggttgggattgttctgattcaccttgaacaa 451  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||| ||||||| ||||| ||||||| |||||||| ||||||||    
T  47566394 aaaacagggtttagaagccaacatacaaactagggtttatagagaatttatcttggcaacaaacactagggttgagattgttttgattcacattgaacaa 47566493  T
Q  452 agcactattaggattgagtctcttg 476  Q
    |||||||||||||||||||||||||    
T  47566494 agcactattaggattgagtctcttg 47566518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 343 - 476
Target Start/End: Original strand, 55822159 - 55822290
Alignment:
Q  343 agtgtgtagaaaaacagggtttagaaaccaacatacaaactagggtttatagagaatttctcttggcaacaacactaaggttgggattgttctgattcac 442  Q
    |||||||||||||||| ||||||||  |||||| ||||| ||||||||||||||||| ||||||||||||||| ||| ||||||||||||| ||||||||    
T  55822159 agtgtgtagaaaaacaaggtttaga--ccaacaaacaaattagggtttatagagaatctctcttggcaacaactctagggttgggattgttttgattcac 55822256  T
Q  443 cttgaacaaagcactattaggattgagtctcttg 476  Q
    |||||||||| |||||||||||||||||||||||    
T  55822257 cttgaacaaaacactattaggattgagtctcttg 55822290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 379 - 476
Target Start/End: Complemental strand, 7050511 - 7050414
Alignment:
Q  379 aaactagggtttatagagaatttctcttggcaacaacactaaggttgggattgttctgattcaccttgaacaaagcactattaggattgagtctcttg 476  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||| |||||||||||||||||||||||    
T  7050511 aaactagggtttatagagaatttctcttggcaacaacactaaggttgtgattgttttgattcaccttgaacaaaacactattaggattgagtctcttg 7050414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 353 - 476
Target Start/End: Original strand, 4558212 - 4558336
Alignment:
Q  353 aaaacagggtttagaaaccaacatacaaactagggtttatagagaatttctcttggcaac-aacactaaggttgggattgttctgattcaccttgaacaa 451  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||| || |||| |  || ||||| |||||||||||    
T  4558212 aaaacagggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggctgggttgtttttgatttaccttgaacaa 4558311  T
Q  452 agcactattaggattgagtctcttg 476  Q
    |||||||||||||||||||||||||    
T  4558312 agcactattaggattgagtctcttg 4558336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 352 - 476
Target Start/End: Original strand, 36769379 - 36769504
Alignment:
Q  352 aaaaacagggtttagaaaccaacatacaaactagggtttatagagaatttctcttggcaac-aacactaaggttgggattgttctgattcaccttgaaca 450  Q
    ||||||| ||||||||| |||||||||||||||||||||  |||||||||||||||||||| ||||||| ||||||||||||| ||||||||||||||||    
T  36769379 aaaaacaaggtttagaagccaacatacaaactagggtttgaagagaatttctcttggcaacaaacactagggttgggattgttttgattcaccttgaaca 36769478  T
Q  451 aagcactattaggattgagtctcttg 476  Q
    || |||||||||||| |||| |||||    
T  36769479 aaacactattaggatcgagtttcttg 36769504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 353 - 476
Target Start/End: Original strand, 36771297 - 36771421
Alignment:
Q  353 aaaacagggtttagaaaccaacatacaaactagggtttatagagaatttctcttggcaac-aacactaaggttgggattgttctgattcaccttgaacaa 451  Q
    |||| ||||||||||| |||||||||||||||||||||  |||||||||||||||||||| ||||||| ||||| ||||||| |||||||||||||||||    
T  36771297 aaaatagggtttagaagccaacatacaaactagggtttgaagagaatttctcttggcaacaaacactagggttgagattgttttgattcaccttgaacaa 36771396  T
Q  452 agcactattaggattgagtctcttg 476  Q
    | |||||||| ||||||||||||||    
T  36771397 aacactattatgattgagtctcttg 36771421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 107 - 322
Target Start/End: Complemental strand, 8631956 - 8631742
Alignment:
Q  107 agttaacttaaaatcagaattctggagaatcgtgccacgatggagaaacatcgcgccacgattgttgaagtaagattct-gaggaagctactggaaattt 205  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| | ||| |||||||||||||||| || ||||| ||  || | |||  |||  |    
T  8631956 agttaacttaaaatcagaattctggagaatcgtgccacgatggagaagcttcgtgccacgattgttgaagcaaaattctggaacaatc-actaaaaaaat 8631858  T
Q  206 cgtgccacgatgaagccgcatcgtgccacgatggcatcgctgaagataaaaataaaacgtattttcagcatagatttgtttcagttttttaagggtttac 305  Q
    ||||||| |||     || |||||||||||||||      ||||||||||||||||||||||||| |    |||||||||||||||||||||||| ||||    
T  8631857 cgtgccaagattggatcgaatcgtgccacgatggtgcgattgaagataaaaataaaacgtatttttattgaagatttgtttcagttttttaagggattac 8631758  T
Q  306 tttccactataaatata 322  Q
    ||| |||||||||||||    
T  8631757 ttt-cactataaatata 8631742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 348 - 465
Target Start/End: Original strand, 26557636 - 26557752
Alignment:
Q  348 gtagaaaaacagggtttagaaaccaacatacaaactagggtttatagagaatttctcttggcaacaa-cactaaggttgggattgttctgattcaccttg 446  Q
    |||||||||||||| |||||||| || | ||||||||||||||||||||| |||||||||||||||| ||||| ||||||||||||| |||||||||||     
T  26557636 gtagaaaaacagggattagaaacaaaaa-acaaactagggtttatagaga-tttctcttggcaacaaacactagggttgggattgttttgattcacctta 26557733  T
Q  447 aacaaagcactattaggat 465  Q
    |||||| ||||||||||||    
T  26557734 aacaaaacactattaggat 26557752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 101 - 336
Target Start/End: Original strand, 47868195 - 47868429
Alignment:
Q  101 tgtgacagttaacttaaaatcagaattctggagaatcgtgccacgatggagaaacatcgcgccacgattgttgaagtaagattct-gaggaagctactgg 199  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||| |||| | ||| | ||| |||||||||| || ||| | ||| || | |||||    
T  47868195 tgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatgaagaagcttcgtgtcaccattgttgaagcaaaattttggagcaatc-actgg 47868293  T
Q  200 aaatttcgtgccacgatgaagccgcatcgtgccacgatggcatcgctgaagataaaaataaaacgtattttcagcatagatttgtttcagttttttaagg 299  Q
    |||  ||||||||||||     |  ||||||||||||| |      ||||||||||||||||||||||||| |    |||||||||||||||||||||||    
T  47868294 aaaaatcgtgccacgattggatctaatcgtgccacgatagtgcgattgaagataaaaataaaacgtatttttattgaagatttgtttcagttttttaagg 47868393  T
Q  300 gtttactttccactataaatataagccttatatcaga 336  Q
    | ||||||| |||||||||||||  |||| |||||||    
T  47868394 gattacttt-cactataaatatagaccttgtatcaga 47868429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 353 - 476
Target Start/End: Complemental strand, 25614200 - 25614077
Alignment:
Q  353 aaaacagggtttagaaaccaacatacaaactagggtttatagagaatttctcttggcaacaa-cactaaggttgggattgttctgattcaccttgaacaa 451  Q
    |||||||  ||||||| ||||||||||| ||| ||||||||||||||||||||||| ||||| ||||| ||||| ||||||| |||||||| ||||||||    
T  25614200 aaaacagaatttagaagccaacatacaa-ctatggtttatagagaatttctcttggtaacaaacactagggttgagattgttttgattcacattgaacaa 25614102  T
Q  452 agcactattaggattgagtctcttg 476  Q
    | |||| |||| |||||||||||||    
T  25614101 aacactgttagaattgagtctcttg 25614077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 101 - 186
Target Start/End: Original strand, 6764654 - 6764739
Alignment:
Q  101 tgtgacagttaacttaaaatcagaattctggagaatcgtgccacgatggagaaacatcgcgccacgattgttgaagtaagattctg 186  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||| |||| | ||| |||||||||||||||| || ||||||    
T  6764654 tgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatgtagaagcttcgtgccacgattgttgaagcaaaattctg 6764739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 358 - 476
Target Start/End: Complemental strand, 16186110 - 16185993
Alignment:
Q  358 agggtttagaaaccaacatacaaactagggtttatagagaatttctcttggcaaca-acactaaggttgggattgttctgattcaccttgaacaaagcac 456  Q
    ||||||||||||| |||| ||||||||||||||| ||||| |||||||  ||   | |||||||||||||||||||| |||||||||||||||||| |||    
T  16186110 agggtttagaaacaaaca-acaaactagggtttagagaga-tttctctaagcgggagacactaaggttgggattgttttgattcaccttgaacaaaacac 16186013  T
Q  457 tattaggattgagtctcttg 476  Q
    | ||||||||||||||||||    
T  16186012 tgttaggattgagtctcttg 16185993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 348 - 476
Target Start/End: Complemental strand, 3982462 - 3982336
Alignment:
Q  348 gtagaaaaacagggtttagaaaccaacatacaaactagggtttatagagaatttctcttggcaacaa-cactaaggttgggattgttctgattcaccttg 446  Q
    ||||||||| |||||| |||||| |||| ||||||||||||| |||| || |||||||||||||||| ||||| ||||| ||||||| | ||||||||||    
T  3982462 gtagaaaaatagggttcagaaacaaaca-acaaactagggttcatagtga-tttctcttggcaacaaacactagggttgagattgtttttattcaccttg 3982365  T
Q  447 aacaaagcactattaggattgagtctcttg 476  Q
     | ||| ||||||||||||||||| |||||    
T  3982364 gagaaa-cactattaggattgagtttcttg 3982336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 352 - 476
Target Start/End: Complemental strand, 4874760 - 4874636
Alignment:
Q  352 aaaaacagggtttagaaaccaacatacaaactagggtttatagagaatttctcttggcaacaa-cactaaggttgggattgttctgattcaccttgaaca 450  Q
    ||||||| ||||||||| |||||| |||||||||| |||| |||||||| |||| | |||||| |||||  |||||| ||||| ||||||||||||| ||    
T  4874760 aaaaacaaggtttagaagccaacaaacaaactaggatttaaagagaatt-ctctagacaacaaacactagagttgggtttgttttgattcaccttgatca 4874662  T
Q  451 aagcactattaggattgagtctcttg 476  Q
    || |||||||| ||| ||||||||||    
T  4874661 aaacactattaagatagagtctcttg 4874636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 107 - 186
Target Start/End: Complemental strand, 2485386 - 2485308
Alignment:
Q  107 agttaacttaaaatcagaattctggagaatcgtgccacgatggagaaacatcgcgccacgattgttgaagtaagattctg 186  Q
    |||||||||||||||||| ||| |||||||||||||||||||||||| | ||| |||||||||||||||| || ||||||    
T  2485386 agttaacttaaaatcaga-ttcaggagaatcgtgccacgatggagaagcttcgtgccacgattgttgaagcaaaattctg 2485308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 101 - 154
Target Start/End: Complemental strand, 26086292 - 26086239
Alignment:
Q  101 tgtgacagttaacttaaaatcagaattctggagaatcgtgccacgatggagaaa 154  Q
    ||||| ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  26086292 tgtgagagttaacttaaaatcagaattctagagaatcgtgccacgatggagaaa 26086239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 350 - 448
Target Start/End: Complemental strand, 32274184 - 32274087
Alignment:
Q  350 agaaaaacagggtttagaaaccaacatacaaactagggtttatagagaatttctcttggcaacaa-cactaaggttgggattgttctgattcaccttgaa 448  Q
    ||||||||| ||||||||| |||||| ||||||||| ||||||||||| ||||| |||||||||| |||||  |||| ||||||| ||||||||||||||    
T  32274184 agaaaaacaaggtttagaagccaaca-acaaactagagtttatagaga-tttctattggcaacaaacactagagttgagattgttttgattcaccttgaa 32274087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 246 - 336
Target Start/End: Original strand, 6764778 - 6764867
Alignment:
Q  246 tgaagataaaaataaaacgtattttcagcatagatttgtttcagttttttaagggtttactttccactataaatataagccttatatcaga 336  Q
    ||||||||||||||||||||||||| |    |||||||||||| ||||||||||| ||||||| |||||||||||||  |||| |||||||    
T  6764778 tgaagataaaaataaaacgtatttttattgaagatttgtttcatttttttaagggattacttt-cactataaatatagaccttgtatcaga 6764867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 382 - 476
Target Start/End: Complemental strand, 5337035 - 5336939
Alignment:
Q  382 ctagggtttatagagaatttctcttggcaacaa-cactaa--ggttgggattgttctgattcaccttgaacaaagcactattaggattgagtctcttg 476  Q
    ||||||||||||||||||| || |||||||||| |||||   ||||| ||||||| ||| |||||||||| ||| |||| ||||||||||||||||||    
T  5337035 ctagggtttatagagaatt-ctattggcaacaaacactatatggttgagattgttttgactcaccttgaataaaacactgttaggattgagtctcttg 5336939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 246 - 336
Target Start/End: Complemental strand, 2485269 - 2485178
Alignment:
Q  246 tgaagataaaaataaaacgtattttcagcatagatttgtttcag--ttttttaagggtttactttccactataaatataagccttatatcaga 336  Q
    ||||||||||||||||||||||||| |    |||||||||||||  ||||||||||| ||||||| |||||||||||||  |||| |||||||    
T  2485269 tgaagataaaaataaaacgtatttttattgaagatttgtttcagttttttttaagggattacttt-cactataaatatagaccttgtatcaga 2485178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 292 - 365
Target Start/End: Complemental strand, 7050568 - 7050499
Alignment:
Q  292 ttttaagggtttactttccactataaatataagccttatatcagatgataaagtgtgtagaaaaac-agggttta 365  Q
    ||||||||||| ||||||||||||||||||||||||| ||    |||||||||||||||||||||| ||||||||    
T  7050568 ttttaagggtt-actttccactataaatataagccttgta----atgataaagtgtgtagaaaaactagggttta 7050499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 113 - 175
Target Start/End: Complemental strand, 7050790 - 7050728
Alignment:
Q  113 cttaaaatcagaattctggagaatcgtgccacgatggagaaacatcgcgccacgattgttgaa 175  Q
    ||||||||||| | ||||||||| ||||||||||| ||||| || || |||||||||||||||    
T  7050790 cttaaaatcaggaatctggagaaacgtgccacgatagagaagcaacgtgccacgattgttgaa 7050728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 358 - 431
Target Start/End: Original strand, 9022367 - 9022440
Alignment:
Q  358 agggtttagaaaccaacatacaaactagggtttatagagaatttctcttggcaac-aacactaaggttgggattg 431  Q
    |||||||||||  ||||||  |||||||||||| ||||||| ||||||||||||| ||||||| |||||||||||    
T  9022367 agggtttagaagtcaacatcaaaactagggtttgtagagaa-ttctcttggcaacaaacactatggttgggattg 9022440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 305 - 339
Target Start/End: Original strand, 36769301 - 36769335
Alignment:
Q  305 ctttccactataaatataagccttatatcagatga 339  Q
    |||||||||||||||||||||||| ||||||||||    
T  36769301 ctttccactataaatataagccttgtatcagatga 36769335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 107 - 149
Target Start/End: Complemental strand, 37089908 - 37089866
Alignment:
Q  107 agttaacttaaaatcagaattctggagaatcgtgccacgatgg 149  Q
    |||||||||||||||||| ||||| ||||||||| ||||||||    
T  37089908 agttaacttaaaatcagatttctgcagaatcgtggcacgatgg 37089866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 101 - 149
Target Start/End: Complemental strand, 3825112 - 3825064
Alignment:
Q  101 tgtgacagttaacttaaaatcagaattctggagaatcgtgccacgatgg 149  Q
    ||||| |||||||||||||||||  ||||| ||||||||| ||||||||    
T  3825112 tgtgagagttaacttaaaatcaggtttctgcagaatcgtgacacgatgg 3825064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 101 - 149
Target Start/End: Original strand, 7941133 - 7941181
Alignment:
Q  101 tgtgacagttaacttaaaatcagaattctggagaatcgtgccacgatgg 149  Q
    ||||| |||||||||||||||||  ||||| ||||||||| ||||||||    
T  7941133 tgtgagagttaacttaaaatcaggtttctgcagaatcgtggcacgatgg 7941181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 101 - 176
Target Start/End: Original strand, 16631068 - 16631143
Alignment:
Q  101 tgtgacagttaacttaaaatcagaattctggagaa-tcgtgccacgatggagaaacatcgcgccacgattgttgaag 176  Q
    ||||| |||||||||||||||||  ||||||| || ||||||||||||  |||| || || ||||||||||||||||    
T  16631068 tgtgagagttaacttaaaatcagg-ttctggaaaaatcgtgccacgattcagaagcaacgtgccacgattgttgaag 16631143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 292; Significance: 1e-164; HSPs: 29)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 292; E-Value: 1e-164
Query Start/End: Original strand, 101 - 476
Target Start/End: Complemental strand, 9021638 - 9021264
Alignment:
Q  101 tgtgacagttaacttaaaatcagaattctggagaatcgtgccacgatggagaaacatcgcgccacgattgttgaagtaagattctgaggaagctactgga 200  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||| |||||||||||||||||||||||    
T  9021638 tgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatggagaagcatcgcgtcacgattgttgaagcaagattctgaggaagctactgga 9021539  T
Q  201 aatttcgtgccacgatgaagccgcatcgtgccacgatggcatcgctgaagataaaaataaaacgtattttcagcatagatttgtttcagttttttaaggg 300  Q
    | |||||||||||||||||||||||| |||||||||||| ||| ||||||||||   ||||||||||||||||  |||||||||||||||||||||||||    
T  9021538 attttcgtgccacgatgaagccgcattgtgccacgatggtatcactgaagataattttaaaacgtattttcagtttagatttgtttcagttttttaaggg 9021439  T
Q  301 tttactttccactataaatataagccttatatcagatgataaagtgtgtagaaaaacagggtttagaaaccaacatacaaactagggtttatagagaatt 400  Q
    |||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9021438 tttacttt-cactataaatataagccttgtatcagatgataaagtgtgtagaaaaacagggtttagaaaccaacatacaaactagggtttatagagaatt 9021340  T
Q  401 tctcttggcaacaacactaaggttgggattgttctgattcaccttgaacaaagcactattaggattgagtctcttg 476  Q
    |||||| |||||||||||| |||| |||||||| |||||||||||||||||| |||||||||||||||||||||||    
T  9021339 tctctttgcaacaacactagggttcggattgttttgattcaccttgaacaaaacactattaggattgagtctcttg 9021264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 273; E-Value: 1e-152
Query Start/End: Original strand, 101 - 476
Target Start/End: Complemental strand, 29555317 - 29554942
Alignment:
Q  101 tgtgacagttaacttaaaatcagaattctggagaatcgtgccacgatggagaaacatcgcgccacgattgttgaagtaagattctgaggaagctactgga 200  Q
    ||||| ||||||||||||||||||| ||||||||||||||| ||||||||||| |||||||||||||||||||||| |||||||||||| ||||| ||||    
T  29555317 tgtgagagttaacttaaaatcagaaatctggagaatcgtgctacgatggagaagcatcgcgccacgattgttgaagcaagattctgagggagctattgga 29555218  T
Q  201 aatttcgtgccacgatgaagccgcatcgtgccacgatggcatcgctgaagataaaaataaaacgtatttt-cagcatagatttgtttcagttttttaagg 299  Q
    |||||||||||||||||   | |||||||||||||||||   |||||||||||||||||||||||||||| |||  ||||||||||||||||||||||||    
T  29555217 aatttcgtgccacgatggccctgcatcgtgccacgatggtcgcgctgaagataaaaataaaacgtatttttcagt-tagatttgtttcagttttttaagg 29555119  T
Q  300 gtttactttccactataaatataagccttatatcagatgataaagtgtgtagaaaaacagggtttagaaaccaacatacaaactagggtttatagagaat 399  Q
    ||||||||| |||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||    
T  29555118 gtttacttttcactataaatataagcgttgtatcagatgataaagtgtgtagaaaaacagggtttagaaaccatcatacaaactagggtttttagagaat 29555019  T
Q  400 ttctcttggcaacaacactaaggttgggattgttctgattcaccttgaacaaagcactattaggattgagtctcttg 476  Q
    |||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  29555018 ttctcttggcaacaacactagggttgggattgttttgattcaccttgaacaaagcactattaggattgagtctcttg 29554942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 101 - 476
Target Start/End: Original strand, 25684296 - 25684668
Alignment:
Q  101 tgtgacagttaacttaaaatcagaattctggagaatcgtgccacgatggagaaacatcgcgccacgattgttgaagtaagattctgaggaagctactgga 200  Q
    ||||| ||||||||||||||||||| ||||||| ||||||||||||||||||| |||||||||||||| ||||||| |||||||   |||||  ||||||    
T  25684296 tgtgagagttaacttaaaatcagaaatctggagcatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 25684395  T
Q  201 aatttcgtgccacgatgaagccgcatcgtgccacgatggcatcgctgaagataaaaataaaacgtattttcagcatagatttgtttcagttttttaaggg 300  Q
    |||||||||||||||||||| ||||||| ||||||||||   |||||||||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  25684396 aatttcgtgccacgatgaagacgcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcag-ttagatttgtttcagttttttaaggg 25684494  T
Q  301 tttactttccactataaatataagccttatatcagatgat-aaagtgtgtagaaaaacagggtttagaaaccaacatacaaactagggtttatagagaat 399  Q
    |||||||||||||||||||| || |||| ||||||||||| |||||||||||||||||| |||||||  ||||||| |||||||||||||||||||||||    
T  25684495 tttactttccactataaatacaa-ccttgtatcagatgataaaagtgtgtagaaaaacaaggtttag--accaacaaacaaactagggtttatagagaat 25684591  T
Q  400 ttctcttggcaacaacactaaggttgggattgttctgattcaccttgaacaaagcactattaggattgagtctcttg 476  Q
     |||||| |||||||| ||| ||||||||||||| |||||||||||||||||| ||||||||||||||| |||||||    
T  25684592 ctctcttagcaacaactctagggttgggattgttttgattcaccttgaacaaatcactattaggattgaatctcttg 25684668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 109 - 476
Target Start/End: Original strand, 28895161 - 28895527
Alignment:
Q  109 ttaacttaaaatcagaattctggagaatcgtgccacgatggagaaacatcgcgccacgattgttgaagtaagattctgaggaagctactggaaatttcgt 208  Q
    |||||||||||| | |||| |||||||||||||||||||| |||| |||||||||||||||||||||| |||||||   |||||||||||||||  ||||    
T  28895161 ttaacttaaaataaaaattttggagaatcgtgccacgatgtagaagcatcgcgccacgattgttgaagcaagattcctgggaagctactggaaaaatcgt 28895260  T
Q  209 gccacgatgaagccgcatcgtgccacgatggcatcgctgaagataaaaataaaacgtattttcagcatagatttgtttcagttttttaagggtttacttt 308  Q
    ||||||||||||| |   |||||||||||||   || ||||||||||||||||||||||||||||  ||||||||||||||||||| |||||||||||||    
T  28895261 gccacgatgaagcagtgccgtgccacgatggtcgcggtgaagataaaaataaaacgtattttcagt-tagatttgtttcagtttttaaagggtttacttt 28895359  T
Q  309 ccactataaatataagccttatatcagatgataaa-gtgtgtagaaaaacagggtttagaaaccaacatacaaactagggtttatagagaatttctcttg 407  Q
    |||||||||||| | ||||| |||||||||||||| | ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  28895360 ccactataaataca-gccttgtatcagatgataaaagggtgtagaaaaacaaggtttagaaaccaacatacaaactagggtttatagagaatttctcttg 28895458  T
Q  408 gcaacaacactaaggttgggattgttctgattcaccttgaacaaagcactattaggattgagtctcttg 476  Q
    |||||||| ||| ||||| ||||||| |||||||||||||||||| |||||||||||||||||||||||    
T  28895459 gcaacaactctagggttgagattgttttgattcaccttgaacaaaacactattaggattgagtctcttg 28895527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 101 - 476
Target Start/End: Original strand, 28327561 - 28327933
Alignment:
Q  101 tgtgacagttaacttaaaatcagaattctggagaatcgtgccacgatggagaaacatcgcgccacgattgttgaagtaagattctgaggaagctactgga 200  Q
    ||||| ||||||||||||||||||| ||||||| ||||||||||||||||||| |||||||||||||| | ||||| |||||||   |||||  ||||||    
T  28327561 tgtgagagttaacttaaaatcagaaatctggagcatcgtgccacgatggagaagcatcgcgccacgatggctgaagcaagattcctgggaagacactgga 28327660  T
Q  201 aatttcgtgccacgatgaagccgcatcgtgccacgatggcatcgctgaagataaaaataaaacgtattttcagcatagatttgtttcagttttttaaggg 300  Q
      |||||||||||||||||||| ||||| ||||||||||   |||||||||||||||||||||||||||||||  |||||||||||||||||| ||||||    
T  28327661 tttttcgtgccacgatgaagcctcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcag-ttagatttgtttcagttttataaggg 28327759  T
Q  301 tttactttccactataaatataagccttatatcagatgat-aaagtgtgtagaaaaacagggtttagaaaccaacatacaaactagggtttatagagaat 399  Q
    ||||||||||||||||||||  |||||| ||||||||||| |||||||||||||||||| |||||||  ||||||| |||||||||||||||||||||||    
T  28327760 tttactttccactataaata-cagccttgtatcagatgataaaagtgtgtagaaaaacaaggtttag--accaacaaacaaactagggtttatagagaat 28327856  T
Q  400 ttctcttggcaacaacactaaggttgggattgttctgattcaccttgaacaaagcactattaggattgagtctcttg 476  Q
     ||||||||||||||| ||| ||||||||||||| |||||||||||||||||| |||||||||||||||||||||||    
T  28327857 ctctcttggcaacaactctagggttgggattgttttgattcaccttgaacaaaacactattaggattgagtctcttg 28327933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 101 - 476
Target Start/End: Original strand, 590466 - 590819
Alignment:
Q  101 tgtgacagttaacttaaaatcagaattctggagaatcgtgccacgatggagaaacatcgcgccacgattgttgaagtaagattctgaggaagctactgga 200  Q
    ||||| ||||||||||||||||||| ||||||| |||||||||||||  |||| |||||||||||||||||||||| |||||||   |||||||||||||    
T  590466 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgataaagaagcatcgcgccacgattgttgaagcaagattcctgggaagctactgga 590565  T
Q  201 aatttcgtgccacgatgaagccgcatcgtgccacgatggcatcgctgaagataaaaataaaacgtattttcagcatagatttgtttcagttttttaaggg 300  Q
    |||||||                     |||||||||||   |||||||||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  590566 aatttcg---------------------tgccacgatggtcgcgctgaagataaaaataaaacgtattttcagt-tagatttgtttcagttttttaaggg 590643  T
Q  301 tttactttccactataaatataagccttatatcagatgataaagtgtgtagaaaaacagggtttagaaaccaacatacaaactagggtttatagagaatt 400  Q
    ||||||||||||||||||| |||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  590644 tttactttccactataaatctaagccttgtatcagatgataaagagtgtagaaaaacagggtttagaaaccaacatacaaactagggtttatagagaatt 590743  T
Q  401 tctcttggcaacaacactaaggttgggattgttctgattcaccttgaacaaagcactattaggattgagtctcttg 476  Q
    ||||||||||||||||||  ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  590744 tctcttggcaacaacacttgggttgggattgttttgattcaccttgaacaaagcactattaggattgagtctcttg 590819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 101 - 472
Target Start/End: Complemental strand, 4813018 - 4812648
Alignment:
Q  101 tgtgacagttaacttaaaatcagaattctggagaatcgtgccacgatggagaaacatcgcgccacgattgttgaagtaagattctgaggaagctactgga 200  Q
    ||||| ||||||||||||||||||| ||||||| ||||||||||||||||||| |||||||||||||| ||||||| |||||||   |||||  ||||||    
T  4813018 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 4812919  T
Q  201 aatttcgtgccacgatgaagccgcatcgtgccacgatggcatcgctgaagataaaaataaaacgtatttt--cagcatagatttgtttcagttttttaag 298  Q
    |||||||||||||||||||||| ||||| ||||||||||   ||||||||||||||| ||||||||||||  |||  |||||||||||||||||||||||    
T  4812918 aatttcgtgccacgatgaagcctcatcgcgccacgatggtcgcgctgaagataaaaacaaaacgtattttttcagt-tagatttgtttcagttttttaag 4812820  T
Q  299 ggtttactttccactataaatataagccttatatcagatgataaa-gtgtgtagaaaaacagggtttagaaaccaacatacaaactagggtttatagaga 397  Q
    |||||||||||||||||||||| | ||||| |||||||||||||| ||||||||||||||| ||||||||  |||||| ||||||||||||| |||||||    
T  4812819 ggtttactttccactataaataca-gccttgtatcagatgataaaagtgtgtagaaaaacaaggtttaga--ccaacaaacaaactagggttcatagaga 4812723  T
Q  398 atttctcttggcaacaacactaaggttgggattgttctgattcaccttgaacaaagcactattaggattgagtct 472  Q
    || ||||||||||||||| ||| ||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  4812722 atctctcttggcaacaactctagggttgggattgttttgattcaccttgaacaaaacactattaggattgagtct 4812648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 101 - 476
Target Start/End: Original strand, 21033520 - 21033895
Alignment:
Q  101 tgtgacagttaacttaaaatcagaattctggagaatcgtgccacgatggagaaacatcgcgccacgattgttgaagtaagattctgaggaagctactgga 200  Q
    ||||| |||||||||||||||  ||  |||||||||||||||||||||||||| || || |||||||||||||||| ||| || ||| | ||  ||||||    
T  21033520 tgtgagagttaacttaaaatctaaaaactggagaatcgtgccacgatggagaagcaacgtgccacgattgttgaagcaagtttgtgaagcagtcactgga 21033619  T
Q  201 aatttcgtgccacgatgaagccgcatcgtgccacgatggcatcgctgaagataaaaataaaacgtattttcagcatagatttgtttcagttttttaaggg 300  Q
    ||  ||||||||| ||  |  || |||||||||||||||      ||||||||||||||||||||||||||||   ||||||||||||||||||||||||    
T  21033620 aaaatcgtgccacaattgaatcgaatcgtgccacgatggtgcgattgaagataaaaataaaacgtattttcagtgaagatttgtttcagttttttaaggg 21033719  T
Q  301 tttactttccactataaatataagccttatatcagatgataaagtgtgtagaaaaacagggtttagaaaccaacatacaaactagggtttatagagaatt 400  Q
     ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||    
T  21033720 gttactttccactataaatataagccttgtatcagatgataaagtgtgtagaaaaacagggtttagaagccaacatacaaactagggtttatagataatt 21033819  T
Q  401 tctcttggcaacaacactaaggttgggattgttctgattcaccttgaacaaagcactattaggattgagtctcttg 476  Q
    ||||||||||||||||||| | ||||||||||| |||||||||||||||||| |||||||||||||||||||||||    
T  21033820 tctcttggcaacaacactaggcttgggattgttttgattcaccttgaacaaaacactattaggattgagtctcttg 21033895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 109 - 476
Target Start/End: Complemental strand, 16753044 - 16752679
Alignment:
Q  109 ttaacttaaaatcagaattctggagaatcgtgccacgatggagaaacatcgcgccacgattgttgaagtaagattctgaggaagctactggaaatttcgt 208  Q
    ||||||||||||||||| ||||||| ||||||||||||| ||||  |||||||||||||| ||||||| |||||||   |||||||||||||||  ||||    
T  16753044 ttaacttaaaatcagaaatctggagcatcgtgccacgatagagaggcatcgcgccacgatggttgaagcaagattcctgggaagctactggaaaaatcgt 16752945  T
Q  209 gccacgatgaagccgcatcgtgccacgatggcatcgctgaagataaaaataaaacgtattttcagcatagatttgtttcagttttttaagggtttacttt 308  Q
    ||||||||||||| |  ||||||||||||||   |||||||||||||||||||||||||||||||  |||||||||||||||||| ||||||||||||||    
T  16752944 gccacgatgaagcagggtcgtgccacgatggtcgcgctgaagataaaaataaaacgtattttcag-ttagatttgtttcagttttataagggtttacttt 16752846  T
Q  309 ccactataaatataagccttatatcagatgat-aaagtgtgtag-aaaaacagggtttagaaaccaacatacaaactagggtttatagagaatttctctt 406  Q
    ||||||||||||  |||||| ||||||||||| ||||||||||| ||||||| |||||||  ||||||| ||||||||||||||||||||||| ||||||    
T  16752845 ccactataaata-cagccttgtatcagatgataaaagtgtgtagaaaaaacaaggtttag--accaacaaacaaactagggtttatagagaatctctctt 16752749  T
Q  407 ggcaacaacactaaggttgggattgttctgattcaccttgaacaaagcactattaggattgagtctcttg 476  Q
    ||||||||| ||| ||||||||||||| |||||||||||||||||| |||||||||||||||||||||||    
T  16752748 ggcaacaactctagggttgggattgttttgattcaccttgaacaaaacactattaggattgagtctcttg 16752679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 101 - 476
Target Start/End: Original strand, 28332284 - 28332656
Alignment:
Q  101 tgtgacagttaacttaaaatcagaattctggagaatcgtgccacgatggagaaacatcgcgccacgattgttgaagtaagattctgaggaagctactgga 200  Q
    ||||| ||||||||||||||||||| ||||||| ||||||||||||||||||| |||||||||||||| | ||||| |||||||   |||||  ||||||    
T  28332284 tgtgagagttaacttaaaatcagaaatctggagcatcgtgccacgatggagaagcatcgcgccacgatggctgaagcaagattcctgggaagacactgga 28332383  T
Q  201 aatttcgtgccacgatgaagccgcatcgtgccacgatggcatcgctgaagataaaaataaaacgtattttcagcatagatttgtttcagttttttaaggg 300  Q
      |||||||||||||||||||| ||||| ||||||||||   |||||||||||||||||||||||||||||||  |||||||||||||||||| ||||||    
T  28332384 tttttcgtgccacgatgaagcctcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcag-ttagatttgtttcagttttataaggg 28332482  T
Q  301 tttactttccactataaatataagccttatatcagatgat-aaagtgtgtagaaaaacagggtttagaaaccaacatacaaactagggtttatagagaat 399  Q
    ||||||||||||||||||||  |||||| ||||||||||| |||||||||||||||||| |||||||  ||||| | ||||||||||||||||| |||||    
T  28332483 tttactttccactataaata-cagccttgtatcagatgataaaagtgtgtagaaaaacaaggtttag--accaataaacaaactagggtttataaagaat 28332579  T
Q  400 ttctcttggcaacaacactaaggttgggattgttctgattcaccttgaacaaagcactattaggattgagtctcttg 476  Q
     |||||||| |||||| ||| ||||||||||||| |||||||||||||||||| |||||||||||||||||||||||    
T  28332580 ctctcttggtaacaactctagggttgggattgttttgattcaccttgaacaaaacactattaggattgagtctcttg 28332656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 163; E-Value: 7e-87
Query Start/End: Original strand, 101 - 476
Target Start/End: Complemental strand, 16757776 - 16757424
Alignment:
Q  101 tgtgacagttaacttaaaatcagaattctggagaatcgtgccacgatggagaaacatcgcgccacgattgttgaagtaagattctgaggaagctactgga 200  Q
    ||||| ||||||||||||||||||| ||||||| ||||||||||||||||||  |||||||||||||| ||||||| |||||||   |||||||||||||    
T  16757776 tgtgagagttaacttaaaatcagaaatctggagcatcgtgccacgatggagaggcatcgcgccacgatggttgaagcaagattcctgggaagctactgga 16757677  T
Q  201 aatttcgtgccacgatgaagccgcatcgtgccacgatggcatcgctgaagataaaaataaaacgtattttcagcatagatttgtttcagttttttaaggg 300  Q
    ||                      |||||||||||||||   |||||||||||||||||||||||||||||||  |||||||||||||||||| ||||||    
T  16757676 aaa---------------------atcgtgccacgatggtcgcgctgaagataaaaataaaacgtattttcagt-tagatttgtttcagttttataaggg 16757599  T
Q  301 tttactttccactataaatataagccttatatcagatgataaa-gtgtgtagaaaaa-cagggtttagaaaccaacatacaaactagggtttatagagaa 398  Q
    |||||||||||||||||||| | ||||| |||||||||||||| ||||||||||||| || ||||||||  |||||| ||||||||||||||||||||||    
T  16757598 tttactttccactataaataca-gccttgtatcagatgataaaagtgtgtagaaaaaacaaggtttaga--ccaacaaacaaactagggtttatagagaa 16757502  T
Q  399 tttctcttggcaacaacactaaggttgggattgttctgattcaccttgaacaaagcactattaggattgagtctcttg 476  Q
    | ||||||| ||||||| ||| ||||||||||||| |||||||||||||||||| |||||||||||||||||||||||    
T  16757501 tctctcttgacaacaactctagggttgggattgttttgattcaccttgaacaaaacactattaggattgagtctcttg 16757424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 161; E-Value: 1e-85
Query Start/End: Original strand, 101 - 476
Target Start/End: Complemental strand, 23180091 - 23179718
Alignment:
Q  101 tgtgacagttaacttaaaatcagaattctggagaatcgtgccacgatggagaaacatcgcgccacgattgttgaagtaagattctgaggaagctactgga 200  Q
    ||||| ||||||||||||||||| | ||||||||||||||| ||||||||||| ||||| || | ||||||||||  ||||||||||||  |  ||||||    
T  23180091 tgtgagagttaacttaaaatcaggaatctggagaatcgtgctacgatggagaagcatcgtgctatgattgttgaaacaagattctgaggtcgtcactgga 23179992  T
Q  201 aatttcgtgccacgatgaagccgcatcgtgccacgatggcatcgctgaagataaaaata-aaacgtattttcagcatagatttgtttcagttttttaagg 299  Q
    ||  ||||| ||||||  |  || | |||| |||||||| | ||||||||  || |||  ||||||||||||||   ||||||||| || | |||||||     
T  23179991 aaaatcgtgtcacgattgaatcgtaacgtggcacgatggta-cgctgaaggaaataattgaaacgtattttcagtgaagatttgttcca-tattttaaga 23179894  T
Q  300 gtttactttccactataaatataagccttatatcagatgataaagtgtgtagaaaaacagggtttagaaaccaacatacaaactagggtttatagagaat 399  Q
    | | ||||||||||||||||||||| ||| |||||||||| ||   | ||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  23179893 gat-actttccactataaatataagtcttgtatcagatgaaaagaagagtagaaaaacagggtttagaagccaacatacaaactagggtttatagagaat 23179795  T
Q  400 ttctcttggcaacaacactaaggttgggattgttctgattcaccttgaacaaagcactattaggattgagtctcttg 476  Q
    |||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  23179794 ttctcttggcaacaacactagggttgggattgttttgattcaccttgaacaaagcactattaggattgagtctcttg 23179718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 126; E-Value: 9e-65
Query Start/End: Original strand, 291 - 476
Target Start/End: Original strand, 3276184 - 3276369
Alignment:
Q  291 tttttaagggtttactttccactataaatataagccttatatcagatgataaagtgtgtagaaaaacagggtttagaaaccaacatacaaactagggttt 390  Q
    |||||||| | ||||||| ||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| |||||| | ||||||||||||    
T  3276184 tttttaagaggttacttttcactataaatataagccttgtattagatgataaagtgtgtagaaaaacagggtttagaagccaacacaaaaactagggttt 3276283  T
Q  391 atagagaatttctcttggcaacaacactaaggttgggattgttctgattcaccttgaacaaagcactattaggattgagtctcttg 476  Q
    ||||||||||| |||| |||||||| | | ||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||    
T  3276284 atagagaatttttctttgcaacaactccagggttgggattgttttgatttaccttgaacaaagcactattaggattgagtctcttg 3276369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 353 - 476
Target Start/End: Original strand, 33032556 - 33032679
Alignment:
Q  353 aaaacagggtttagaaaccaacatacaaactagggtttatagagaatttctcttggcaacaacactaaggttgggattgttctgattcaccttgaacaaa 452  Q
    |||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| ||||||||||||||||||    
T  33032556 aaaacatggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaacactagggttgagattgttttgattcaccttgaacaaa 33032655  T
Q  453 gcactattaggattgagtctcttg 476  Q
    ||||||||||||||||||||||||    
T  33032656 gcactattaggattgagtctcttg 33032679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 310 - 476
Target Start/End: Complemental strand, 2267346 - 2267180
Alignment:
Q  310 cactataaatataagccttatatcagatgataaagtgtgtagaaaaacagggtttagaaaccaacatacaaactagggtttatagagaatttctcttggc 409  Q
    |||||||||||||| |||| ||||||||||  | |||||||||||| || ||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  2267346 cactataaatataaaccttgtatcagatgaatatgtgtgtagaaaa-catggtttagaagccaacatacaaactagggtttatagagaatttctcttggc 2267248  T
Q  410 aac-aacactaaggttgggattgttctgattcaccttgaacaaagcactattaggattgagtctcttg 476  Q
    ||| ||||||| ||||| ||||||| |||||||| ||||||||| |||| ||||||||||||||||||    
T  2267247 aacaaacactacggttgagattgttttgattcacgttgaacaaaacactgttaggattgagtctcttg 2267180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 353 - 476
Target Start/End: Complemental strand, 17799704 - 17799581
Alignment:
Q  353 aaaacagggtttagaaaccaacatacaaactagggtttatagagaatttctcttggcaacaacactaaggttgggattgttctgattcaccttgaacaaa 452  Q
    |||||||||||||||| ||||||||||||||||| |||||||||||||| ||| ||||||||||||| ||||||||||||| ||||||||||||||||||    
T  17799704 aaaacagggtttagaagccaacatacaaactaggatttatagagaatttgtctaggcaacaacactagggttgggattgttttgattcaccttgaacaaa 17799605  T
Q  453 gcactattaggattgagtctcttg 476  Q
     |||||||||||||||||||||||    
T  17799604 acactattaggattgagtctcttg 17799581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 353 - 476
Target Start/End: Original strand, 30423113 - 30423237
Alignment:
Q  353 aaaacagggtttagaaaccaacatacaaactagggtttatagagaatttctcttggcaac-aacactaaggttgggattgttctgattcaccttgaacaa 451  Q
    |||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||| ||||||| || || ||||||| |||||||||||||||||    
T  30423113 aaaacagggtttagaagccaacaaacaaactagggtttatagagaatttctcttggcaacaaacactagggctgagattgttttgattcaccttgaacaa 30423212  T
Q  452 agcactattaggattgagtctcttg 476  Q
    | |||| ||||||||||||||||||    
T  30423213 aacacttttaggattgagtctcttg 30423237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 352 - 468
Target Start/End: Complemental strand, 26268511 - 26268395
Alignment:
Q  352 aaaaacagggtttagaaaccaacatacaaactagggtttatagagaatttctcttggcaacaacactaaggttgggattgttctgattcaccttgaacaa 451  Q
    ||||||| ||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||  |||| ||||||| |||||||||||||||||    
T  26268511 aaaaacaaggtttagaagcctacatacaaactagggtttatagagaatttctcttggcaacaacactagagttgagattgttttgattcaccttgaacaa 26268412  T
Q  452 agcactattaggattga 468  Q
    | |||||||| ||||||    
T  26268411 aacactattaagattga 26268395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 109 - 336
Target Start/End: Complemental strand, 22685197 - 22684971
Alignment:
Q  109 ttaacttaaaatcagaattctggagaatcgtgccacgatggagaaacatcgcgccacgattgttgaagtaagattctg-aggaagctactggaaatttcg 207  Q
    |||||||||||||||||||||| ||||||||||||||||| |||| | ||| |||||||||||||||  || |||||| || || | ||||||||  | |    
T  22685197 ttaacttaaaatcagaattctgaagaatcgtgccacgatgaagaagcttcgtgccacgattgttgaaccaaaattctggagcaatc-actggaaaaattg 22685099  T
Q  208 tgccacgatgaagccgcatcgtgccacgatggcatcgctgaagataaaaataaaacgtattttcagcatagatttgtttcagttttttaagggtttactt 307  Q
    |||||||||  |  || |||||||||||||||      ||||||||||||||||||||||||| |    |||||||||||||||||||||||| ||||||    
T  22685098 tgccacgatcgaatcgaatcgtgccacgatggtgcgattgaagataaaaataaaacgtatttttattgaagatttgtttcagttttttaagggattactt 22684999  T
Q  308 tccactataaatataagccttatatcaga 336  Q
    | |||||||||||||  |||| |||||||    
T  22684998 t-cactataaatatagaccttgtatcaga 22684971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 310 - 476
Target Start/End: Original strand, 15949394 - 15949559
Alignment:
Q  310 cactataaatataagccttatatcagatgataaagtgtgtagaaaaacagggtttagaaaccaacatacaaactagggtttatagagaatttctcttggc 409  Q
    ||||||||||||||  ||| |||||||||| ||||||||  ||||||||||||||| || |||||| ||||||||||||||| |||||| |||||||  |    
T  15949394 cactataaatataaatcttgtatcagatga-aaagtgtgaggaaaaacagggtttaaaagccaacacacaaactagggtttacagagaa-ttctctttac 15949491  T
Q  410 aac-aacactaaggttgggattgttctgattcaccttgaacaaagcactattaggattgagtctcttg 476  Q
    ||| ||||||| | ||| |||||||  ||||||||||||||||| ||||||||||||  |||||||||    
T  15949492 aacaaacactaggtttgtgattgtttggattcaccttgaacaaaacactattaggatatagtctcttg 15949559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 348 - 476
Target Start/End: Original strand, 17847576 - 17847703
Alignment:
Q  348 gtagaaaaacagggtttagaaaccaacatacaaactagggtttatagagaatttctcttggcaacaa-cactaaggttgggattgttctgattcaccttg 446  Q
    ||||||||||| ||||||||||  |||| |||||||| |||||||||||| ||||||| |||||||| ||||| ||||||||||||| ||||||||||||    
T  17847576 gtagaaaaacaaggtttagaaatgaaca-acaaactaaggtttatagaga-tttctctaggcaacaaacactatggttgggattgttttgattcaccttg 17847673  T
Q  447 aacaaagcactattaggattgagtctcttg 476  Q
    ||| || ||||||||||||||| |||||||    
T  17847674 aacgaaacactattaggattgaatctcttg 17847703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 107 - 217
Target Start/End: Original strand, 3275958 - 3276069
Alignment:
Q  107 agttaacttaaaatcagaattctggagaatcgtgccacgatggagaaacatcgcgccacgattgttgaagtaagattctg-aggaagctactggaaattt 205  Q
    ||||||||||||||||||| ||||||||| ||||||||||||||||| ||  | |||||||||||||||| ||||||||| ||||||  ||| ||||  |    
T  3275958 agttaacttaaaatcagaaatctggagaaacgtgccacgatggagaagcaatgtgccacgattgttgaagcaagattctgaaggaagtcacttgaaaaat 3276057  T
Q  206 cgtgccacgatg 217  Q
    ||||||||||||    
T  3276058 cgtgccacgatg 3276069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 310 - 447
Target Start/End: Original strand, 15944733 - 15944869
Alignment:
Q  310 cactataaatataagccttatatcagatgataaagtgtgtagaaaaacagggtttagaaaccaacatacaaactagggtttatagagaatttctcttggc 409  Q
    ||||||| |||||| |||| ||||| |||| ||||||||| |||||||||||||||||| | |||| ||||| ||||||||||||||||  |||||||||    
T  15944733 cactatagatataaaccttgtatcatatga-aaagtgtgtggaaaaacagggtttagaagctaacaaacaaattagggtttatagagaa-atctcttggc 15944830  T
Q  410 aac-aacactaaggttgggattgttctgattcaccttga 447  Q
    ||| ||||||| ||||  ||||| | |||||||||||||    
T  15944831 aacaaacactagggttctgattgctttgattcaccttga 15944869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 310 - 476
Target Start/End: Original strand, 28228376 - 28228539
Alignment:
Q  310 cactataaatataagccttatatcagatgataaagtgtgtagaaaaacagggtttagaaaccaacatacaaactagggtttatagagaatttctcttggc 409  Q
    |||||||||||||| ||||||  ||||||| ||| |  ||||||||||| |||||||||  ||||| | |||||| ||||||||||||| |||| |||||    
T  28228376 cactataaatataaaccttat--cagatgaaaaatta-gtagaaaaacatggtttagaaggcaacaaataaactaaggtttatagagaa-ttcttttggc 28228471  T
Q  410 aac-aacactaaggttgggattgttctgattcaccttgaacaaagcactattaggattgagtctcttg 476  Q
    ||| ||||||| |||| | | |||| | |||||||||||||||| |||||||||||| ||| ||||||    
T  28228472 aacaaacactatggttagaactgttgttattcaccttgaacaaaacactattaggatagagactcttg 28228539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 305 - 354
Target Start/End: Complemental strand, 17799769 - 17799720
Alignment:
Q  305 ctttccactataaatataagccttatatcagatgataaagtgtgtagaaa 354  Q
    ||||||||||||||||||| |||||||||||||||| | |||||||||||    
T  17799769 ctttccactataaatataaaccttatatcagatgattatgtgtgtagaaa 17799720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 428 - 476
Target Start/End: Original strand, 6376118 - 6376166
Alignment:
Q  428 attgttctgattcaccttgaacaaagcactattaggattgagtctcttg 476  Q
    |||||| |||||||||||||||||| |||| ||| ||||||||||||||    
T  6376118 attgttttgattcaccttgaacaaaacactgttaagattgagtctcttg 6376166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 348 - 451
Target Start/End: Complemental strand, 33021183 - 33021079
Alignment:
Q  348 gtagaaaaacagggtttagaaaccaacatacaaactagggtttatagagaatttctcttggcaacaa----cactaaggttgggattgttctgattcacc 443  Q
    |||||||||||  |||||||||| |||| |||||||||| |||||| ||| |||||||| |||||||    ||||| | ||| ||||||| |||||||||    
T  33021183 gtagaaaaacattgtttagaaacaaaca-acaaactagg-tttatataga-tttctcttagcaacaaacaacactaggattgagattgttttgattcacc 33021087  T
Q  444 ttgaacaa 451  Q
    ||||||||    
T  33021086 ttgaacaa 33021079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 435 - 476
Target Start/End: Complemental strand, 13985277 - 13985237
Alignment:
Q  435 tgattcaccttgaacaaagcactattaggattgagtctcttg 476  Q
    |||||||||||||| ||| |||||||||||||||||||||||    
T  13985277 tgattcaccttgaaaaaa-cactattaggattgagtctcttg 13985237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 435 - 476
Target Start/End: Complemental strand, 33839119 - 33839079
Alignment:
Q  435 tgattcaccttgaacaaagcactattaggattgagtctcttg 476  Q
    |||||||||||||| ||| |||||||||||||||||||||||    
T  33839119 tgattcaccttgaagaaa-cactattaggattgagtctcttg 33839079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 292; Significance: 1e-164; HSPs: 33)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 292; E-Value: 1e-164
Query Start/End: Original strand, 101 - 476
Target Start/End: Complemental strand, 12781751 - 12781378
Alignment:
Q  101 tgtgacagttaacttaaaatcagaattctggagaatcgtgccacgatggagaaacatcgcgccacgattgttgaagtaagattctgaggaagctactgga 200  Q
    ||||| ||||||||||||||||||| |||||| |||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||    
T  12781751 tgtgagagttaacttaaaatcagaaatctggataatcgtgccacgatggagaagcatcgcgccacgattgttgaagcaagattctgaggaagctactgga 12781652  T
Q  201 aatttcgtgccacgatgaagccgcatcgtgccacgatggcatcgctgaagataaaaataaaacgtattttcagcatagatttgtttcagttttttaaggg 300  Q
    ||||||||| ||||||||  | | |||||| ||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  12781651 aatttcgtggcacgatgaccctgtatcgtggcacgatggcatcgctgaagataaaaataaaacgtattttcag-ttagatttgtttcagttttttaaggg 12781553  T
Q  301 tttactttccactataaatataagccttatatcagatgataaagtgtgtagaaaaacagggtttagaaaccaacatacaaactagggtttatagagaatt 400  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||    
T  12781552 tttactttccactataaatataagccttgtatcagatgataaagtgtgtag-aaaacagggtttagaaaccaacattcaaactagggtttatagagaatt 12781454  T
Q  401 tctcttggcaacaacactaaggttgggattgttctgattcaccttgaacaaagcactattaggattgagtctcttg 476  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||    
T  12781453 tctcttggcaacaacactagggttgggattgttttgattcaccttaaacaaagcactattaggattgagtctcttg 12781378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 276; E-Value: 1e-154
Query Start/End: Original strand, 101 - 476
Target Start/End: Complemental strand, 20050554 - 20050179
Alignment:
Q  101 tgtgacagttaacttaaaatcagaattctggagaatcgtgccacgatggagaaacatcgcgccacgattgttgaagtaagattctgaggaagctactgga 200  Q
    ||||| |||||||||||||||| |||||||||||||||||||||||||||||| ||||| ||||||||||||| || |||||||||||||||||||||||    
T  20050554 tgtgagagttaacttaaaatcaaaattctggagaatcgtgccacgatggagaagcatcgtgccacgattgttgcagcaagattctgaggaagctactgga 20050455  T
Q  201 aatttcgtgccacgatgaagccgcatcgtgccacgatggcatcgctgaagataaaaataaaacgtattttcagcatagatttgtttcagttttttaaggg 300  Q
    | ||||||||||||||||||||||| |||||||||||||   |||||||||||    |||||||||||||||| | ||||||||||||||||||||||||    
T  20050454 attttcgtgccacgatgaagccgcaacgtgccacgatggacgcgctgaagatacttttaaaacgtattttcagtaaagatttgtttcagttttttaaggg 20050355  T
Q  301 tttactttccactataaatataagccttatatcagatgataaagtgtgtagaaaaacagggtttagaaaccaacatacaaactagggtttatagagaatt 400  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||    
T  20050354 tttactttccactataaatataagccttgtatcagatgataaagtgtgtagaaaaacagggtatagaaaccaacatacaaactagggtttatagaaaatt 20050255  T
Q  401 tctcttggcaacaacactaaggttgggattgttctgattcaccttgaacaaagcactattaggattgagtctcttg 476  Q
    |||||| |||||||| ||| ||||||||||||| |||||||||||||||||| |||||||||||||||||||||||    
T  20050254 tctctttgcaacaactctagggttgggattgttttgattcaccttgaacaaaacactattaggattgagtctcttg 20050179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 267; E-Value: 1e-149
Query Start/End: Original strand, 99 - 476
Target Start/End: Complemental strand, 20055302 - 20054922
Alignment:
Q  99 tgtgtgacagttaacttaaaatcagaattctggagaatcgtgccacgatggagaaacatcgcgccacgattgttgaagtaagattctgaggaagctactg 198  Q
    ||||||| ||||||||||||||||||||||||||||||| ||||||||||||||| |||||| ||||||||||||||| |||||||||||||||||||||    
T  20055302 tgtgtgagagttaacttaaaatcagaattctggagaatcatgccacgatggagaagcatcgcaccacgattgttgaagcaagattctgaggaagctactg 20055203  T
Q  199 gaaatttcgtgccacgatgaagccgcatcgtgccacgatggcatcgctgaagataaaaataaaacgtattttcagcatagatt---tgtttcagtttttt 295  Q
    ||| |||| ||||||||||||||||||||||||||||||||   || ||||||||    |||||||||||||||| | |||||   ||||||||||||||    
T  20055202 gaattttcatgccacgatgaagccgcatcgtgccacgatggatgcgttgaagatacttttaaaacgtattttcagtaaagattaattgtttcagtttttt 20055103  T
Q  296 aagggtttactttccactataaatataagccttatatcagatgataaagtgtgtagaaaaacagggtttagaaaccaacatacaaactagggtttataga 395  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||    
T  20055102 aagggtttactttccactataaatataagccttgtatcagatgataaagtgtgtagaaaaacagggtatagaaaccaacatacaaactaaggtttataga 20055003  T
Q  396 gaatttctcttggcaacaacactaaggttgggattgttctgattcaccttgaacaaagcactattaggattgagtctcttg 476  Q
    ||||||||||| |||||||| ||| ||||||||||||| |||||||||||||||||| |||||||||||||||||||||||    
T  20055002 gaatttctctttgcaacaactctagggttgggattgttttgattcaccttgaacaaaacactattaggattgagtctcttg 20054922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 261; E-Value: 1e-145
Query Start/End: Original strand, 101 - 476
Target Start/End: Complemental strand, 22717756 - 22717382
Alignment:
Q  101 tgtgacagttaacttaaaatcagaattctggagaatcgtgccacgatggagaaacatcgcgccacgattgttgaagtaagattctgaggaagctactgga 200  Q
    ||||| ||||||||||||||||||| |||| || ||||||||||||||||||| |||||||||||||||||||||| |||||||   |||| ||||||||    
T  22717756 tgtgagagttaacttaaaatcagaaatctgaagtatcgtgccacgatggagaagcatcgcgccacgattgttgaagcaagattcctgggaaactactgga 22717657  T
Q  201 aatttcgtgccacgatgaagccgcatcgtgccacgatggcatcgctgaagataaaaataaaacgtattttcagcatagatttgtttcagttttttaaggg 300  Q
    ||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  22717656 aaaatcgtgccacgatgaagccgcatcgtgccacgatggcatcgctgaagataaaaataaaacgtattttcag-ttagatttgtttcagttttttaaggg 22717558  T
Q  301 tttactttccactataaatataagccttatatcagatgat-aaagtgtgtagaaaaacagggtttagaaaccaacatacaaactagggtttatagagaat 399  Q
    ||||||||||||||||||||  |||||| ||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||    
T  22717557 tttactttccactataaata-cagccttgtatcagatgataaaagtgtgtagaaaaacaaggtttagaaaccaacatacaaactagggtttacagagaat 22717459  T
Q  400 ttctcttggcaacaacactaaggttgggattgttctgattcaccttgaacaaagcactattaggattgagtctcttg 476  Q
    ||||||| ||||||||  || ||||||||||||| |||||||||||||||||| |||||||||||||||||||||||    
T  22717458 ttctcttagcaacaactatagggttgggattgttttgattcaccttgaacaaaacactattaggattgagtctcttg 22717382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 257; E-Value: 1e-143
Query Start/End: Original strand, 101 - 476
Target Start/End: Complemental strand, 33674936 - 33674562
Alignment:
Q  101 tgtgacagttaacttaaaatcagaattctggagaatcgtgccacgatggagaaacatcgcgccacgattgttgaagtaagattctgaggaagctactgga 200  Q
    ||||| ||||||||||||||||||| ||| |||||||||||||||||||||||  |||||||||||||||||||||||||||||   |||||||||||||    
T  33674936 tgtgagagttaacttaaaatcagaaatctagagaatcgtgccacgatggagaagtatcgcgccacgattgttgaagtaagattcctgggaagctactgga 33674837  T
Q  201 aatttcgtgccacgatgaagccgcatcgtgccacgatggcatcgctgaagataaaaataaaacgtattttcagcatagatttgtttcagttttttaaggg 300  Q
    ||  |||||||||||||||||||  ||||||||||||||   ||||| |||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  33674836 aaaatcgtgccacgatgaagccgtgtcgtgccacgatggtcgcgctgtagataaaaataaaacgtattttcagt-tagatttgtttcagttttttaaggg 33674738  T
Q  301 tttactttccactataaatataagccttatatcagatgataaa-gtgtgtagaaaaacagggtttagaaaccaacatacaaactagggtttatagagaat 399  Q
    |||||||||||||||||||| | | ||| |||||||||||||| |||||||||||||||||||||||||||||||||| |||||| ||||||||||||||    
T  33674737 tttactttccactataaataca-gtcttgtatcagatgataaaagtgtgtagaaaaacagggtttagaaaccaacatataaactatggtttatagagaat 33674639  T
Q  400 ttctcttggcaacaacactaaggttgggattgttctgattcaccttgaacaaagcactattaggattgagtctcttg 476  Q
    |||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  33674638 ttctcttggcaacaacactagggttgggattgttttgattcaccttgaacaaagcactattaggattgagtctcttg 33674562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 252; E-Value: 1e-140
Query Start/End: Original strand, 101 - 476
Target Start/End: Original strand, 30478666 - 30479019
Alignment:
Q  101 tgtgacagttaacttaaaatcagaattctggagaatcgtgccacgatggagaaacatcgcgccacgattgttgaagtaagattctgaggaagctactgga 200  Q
    ||||| ||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||    
T  30478666 tgtgagagttaacttaaaatcagaaatctggagaatcgtgccacgatggagaagcatcgcgccacgattgttgaagcaagattctgaggaagctactgga 30478765  T
Q  201 aatttcgtgccacgatgaagccgcatcgtgccacgatggcatcgctgaagataaaaataaaacgtattttcagcatagatttgtttcagttttttaaggg 300  Q
    |||||||                     || |||||||||||||||||||||||||||||||||| |||||||  ||||||||||| |||||||||||||    
T  30478766 aatttcg---------------------tggcacgatggcatcgctgaagataaaaataaaacgtgttttcagt-tagatttgttttagttttttaaggg 30478843  T
Q  301 tttactttccactataaatataagccttatatcagatgataaagtgtgtagaaaaacagggtttagaaaccaacatacaaactagggtttatagagaatt 400  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  30478844 tttactttccactataaatataagccttgtatcagatgataaagtgtgtagaaaaacagagtttagaaaccaacatacaaactagggtttatagagaatt 30478943  T
Q  401 tctcttggcaacaacactaaggttgggattgttctgattcaccttgaacaaagcactattaggattgagtctcttg 476  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  30478944 tctcttggcaacaacactagggttgggattgttttgattcaccttgaacaaagcactattaggattgagtctcttg 30479019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 101 - 476
Target Start/End: Complemental strand, 22713026 - 22712673
Alignment:
Q  101 tgtgacagttaacttaaaatcagaattctggagaatcgtgccacgatggagaaacatcgcgccacgattgttgaagtaagattctgaggaagctactgga 200  Q
    ||||| ||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||   |||||||||||||    
T  22713026 tgtgagagttaacttaaaatcagaaatctggagaatcgtgccacgatggagaagcatcgcgccacgattgttgaagcaagattcctgggaagctactgga 22712927  T
Q  201 aatttcgtgccacgatgaagccgcatcgtgccacgatggcatcgctgaagataaaaataaaacgtattttcagcatagatttgtttcagttttttaaggg 300  Q
    |||||||                     |||||||||||   |||||||||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  22712926 aatttcg---------------------tgccacgatggtcgcgctgaagataaaaataaaacgtattttcagt-tagatttgtttcagttttttaaggg 22712849  T
Q  301 tttactttccactataaatataagccttatatcagatgataaagtgtgtagaaaaacagggtttagaaaccaacatacaaactagggtttatagagaatt 400  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22712848 tttactttccactataaatataagccttgtatcagatgataaagtgtgtagaaaaacagggtttagaaaccaacatacaaactagggtttatagagaatt 22712749  T
Q  401 tctcttggcaacaacactaaggttgggattgttctgattcaccttgaacaaagcactattaggattgagtctcttg 476  Q
    ||||||||||||||| ||| ||||||||||||| |||||||||||||||||| |||||||||||||||||||||||    
T  22712748 tctcttggcaacaactctagggttgggattgttttgattcaccttgaacaaaacactattaggattgagtctcttg 22712673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 228; E-Value: 1e-125
Query Start/End: Original strand, 101 - 452
Target Start/End: Complemental strand, 35894771 - 35894442
Alignment:
Q  101 tgtgacagttaacttaaaatcagaattctggagaatcgtgccacgatggagaaacatcgcgccacgattgttgaagtaagattctgaggaagctactgga 200  Q
    ||||| |||||||||||||||||||||||||||||| || | ||||||||||| |||||||||||||||||||||| |||||||||||| ||||||||||    
T  35894771 tgtgagagttaacttaaaatcagaattctggagaattgtactacgatggagaagcatcgcgccacgattgttgaagcaagattctgagggagctactgga 35894672  T
Q  201 aatttcgtgccacgatgaagccgcatcgtgccacgatggcatcgctgaagataaaaataaaacgtattttcagcatagatttgtttcagttttttaaggg 300  Q
    | |||||                     |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  35894671 attttcg---------------------tgccacgatggcatcgctgaagataaaaataaaacgtattttcagt-tagatttgtttcagttttttaaggg 35894594  T
Q  301 tttactttccactataaatataagccttatatcagatgataaagtgtgtagaaaaacagggtttagaaaccaacatacaaactagggtttatagagaatt 400  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35894593 tttactttccactataaatataagccttgtatcagatgataaagtgtgtagaaaaacagggtttagaaaccaacatacaaactagggtttatagagaatt 35894494  T
Q  401 tctcttggcaacaacactaaggttgggattgttctgattcaccttgaacaaa 452  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||||||||||    
T  35894493 tctcttggcaacaacactagggttgggattgttttgattcaccttgaacaaa 35894442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 223; E-Value: 1e-122
Query Start/End: Original strand, 108 - 476
Target Start/End: Original strand, 45567069 - 45567434
Alignment:
Q  108 gttaacttaaaatcagaattctggagaatcgtgccacgatggagaaacatcgcgccacgattgttgaagtaagattctgaggaagctactggaaatttcg 207  Q
    |||||||||||||||||| ||||||| ||||||||||||||||||| |||||||||||||| ||||||| |||||||   || ||  |||||||||||||    
T  45567069 gttaacttaaaatcagaaatctggagcatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggcagacactggaaatttcg 45567168  T
Q  208 tgccacgatgaagccgcatcgtgccacgatggcatcgctgaagataaaaataaaacgtattttcagcatagatttgtttcagttttttaagggtttactt 307  Q
    ||||||||||||||| ||||| ||||||||||   |||||||||||||||||||||||||||| ||  |||||||||||||||||| |||||||||||||    
T  45567169 tgccacgatgaagcctcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtatttttagt-tagatttgtttcagttttataagggtttactt 45567267  T
Q  308 tccactataaatataagccttatatcagatgataaa-gtgtgtagaaaaacagggtttagaaaccaacatacaaactagggtttatagagaatttctctt 406  Q
    ||||||||||||| | ||||| |||||||||||||| ||||||||||||||| ||||||||  |||||| ||||||||||||||||||||||| ||||||    
T  45567268 tccactataaataca-gccttgtatcagatgataaaagtgtgtagaaaaacaaggtttaga--ccaacaaacaaactagggtttatagagaatctctctt 45567364  T
Q  407 ggcaacaacactaaggttgggattgttctgattcaccttgaacaaagcactattaggattgagtctcttg 476  Q
    ||||||||| ||| ||||||||||||| |||||||||||||||||| |||||||||||||||||||||||    
T  45567365 ggcaacaactctagggttgggattgttttgattcaccttgaacaaaacactattaggattgagtctcttg 45567434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 101 - 476
Target Start/End: Original strand, 2740594 - 2740966
Alignment:
Q  101 tgtgacagttaacttaaaatcagaattctggagaatcgtgccacgatggagaaacatcgcgccacgattgttgaagtaagattctgaggaagctactgga 200  Q
    ||||| ||||||||||||||||||| ||||||| ||||||||||||||||||| |||||||||||||| ||||||| ||||||||  |||||  ||||||    
T  2740594 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcttgggaagacactgga 2740693  T
Q  201 aatttcgtgccacgatgaagccgcatcgtgccacgatggcatcgctgaagataaaaataaaacgtattttcagcatagatttgtttcagttttttaaggg 300  Q
      ||| |||||||||||||||| ||||| | ||||||||   |||||||||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  2740694 ttttttgtgccacgatgaagcctcatcgcgtcacgatggtcgcgctgaagataaaaataaaacgtattttcag-ttagatttgtttcagttttttaaggg 2740792  T
Q  301 tttactttccactataaatataagccttatatcagatgat-aaagtgtgtagaaaaacagggtttagaaaccaacatacaaactagggtttatagagaat 399  Q
    ||||||||||||||||||||  |||||| ||||||||||| |||||||||||||||||| |||||||  ||||||| |||||||||||||||||||||||    
T  2740793 tttactttccactataaata-cagccttgtatcagatgataaaagtgtgtagaaaaacaaggtttag--accaacaaacaaactagggtttatagagaat 2740889  T
Q  400 ttctcttggcaacaacactaaggttgggattgttctgattcaccttgaacaaagcactattaggattgagtctcttg 476  Q
     ||||||||||||||| ||| ||||||||||||| |||||||| ||||||||| |||||||||||||||||||||||    
T  2740890 ctctcttggcaacaactctagggttgggattgttttgattcacattgaacaaaacactattaggattgagtctcttg 2740966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 101 - 476
Target Start/End: Original strand, 39679698 - 39680070
Alignment:
Q  101 tgtgacagttaacttaaaatcagaattctggagaatcgtgccacgatggagaaacatcgcgccacgattgttgaagtaagattctgaggaagctactgga 200  Q
    ||||| ||||||||||||||||||| ||||||| ||||||||||||||||||| |||||||||||||| ||||||| |||||||   ||||| |||||||    
T  39679698 tgtgagagttaacttaaaatcagaaatctggagcatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagatactgga 39679797  T
Q  201 aatttcgtgccacgatgaagccgcatcgtgccacgatggcatcgctgaagataaaaataaaacgtattttcagcatagatttgtttcagttttttaaggg 300  Q
      |||||||||||||||||||| ||| | ||||||||||   |||||||||||||||||||||||||||||||  |||||||||||||||||| ||||||    
T  39679798 tttttcgtgccacgatgaagcctcattgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcag-ttagatttgtttcagttttataaggg 39679896  T
Q  301 tttactttccactataaatataagccttatatcagatgat-aaagtgtgtagaaaaacagggtttagaaaccaacatacaaactagggtttatagagaat 399  Q
    ||||||||||||||||||||  |||||| ||||||||||| |||||||||||||||||| |||||  ||||||||| |||||||||||||||||||||||    
T  39679897 tttactttccactataaata-cagccttgtatcagatgataaaagtgtgtagaaaaacaaggttt--aaaccaacaaacaaactagggtttatagagaat 39679993  T
Q  400 ttctcttggcaacaacactaaggttgggattgttctgattcaccttgaacaaagcactattaggattgagtctcttg 476  Q
     ||| ||||||||||| ||| ||||||||||||| |||||||||||||||||| |||||||||||||||||||||||    
T  39679994 ctcttttggcaacaactctagggttgggattgttttgattcaccttgaacaaaacactattaggattgagtctcttg 39680070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 101 - 476
Target Start/End: Original strand, 39686636 - 39687008
Alignment:
Q  101 tgtgacagttaacttaaaatcagaattctggagaatcgtgccacgatggagaaacatcgcgccacgattgttgaagtaagattctgaggaagctactgga 200  Q
    ||||| ||||||||||||||||||| ||||||| ||||||||||||||||||| |||||||||||||| ||||||| |||||||   |||||  ||||||    
T  39686636 tgtgagagttaacttaaaatcagaaatctggagcatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 39686735  T
Q  201 aatttcgtgccacgatgaagccgcatcgtgccacgatggcatcgctgaagataaaaataaaacgtattttcagcatagatttgtttcagttttttaaggg 300  Q
      |||||||||||||||||||| || || ||||||||||   |||||||||||||||||||||||||||||||  |||||||||||||||||| ||||||    
T  39686736 tttttcgtgccacgatgaagcctcaccgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcag-ttagatttgtttcagttttataaggg 39686834  T
Q  301 tttactttccactataaatataagccttatatcagatgat-aaagtgtgtagaaaaacagggtttagaaaccaacatacaaactagggtttatagagaat 399  Q
    ||||||||||||||||||||  |||||| ||||||||||| |||||||||||||||||| |||||||  ||||||| |||||||||||||||||||||||    
T  39686835 tttactttccactataaata-cagccttgtatcagatgataaaagtgtgtagaaaaacaaggtttag--accaacaaacaaactagggtttatagagaat 39686931  T
Q  400 ttctcttggcaacaacactaaggttgggattgttctgattcaccttgaacaaagcactattaggattgagtctcttg 476  Q
     ||||||||||||||| ||| ||||||||||||| |||||||||||||||||| |||||||||||||||||||||||    
T  39686932 ctctcttggcaacaactctagggttgggattgttttgattcaccttgaacaaaacactattaggattgagtctcttg 39687008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 218; E-Value: 1e-119
Query Start/End: Original strand, 101 - 476
Target Start/End: Original strand, 2735858 - 2736230
Alignment:
Q  101 tgtgacagttaacttaaaatcagaattctggagaatcgtgccacgatggagaaacatcgcgccacgattgttgaagtaagattctgaggaagctactgga 200  Q
    ||||| ||||||||||||||||||| ||||||| ||||||||||||||||||| |||||||||||||| ||||||| |||||||   |||||  ||||||    
T  2735858 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 2735957  T
Q  201 aatttcgtgccacgatgaagccgcatcgtgccacgatggcatcgctgaagataaaaataaaacgtattttcagcatagatttgtttcagttttttaaggg 300  Q
      |||||||||||||||||||| ||||| ||||||||||   |||||||||||||||||||||||||||||||  ||||||||||||||||||||  |||    
T  2735958 tttttcgtgccacgatgaagcctcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcag-ttagatttgtttcagttttttttggg 2736056  T
Q  301 tttactttccactataaatataagccttatatcagatgat-aaagtgtgtagaaaaacagggtttagaaaccaacatacaaactagggtttatagagaat 399  Q
    ||||||||||||||||||||  |||||| ||||||||||| |||||||||||||||||| |||||||  ||||||| |||||||||||||||||||||||    
T  2736057 tttactttccactataaata-cagccttgtatcagatgataaaagtgtgtagaaaaacaaggtttag--accaacaaacaaactagggtttatagagaat 2736153  T
Q  400 ttctcttggcaacaacactaaggttgggattgttctgattcaccttgaacaaagcactattaggattgagtctcttg 476  Q
     ||||||||||||||| ||| ||||||||||||| |||||||| ||||||||| |||||||||||||||||||||||    
T  2736154 ctctcttggcaacaactctagggttgggattgttttgattcacattgaacaaaacactattaggattgagtctcttg 2736230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 101 - 476
Target Start/End: Complemental strand, 27518151 - 27517796
Alignment:
Q  101 tgtgacagttaacttaaaatcagaattctggagaatcgtgccacgatggagaaacatcgcgccacgattgttgaagtaagattctgaggaagctactgga 200  Q
    ||||| |||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||| |||||| |||||||||||||||||||||||    
T  27518151 tgtgagagttaacttaaaatcaaaattctggagaatcgtgccacgatggagaagcatcgcgccacgatttttgaagcaagattctgaggaagctactgga 27518052  T
Q  201 aatttcgtgccacgatgaagccgcatcgtgccacgatggcatcgctgaagataaaaataaaacgtattttcagcatagatttgtttcagttttttaaggg 300  Q
    |||||||                     |||||||||||   |||||||||||    ||||||||||||||||   ||||||||||||||||||||||||    
T  27518051 aatttcg---------------------tgccacgatggacgcgctgaagatatttttaaaacgtattttcagtc-agatttgtttcagttttttaaggg 27517974  T
Q  301 tttactttccactataaatataagccttatatcagatgataaagtgtgt--agaaaaacagggtttagaaaccaacatacaaactagggtttatagagaa 398  Q
    |||||||||||||||||||||||||||| ||||| ||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||    
T  27517973 tttactttccactataaatataagccttgtatcaaatgataaagtgtgtgtagaaaaacagggtttagaaaccaacatacaaactagggtttatagagaa 27517874  T
Q  399 tttctcttggcaacaacactaaggttgggattgttctgattcaccttgaacaaagcactattaggattgagtctcttg 476  Q
    |||||||| |||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  27517873 tttctctttgcaacaacactagggttgggattgttttgattcaccttgaacaaagcactattaggattgagtctcttg 27517796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 101 - 476
Target Start/End: Original strand, 17462088 - 17462461
Alignment:
Q  101 tgtgacagttaacttaaaatcagaattctggagaatcgtgccacgatggagaaacatcgcgccacgattgttgaagtaagattctgaggaagctactgga 200  Q
    ||||| ||||||||||||||||||| ||||||| ||||||||||||||||||| |||||||||||||| | ||||| |||||||   |  ||  ||||||    
T  17462088 tgtgagagttaacttaaaatcagaaatctggagcatcgtgccacgatggagaagcatcgcgccacgatggatgaagcaagattcctggtcagacactgga 17462187  T
Q  201 aatttcgtgccacgatgaagccgcatcgtgccacgatggcatcgctgaagataaaaataaaacgtatttt-cagcatagatttgtttcagttttttaagg 299  Q
    |||||||||||||||||||| | ||||| ||||||||||   |||||||||||||||||||||||||||| |||  |||||||||||||||||| |||||    
T  17462188 aatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtatttttcagt-tagatttgtttcagttttataagg 17462286  T
Q  300 gtttactttccactataaatataagccttatatcagatgataaa-gtgtgtagaaaaacagggtttagaaaccaacatacaaactagggtttatagagaa 398  Q
    ||||||||||||||||||||| | ||||| |||||||||||||| ||||||||||||||| ||||||||  |||||| ||||||||||||||||||||||    
T  17462287 gtttactttccactataaataca-gccttgtatcagatgataaaagtgtgtagaaaaacaaggtttaga--ccaacaaacaaactagggtttatagagaa 17462383  T
Q  399 tttctcttggcaacaacactaaggttgggattgttctgattcaccttgaacaaagcactattaggattgagtctcttg 476  Q
    | ||||||||||||||| ||| ||||||||||||| |||||||||||||||||| |||||||||||||||||||||||    
T  17462384 tctctcttggcaacaactctagggttgggattgttttgattcaccttgaacaaaacactattaggattgagtctcttg 17462461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 226 - 476
Target Start/End: Original strand, 17932410 - 17932659
Alignment:
Q  226 tcgtgccacgatggcatcgctgaagataaaaataaaacgtattttcagcatagatttgtttcagttttttaagggtttactttccactataaatataagc 325  Q
    ||||||||||||||   || |||||||||||||||||||||| |||||  ||||||||||||||||||||||||||||||||||||||||||||| | ||    
T  17932410 tcgtgccacgatggtcgcgttgaagataaaaataaaacgtatattcagt-tagatttgtttcagttttttaagggtttactttccactataaataca-gc 17932507  T
Q  326 cttatatcagatgataaa-gtgtgtagaaaaacagggtttagaaaccaacatacaaactagggtttatagagaatttctcttggcaacaacactaaggtt 424  Q
    ||| |||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  17932508 cttgtatcagatgataaaagtgtgtagaaaaacagggtttataaaccaacatacaaactagggtttatagagaatttctcttggcaacaacactagggtt 17932607  T
Q  425 gggattgttctgattcaccttgaacaaagcactattaggattgagtctcttg 476  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  17932608 gggattgttttgattcaccttgaacaaagcactattaggattgagtctcttg 17932659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 246 - 476
Target Start/End: Original strand, 17943334 - 17943562
Alignment:
Q  246 tgaagataaaaataaaacgtattttcagcatagatttgtttcagttttttaagggtttactttccactataaatataagccttatatcagatgataaagt 345  Q
    ||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||    
T  17943334 tgaagataaaaataaaacgtattttcagt-tagatttgtttcagttttttaagggtttactttccactataaatataagccttgtatcagatgataaggt 17943432  T
Q  346 gtgtagaaaaacagggtttagaaaccaacatacaaactagggtttatagagaatttctcttggcaacaacactaaggttgggattgttctgattcacctt 445  Q
    ||||||||||  ||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||    
T  17943433 gtgtagaaaat-agggtttagaagccaacatacaaactatggtttatagagaatttctcttggcaacaacactagggttgggattgttttgattcacctt 17943531  T
Q  446 gaacaaagcactattaggattgagtctcttg 476  Q
    ||||||| |||||||||||||||||||||||    
T  17943532 gaacaaatcactattaggattgagtctcttg 17943562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 96 - 476
Target Start/End: Complemental strand, 37171288 - 37170909
Alignment:
Q  96 atctgtgtgacagttaacttaaaatcagaattctggagaatcgtgccacgatggagaaacatcgcgccacgattgttgaagtaagattctgagg-aagct 194  Q
    |||| ||||| |||||||||||||| || | ||||||||| ||||||||||||||||| || || |||| ||||||||||  ||||| |||| | |||      
T  37171288 atctttgtgagagttaacttaaaataaggaatctggagaaacgtgccacgatggagaagcaacgtgccatgattgttgaaacaagatcctgaagcaagtc 37171189  T
Q  195 actggaaatttcgtgccacgatgaagccgcatcgtgccacgatggcatcgctgaagataaaaataaaa-cgtattttcagcatagatttgtttcagtttt 293  Q
    | || ||| |||||||||||||| |  || | |||| ||||||||   ||||||||  || || |||| |||||||||||   ||||||||| || | ||    
T  37171188 attgaaaaattcgtgccacgatggaatcgtaacgtggcacgatggtg-cgctgaaggaaataacaaaaacgtattttcagtgaagatttgttcca-tatt 37171091  T
Q  294 ttaagggtttactttccactataaatataagccttatatcagatgataaagtgtgtagaaaaacagggtttagaaaccaacatacaaactagggtttata 393  Q
    ||||||||| |||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  37171090 ttaagggtt-actttccactataaatataaaccttgtatcagatgataaagtgtgtagaaaaacagggtttagaagccaacatacaaactagggtttata 37170992  T
Q  394 gagaatttctcttggcaacaacactaaggttgggattgttctgattcaccttgaacaaagcactattaggattgagtctcttg 476  Q
    |||||||||||||||||||||||| | ||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||    
T  37170991 gagaatttctcttggcaacaacaccagggttgggattgttttgaatcaccttgaacaaagcactattaggattgagtctcttg 37170909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 158; E-Value: 7e-84
Query Start/End: Original strand, 101 - 476
Target Start/End: Original strand, 38190649 - 38191022
Alignment:
Q  101 tgtgacagttaacttaaaatcagaattctggagaatcgtgccacgatggagaaacatcgcgccacgattgttgaagtaagattctgagg-aagctactgg 199  Q
    ||||| |||||| |||||||||| | | ||||||| ||||||||||||||||| || || |||||||||||||||  ||||| |||| | |||  |||||    
T  38190649 tgtgagagttaatttaaaatcaggaatatggagaaacgtgccacgatggagaagcaacgtgccacgattgttgaaacaagatcctgaagcaagtcactgg 38190748  T
Q  200 aaatttcgtgccacgatgaagccgcatcgtgccacgatggcatcgctgaagataaaaata-aaacgtattttcagcatagatttgtttcagttttttaag 298  Q
    ||| |||||||||||||| |  || | |||| |||||||| | ||||||||  || || | ||||||||||||||   ||||||||| || | || || |    
T  38190749 aaaattcgtgccacgatgtaatcgtaacgtggcacgatggta-cgctgaaggaaataacagaaacgtattttcagtgaagatttgttcca-tattatatg 38190846  T
Q  299 ggtttactttccactataaatataagccttatatcagatgataaagtgtgtagaaaaacagggtttagaaaccaacatacaaactagggtttatagagaa 398  Q
    |||| ||||||||||||||||||||| ||| |||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||| | ||    
T  38190847 ggtt-actttccactataaatataagtcttgtatcagatgataaagtgtgtagaaaa-cagggtttagaagccaacatacaaactagggtttataaataa 38190944  T
Q  399 tttctcttggcaacaacactaaggttgggattgttctgattcaccttgaacaaagcactattaggattgagtctcttg 476  Q
    ||||||||||||||||||||| ||||||||||||| |||||||||||||||||| |||||||| ||||||||||||||    
T  38190945 tttctcttggcaacaacactagggttgggattgttttgattcaccttgaacaaaacactattaagattgagtctcttg 38191022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 101 - 217
Target Start/End: Original strand, 17943210 - 17943326
Alignment:
Q  101 tgtgacagttaacttaaaatcagaattctggagaatcgtgccacgatggagaaacatcgcgccacgattgttgaagtaagattctgaggaagctactgga 200  Q
    ||||| ||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||  ||||| ||||||||||    
T  17943210 tgtgagagttaacttaaaatcagaaatctggagaatcgtgccacgatggagaagcatcgcgccacgattgttgaagtaagatcatgaggcagctactgga 17943309  T
Q  201 aatttcgtgccacgatg 217  Q
    | |||||||||| ||||    
T  17943310 attttcgtgccatgatg 17943326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 348 - 472
Target Start/End: Original strand, 33603892 - 33604015
Alignment:
Q  348 gtagaaaaacagggtttagaaaccaacatacaaactagggtttatagagaatttctcttggcaacaa-cactaaggttgggattgttctgattcaccttg 446  Q
    ||||||||||| ||||||||||| |||| ||||||||||||||||||||| ||||| |||||||||| || || ||||||||||||| ||||||||||||    
T  33603892 gtagaaaaacatggtttagaaacaaaca-acaaactagggtttatagaga-tttcttttggcaacaaacattagggttgggattgttttgattcaccttg 33603989  T
Q  447 aacaaagcactattaggattgagtct 472  Q
    |||||| ||||||||  |||||||||    
T  33603990 aacaaaacactattataattgagtct 33604015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 246 - 336
Target Start/End: Complemental strand, 45280379 - 45280290
Alignment:
Q  246 tgaagataaaaataaaacgtattttcagcatagatttgtttcagttttttaagggtttactttccactataaatataagccttatatcaga 336  Q
    ||||||||||||||||||||||||| |    |||||||||||||||||||||||| ||||||| |||||||||||||  |||| |||||||    
T  45280379 tgaagataaaaataaaacgtatttttattgaagatttgtttcagttttttaagggattacttt-cactataaatatataccttgtatcaga 45280290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 107 - 186
Target Start/End: Complemental strand, 5377944 - 5377866
Alignment:
Q  107 agttaacttaaaatcagaattctggagaatcgtgccacgatggagaaacatcgcgccacgattgttgaagtaagattctg 186  Q
    ||||||||||||||||||||||||||||||||||| ||||||||| ||  ||| | |||||||||||||| || ||||||    
T  5377944 agttaacttaaaatcagaattctggagaatcgtgctacgatggag-aatttcgtgtcacgattgttgaagcaaaattctg 5377866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 425 - 476
Target Start/End: Complemental strand, 28459037 - 28458986
Alignment:
Q  425 gggattgttctgattcaccttgaacaaagcactattaggattgagtctcttg 476  Q
    ||||||||| |||||||||||||||||| |||||||||||||||||||||||    
T  28459037 gggattgttttgattcaccttgaacaaaacactattaggattgagtctcttg 28458986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 101 - 147
Target Start/End: Complemental strand, 45280503 - 45280457
Alignment:
Q  101 tgtgacagttaacttaaaatcagaattctggagaatcgtgccacgat 147  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||    
T  45280503 tgtgagagttaacttaaaatcagaattctggagaatcgtgccacgat 45280457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 246 - 322
Target Start/End: Complemental strand, 5377827 - 5377752
Alignment:
Q  246 tgaagataaaaataaaacgtattttcagcatagatttgtttcagttttttaagggtttactttccactataaatata 322  Q
    |||||||||||||||||| |||||| |    |||||||||||||||||||||||| ||||||| |||||||||||||    
T  5377827 tgaagataaaaataaaacttatttttattgaagatttgtttcagttttttaagggattacttt-cactataaatata 5377752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 156 - 217
Target Start/End: Original strand, 17932361 - 17932422
Alignment:
Q  156 atcgcgccacgattgttgaagtaagattctgaggaagctactggaaatttcgtgccacgatg 217  Q
    |||| |||||||||||||||  ||||| |||||| ||||||||||| |||||||||||||||    
T  17932361 atcgtgccacgattgttgaaacaagatcctgaggcagctactggaattttcgtgccacgatg 17932422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 415 - 476
Target Start/End: Original strand, 20589727 - 20589788
Alignment:
Q  415 cactaaggttgggattgttctgattcaccttgaacaaagcactattaggattgagtctcttg 476  Q
    ||||| ||||| ||||||| || ||||||||||||||| |||| ||||||||||||||||||    
T  20589727 cactatggttgtgattgttttggttcaccttgaacaaaacactgttaggattgagtctcttg 20589788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 352 - 444
Target Start/End: Complemental strand, 30262053 - 30261962
Alignment:
Q  352 aaaaacagggtttagaaaccaacatacaaactagggtttatagagaatttctcttggcaa-caacactaaggttgggattgttctgattcacct 444  Q
    ||||||| ||||||||| |||||| |||||||| |||||||||||  |||||||||||||  ||||||| ||||| ||||||| ||||||||||    
T  30262053 aaaaacatggtttagaagccaaca-acaaactacggtttatagag-ttttctcttggcaataaacactagggttgagattgttttgattcacct 30261962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 102 - 147
Target Start/End: Original strand, 17932328 - 17932373
Alignment:
Q  102 gtgacagttaacttaaaatcagaattctggagaatcgtgccacgat 147  Q
    |||| ||||||||||||||||||| |||| ||||||||||||||||    
T  17932328 gtgagagttaacttaaaatcagaaatctgaagaatcgtgccacgat 17932373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 435 - 476
Target Start/End: Original strand, 17921755 - 17921795
Alignment:
Q  435 tgattcaccttgaacaaagcactattaggattgagtctcttg 476  Q
    |||||||||||||| ||| |||||||||||||||||||||||    
T  17921755 tgattcaccttgaagaaa-cactattaggattgagtctcttg 17921795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 101 - 149
Target Start/End: Complemental strand, 19502550 - 19502502
Alignment:
Q  101 tgtgacagttaacttaaaatcagaattctggagaatcgtgccacgatgg 149  Q
    ||||| |||||||||||||||||  ||||| ||||||||| ||||||||    
T  19502550 tgtgatagttaacttaaaatcaggtttctgcagaatcgtggcacgatgg 19502502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 107 - 147
Target Start/End: Original strand, 27104521 - 27104561
Alignment:
Q  107 agttaacttaaaatcagaattctggagaatcgtgccacgat 147  Q
    |||||||||||||||||| ||||| ||||||||| ||||||    
T  27104521 agttaacttaaaatcagatttctgcagaatcgtggcacgat 27104561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 284; Significance: 1e-159; HSPs: 63)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 284; E-Value: 1e-159
Query Start/End: Original strand, 101 - 472
Target Start/End: Original strand, 5858197 - 5858567
Alignment:
Q  101 tgtgacagttaacttaaaatcagaattctggagaatcgtgccacgatggagaaacatcgcgccacgattgttgaagtaagattctgaggaagctactgga 200  Q
    ||||| ||||||||||||||||| | ||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||| ||||||||||    
T  5858197 tgtgagagttaacttaaaatcaggaatctggagaatcgtgccacgatggagaagcatcgcgccacgattgttgaagcaagattctgagggagctactgga 5858296  T
Q  201 aatttcgtgccacgatgaagccgcatcgtgccacgatggcatcgctgaagataaaaataaaacgtattttcagcatagatttgtttcagttttttaaggg 300  Q
    |||||||||||||||||   |||||||||||||||||||   |||| |||||||||  |||||||||||||||  |||||||||||||||||||||||||    
T  5858297 aatttcgtgccacgatggccccgcatcgtgccacgatggtcgcgctaaagataaaataaaaacgtattttcagt-tagatttgtttcagttttttaaggg 5858395  T
Q  301 tttactttccactataaatataagccttatatcagatgataaagtgtgtagaaaaacagggtttagaaaccaacatacaaactagggtttatagagaatt 400  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5858396 tttactttccactataaatataagccttgtatcagatgataaagtgtgtagaaaaacagggtttagaaaccaacatacaaactagggtttatagagaatt 5858495  T
Q  401 tctcttggcaacaacactaaggttgggattgttctgattcaccttgaacaaagcactattaggattgagtct 472  Q
    ||||||||||||||||||| ||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  5858496 tctcttggcaacaacactagggttgggattgttttgattcaccttgaacaaaacactattaggattgagtct 5858567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 284; E-Value: 1e-159
Query Start/End: Original strand, 102 - 476
Target Start/End: Original strand, 54188160 - 54188534
Alignment:
Q  102 gtgacagttaacttaaaatcagaattctggagaatcgtgccacgatggagaaacatcgcgccacgattgttgaagtaagattctgaggaagctactggaa 201  Q
    |||| ||||||||||||||||||| |||| |||||||||||||||||||||| |||||||||||||||||||||| ||||| |||||||||||||||||     
T  54188160 gtgagagttaacttaaaatcagaaatctgaagaatcgtgccacgatggagaagcatcgcgccacgattgttgaagcaagatcctgaggaagctactggat 54188259  T
Q  202 atttcgtgccacgatgaagccgcatcgtgccacgatggcatcgctgaagataaaaataaaacgtattttcagcatagatttgtttcagttttttaagggt 301  Q
     |||||||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||    
T  54188260 ttttcgtgccacgatgaagccgcatcgtgccacgatggtcgcgctgaagataaaaataaaacgtattttcagt-tagatttgtttcagttttttaagggt 54188358  T
Q  302 ttactttccactataaatataagccttatatcagatgataaagtgtgtagaaaaacagggtttagaaaccaacatacaaactagggtttatagagaattt 401  Q
    ||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  54188359 ttactttccactataaatataagccttgtatcaggtgataaagtgtgtagaaaaacagggtttagaaaccaacatacaaactaaggtttatagagaattt 54188458  T
Q  402 ctcttggcaacaacactaaggttgggattg-ttctgattcaccttgaacaaagcactattaggattgagtctcttg 476  Q
    |||||||||||||||||| | ||||||||| || |||||||||||||||||||||||||||| |||||||||||||    
T  54188459 ctcttggcaacaacactaggtttgggattgtttttgattcaccttgaacaaagcactattagaattgagtctcttg 54188534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 269; E-Value: 1e-150
Query Start/End: Original strand, 101 - 476
Target Start/End: Original strand, 10896655 - 10897030
Alignment:
Q  101 tgtgacagttaacttaaaatcagaattctggagaatcgtgccacgatggagaaacatcgcgccacgattgttgaagtaagattctgaggaagctactgga 200  Q
    ||||| ||||||||||||||||||| | ||||| ||||||||||||||||||| |||||||||||||||| ||||| | | |||  ||||||||||||||    
T  10896655 tgtgagagttaacttaaaatcagaaatatggagtatcgtgccacgatggagaagcatcgcgccacgattgctgaagcatggttcctaggaagctactgga 10896754  T
Q  201 aatttcgtgccacgatgaagccgcatcgtgccacgatggcatcgctgaagataaaaataaaacgtatttt-cagcatagatttgtttcagttttttaagg 299  Q
    |||||||||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||||| |||  ||||||||||||||||||||||||    
T  10896755 aatttcgtgccacgatgaagccgcatcgtgccacgatggtcgcgctgaagataaaaataaaacgtatttttcagt-tagatttgtttcagttttttaagg 10896853  T
Q  300 gtttactttccactataaatataagccttatatcagatgataaagtgtgtagaaaaacagggtttagaaaccaacatacaaactagggtttatagagaat 399  Q
    ||||||||||||||||||| | ||| ||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  10896854 gtttactttccactataaagacaagtcttgtatcagatgataaagtgtgtagaaaaatagggtttagaaaccaacatacaaactagggtttatagagaat 10896953  T
Q  400 ttctcttggcaacaacactaaggttgggattgttctgattcaccttgaacaaagcactattaggattgagtctcttg 476  Q
    |||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||| |||||||    
T  10896954 ttctcttggcaacaacactagggttgggattgttttgattcaccttgaacaaagcactattaggattgattctcttg 10897030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 263; E-Value: 1e-146
Query Start/End: Original strand, 107 - 476
Target Start/End: Complemental strand, 29914478 - 29914110
Alignment:
Q  107 agttaacttaaaatcagaattctggagaatcgtgccacgatggagaaacatcgcgccacgattgttgaagtaagattctgaggaagctactggaaatttc 206  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||   |||||||||||||||||||    
T  29914478 agttaacttaaaatcagaaatctggagaatcgtgccacgatggagaagcatcgcgccacgattgttgaagcaagattcctgggaagctactggaaatttc 29914379  T
Q  207 gtgccacgatgaagccgcatcgtgccacgatggcatcgctgaagataaaaataaaacgtattttcagcatagatttgtttcagttttttaagggtttact 306  Q
    |||||||||||   |||||||||||||||||||   |  ||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  29914378 gtgccacgatggctccgcatcgtgccacgatggtcgcattgaagataaaaataaaacgtattttcagt-tagatttgtttcagttttttaagggtttact 29914280  T
Q  307 ttccactataaatataagccttatatcagatgataaa-gtgtgtagaaaaacagggtttagaaaccaacatacaaactagggtttatagagaatttctct 405  Q
    |||||||||||||| | ||||| |||||||||||||| ||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  29914279 ttccactataaataca-gccttgtatcagatgataaaagtgtgtagaaaaacagggtttagaagccaacattcaaactagggtttatagagaatttctct 29914181  T
Q  406 tggcaacaacactaaggttgggattgttctgattcaccttgaacaaagcactattaggattgagtctcttg 476  Q
    |||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  29914180 tggcaacaacactagggttgggattgttttgattcaccttgaacaaagcactattaggattgagtctcttg 29914110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 258; E-Value: 1e-143
Query Start/End: Original strand, 101 - 476
Target Start/End: Original strand, 16461853 - 16462228
Alignment:
Q  101 tgtgacagttaacttaaaatcagaattctggagaatcgtgccacgatggagaaacatcgcgccacgattgttgaagtaagattctgaggaagctactgga 200  Q
    ||||| ||||||||||||||||||| ||||||| ||||||||||||||||||| |||||||||||||||||||||| |||||||   |||| ||||||||    
T  16461853 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgattgttgaagcaagattcctgggaaactactgga 16461952  T
Q  201 aatttcgtgccacgatgaagccgcatcgtgccacgatggcatcgctgaagat-aaaaataaaacgtattttcagcatagatttgtttcagttttttaagg 299  Q
    ||  |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||  ||||||||||||||||||||||||    
T  16461953 aaaatcgtgccacgatgaagccgcatcgtgccacgatggcatcgctgaagataaaaaataaaacgtattttcag-ttagatttgtttcagttttttaagg 16462051  T
Q  300 gtttactttccactataaatataagccttatatcagatgat-aaagtgtgtagaaaaacagggtttagaaaccaacatacaaactagggtttatagagaa 398  Q
    |||||||||||||||||||||  |||||| ||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||    
T  16462052 gtttactttccactataaata-cagccttgtatcagatgataaaagtgtgtagaaaaacaaggtttagaaaccaacatacaaactagggtttacagagaa 16462150  T
Q  399 tttctcttggcaacaacactaaggttgggattgttctgattcaccttgaacaaagcactattaggattgagtctcttg 476  Q
    |||||||| ||||||||  || ||||||||||||| |||||||||||||||||| |||||||||||||||||||||||    
T  16462151 tttctcttagcaacaactatagggttgggattgttttgattcaccttgaacaaaacactattaggattgagtctcttg 16462228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 248; E-Value: 1e-137
Query Start/End: Original strand, 117 - 476
Target Start/End: Complemental strand, 10613293 - 10612935
Alignment:
Q  117 aaatcagaattctggagaatcgtgccacgatggagaaacatcgcgccacgattgttgaagtaagattctgaggaagctactggaaatttcgtgccacgat 216  Q
    ||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||| |||||||||    
T  10613293 aaatcagaaatctggagaatcgtgccacgatggagaaacatcgcaccacgattgttgaagcaagattctgaggaagctactggaaatttcatgccacgat 10613194  T
Q  217 gaagccgcatcgtgccacgatggcatcgctgaagataaaaataaaacgtattttcagcatagatttgtttcagttttttaagggtttactttccactata 316  Q
    |   |  ||||||||||||||||   | |||||||||    ||||||||||||||||  ||||||||||||||||||||||| |||||||||||||||||    
T  10613193 ggcccgacatcgtgccacgatggacgcactgaagatatttttaaaacgtattttcagt-tagatttgtttcagttttttaagtgtttactttccactata 10613095  T
Q  317 aatataagccttatatcagatgataaagtgtgtagaaaaacagggtttagaaaccaacatacaaactagggtttatagagaatttctcttggcaacaaca 416  Q
    |||||||||||| ||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10613094 aatataagccttgtatcatatgataaagtgtgtagaaaaatagggtttagaaaccaacatacaaactagggtttatagagaatttctcttggcaacaaca 10612995  T
Q  417 ctaaggttgggattgttctgattcaccttgaacaaagcactattaggattgagtctcttg 476  Q
    ||| ||||||||||||| ||||||||||||||||||||||||||| |||||||| |||||    
T  10612994 ctagggttgggattgttttgattcaccttgaacaaagcactattaagattgagtttcttg 10612935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 101 - 476
Target Start/End: Complemental strand, 47878681 - 47878328
Alignment:
Q  101 tgtgacagttaacttaaaatcagaattctggagaatcgtgccacgatggagaaacatcgcgccacgattgttgaagtaagattctgaggaagctactgga 200  Q
    ||||| ||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||   |||||||||||||    
T  47878681 tgtgagagttaacttaaaatcagaaatctggagaatcgtgccacgatggagaagcatcgcgccacgattgttgaagcaagattcctgggaagctactgga 47878582  T
Q  201 aatttcgtgccacgatgaagccgcatcgtgccacgatggcatcgctgaagataaaaataaaacgtattttcagcatagatttgtttcagttttttaaggg 300  Q
    |||||||                     |||||||||||   |||||||||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  47878581 aatttcg---------------------tgccacgatggtcgcgctgaagataaaaataaaacgtattttcagt-tagatttgtttcagttttttaaggg 47878504  T
Q  301 tttactttccactataaatataagccttatatcagatgataaagtgtgtagaaaaacagggtttagaaaccaacatacaaactagggtttatagagaatt 400  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47878503 tttactttccactataaatataagccttgtatcagatgataaagtgtgtagaaaaacagggtttagaaaccaacatacaaactagggtttatagagaatt 47878404  T
Q  401 tctcttggcaacaacactaaggttgggattgttctgattcaccttgaacaaagcactattaggattgagtctcttg 476  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  47878403 tctcttggcaacaacactagggttgggattgttttgattcaccttgaacaaagcactattaggattgagtctcttg 47878328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 101 - 476
Target Start/End: Complemental strand, 10208530 - 10208157
Alignment:
Q  101 tgtgacagttaacttaaaatcagaattctggagaatcgtgccacgatggagaaacatcgcgccacgattgttgaagtaagatt-ctgaggaagctactgg 199  Q
    ||||| ||||||||||||||||||| ||||||| ||||||||||||||||||| |||||||||||||| ||||||| |||||| ||| |||||  |||||    
T  10208530 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagatttctg-ggaagacactgg 10208432  T
Q  200 aaatttcgtgccacgatgaagccgcatcgtgccacgatggcatcgctgaagataaaaataaaacgtatttt-cagcatagatttgtttcagttttttaag 298  Q
    ||||||||||||||||||||| | ||||| ||||||||||   |||||||||||||||||||||||||||| |||  ||||||||||| |||||||||||    
T  10208431 aaatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtatttttcagt-tagatttgttttagttttttaag 10208333  T
Q  299 ggtttactttccactataaatataagccttatatcagatgataaa-gtgtgtagaaaaacagggtttagaaaccaacatacaaactagggtttatagaga 397  Q
    |||||||||||||||||||||| | ||||| |||||||||||||| ||||||||||||||| ||||||||  |||||| |||||||||||||||||||||    
T  10208332 ggtttactttccactataaataca-gccttgtatcagatgataaaagtgtgtagaaaaacaaggtttaga--ccaacaaacaaactagggtttatagaga 10208236  T
Q  398 atttctcttggcaacaacactaaggttgggattgttctgattcaccttgaacaaagcactattaggattgagtctcttg 476  Q
    || ||||||||||||||| ||| ||||||||||||| |||||||||||||||||| |||||||| ||||||||||||||    
T  10208235 atctctcttggcaacaactctagggttgggattgttttgattcaccttgaacaaaacactattacgattgagtctcttg 10208157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 109 - 476
Target Start/End: Complemental strand, 10201476 - 10201111
Alignment:
Q  109 ttaacttaaaatcagaattctggagaatcgtgccacgatggagaaacatcgcgccacgattgttgaagtaagattctgaggaagctactggaaatttcgt 208  Q
    ||||||||||||||||| ||||||| ||||| ||||||||||||| |||||||||||||| ||||||| |||||||   |||||  ||||||||||||||    
T  10201476 ttaacttaaaatcagaaatctggagtatcgttccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactggaaatttcgt 10201377  T
Q  209 gccacgatgaagccgcatcgtgccacgatggcatcgctgaagataaaaataaaacgta-ttttcagcatagatttgtttcagttttttaagggtttactt 307  Q
    ||||| |||||| | ||||| ||||||||||   |||||||||||||||||||||||| |||||||  ||||||||||||||||||||||||||||||||    
T  10201376 gccacaatgaagactcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtatttttcag-ttagatttgtttcagttttttaagggtttactt 10201278  T
Q  308 tccactataaatataagccttatatcagatgat-aaagtgtgtagaaaaacagggtttagaaaccaacatacaaactagggtttatagagaatttctctt 406  Q
    |||||||||||||  |||||| ||||||||||| |||||||||||||||||| |||||||  ||||||| ||||||||||||||||||||||| ||||||    
T  10201277 tccactataaata-cagccttgtatcagatgataaaagtgtgtagaaaaacaaggtttag--accaacaaacaaactagggtttatagagaatctctctt 10201181  T
Q  407 ggcaacaacactaaggttgggattgttctgattcaccttgaacaaagcactattaggattgagtctcttg 476  Q
    ||||||||| ||| ||||||||||||| |||||||||||||||||| |||||||||||||||||||||||    
T  10201180 ggcaacaactctagggttgggattgttttgattcaccttgaacaaaacactattaggattgagtctcttg 10201111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 101 - 476
Target Start/End: Complemental strand, 10100621 - 10100248
Alignment:
Q  101 tgtgacagttaacttaaaatcagaattctggagaatcgtgccacgatggagaaacatcgcgccacgattgttgaagtaagatt-ctgaggaagctactgg 199  Q
    ||||| ||||||||||||||||||| ||| ||| ||||||||||||||||||| |||||||||||||| ||||||| |||||| ||| |||||  |||||    
T  10100621 tgtgagagttaacttaaaatcagaaatctagagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagatttctg-ggaagacactgg 10100523  T
Q  200 aaatttcgtgccacgatgaagccgcatcgtgccacgatggcatcgctgaagataaaaataaaacgtatttt-cagcatagatttgtttcagttttttaag 298  Q
    ||||||||||||||||||||| | ||||| |||||||||    |||||||||||||||||||||||||||| |||  |||||||||||||||||||||||    
T  10100522 aaatttcgtgccacgatgaagactcatcgcgccacgatgatcgcgctgaagataaaaataaaacgtatttttcagt-tagatttgtttcagttttttaag 10100424  T
Q  299 ggtttactttccactataaatataagccttatatcagatgataaa-gtgtgtagaaaaacagggtttagaaaccaacatacaaactagggtttatagaga 397  Q
    |||||||||||||| |||||| | |||||| |||||||||||||| ||||||||||||||| ||||||||  |||||| |||||||||||||||||||||    
T  10100423 ggtttactttccacgataaat-tcagccttgtatcagatgataaaagtgtgtagaaaaacaaggtttaga--ccaacaaacaaactagggtttatagaga 10100327  T
Q  398 atttctcttggcaacaacactaaggttgggattgttctgattcaccttgaacaaagcactattaggattgagtctcttg 476  Q
    || ||||||||||||||| ||| ||||||||||||| |||||||||||||||||| |||||||||||||||||||||||    
T  10100326 atctctcttggcaacaactctagggttgggattgttttgattcaccttgaacaaaacactattaggattgagtctcttg 10100248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 101 - 476
Target Start/End: Complemental strand, 10094598 - 10094231
Alignment:
Q  101 tgtgacagttaacttaaaatcagaattctggagaatcgtgccacgatggagaaacatcgcgccacgattgttgaagtaagattctgaggaagctactgga 200  Q
    ||||| ||||||||||||||||||| ||||||| ||||| ||||||||||||| ||||||| |||||| ||||||| |||||||   |||||  ||||||    
T  10094598 tgtgagagttaacttaaaatcagaaatctggagtatcgttccacgatggagaagcatcgcgtcacgatggttgaagcaagattcctgggaagacactgga 10094499  T
Q  201 aatttcgtgccacgatgaagccgcatcgtgccacgatggcatcgctgaagataaaaataaaacgtatttt-cagcatagatttgtttcagttttttaagg 299  Q
    |||||||||||||||||||| | ||||||||||||||||  |||||    |||||||||||||||||||| |||  ||||||||||||||||||||||||    
T  10094498 aatttcgtgccacgatgaagactcatcgtgccacgatgg--tcgct----ataaaaataaaacgtatttttcagt-tagatttgtttcagttttttaagg 10094406  T
Q  300 gtttactttccactataaatataagccttatatcagatgataaa-gtgtgtagaaaaacagggtttagaaaccaacatacaaactagggtttatagagaa 398  Q
    ||||||||||||||||||||| | ||||| |||||||||||||| ||||||||||||||| ||||||||  |||||| ||||||||||||||||||||||    
T  10094405 gtttactttccactataaataca-gccttgtatcagatgataaaagtgtgtagaaaaacaaggtttaga--ccaacaaacaaactagggtttatagagaa 10094309  T
Q  399 tttctcttggcaacaacactaaggttgggattgttctgattcaccttgaacaaagcactattaggattgagtctcttg 476  Q
    | ||||||||||||||| ||| ||||||||||||| |||||||||||||||||| |||||||||||||||||||||||    
T  10094308 tctctcttggcaacaactctagggttgggattgttttgattcaccttgaacaaaacactattaggattgagtctcttg 10094231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 226 - 476
Target Start/End: Original strand, 54193001 - 54193251
Alignment:
Q  226 tcgtgccacgatggcatcgctgaagataaaaataaaacgtattttcagcatagatttgtttcagttttttaagggtttactttccactataaatataagc 325  Q
    |||||||| |||||   |||||||||||||||||||||||||||||||  |||||||||||||||||||||||||| |||||||||||||||||||||||    
T  54193001 tcgtgccatgatggtcgcgctgaagataaaaataaaacgtattttcagt-tagatttgtttcagttttttaagggtgtactttccactataaatataagc 54193099  T
Q  326 cttatatcagatgataaagtgtgtagaaaaacagggtttagaaaccaacatacaaactagggtttatagagaatttctcttggcaacaacactaaggttg 425  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  54193100 cttgtatcagatgataaagtgtgtagaaaaacagggtttagaaaccaacatacaaactagggtttatagagaatttctcttggcaacaacactagggttg 54193199  T
Q  426 ggattg-ttctgattcaccttgaacaaagcactattaggattgagtctcttg 476  Q
    |||||| || ||||||||||||||||||||||||||||||||||||||||||    
T  54193200 ggattgtttttgattcaccttgaacaaagcactattaggattgagtctcttg 54193251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 101 - 476
Target Start/End: Complemental strand, 10595541 - 10595191
Alignment:
Q  101 tgtgacagttaacttaaaatcagaattctggagaatcgtgccacgatggagaaacatcgcgccacgattgttgaagtaagattctgaggaagctactgga 200  Q
    ||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||    
T  10595541 tgtgagagttaacttaaaatcagaaatctggagaatcgtgccacgatggagaaacattgcgccacgattgttgaagcaagattctgaggaagctactgga 10595442  T
Q  201 aatttcgtgccacgatgaagccgcatcgtgccacgatggcatcgctgaagataaaaataaaacgtattttcagcatagatttgtttcagttttttaaggg 300  Q
    |||||||                     |||||||||||   |||||||||||    ||||||||||||||||  |||||||||||||||||||||||||    
T  10595441 aatttcg---------------------tgccacgatggaggcgctgaagatatttttaaaacgtattttcagt-tagatttgtttcagttttttaaggg 10595364  T
Q  301 tttactttccactataaatataagccttatatcagatgataaagtgtgtagaaaaacagggtttagaaaccaacatacaaactagggtttatagagaatt 400  Q
    |||||||||||||||||||||||| ||| ||||||||||||  ||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||    
T  10595363 tttactttccactataaatataagtcttgtatcagatgata--gtgtgtagaaaaaaagg-tttagaaaccaacatacaaactagggtttatagagaatt 10595267  T
Q  401 tctcttggcaacaacactaaggttgggattgttctgattcaccttgaacaaagcactattaggattgagtctcttg 476  Q
    | ||||||||||||||||| |||| |||||||| ||||||||| |||||||||||||||||||||| |||||||||    
T  10595266 tatcttggcaacaacactagggtttggattgttttgattcaccatgaacaaagcactattaggattaagtctcttg 10595191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 155 - 476
Target Start/End: Original strand, 6303017 - 6303335
Alignment:
Q  155 catcgcgccacgattgttgaagtaagattctgaggaagctactggaaatttcgtgccacgatgaagccgcatcgtgccacgatggcatcgctgaagataa 254  Q
    |||||||||||||| ||||||| |||||||   |||||||||||||||  ||||||||||||||||| |  ||||||||||||||   ||||||||||||    
T  6303017 catcgcgccacgatggttgaagcaagattcctgggaagctactggaaaaatcgtgccacgatgaagcagggtcgtgccacgatggtcgcgctgaagataa 6303116  T
Q  255 aaataaaacgtattttcagcatagatttgtttcagttttttaagggtttactttccactataaatataagccttatatcagatgataaa-gtgtgtagaa 353  Q
    |||||||||||||||||||  |||||||||||||||||| |||||||||||||||||||||||||| | ||||| |||||||||||||| ||||||||||    
T  6303117 aaataaaacgtattttcagt-tagatttgtttcagttttataagggtttactttccactataaataca-gccttgtatcagatgataaaagtgtgtagaa 6303214  T
Q  354 aaacagggtttagaaaccaacatacaaactagggtttatagagaatttctcttggcaacaacactaaggttgggattgttctgattcaccttgaacaaag 453  Q
    ||||| ||||||||  |||||| ||||||||||||||||||||||| ||||||||||||||| ||| ||||||||||||| ||||||||||||||||||     
T  6303215 aaacaaggtttaga--ccaacaaacaaactagggtttatagagaatctctcttggcaacaactctagggttgggattgttttgattcaccttgaacaaaa 6303312  T
Q  454 cactattaggattgagtctcttg 476  Q
    |||||||||||||||||||||||    
T  6303313 cactattaggattgagtctcttg 6303335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 156 - 476
Target Start/End: Original strand, 27543980 - 27544298
Alignment:
Q  156 atcgcgccacgattgttgaagtaagattctgaggaagctactggaaatttcgtgccacgatgaagccgcatcgtgccacgatggcatcgctgaagataaa 255  Q
    |||| |||||||| ||||||| |||||||   |||||||||||||||  ||||||||||||||||| |  ||||||||||||||   |||||||||||||    
T  27543980 atcgtgccacgatggttgaagcaagattcctgggaagctactggaaaaatcgtgccacgatgaagcagggtcgtgccacgatggtcgcgctgaagataaa 27544079  T
Q  256 aataaaacgtattttcagcatagatttgtttcagttttttaagggtttactttccactataaatataagccttatatcagatgataaa-gtgtgtagaaa 354  Q
    |||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||| | ||||| |||||||||||||| |||||||||||    
T  27544080 aataaaacgtattttcagta-agatttgtttcagttttttaagggtttactttccactataaataca-gccttgtatcagatgataaaagtgtgtagaaa 27544177  T
Q  355 aa-cagggtttagaaaccaacatacaaactagggtttatagagaatttctcttggcaacaacactaaggttgggattgttctgattcaccttgaacaaag 453  Q
    || || ||||||||  |||||| ||||||||||||||||||||||| ||||||||||||||| ||| ||||||||||||| ||||||||||||||||||     
T  27544178 aaacaaggtttaga--ccaacaaacaaactagggtttatagagaatctctcttggcaacaactctagggttgggattgttttgattcaccttgaacaaaa 27544275  T
Q  454 cactattaggattgagtctcttg 476  Q
    |||||||||||||||||||||||    
T  27544276 cactattaggattgagtctcttg 27544298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 101 - 476
Target Start/End: Complemental strand, 47883412 - 47883039
Alignment:
Q  101 tgtgacagttaacttaaaatcagaattctggagaatcgtgccacgatggagaaacatcgcgccacgattgttgaagtaagattctgagg-aagctactgg 199  Q
    ||||| ||||||||||||||||| | | ||||||| ||||||||||||||||| || || | |||||||||||||  ||||| |||| | |||  |||||    
T  47883412 tgtgagagttaacttaaaatcaggaatttggagaaacgtgccacgatggagaagcaacgtgtcacgattgttgaaacaagatcctgatgcaagtcactgg 47883313  T
Q  200 aaatttcgtgccacgatgaagccgcatcgtgccacgatggcatcgctgaagataaaaata-aaacgtattttcagcatagatttgtttcagttttttaag 298  Q
    ||| |||||||||| ||| |   | | |||| |||||||| | || |||||| || || | ||||||||||||||   ||||||||| || | |||||||    
T  47883312 aaaattcgtgccacaatggaattgtaacgtggcacgatggta-cgttgaagaaaataacataaacgtattttcagtgaagatttgttcca-tattttaag 47883215  T
Q  299 ggtttactttccactataaatataagccttatatcagatgataaagtgtgtagaaaaacagggtttagaaaccaacatacaaactagggtttatagagaa 398  Q
    |||| ||||||||||||||||||||||||| |||||||||||||||||||||||||| |||| ||||||| |||||||||||||||||||||||||| ||    
T  47883214 ggtt-actttccactataaatataagccttgtatcagatgataaagtgtgtagaaaa-caggatttagaagccaacatacaaactagggtttatagataa 47883117  T
Q  399 tttctcttggcaacaacactaaggttgggattgttctgattcaccttgaacaaagcactattaggattgagtctcttg 476  Q
    ||||||||||||||||||||| ||||||||||||| |||||||||||||||||| |||||||||||||||||||||||    
T  47883116 tttctcttggcaacaacactatggttgggattgttttgattcaccttgaacaaaacactattaggattgagtctcttg 47883039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 101 - 476
Target Start/End: Original strand, 11079169 - 11079542
Alignment:
Q  101 tgtgacagttaacttaaaatcagaattctggagaatcgtgccacgatggagaaacatcgcgccacgattgttgaagtaagattctgagg-aagctactgg 199  Q
    ||||| ||||||||||||||||| | ||||||||| ||||||||||||||||| || || |||||||||||| ||  ||||| |||| | |||  |||||    
T  11079169 tgtgagagttaacttaaaatcagtaatctggagaaacgtgccacgatggagaagcaacgtgccacgattgtttaaaaaagatcctgaagcaagtcactgg 11079268  T
Q  200 aaatttcgtgccacgatgaagccgcatcgtgccacgatggcatcgctgaagataaaaata-aaacgtattttcagcatagatttgtttcagttttttaag 298  Q
    ||| |||||||||||||| |  || | |||| |||||||| | | ||||||  || || | ||||||||||||||   |||||| ||  | | |||||||    
T  11079269 aaaattcgtgccacgatggaatcgtaacgtggcacgatggta-cactgaaggaaataacataaacgtattttcagtgaagatttattcta-tattttaag 11079366  T
Q  299 ggtttactttccactataaatataagccttatatcagatgataaagtgtgtagaaaaacagggtttagaaaccaacatacaaactagggtttatagagaa 398  Q
    |||| ||||||||||||||||||||||||| ||||||||||||||||||||| | |  |||||||||||| |||||||||||||||||||||||||||||    
T  11079367 ggtt-actttccactataaatataagccttgtatcagatgataaagtgtgtatatag-cagggtttagaagccaacatacaaactagggtttatagagaa 11079464  T
Q  399 tttctcttggcaacaacactaaggttgggattgttctgattcaccttgaacaaagcactattaggattgagtctcttg 476  Q
    ||||||||||||||||||||| ||||||||||||| ||||||| |||||||||| |||||| ||||||||||||||||    
T  11079465 tttctcttggcaacaacactagggttgggattgttttgattcatcttgaacaaaacactatcaggattgagtctcttg 11079542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 143; E-Value: 6e-75
Query Start/End: Original strand, 101 - 476
Target Start/End: Original strand, 4535262 - 4535639
Alignment:
Q  101 tgtgacagttaacttaaaatcagaattctggagaatcgtgccacgatggagaaacatcgcgccacgattgttgaagtaagattctgaggaagctactgga 200  Q
    ||||| ||||||||||||||||  | ||||||||||| |  |||||||||||| || || |||||||||||||||  |||||||||||      | ||||    
T  4535262 tgtgagagttaacttaaaatcatgaatctggagaatcatatcacgatggagaagcaacgtgccacgattgttgaaacaagattctgagatcttcattgga 4535361  T
Q  201 aatttcgtgccacgatgaagccgcatcgtgccacgatggcatcgctgaagataaaaataaaacgtattttcagcatagatttgtttcagtttt--ttaag 298  Q
    ||  | ||||||| ||  |  || | |||| |||||||  |    ||| |||||||| |||||||||||||||   |||||||||||| ||||  ||||     
T  4535362 aaaattgtgccacaattgaatcgtaacgtggcacgatgatacgattgaggataaaaacaaaacgtattttcagtgaagatttgtttcaattttgtttaaa 4535461  T
Q  299 ggtttactttccactataaatataagccttatatcagatgataaagtgtgtagaaaaacagggtttagaaaccaacatacaaactagggtttatagagaa 398  Q
    || |||||||||||||||| |||||| ||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||    
T  4535462 gggttactttccactataattataagtcttgtatcagatgataaagtgtgtagaaaaacagggtttagaagccaacatacaaactagggttcatagagaa 4535561  T
Q  399 tttctcttggcaacaacactaaggttgggattgttctgattcaccttgaacaaagcactattaggattgagtctcttg 476  Q
    ||||||||||||||||||||| ||||||| ||||| |||||||| ||||||||| |||  ||||||||||||||||||    
T  4535562 tttctcttggcaacaacactagggttgggtttgttttgattcactttgaacaaaacaccgttaggattgagtctcttg 4535639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 101 - 309
Target Start/End: Complemental strand, 22627695 - 22627488
Alignment:
Q  101 tgtgacagttaacttaaaatcagaattctggagaatcgtgccacgatggagaaacatcgcgccacgattgttgaagtaagattctgaggaagctactgga 200  Q
    ||||| ||||||||||||||||||| ||||||| ||||||||||||||||||| |||| ||||||||||||||||| |||||||||||||||||||||||    
T  22627695 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatctcgccacgattgttgaagcaagattctgaggaagctactgga 22627596  T
Q  201 aatttcgtgccacgatgaagccgcatcgtgccacgatggcatcgctgaagataaaaataaaacgtattttcagcatagatttgtttcagttttttaaggg 300  Q
    ||  |||||||||||||||||||  ||||||||||||||   |||||||||||||||||||||||||||||||  ||||| |||||||||||||||||||    
T  22627595 aaaatcgtgccacgatgaagccgtgtcgtgccacgatggtcgcgctgaagataaaaataaaacgtattttcag-ttagatctgtttcagttttttaaggg 22627497  T
Q  301 tttactttc 309  Q
    |||||||||    
T  22627496 tttactttc 22627488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 138; E-Value: 6e-72
Query Start/End: Original strand, 260 - 476
Target Start/End: Complemental strand, 27762355 - 27762143
Alignment:
Q  260 aaacgtattttcagcatagatttgtttcagttttttaagggtttactttccactataaatataagccttatatcagatgataaagtgtgtagaaaaacag 359  Q
    ||||||||||||||   ||||||||| || | ||||||||||| |||||||||||||||||| || ||| |||||||||||||||||||||||||  |||    
T  27762355 aaacgtattttcagtgaagatttgttcca-tattttaagggtt-actttccactataaatattagtcttgtatcagatgataaagtgtgtagaaa--cag 27762260  T
Q  360 ggtttagaaaccaacatacaaactagggtttatagagaatttctcttggcaacaacactaaggttgggattgttctgattcaccttgaacaaagcactat 459  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| ||||||||||| |||||||||||||    
T  27762259 ggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaacactagggttgagattgttttgattcaccttaaacaaagcactat 27762160  T
Q  460 taggattgagtctcttg 476  Q
    |||||||||||||||||    
T  27762159 taggattgagtctcttg 27762143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 304 - 476
Target Start/End: Complemental strand, 22626312 - 22626141
Alignment:
Q  304 actttccactataaatataagccttatatcagatgataaagtgtgtagaaaaacagggtttagaaaccaacatacaaactagggtttatagagaatttct 403  Q
    ||||||||||||||||| | ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  22626312 actttccactataaataca-gccttgtatcagatgataaagtgtgtagaaaaacagggtttagaaaccaacatacaaactagggtttatggagaatttct 22626214  T
Q  404 cttggcaacaacactaaggttgggattgttctgattcaccttgaacaaagcactattaggattgagtctcttg 476  Q
    |||||||||||| ||| ||||||||||||| |||||||||||||||||| |||||||||||||||||||||||    
T  22626213 cttggcaacaactctagggttgggattgttttgattcaccttgaacaaaacactattaggattgagtctcttg 22626141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 133; E-Value: 6e-69
Query Start/End: Original strand, 292 - 476
Target Start/End: Complemental strand, 10949598 - 10949417
Alignment:
Q  292 ttttaagggtttactttccactataaatataagccttatatcagatgataaagtgtgtagaaaaacagggtttagaaaccaacatacaaactagggttta 391  Q
    ||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||    
T  10949598 ttttaagggtt-actttccactataaatataagccttgtatcagatgataaagtgtgtagaaaa-cagggtttagaagccaacatacaaactagggttta 10949501  T
Q  392 tagagaatttctcttggcaacaacactaaggttgggattgttctgattcaccttgaacaaagcactattaggattgagtctcttg 476  Q
    |||||||||||||||||||||||| ||| ||||  ||||||| ||||||||||||||||||| ||||||||||||||||||||||    
T  10949500 tagagaatttctcttggcaacaactctagggtt-cgattgttttgattcaccttgaacaaagtactattaggattgagtctcttg 10949417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 126; E-Value: 9e-65
Query Start/End: Original strand, 302 - 476
Target Start/End: Complemental strand, 20031645 - 20031475
Alignment:
Q  302 ttactttccactataaatataagccttatatcagatgataaagtgtgtagaaaaacagggtttagaaaccaacatacaaactagggtttatagagaattt 401  Q
    |||||||| |||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||| ||     |||||||||| ||||||||||||||    
T  20031645 ttactttcgactataaatataagtcttgtatcagatgataaagtgtgtagaaaaacagggtttagaagcc----gacaaactaggctttatagagaattt 20031550  T
Q  402 ctcttggcaacaacactaaggttgggattgttctgattcaccttgaacaaagcactattaggattgagtctcttg 476  Q
    |||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  20031549 ctcttggcaacaacactagggttgggattgttttgattcaccttgaacaaagcactattaggattgagtctcttg 20031475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 264 - 476
Target Start/End: Original strand, 38002684 - 38002894
Alignment:
Q  264 gtattttcagcatagatttgtttcagttttttaagggtttactttccactataaatataa-gccttatatcagatgataaagtgtgtagaaaaacagggt 362  Q
    ||||||||||   |||||||||||| | ||||||||||| |||||||||||||||||||| ||||| ||||| |||||| | ||||||||||| |||| |    
T  38002684 gtattttcagtgaagatttgtttca-tattttaagggtt-actttccactataaatataaagccttgtatcaaatgatacactgtgtagaaaa-caggat 38002780  T
Q  363 ttagaaaccaacatacaaactagggtttatagagaatttctcttggcaacaacactaaggttgggattgttctgattcaccttgaacaaagcactattag 462  Q
    ||||||  ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||||||||||||||| ||| |||||    
T  38002781 ttagaagtcaacatacaaactagggtttatagagaatttctcttggcaacaacactagggttgagattgttttgattcaccttgaacaaaacaccattag 38002880  T
Q  463 gattgagtctcttg 476  Q
    | ||||||||||||    
T  38002881 gtttgagtctcttg 38002894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 107 - 273
Target Start/End: Complemental strand, 29963631 - 29963465
Alignment:
Q  107 agttaacttaaaatcagaattctggagaatcgtgccacgatggagaaacatcgcgccacgattgttgaagtaagattctgaggaagctactggaaatttc 206  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||   |||||||||||||||||||    
T  29963631 agttaacttaaaatcagaaatctggagaatcgtgccacgatggagaagcatcgcgccacgattgttgaagcaagattcctgggaagctactggaaatttc 29963532  T
Q  207 gtgccacgatgaagccgcatcgtgccacgatggcatcgctgaagataaaaataaaacgtattttcag 273  Q
    |||||||||||   |||||||||||||||||||   |  ||||||||||||||||||||||||||||    
T  29963531 gtgccacgatggctccgcatcgtgccacgatggtcgcattgaagataaaaataaaacgtattttcag 29963465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 127 - 409
Target Start/End: Complemental strand, 48390725 - 48390444
Alignment:
Q  127 tctggagaatcgtgccacgatggagaaacatcgcgccacgattgttgaagtaagattctg-aggaagctactggaaatttcgtgccacgatgaagccgca 225  Q
    |||||||||  ||| |||||||||||| || || ||||| |||||||||| ||||||||| ||||||  ||||||||  |||||| |||||| |  || |    
T  48390725 tctggagaaatgtgtcacgatggagaagcaacgtgccacaattgttgaagcaagattctggaggaagtcactggaaaaatcgtgctacgatggaatcgta 48390626  T
Q  226 tcgtgccacgatggcatcgctgaagataaaaata-aaacgtattttcagcatagatttgtttcagttttttaagggtttactttccactataaatataag 324  Q
     |||| |||||||| | || || ||  || |||| ||||||||||||||   ||||||||||||  |||| ||||||| |||||||||||||||||||||    
T  48390625 acgtggcacgatggta-cgatggaggaaataatagaaacgtattttcagtgaagatttgtttcaactttt-aagggtt-actttccactataaatataag 48390529  T
Q  325 ccttatatcagatgataaagtgtgtagaaaaacagggtttagaaaccaacatacaaactagggtttatagagaatttctcttggc 409  Q
    |||  ||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||    
T  48390528 cctcgtatcagatgataaagtgtgtagaaaaacagggtttagaagccgacatacaaactagggtttatagagaatttctcttggc 48390444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 101 - 336
Target Start/End: Complemental strand, 51727543 - 51727309
Alignment:
Q  101 tgtgacagttaacttaaaatcagaattctggagaatcgtgccacgatggagaaacatcgcgccacgattgttgaagtaagattct-gaggaagctactgg 199  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||| | ||| |||||||||||||||| || ||||| ||| || | |||||    
T  51727543 tgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatggagaagcttcgtgccacgattgttgaagcaaaattctggagcaatc-actgg 51727445  T
Q  200 aaatttcgtgccacgatgaagccgcatcgtgccacgatggcatcgctgaagataaaaataaaacgtattttcagcatagatttgtttcagttttttaagg 299  Q
    |||  ||||||||||||     || |||||||||||||||  |   ||||||||||||||||||||||||| |    |||||||||||||||||||||||    
T  51727444 aaaaatcgtgccacgatttgatcgaatcgtgccacgatggtgtgattgaagataaaaataaaacgtatttttattgaagatttgtttcagttttttaagg 51727345  T
Q  300 gtttactttccactataaatataagccttatatcaga 336  Q
    | ||||||| |||||||||||||  |||| |||||||    
T  51727344 gattacttt-cactataaatatagaccttgtatcaga 51727309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 353 - 466
Target Start/End: Original strand, 3329794 - 3329908
Alignment:
Q  353 aaaacagggtttagaaaccaacatacaaactagggtttatagagaatttctcttggcaa-caacactaaggttgggattgttctgattcaccttgaacaa 451  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||  ||||||| |||||||| |||| |||||||||||||||||    
T  3329794 aaaacagggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaataaacactagggttgggaatgttttgattcaccttgaacaa 3329893  T
Q  452 agcactattaggatt 466  Q
    |||||||||||||||    
T  3329894 agcactattaggatt 3329908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 101 - 336
Target Start/End: Complemental strand, 4308818 - 4308584
Alignment:
Q  101 tgtgacagttaacttaaaatcagaattctggagaatcgtgccacgatggagaaacatcgcgccacgattgttgaagtaagattct-gaggaagctactgg 199  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||| |||| | ||| |||||||||||||||| || ||||| ||| || | |||||    
T  4308818 tgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatgaagaagcttcgtgccacgattgttgaagcaaaattctagagcaatc-actgg 4308720  T
Q  200 aaatttcgtgccacgatgaagccgcatcgtgccacgatggcatcgctgaagataaaaataaaacgtattttcagcatagatttgtttcagttttttaagg 299  Q
    |||  ||||||||||||     || |||||||||||||||      ||||||||||||||||||||||||| |    |||||||||||||||||||||||    
T  4308719 aaaaatcgtgccacgattggatcgaatcgtgccacgatggtgcgattgaagataaaaataaaacgtatttttattgaagatttgtttcagttttttaagg 4308620  T
Q  300 gtttactttccactataaatataagccttatatcaga 336  Q
    | ||||||| |||||||||||||  |||| |||||||    
T  4308619 gattacttt-cactataaatatagaccttgtatcaga 4308584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 101 - 217
Target Start/End: Original strand, 54192897 - 54193013
Alignment:
Q  101 tgtgacagttaacttaaaatcagaattctggagaatcgtgccacgatggagaaacatcgcgccacgattgttgaagtaagattctgaggaagctactgga 200  Q
    ||||| ||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||| ||||| || ||||||||||||||    
T  54192897 tgtgagagttaacttaaaatcagaaatctggagaatcgtgccacgatggagaagcatcgcgccacgattgttgaagcaagatcctaaggaagctactgga 54192996  T
Q  201 aatttcgtgccacgatg 217  Q
      |||||||||| ||||    
T  54192997 tttttcgtgccatgatg 54193013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 101 - 336
Target Start/End: Complemental strand, 25690893 - 25690659
Alignment:
Q  101 tgtgacagttaacttaaaatcagaattctggagaatcgtgccacgatggagaaacatcgcgccacgattgttgaagtaagattct-gaggaagctactgg 199  Q
    ||||| ||||||||||||||||||||||||  ||||||||||||||||||||| | ||| |||||||||||||||| || ||||| ||| || | |||||    
T  25690893 tgtgagagttaacttaaaatcagaattctgatgaatcgtgccacgatggagaagcttcgtgccacgattgttgaagaaaaattctggagcaatc-actgg 25690795  T
Q  200 aaatttcgtgccacgatgaagccgcatcgtgccacgatggcatcgctgaagataaaaataaaacgtattttcagcatagatttgtttcagttttttaagg 299  Q
    |||  |||||||| |||     || || ||||||||||||      ||||||||||||||||||||||||| |    |||||||||||||||||||||||    
T  25690794 aaaaatcgtgccatgattggatcgaattgtgccacgatggtgcgattgaagataaaaataaaacgtatttttattgaagatttgtttcagttttttaagg 25690695  T
Q  300 gtttactttccactataaatataagccttatatcaga 336  Q
    | ||||||| |||||||||||||  |||| |||||||    
T  25690694 gattacttt-cactataaatatagaccttgtatcaga 25690659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 313 - 476
Target Start/End: Original strand, 16996737 - 16996900
Alignment:
Q  313 tataaatataagccttatatcagatgataaagtgtgtagaaaaacagggtttagaaaccaacatacaaactagggtttatagagaatttctcttggcaa- 411  Q
    ||||||||||| |||| |||||||| | |||||||  ||||| ||| ||||||||| |||||| |||||||||||||||||||||| ||||||||| ||     
T  16996737 tataaatataaaccttgtatcagataaaaaagtgttaagaaacacaaggtttagaagccaacaaacaaactagggtttatagagaa-ttctcttggtaat 16996835  T
Q  412 caacactaaggttgggattgttctgattcaccttgaacaaagcactattaggattgagtctcttg 476  Q
     ||||||| |||||| | |||| |||||||||| ||| ||| |||| ||||||||||||||||||    
T  16996836 aaacactagggttggaaatgttttgattcacctagaataaaacactgttaggattgagtctcttg 16996900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 101 - 336
Target Start/End: Complemental strand, 27101797 - 27101563
Alignment:
Q  101 tgtgacagttaacttaaaatcagaattctggagaatcgtgccacgatggagaaacatcgcgccacgattgttgaagtaagattct-gaggaagctactgg 199  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||   | | |||| ||||||||||| || ||||| ||  || | |||||    
T  27101797 tgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatggagaagttttgtgccatgattgttgaagcaaaattctggaacaatc-actgg 27101699  T
Q  200 aaatttcgtgccacgatgaagccgcatcgtgccacgatggcatcgctgaagataaaaataaaacgtattttcagcatagatttgtttcagttttttaagg 299  Q
    |||  ||||||||||||     || ||||||||| |||||      ||||||||||||||||||||||||| |    |||||||||||||||||||||||    
T  27101698 aaaaatcgtgccacgattggatcgaatcgtgccaagatggtgcgattgaagataaaaataaaacgtatttttattgaagatttgtttcagttttttaagg 27101599  T
Q  300 gtttactttccactataaatataagccttatatcaga 336  Q
    | ||||||| |||||||||||||  |||| |||||||    
T  27101598 gattacttt-cactataaatatagaccttgtatcaga 27101563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 311 - 476
Target Start/End: Original strand, 13893322 - 13893487
Alignment:
Q  311 actataaatataagccttatatcagatgataaagtgtgtagaaaaacagggtttagaaaccaacatacaaactagggtttatagagaatttctcttggca 410  Q
    ||||||||||||  | || ||||| |||| ||||||||||||||| || |||||||||  ||||||| |||||||||||||||||||| |||||||||||    
T  13893322 actataaatatagacattgtatcaaatgaaaaagtgtgtagaaaa-caaggtttagaagtcaacataaaaactagggtttatagagaa-ttctcttggca 13893419  T
Q  411 ac-aacactaaggttgggattg-ttctgattcaccttgaacaaagcactattaggattgagtctcttg 476  Q
    || ||||||| ||||||||||| || ||||||||||||||||||  ||  |||| |||||||||||||    
T  13893420 acaaacactagggttgggattgtttttgattcaccttgaacaaaataccgttagaattgagtctcttg 13893487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 101 - 322
Target Start/End: Complemental strand, 9605150 - 9604929
Alignment:
Q  101 tgtgacagttaacttaaaatcagaattctggagaatcgtgccacgatggagaaacatcgcgccacgattgttgaagtaagattct-gaggaagctactgg 199  Q
    ||||| ||||||||||||||||||||||||||||||||||| |||||||||||   ||| |||||||||||||||| || ||||| ||| || | |||||    
T  9605150 tgtgagagttaacttaaaatcagaattctggagaatcgtgctacgatggagaagtttcgtgccacgattgttgaagcaaaattctggagcaatc-actgg 9605052  T
Q  200 -aaatttcgtgccacga-tgaagccgcatcgtgccacgatggcatcgctgaagataaaaataaaacgtattttcagcatagatttgtttcagttttttaa 297  Q
     |||  ||||||||||| ||||  ||||||||| ||||||||      |||||||||||||||||| |||||| |    |||||||||| ||||||||||    
T  9605051 aaaaaatcgtgccacgactgaa-tcgcatcgtggcacgatggtgcgattgaagataaaaataaaacatatttttattgaagatttgttttagttttttaa 9604953  T
Q  298 gggtttactttccactataaatata 322  Q
    ||| ||||||| |||||||||||||    
T  9604952 gggattacttt-cactataaatata 9604929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 334 - 472
Target Start/End: Original strand, 7417953 - 7418085
Alignment:
Q  334 agatgataaagtgtgtagaaaaacagggtttagaaaccaacatacaaactagggtttatagagaatttctcttggcaacaacactaaggttgggattgtt 433  Q
    ||||||| | |||||||||||| | |||||||||| |||||||| ||||||||||||||| ||||||||||||||||| ||||||||     ||||||||    
T  7417953 agatgattatgtgtgtagaaaa-cggggtttagaagccaacataaaaactagggtttataaagaatttctcttggcaataacactaa-----ggattgtt 7418046  T
Q  434 ctgattcaccttgaacaaagcactattaggattgagtct 472  Q
     | |||||||||||||||| ||| |||| ||||||||||    
T  7418047 ttaattcaccttgaacaaaacaccattatgattgagtct 7418085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 101 - 322
Target Start/End: Complemental strand, 35918486 - 35918266
Alignment:
Q  101 tgtgacagttaacttaaaatcagaattctggagaatcgtgccacgatggagaaacatcgcgccacgattgttgaagtaagattct-gaggaagctactgg 199  Q
    ||||| ||||||||||||||||||||| ||||||||||||||||||||||||| | ||| |||||||||||||||| || ||||| ||| || | |||||    
T  35918486 tgtgagagttaacttaaaatcagaattatggagaatcgtgccacgatggagaagcttcgtgccacgattgttgaagcaaaattctggagtaatc-actgg 35918388  T
Q  200 aaatttcgtgccacgatgaagccgcatcgtgccacgatggcatcgctgaagataaaaataaaacgtattttcagcatagatttgtttcagttttttaagg 299  Q
    |||  ||||  ||||||     || || ||||||||||||      ||||||||||||||||||||||||| |    |||||||||| ||||||| ||||    
T  35918387 aaaaatcgtagcacgattggatcgaatagtgccacgatggtgcgattgaagataaaaataaaacgtatttttattgaagatttgttttagtttttaaagg 35918288  T
Q  300 gtttactttccactataaatata 322  Q
    | ||||||| |||||||||||||    
T  35918287 gattacttt-cactataaatata 35918266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 101 - 217
Target Start/End: Complemental strand, 20031882 - 20031764
Alignment:
Q  101 tgtgacagttaacttaaaatcagaattctggagaatcgtgccacgatggagaaa-catcgcgccacgattgttgaagtaagattctg-aggaagctactg 198  Q
    ||||| ||||||||||||||||||| ||||||||| |||||||||||||||||| ||  | |||||||||||||||| ||||||||| ||||||  ||||    
T  20031882 tgtgagagttaacttaaaatcagaaatctggagaaacgtgccacgatggagaaagcaatgtgccacgattgttgaagcaagattctgaaggaagtcactg 20031783  T
Q  199 gaaatttcgtgccacgatg 217  Q
    ||||  |||||||||||||    
T  20031782 gaaaaatcgtgccacgatg 20031764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 100 - 186
Target Start/End: Original strand, 43225826 - 43225912
Alignment:
Q  100 gtgtgacagttaacttaaaatcagaattctggagaatcgtgccacgatggagaaacatcgcgccacgattgttgaagtaagattctg 186  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||| | ||| || ||||||||||||| || ||||||    
T  43225826 gtgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatggagaagcttcgtgctacgattgttgaagcaaaattctg 43225912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 311 - 476
Target Start/End: Original strand, 26762894 - 26763063
Alignment:
Q  311 actataaatataagccttatatcagatgataa-----agtgtgtagaaaaacagggtttagaaaccaacatacaaactagggtttatagagaatttctct 405  Q
    ||||||||||||| |||| |||||||||| ||     || | ||||||||||||||||||||||| |||| |||||||||| |||||||||| ||||||     
T  26762894 actataaatataaaccttgtatcagatgaaaagaggtagggagtagaaaaacagggtttagaaacgaaca-acaaactaggatttatagaga-tttctcc 26762991  T
Q  406 tggcaacaa-cactaaggttgggattgttctgattcaccttgaacaaagcactattaggattgagtctcttg 476  Q
    ||| ||||| ||||| ||||| ||||| | |||||||||||| ||||| || |||||||||  |||||||||    
T  26762992 tgggaacaaacactagggttgtgattgatttgattcaccttggacaaaacattattaggataaagtctcttg 26763063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 101 - 216
Target Start/End: Complemental strand, 10949810 - 10949694
Alignment:
Q  101 tgtgacagttaacttaaaatcagaattctggagaatcgtgccacgatggagaaacatcgcgccacgattgttgaagtaagattctg-aggaagctactgg 199  Q
    ||||| ||||||||||||||||| | ||||||||| ||||||||||||||||| || || |||||||||||||||  ||||| ||| || |||  |||||    
T  10949810 tgtgagagttaacttaaaatcaggaatctggagaaacgtgccacgatggagaagcaacgtgccacgattgttgaaacaagatcctgaagcaagtcactgg 10949711  T
Q  200 aaatttcgtgccacgat 216  Q
    ||| |||||||||||||    
T  10949710 aaaattcgtgccacgat 10949694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 102 - 186
Target Start/End: Original strand, 29956218 - 29956302
Alignment:
Q  102 gtgacagttaacttaaaatcagaattctggagaatcgtgccacgatggagaaacatcgcgccacgattgttgaagtaagattctg 186  Q
    |||| |||||||||||||||||||||||||| ||||||| |||||||||||| | ||| |||||||||||||||| || ||||||    
T  29956218 gtgagagttaacttaaaatcagaattctggataatcgtgtcacgatggagaagcttcgtgccacgattgttgaagcaaaattctg 29956302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 102 - 186
Target Start/End: Original strand, 30005373 - 30005457
Alignment:
Q  102 gtgacagttaacttaaaatcagaattctggagaatcgtgccacgatggagaaacatcgcgccacgattgttgaagtaagattctg 186  Q
    |||| |||||||||||||||||||||||||| ||||||| |||||||||||| | ||| |||||||||||||||| || ||||||    
T  30005373 gtgagagttaacttaaaatcagaattctggataatcgtgtcacgatggagaagcttcgtgccacgattgttgaagcaaaattctg 30005457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 101 - 166
Target Start/End: Original strand, 10901398 - 10901463
Alignment:
Q  101 tgtgacagttaacttaaaatcagaattctggagaatcgtgccacgatggagaaacatcgcgccacg 166  Q
    ||||| ||||||||||||||||||| ||||||| ||||||||||||||||||| ||||||||||||    
T  10901398 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacg 10901463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 246 - 322
Target Start/End: Original strand, 29956529 - 29956604
Alignment:
Q  246 tgaagataaaaataaaacgtattttcagcatagatttgtttcagttttttaagggtttactttccactataaatata 322  Q
    ||||||||||||||||||||||||| |    |||||||||||||||||||||||| ||||||| |||||||||||||    
T  29956529 tgaagataaaaataaaacgtatttttattgaagatttgtttcagttttttaagggattacttt-cactataaatata 29956604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 246 - 322
Target Start/End: Original strand, 30005684 - 30005759
Alignment:
Q  246 tgaagataaaaataaaacgtattttcagcatagatttgtttcagttttttaagggtttactttccactataaatata 322  Q
    ||||||||||||||||||||||||| |    |||||||||||||||||||||||| ||||||| |||||||||||||    
T  30005684 tgaagataaaaataaaacgtatttttattgaagatttgtttcagttttttaagggattacttt-cactataaatata 30005759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 246 - 322
Target Start/End: Original strand, 43228156 - 43228231
Alignment:
Q  246 tgaagataaaaataaaacgtattttcagcatagatttgtttcagttttttaagggtttactttccactataaatata 322  Q
    ||||||||||||||||||||||||| |    |||||||||||||||||||||||| ||||||| |||||||||||||    
T  43228156 tgaagataaaaataaaacgtatttttattgaagatttgtttcagttttttaagggattacttt-cactataaatata 43228231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 101 - 175
Target Start/End: Complemental strand, 27762557 - 27762483
Alignment:
Q  101 tgtgacagttaacttaaaatcagaattctggagaatcgtgccacgatggagaaacatcgcgccacgattgttgaa 175  Q
    ||||| ||||||||||||||||| | |||| |||| ||||||||||||||||| || || |||||||||||||||    
T  27762557 tgtgagagttaacttaaaatcaggaatctgaagaaacgtgccacgatggagaagcaacgtgccacgattgttgaa 27762483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 101 - 146
Target Start/End: Original strand, 43228032 - 43228077
Alignment:
Q  101 tgtgacagttaacttaaaatcagaattctggagaatcgtgccacga 146  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||    
T  43228032 tgtgagagttaacttaaaatcagaattctggagaatcgtgccacga 43228077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 246 - 322
Target Start/End: Original strand, 43225951 - 43226026
Alignment:
Q  246 tgaagataaaaataaaacgtattttcagcatagatttgtttcagttttttaagggtttactttccactataaatata 322  Q
    ||||||||||||||||| ||||||| |    |||||||||||||||||||||||| ||||||| |||||||||||||    
T  43225951 tgaagataaaaataaaatgtatttttattgaagatttgtttcagttttttaagggattacttt-cactataaatata 43226026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 350 - 452
Target Start/End: Complemental strand, 15823892 - 15823791
Alignment:
Q  350 agaaaaacagggtttagaaaccaacatacaaactagggtttatagagaatttctcttggcaacaa-cactaaggttgggattgttctgattcaccttgaa 448  Q
    ||||||||| ||||| ||| |||||| ||||||||||||||||||||  |||||||| | ||||| ||||| || || ||||||| ||||||||||||||    
T  15823892 agaaaaacaaggtttggaagccaaca-acaaactagggtttatagagt-tttctctttgaaacaaacactagggctgagattgttttgattcaccttgaa 15823795  T
Q  449 caaa 452  Q
    ||||    
T  15823794 caaa 15823791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 348 - 465
Target Start/End: Complemental strand, 27703455 - 27703338
Alignment:
Q  348 gtagaaaaacagggtttagaaaccaacatacaaactagggttta-tagagaatttctcttggcaacaa-cactaaggttgggattgttctgattcacctt 445  Q
    ||||||||||| ||||||||| | |||| | ||||||||||||  |||||| |||||||||||| ||| ||||| | || |||||||| |||||||||||    
T  27703455 gtagaaaaacaaggtttagaagcaaaca-agaaactagggttttgtagaga-tttctcttggcatcaaacactaggatttggattgttttgattcacctt 27703358  T
Q  446 gaacaaagcactattaggat 465  Q
    ||||||| || | |||||||    
T  27703357 gaacaaaacattgttaggat 27703338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 101 - 149
Target Start/End: Original strand, 6302984 - 6303032
Alignment:
Q  101 tgtgacagttaacttaaaatcagaattctggagaatcgtgccacgatgg 149  Q
    ||||| ||||||||||||||||||| ||||||| |||| ||||||||||    
T  6302984 tgtgagagttaacttaaaatcagaaatctggagcatcgcgccacgatgg 6303032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 358 - 476
Target Start/End: Original strand, 7768559 - 7768672
Alignment:
Q  358 agggtttagaaaccaacatacaaactagggtttatagagaatttctcttggcaaca---acactaaggttgggattgttctgattcaccttgaacaaagc 454  Q
    ||||||||||| |||||||  |||||| ||||| ||||||| ||||||||||||||   | |||||||||| |||     ||||||||||||   ||| |    
T  7768559 agggtttagaagccaacatcaaaactaaggtttgtagagaa-ttctcttggcaacaaacaaactaaggttgagat-----tgattcaccttg--gaaaac 7768650  T
Q  455 actattaggattgagtctcttg 476  Q
    ||||||||||||||||||||||    
T  7768651 actattaggattgagtctcttg 7768672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 101 - 149
Target Start/End: Original strand, 27543946 - 27543994
Alignment:
Q  101 tgtgacagttaacttaaaatcagaattctggagaatcgtgccacgatgg 149  Q
    ||||| ||||||||||||||||||| | ||||| |||||||||||||||    
T  27543946 tgtgagagttaacttaaaatcagaaatttggagtatcgtgccacgatgg 27543994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 101 - 176
Target Start/End: Original strand, 45882659 - 45882734
Alignment:
Q  101 tgtgacagttaacttaaaatcagaattctg-gagaatcgtgccacgatggagaaacatcgcgccacgattgttgaag 176  Q
    ||||| ||||||||||||||||| | ||||  | ||||||||||||||||||||||| || |||||||| |||||||    
T  45882659 tgtgagagttaacttaaaatcagga-tctgcaaaaatcgtgccacgatggagaaacaacgtgccacgatggttgaag 45882734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 101 - 151
Target Start/End: Original strand, 25388618 - 25388668
Alignment:
Q  101 tgtgacagttaacttaaaatcagaattctggagaatcgtgccacgatggag 151  Q
    ||||| |||||||||||||||||  ||||| ||||||||| ||||||||||    
T  25388618 tgtgagagttaacttaaaatcaggtttctgcagaatcgtggcacgatggag 25388668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 356 - 476
Target Start/End: Complemental strand, 46966925 - 46966807
Alignment:
Q  356 acagggtttagaaaccaacatacaaactagggtttatagagaatttctcttggcaac-aacactaaggttgggattgttctgattcaccttgaacaaagc 454  Q
    ||||||||||||| ||||||   ||| || ||||||||||| ||| ||||||||||| ||||||| ||||| |||||||  |||||| ||| |||||| |    
T  46966925 acagggtttagaagccaacaacaaaattaaggtttatagag-attcctcttggcaacaaacactagggttgagattgtttcgattcatcttaaacaaaac 46966827  T
Q  455 actattaggattgagtctcttg 476  Q
    | | ||||||  ||||||||||    
T  46966826 aatgttagga--gagtctcttg 46966807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 102 - 147
Target Start/End: Original strand, 5191374 - 5191419
Alignment:
Q  102 gtgacagttaacttaaaatcagaattctggagaatcgtgccacgat 147  Q
    |||| |||||||||||||||||| ||||| ||||||||| ||||||    
T  5191374 gtgagagttaacttaaaatcagatttctgcagaatcgtggcacgat 5191419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 283 - 336
Target Start/End: Complemental strand, 27101540 - 27101488
Alignment:
Q  283 gtttcagttttttaagggtttactttccactataaatataagccttatatcaga 336  Q
    |||||||||||||||||| ||||||| |||||||||||||  |||| |||||||    
T  27101540 gtttcagttttttaagggattacttt-cactataaatatagaccttgtatcaga 27101488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 101 - 149
Target Start/End: Complemental strand, 7606963 - 7606915
Alignment:
Q  101 tgtgacagttaacttaaaatcagaattctggagaatcgtgccacgatgg 149  Q
    ||||| |||||||||||||||||  ||||| ||||||||| ||||||||    
T  7606963 tgtgagagttaacttaaaatcaggtttctgcagaatcgtgacacgatgg 7606915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 101 - 149
Target Start/End: Complemental strand, 22114842 - 22114794
Alignment:
Q  101 tgtgacagttaacttaaaatcagaattctggagaatcgtgccacgatgg 149  Q
    ||||| |||||||||||||||||  ||||| ||||||||| ||||||||    
T  22114842 tgtgagagttaacttaaaatcaggtttctgtagaatcgtggcacgatgg 22114794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 99 - 147
Target Start/End: Complemental strand, 53896756 - 53896708
Alignment:
Q  99 tgtgtgacagttaacttaaaatcagaattctggagaatcgtgccacgat 147  Q
    ||||||| |||||||||||||||||  ||||| ||||||||| ||||||    
T  53896756 tgtgtgagagttaacttaaaatcaggtttctgcagaatcgtggcacgat 53896708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 282; Significance: 1e-158; HSPs: 37)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 282; E-Value: 1e-158
Query Start/End: Original strand, 100 - 476
Target Start/End: Complemental strand, 44513058 - 44512682
Alignment:
Q  100 gtgtgacagttaacttaaaatcagaattctggagaatcgtgccacgatggagaaacatcgcgccacgattgttgaagtaagattctgaggaagctactgg 199  Q
    |||||| |||||||||||||||| ||||||||||||| |||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||    
T  44513058 gtgtgagagttaacttaaaatcaaaattctggagaattgtgccacgatggagaagcatcgcgccacgattgttgaagcaagattctgaggaagctactgg 44512959  T
Q  200 aaatttcgtgccacgatgaagccgcatcgtgccacgatggcatcgctgaagataaaaataaaacgtattttcagcatagatttgtttcagttttttaagg 299  Q
    || |||||||||||||||||||||||||||||||||||||   |||||||||||    |||||||||||||||| | |||||||||||||||||||||||    
T  44512958 aattttcgtgccacgatgaagccgcatcgtgccacgatggacgcgctgaagatatttttaaaacgtattttcagtaaagatttgtttcagttttttaagg 44512859  T
Q  300 gtttactttccactataaatataagccttatatcagatgataaagtgtgtagaaaaacagggtttagaaaccaacatacaaactagggtttatagagaat 399  Q
    ||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44512858 gtttactttccactataaatataagccttgtataagatgataaagtgtgtagaaaaacagggtttagaaaccaacatacaaactagggtttatagagaat 44512759  T
Q  400 ttctcttggcaacaacacta-aggttgggattgttctgattcaccttgaacaaagcactattaggattgagtctcttg 476  Q
    || |||| ||||||||||||  ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  44512758 tt-tctttgcaacaacactaggggttgggattgttttgattcaccttgaacaaagcactattaggattgagtctcttg 44512682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 278; E-Value: 1e-155
Query Start/End: Original strand, 107 - 476
Target Start/End: Original strand, 25351011 - 25351378
Alignment:
Q  107 agttaacttaaaatcagaattctggagaatcgtgccacgatggagaaacatcgcgccacgattgttgaagtaagattctgaggaagctactggaaatttc 206  Q
    ||||||||||||||||||| | ||||||||||||||||||||||||| ||||| ||||||||||||| || ||||| |||||||||||||||||| ||||    
T  25351011 agttaacttaaaatcagaaatttggagaatcgtgccacgatggagaagcatcgtgccacgattgttggagcaagatcctgaggaagctactggaattttc 25351110  T
Q  207 gtgccacgatgaagccgcatcgtgccacgatggcatcgctgaagataaaaataaaacgtattttcagcatagatttgtttcagttttttaagggtttact 306  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    |||||| |||||||||  |||||||||||||||||||||||||||||||    
T  25351111 gtgccacgatgaagccgcatcgtgccacgatggcatcgctgaagatatttttaaaacatattttcag-ttagatttgtttcagttttttaagggtttact 25351209  T
Q  307 ttccactataaatataagccttatatcagatgataaagtgtgtagaaaaacagggtttagaaaccaacatacaaactagggtttatagagaatttctctt 406  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  25351210 ttccactataaatataagccttatatcagatgataaagtgtgtag-aaaacagggtttagaagccaacatacaaactagggtttatagagaatttctctt 25351308  T
Q  407 ggcaacaacactaaggttgggattgttctgattcaccttgaacaaagcactattaggattgagtctcttg 476  Q
    ||||||||||||| ||||| ||||||| |||||||||||||||||| |||||||||||||||||||||||    
T  25351309 ggcaacaacactagggttgagattgttttgattcaccttgaacaaaacactattaggattgagtctcttg 25351378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 258; E-Value: 1e-143
Query Start/End: Original strand, 107 - 476
Target Start/End: Original strand, 25356705 - 25357072
Alignment:
Q  107 agttaacttaaaatcagaattctggagaatcgtgccacgatggagaaacatcgcgccacgattgttgaagtaagattctgaggaagctactggaaatttc 206  Q
    ||||||||||||||||||| | ||||||||||||||||||||||||| ||||| ||||||||||||| || ||||| |||||||||||||||||| ||||    
T  25356705 agttaacttaaaatcagaaatttggagaatcgtgccacgatggagaagcatcgtgccacgattgttggagcaagatcctgaggaagctactggaattttc 25356804  T
Q  207 gtgccacgatgaagccgcatcgtgccacgatggcatcgctgaagataaaaataaaacgtattttcagcatagatttgtttcagttttttaagggtttact 306  Q
    ||||||||||||||||||||||||||||||||| |    ||||||||    |||||| |||||||||  |||||||||||||||||||||||||||||||    
T  25356805 gtgccacgatgaagccgcatcgtgccacgatggaaaaaatgaagatatttttaaaacatattttcagt-tagatttgtttcagttttttaagggtttact 25356903  T
Q  307 ttccactataaatataagccttatatcagatgataaagtgtgtagaaaaacagggtttagaaaccaacatacaaactagggtttatagagaatttctctt 406  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||    
T  25356904 ttccactataaatataagccttatatcagatgataaagtgtgtagaaaa-cagggtttagaagccaacatacaaactagggtttatagagaatttctctt 25357002  T
Q  407 ggcaacaacactaaggttgggattgttctgattcaccttgaacaaagcactattaggattgagtctcttg 476  Q
    ||||||||||||| ||||| ||||||| |||||||||||||||||| |||||||||||||||||||||||    
T  25357003 ggcaacaacactagggttgagattgttttgattcaccttgaacaaaacactattaggattgagtctcttg 25357072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 249; E-Value: 1e-138
Query Start/End: Original strand, 100 - 476
Target Start/End: Complemental strand, 34547374 - 34547020
Alignment:
Q  100 gtgtgacagttaacttaaaatcagaattctggagaatcgtgccacgatggagaaacatcgcgccacgattgttgaagtaagattctgaggaagctactgg 199  Q
    |||||| ||||||||||||||||||| |||||||||||||| |||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||    
T  34547374 gtgtgagagttaacttaaaatcagaaatctggagaatcgtgtcacgatggagaagcatcgcgccacgattgttgaagcaagattctgaggaagctactgg 34547275  T
Q  200 aaatttcgtgccacgatgaagccgcatcgtgccacgatggcatcgctgaagataaaaataaaacgtattttcagcatagatttgtttcagttttttaagg 299  Q
    || |||||                     |||||||||||||||| ||||||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  34547274 aattttcg---------------------tgccacgatggcatcgttgaagataaaaataaaacgtattttcagt-tagatttgtttcagttttttaagg 34547197  T
Q  300 gtttactttccactataaatataagccttatatcagatgataaagtgtgtagaaaaacagggtttagaaaccaacatacaaactagggtttatagagaat 399  Q
    ||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34547196 gtttactttccactataaatataagtcttgtatcagatgataaagtgtgtagaaaaacagggtttagaaaccaacatacaaactagggtttatagagaat 34547097  T
Q  400 ttctcttggcaacaacactaaggttgggattgttctgattcaccttgaacaaagcactattaggattgagtctcttg 476  Q
    |||||||||||||||||||| ||||||||||||| |||||||||||||||| |||||||||||||||||||||||||    
T  34547096 ttctcttggcaacaacactagggttgggattgttttgattcaccttgaacagagcactattaggattgagtctcttg 34547020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 101 - 476
Target Start/End: Original strand, 25405046 - 25405418
Alignment:
Q  101 tgtgacagttaacttaaaatcagaattctggagaatcgtgccacgatggagaaacatcgcgccacgattgttgaagtaagattctgaggaagctactgga 200  Q
    ||||| ||||||||||||||||||| ||||||| ||||||||||||||||||| |||||||||||||| ||||||| |||||||   |||||  ||||||    
T  25405046 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 25405145  T
Q  201 aatttcgtgccacgatgaagccgcatcgtgccacgatggcatcgctgaagataaaaataaaacgtattttcagcatagatttgtttcagttttttaaggg 300  Q
      |||||||||||||||||||| ||||| ||||||||||   |||||||||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  25405146 tttttcgtgccacgatgaagcctcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcag-ttagatttgtttcagttttttaaggg 25405244  T
Q  301 tttactttccactataaatataagccttatatcagatgat-aaagtgtgtagaaaaacagggtttagaaaccaacatacaaactagggtttatagagaat 399  Q
    ||||||||||||||||||||  |||||| ||||||||||| |||||||||||||||||| |||||||  ||||||| |||||||||||||||||||||||    
T  25405245 tttactttccactataaata-cagccttgtatcagatgataaaagtgtgtagaaaaacaaggtttag--accaacaaacaaactagggtttatagagaat 25405341  T
Q  400 ttctcttggcaacaacactaaggttgggattgttctgattcaccttgaacaaagcactattaggattgagtctcttg 476  Q
     ||||||||||||||| ||| ||||||||||||| |||||||||||||||||| |||||||||||||||||||||||    
T  25405342 ctctcttggcaacaactctagggttgggattgttttgattcaccttgaacaaaacactattaggattgagtctcttg 25405418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 101 - 475
Target Start/End: Complemental strand, 7465029 - 7464676
Alignment:
Q  101 tgtgacagttaacttaaaatcagaattctggagaatcgtgccacgatggagaaacatcgcgccacgattgttgaagtaagattctgaggaagctactgga 200  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||    
T  7465029 tgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatggagaagcatcgcgccacgattgttgaagcaagattctgaggaagctactgga 7464930  T
Q  201 aatttcgtgccacgatgaagccgcatcgtgccacgatggcatcgctgaagataaaaataaaacgtattttcagcatagatttgtttcagttttttaaggg 300  Q
    |||||||                     |||||||||||   |||| |||||||   |||||||||||||||||| | ||||||||||||||||||||||    
T  7464929 aatttcg---------------------tgccacgatggacgcgctcaagataattttaaaacgtattttcagcaaaaatttgtttcagttttttaaggg 7464851  T
Q  301 tttactttccactataaatataagccttatatcagatgataaagtgtgtagaaaaacagggtttagaaaccaacatacaaactagggtttatagagaatt 400  Q
    |||||||||||||||||||||||| ||| ||| |||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||    
T  7464850 tttactttccactataaatataagtcttgtataagatgataaagtgtgtagaaaaacagggtttaaaagccaacatacaaactagggtttatagagaatt 7464751  T
Q  401 tctcttggcaacaacactaaggttgggattgttctgattcaccttgaacaaagcactattaggattgagtctctt 475  Q
    ||||||||||||||||||| |||| |||||||| |||||||||||||||||||||||||||||||||||||||||    
T  7464750 tctcttggcaacaacactagggtttggattgttttgattcaccttgaacaaagcactattaggattgagtctctt 7464676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 101 - 476
Target Start/End: Original strand, 7069433 - 7069805
Alignment:
Q  101 tgtgacagttaacttaaaatcagaattctggagaatcgtgccacgatggagaaacatcgcgccacgattgttgaagtaagattctgaggaagctactgga 200  Q
    ||||| ||||||||||||||||||| ||||||| ||||||||||||||||||| |||||||||||||| ||||||| |||||||   |||||  ||||||    
T  7069433 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 7069532  T
Q  201 aatttcgtgccacgatgaagccgcatcgtgccacgatggcatcgctgaagataaaaataaaacgtattttcagcatagatttgtttcagttttttaaggg 300  Q
    |||||||||||||||||||| | ||||| ||||||||||   ||||||||||||||  |||||||||||||||  |||||||||||||||||||||||||    
T  7069533 aatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagataaaataaaaacgtattttcag-ttagatttgtttcagttttttaaggg 7069631  T
Q  301 tttactttccactataaatataagccttatatcagatgat-aaagtgtgtagaaaaacagggtttagaaaccaacatacaaactagggtttatagagaat 399  Q
    ||||||||||||||||||||  |||||| ||||||||||| |||||||||||||||||| |||||||  ||||||| |||||||||||||||||||||||    
T  7069632 tttactttccactataaata-cagccttgtatcagatgataaaagtgtgtagaaaaacaaggtttag--accaacaaacaaactagggtttatagagaat 7069728  T
Q  400 ttctcttggcaacaacactaaggttgggattgttctgattcaccttgaacaaagcactattaggattgagtctcttg 476  Q
     ||||||||||||||| ||| ||||||||||||| |||||||||||||||||| |||||||||||||||||||||||    
T  7069729 ctctcttggcaacaactctagggttgggattgttttgattcaccttgaacaaaacactattaggattgagtctcttg 7069805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 107 - 476
Target Start/End: Complemental strand, 3320573 - 3320207
Alignment:
Q  107 agttaacttaaaatcagaattctggagaatcgtgccacgatggagaaacatcgcgccacgattgttgaagtaagattctgaggaagctactggaaatttc 206  Q
    ||||||||||||||||||| ||||||| ||||||||||||||||||| |||||||||||||| ||||||| |||||||   |||||| ||||||||||||    
T  3320573 agttaacttaaaatcagaaatctggagcatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagccactggaaatttc 3320474  T
Q  207 gtgccacgatgaagccgcatcgtgccacgatggcatcgctgaagataaaaataaaacgtattttcagcatagatttgtttcagttttttaagggtttact 306  Q
    |||||||||||||||| ||||| ||||||||||   |||||||||||||||||||||||||||||||  |||||||||||||||||| ||||||||||||    
T  3320473 gtgccacgatgaagcctcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcag-ttagatttgtttcagttttataagggtttact 3320375  T
Q  307 ttccactataaatataagccttatatcagatgat-aaagtgtgtagaaaaacagggtttagaaaccaacatacaaactagggtttatagagaatttctct 405  Q
    ||| ||||||||||  |||||| ||||||||||| |||||||||||||||||| |||||||  | ||||| ||||||||||||||||||||||| ||| |    
T  3320374 ttctactataaata-cagccttgtatcagatgataaaagtgtgtagaaaaacaaggtttag--atcaacaaacaaactagggtttatagagaatctctat 3320278  T
Q  406 tggcaacaacactaaggttgggattgttctgattcaccttgaacaaagcactattaggattgagtctcttg 476  Q
    |||||||||| ||| ||||||||||||| |||||||||||||||||| |||||||||||||||||||||||    
T  3320277 tggcaacaactctagggttgggattgttttgattcaccttgaacaaaacactattaggattgagtctcttg 3320207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 101 - 476
Target Start/End: Original strand, 7074440 - 7074812
Alignment:
Q  101 tgtgacagttaacttaaaatcagaattctggagaatcgtgccacgatggagaaacatcgcgccacgattgttgaagtaagattctgaggaagctactgga 200  Q
    ||||| ||||||||||||||||||| ||||||| ||||||||||||||||||| ||||| |||||||| ||||||| |||||||   |||||  ||||||    
T  7074440 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgtgccacgatggttgaagcaagattcctgggaagacactgga 7074539  T
Q  201 aatttcgtgccacgatgaagccgcatcgtgccacgatggcatcgctgaagataaaaataaaacgtattttcagcatagatttgtttcagttttttaaggg 300  Q
    |||||||||||||||||||| | ||||| ||||||||||   ||||||||||||||  |||||||||||||||  |||||||||||||||||||||||||    
T  7074540 aatttcgtgccacgatgaagactcatcgcgccacgatggtcgcgctgaagataaaataaaaacgtattttcag-ttagatttgtttcagttttttaaggg 7074638  T
Q  301 tttactttccactataaatataagccttatatcagatgat-aaagtgtgtagaaaaacagggtttagaaaccaacatacaaactagggtttatagagaat 399  Q
    ||||||||||||||||||||  |||||| ||||||||||| |||||||||||||||||| |||||||  ||||||| |||||||||||||||||||||||    
T  7074639 tttactttccactataaata-cagccttgtatcagatgataaaagtgtgtagaaaaacaaggtttag--accaacaaacaaactagggtttatagagaat 7074735  T
Q  400 ttctcttggcaacaacactaaggttgggattgttctgattcaccttgaacaaagcactattaggattgagtctcttg 476  Q
     ||||||||||||||| ||| ||||||||||||| |||||||||||||||||| |||||||||||||||||||||||    
T  7074736 ctctcttggcaacaactctagggttgggattgttttgattcaccttgaacaaaacactattaggattgagtctcttg 7074812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 218; E-Value: 1e-119
Query Start/End: Original strand, 107 - 476
Target Start/End: Original strand, 25409809 - 25410155
Alignment:
Q  107 agttaacttaaaatcagaattctggagaatcgtgccacgatggagaaacatcgcgccacgattgttgaagtaagattctgaggaagctactggaaatttc 206  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| || ||||| |||||||||||||||||| ||||    
T  25409809 agttaacttaaaatcagaaatctggagaatcgtgccacgatggagaagcatcgcgccacgattgttggaggaagatcctgaggaagctactggaattttc 25409908  T
Q  207 gtgccacgatgaagccgcatcgtgccacgatggcatcgctgaagataaaaataaaacgtattttcagcatagatttgtttcagttttttaagggtttact 306  Q
    |                     |||||||||||||||||||||||||    |||||| |||||||||  |||||||||||||||||||||||||||||||    
T  25409909 g---------------------tgccacgatggcatcgctgaagatatttttaaaacatattttcagt-tagatttgtttcagttttttaagggtttact 25409986  T
Q  307 ttccactataaatataagccttatatcagatgataaagtgtgtagaaaaacagggtttagaaaccaacatacaaactagggtttatagagaatttctctt 406  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||    
T  25409987 ttccactataaatataagccttgtatcagatgataaagtgtgtagaaaa-cagggtttagaagccaacatacaaactagggtttatagagaatttctctt 25410085  T
Q  407 ggcaacaacactaaggttgggattgttctgattcaccttgaacaaagcactattaggattgagtctcttg 476  Q
    ||||||||||||| ||||||||||||| |||||||||||||||||| |||||||||||||||||||||||    
T  25410086 ggcaacaacactagggttgggattgttttgattcaccttgaacaaaacactattaggattgagtctcttg 25410155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 107 - 476
Target Start/End: Complemental strand, 3325321 - 3324955
Alignment:
Q  107 agttaacttaaaatcagaattctggagaatcgtgccacgatggagaaacatcgcgccacgattgttgaagtaagattctgaggaagctactggaaatttc 206  Q
    ||||||||||||||||||| |||| || ||||||||||||||||||| |||||| ||||||| ||||||| |||||||   |||||| ||||||||||||    
T  3325321 agttaacttaaaatcagaaatctgaagcatcgtgccacgatggagaagcatcgcaccacgatggttgaagcaagattcctgggaagccactggaaatttc 3325222  T
Q  207 gtgccacgatgaagccgcatcgtgccacgatggcatcgctgaagataaaaataaaacgtattttcagcatagatttgtttcagttttttaagggtttact 306  Q
    |||||||||||||||| ||||| ||||||||||   |||||||||||||||||||||||||||||||  |||||||||||||||||| ||||||||||||    
T  3325221 gtgccacgatgaagcctcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcag-ttagatttgtttcagttttataagggtttact 3325123  T
Q  307 ttccactataaatataagccttatatcagatgat-aaagtgtgtagaaaaacagggtttagaaaccaacatacaaactagggtttatagagaatttctct 405  Q
    ||| ||||||||||  |||||| ||||||||||| |||||||||||||||||| |||||||  | ||||| ||||||||||||||||||||||| ||| |    
T  3325122 ttctactataaata-cagccttgtatcagatgataaaagtgtgtagaaaaacaaggtttag--atcaacaaacaaactagggtttatagagaatctctat 3325026  T
Q  406 tggcaacaacactaaggttgggattgttctgattcaccttgaacaaagcactattaggattgagtctcttg 476  Q
    |||||||||| ||| ||||||||||||| |||||||||||||||||| |||||||||||||||||||||||    
T  3325025 tggcaacaactctagggttgggattgttttgattcaccttgaacaaaacactattaggattgagtctcttg 3324955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 208; E-Value: 1e-113
Query Start/End: Original strand, 101 - 476
Target Start/End: Original strand, 30246642 - 30246995
Alignment:
Q  101 tgtgacagttaacttaaaatcagaattctggagaatcgtgccacgatggagaaacatcgcgccacgattgttgaagtaagattctgaggaagctactgga 200  Q
    ||||| ||||||||||||||||||| ||||||||||||||||||||||||||| ||| |||||||||||||||||| |||||||||||||||||| ||||    
T  30246642 tgtgagagttaacttaaaatcagaaatctggagaatcgtgccacgatggagaagcattgcgccacgattgttgaagcaagattctgaggaagctattgga 30246741  T
Q  201 aatttcgtgccacgatgaagccgcatcgtgccacgatggcatcgctgaagataaaaataaaacgtattttcagcatagatttgtttcagttttttaaggg 300  Q
    |||||||                     |||||||||||   |||||||||||    ||||||||||||||||   ||||||||||||||||||||||||    
T  30246742 aatttcg---------------------tgccacgatggacgcgctgaagatatttttaaaacgtattttcagtc-agatttgtttcagttttttaaggg 30246819  T
Q  301 tttactttccactataaatataagccttatatcagatgataaagtgtgtagaaaaacagggtttagaaaccaacatacaaactagggtttatagagaatt 400  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||| ||||||   ||||||||||||||||||||||    
T  30246820 tttactttccactataaatataagccttgtatcagatgataaagtgtggagaaaaacagggtttagaagccaacaacaaaactagggtttatagagaatt 30246919  T
Q  401 tctcttggcaacaacactaaggttgggattgttctgattcaccttgaacaaagcactattaggattgagtctcttg 476  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  30246920 tctcttggcaacaacactacggttgggattgttttgattcaccttgaacaaagcactattaggattgagtctcttg 30246995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 133; E-Value: 6e-69
Query Start/End: Original strand, 260 - 476
Target Start/End: Complemental strand, 44144236 - 44144023
Alignment:
Q  260 aaacgtattttcagcatagatttgtttcagttttttaagggtttactttccactataaatataagccttatatcagatgataaagtgtgtagaaaaacag 359  Q
    ||||||||||||||   ||||||||| || | ||||||||||| ||||||||||||||||||||| ||| ||||||| |||||||||||||||||| ||     
T  44144236 aaacgtattttcagtgaagatttgttcca-tattttaagggtt-actttccactataaatataagtcttgtatcagacgataaagtgtgtagaaaa-caa 44144140  T
Q  360 ggtttagaaaccaacatacaaactagggtttatagagaatttctcttggcaacaacactaaggttgggattgttctgattcaccttgaacaaagcactat 459  Q
    ||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||| ||||  ||||||| |||||||||||||||||||||||||    
T  44144139 ggtttagaagccaacatacaaactagggtttatagagaatttttcttggcaacaacactagggttatgattgttttgattcaccttgaacaaagcactat 44144040  T
Q  460 taggattgagtctcttg 476  Q
    |||||||||||||||||    
T  44144039 taggattgagtctcttg 44144023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 128; E-Value: 6e-66
Query Start/End: Original strand, 305 - 475
Target Start/End: Complemental strand, 44016989 - 44016819
Alignment:
Q  305 ctttccactataaatataagccttatatcagatgataaagtgtgtagaaaaacagggtttagaaaccaacatacaaactagggtttatagagaatttctc 404  Q
    ||||||||||||||||||| |||| ||||||||||| | |||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||    
T  44016989 ctttccactataaatataaaccttgtatcagatgattatgtgtgtagaaaa-cagggtttagaagccaacatacaaactagggtttatagagaatttctc 44016891  T
Q  405 ttggcaac-aacactaaggttgggattgttctgattcaccttgaacaaagcactattaggattgagtctctt 475  Q
    |||||||| ||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  44016890 ttggcaacaaacactagggttgggattgttttgattcaccttgaacaaagcactattaggattgagtctctt 44016819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 308 - 476
Target Start/End: Complemental strand, 8378829 - 8378661
Alignment:
Q  308 tccactataaatataagccttatatcagatgataaa-gtgtgtagaaaaacagggtttagaaaccaacatacaaactagggtttatagagaatttctctt 406  Q
    ||||||||||||| | ||||| |||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  8378829 tccactataaataca-gccttgtatcagatgataaaagtgtgtagaaaaacaaggtttagaaaccaacatacaaactagggtttatagagaatttctctt 8378731  T
Q  407 ggcaacaacactaaggttgggattgttctgattcaccttgaacaaagcactattaggattgagtctcttg 476  Q
    ||||||||| ||| ||||||||||||| |||||||||||||||||| |||||||| ||||||||||||||    
T  8378730 ggcaacaactctagggttgggattgttttgattcaccttgaacaaaacactattaagattgagtctcttg 8378661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 305 - 475
Target Start/End: Complemental strand, 44011078 - 44010908
Alignment:
Q  305 ctttccactataaatataagccttatatcagatgataaagtgtgtagaaaaacagggtttagaaaccaacatacaaactagggtttatagagaatttctc 404  Q
    ||||||||||||||||||| |||| ||||||||||| | |||||||||||| |||||||||||| ||||||||||||||| |||||||||||||||| ||    
T  44011078 ctttccactataaatataaaccttgtatcagatgattatgtgtgtagaaaa-cagggtttagaagccaacatacaaactatggtttatagagaatttttc 44010980  T
Q  405 ttggcaacaa-cactaaggttgggattgttctgattcaccttgaacaaagcactattaggattgagtctctt 475  Q
    |||||||||| ||||| ||||||||||||| |||| ||||||||||||||||||||||||||||||||||||    
T  44010979 ttggcaacaaacactagggttgggattgttttgatccaccttgaacaaagcactattaggattgagtctctt 44010908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 260 - 476
Target Start/End: Original strand, 42006476 - 42006688
Alignment:
Q  260 aaacgtattttcagcatagatttgtttcagttttttaagggtttactttccactataaatataagccttatatcagatgataaagtgtgtagaaaaacag 359  Q
    ||||||||||||||   ||||||||| || | ||||||||||| |||||  ||||||||||||| || | ||| |||||| ||| |||||||||||||||    
T  42006476 aaacgtattttcagtgaagatttgttcca-tattttaagggtt-actttt-actataaatataaaccgtgtataagatgaaaaa-tgtgtagaaaaacag 42006571  T
Q  360 ggtttagaaaccaacatacaaactagggtttatagagaatttctcttggcaacaacactaaggttgggattgttctgattcaccttgaacaaagcactat 459  Q
    ||||||||| |||||| |||||||| |||||||||| ||||||||||||||| ||||||| ||||||||||||| |||||||||||||||||| ||||||    
T  42006572 ggtttagaagccaacaaacaaactatggtttatagaaaatttctcttggcaagaacactagggttgggattgttttgattcaccttgaacaaaacactat 42006671  T
Q  460 taggattgagtctcttg 476  Q
    |||||||||||||||||    
T  42006672 taggattgagtctcttg 42006688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 156 - 476
Target Start/End: Original strand, 2120626 - 2120924
Alignment:
Q  156 atcgcgccacgattgttgaagtaagattctgaggaagctactggaaatttcgtgccacgatgaagccgcatcgtgccacgatggcatcgctgaagataaa 255  Q
    ||||||||||||||| ||||| || |||||||||||| | ||||||||||||| ||||||||   ||| |||||| ||||||||   |||||||||||      
T  2120626 atcgcgccacgattggtgaagcaaaattctgaggaagtttctggaaatttcgtaccacgatggctccgtatcgtggcacgatggtcgcgctgaagatatt 2120725  T
Q  256 aataaaacgtattttc-agcatagatttgtttcagttttttaagggtttactttccactataaatataagccttatatcagatgataaagtgtgtagaaa 354  Q
      |||||||||||||  |||| |||||||||||||||||||||||||| ||| ||||||||||||| |||||||                      ||||    
T  2120726 tttaaaacgtattttttagca-agatttgtttcagttttttaagggtt-actctccactataaatacaagcctt----------------------gaaa 2120801  T
Q  355 aacagggtttagaaaccaacatacaaactagggtttatagagaatttctcttggcaacaacactaaggttgggattgtt-ctgattcaccttgaacaaag 453  Q
    |||| ||||||||| |||||||||||||||||||||||||||| ||||||||||||||||| ||| |||||||||||||  |||||||||||| |||||     
T  2120802 aacaaggtttagaagccaacatacaaactagggtttatagagattttctcttggcaacaactctagggttgggattgttgttgattcaccttggacaaaa 2120901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 323 - 476
Target Start/End: Complemental strand, 15541304 - 15541152
Alignment:
Q  323 agccttatatcagatgataaa-gtgtgtagaaaaacagggtttagaaaccaacatacaaactagggtttatagagaatttctcttggcaacaacactaag 421  Q
    |||||| |||||||||||||| ||||||||||||||| ||||||||  |||||| ||||||||||||||||||||||| ||||||||||||||| ||| |    
T  15541304 agccttgtatcagatgataaaagtgtgtagaaaaacaaggtttaga--ccaacaaacaaactagggtttatagagaatctctcttggcaacaactctagg 15541207  T
Q  422 gttgggattgttctgattcaccttgaacaaagcactattaggattgagtctcttg 476  Q
    |||||||||||| |||||||||||||||||| |||||||||||||||||||||||    
T  15541206 gttgggattgttttgattcaccttgaacaaaacactattaggattgagtctcttg 15541152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 101 - 217
Target Start/End: Complemental strand, 8378949 - 8378833
Alignment:
Q  101 tgtgacagttaacttaaaatcagaattctggagaatcgtgccacgatggagaaacatcgcgccacgattgttgaagtaagattctgaggaagctactgga 200  Q
    ||||| ||||||||||||||||||| | ||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||    
T  8378949 tgtgagagttaacttaaaatcagaaatttggagaatcgtgccacgatggagaagcatcgcgccacgattgttgaagcaagattctgaggaagctactgga 8378850  T
Q  201 aatttcgtgccacgatg 217  Q
    ||||||||| |||||||    
T  8378849 aatttcgtggcacgatg 8378833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 353 - 476
Target Start/End: Original strand, 21369543 - 21369667
Alignment:
Q  353 aaaacagggtttagaaaccaacatacaaactagggtttatagagaatttctcttggcaac-aacactaaggttgggattgttctgattcaccttgaacaa 451  Q
    |||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||| |||| || ||||| ||||||| |||||||||||||||||    
T  21369543 aaaacagggtttagaagccaacatacaaactagggtttatagagaaattctcttggcaacaaacattagggttgagattgttttgattcaccttgaacaa 21369642  T
Q  452 agcactattaggattgagtctcttg 476  Q
    | |||||||||||||||||||||||    
T  21369643 aacactattaggattgagtctcttg 21369667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 15 - 98
Target Start/End: Complemental strand, 9804422 - 9804339
Alignment:
Q  15 atgaaggaacaaaagttgagtacagaagctgtgaaagctcaactaatggaagttacgttagtacaaaagcatcaaaatgagatc 98  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9804422 atgaaggaacaaaagttgagtacagaagctgtgaaagctcaactaatggaagttacgttagtacaaaagcatcaaaatgagatc 9804339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 370 - 476
Target Start/End: Complemental strand, 1099697 - 1099591
Alignment:
Q  370 ccaacatacaaactagggtttatagagaatttctcttggcaacaacactaaggttgggattgttctgattcaccttgaacaaagcactattaggattgag 469  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||  |||||| |||||||| ||||||||| |||||||||||||||     
T  1099697 ccaacatacaaactagggtttatagagaatttctcttggcaacaacactagggttgaaattgttttgattcacgttgaacaaaacactattaggattgac 1099598  T
Q  470 tctcttg 476  Q
    |||||||    
T  1099597 tctcttg 1099591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 107 - 328
Target Start/End: Original strand, 40946080 - 40946300
Alignment:
Q  107 agttaacttaaaatcagaattctggagaatcgtgccacgatggagaaacatcgcgccacgattgttgaagtaagattct-gaggaagctactggaaattt 205  Q
    |||||||||||||||||||||||| ||||||||||||||||| |||| | ||| |||||||||||||||| || ||||| ||| || | ||||||||  |    
T  40946080 agttaacttaaaatcagaattctgaagaatcgtgccacgatgaagaagcttcgtgccacgattgttgaagcaaaattctggagcaatc-actggaaaaat 40946178  T
Q  206 cgtgccacgatgaagccgcatcgtgccacgatggcatcgctgaagataaaaataaaacgtattttcagcatagatttgtttcagttttttaagggtttac 305  Q
    |||| ||||||     || |||||||||||||||      |||||||||||||||||| |||||| |    |||||||||||||||||||||||| ||||    
T  40946179 cgtgtcacgattggatcgaatcgtgccacgatggtgcgattgaagataaaaataaaacatatttttattgaagatttgtttcagttttttaagggattac 40946278  T
Q  306 tttccactataaatataagcctt 328  Q
    ||| |||||||||||||| ||||    
T  40946279 ttt-cactataaatataaacctt 40946300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 311 - 476
Target Start/End: Complemental strand, 6067522 - 6067357
Alignment:
Q  311 actataaatataagccttatatcagatgataaagtgtgtagaaaaacagggtttagaaaccaacatacaaactagggtttatagagaatttctcttggca 410  Q
    |||||||||||||  | | |||||||||| || ||||| |||||| || ||||||||| |||||| |||||||||||||||||||||| ||||||||| |    
T  6067522 actataaatataaatcctgtatcagatgaaaacgtgtgaagaaaa-catggtttagaagccaacaaacaaactagggtttatagagaa-ttctcttggta 6067425  T
Q  411 ac-aacactaaggttgggattg-ttctgattcaccttgaacaaagcactattaggattgagtctcttg 476  Q
    || ||||||| ||||||||||| || |||||||||||||||||| || |  ||||||| |||||||||    
T  6067424 acaaacactagggttgggattgtttttgattcaccttgaacaaaacattgataggatttagtctcttg 6067357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 15 - 75
Target Start/End: Complemental strand, 9763819 - 9763759
Alignment:
Q  15 atgaaggaacaaaagttgagtacagaagctgtgaaagctcaactaatggaagttacgttag 75  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  9763819 atgaaggaacaaaagttgagtacagaagctgtgaaagctcaactaatggaagtcacgttag 9763759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 101 - 175
Target Start/End: Complemental strand, 44144438 - 44144364
Alignment:
Q  101 tgtgacagttaacttaaaatcagaattctggagaatcgtgccacgatggagaaacatcgcgccacgattgttgaa 175  Q
    ||||| ||||||||||||||||| | ||| ||||| |||||||||||||||||||| || |||||||||||||||    
T  44144438 tgtgagagttaacttaaaatcaggaatctagagaaacgtgccacgatggagaaacaacgtgccacgattgttgaa 44144364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 99 - 147
Target Start/End: Original strand, 48457439 - 48457487
Alignment:
Q  99 tgtgtgacagttaacttaaaatcagaattctggagaatcgtgccacgat 147  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||    
T  48457439 tgtgtgagagttaacttaaaatcagaattctggagaatcgtgccacgat 48457487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 246 - 335
Target Start/End: Original strand, 48457544 - 48457632
Alignment:
Q  246 tgaagataaaaataaaacgtattttcagcatagatttgtttcagttttttaagggtttactttccactataaatataagccttatatcag 335  Q
    ||||||| ||||||||||||||||| |    |||||||||||||||||||||||| ||||||| |||||||||||||  |||| ||||||    
T  48457544 tgaagattaaaataaaacgtatttttattgaagatttgtttcagttttttaagggattacttt-cactataaatatagaccttgtatcag 48457632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 358 - 476
Target Start/End: Original strand, 6048890 - 6049002
Alignment:
Q  358 agggtttagaaaccaacatacaaactagggtttatagagaatttctcttggcaac-aacactaaggttgggattgttctgattcaccttgaacaaagcac 456  Q
    ||||||||||| |||||||  |||||||||||| || |||| ||||||||||||| ||||||| | |||||||     |||||||||||||| ||| |||    
T  6048890 agggtttagaagccaacatcaaaactagggtttgtaaagaa-ttctcttggcaacaaacactaggtttgggat-----tgattcaccttgaagaaa-cac 6048982  T
Q  457 tattaggattgagtctcttg 476  Q
    |||||||||||| |||||||    
T  6048983 tattaggattgaatctcttg 6049002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 362 - 476
Target Start/End: Original strand, 26210565 - 26210672
Alignment:
Q  362 tttagaaaccaacatacaaactagggtttatagagaatttctcttggcaacaacactaaggttgggattgttctgattcaccttgaacaaagcactatta 461  Q
    ||||||| ||||| |  |||||||||||| ||||||||| |||||||||||||||||| ||||| |||||     |||||||||| | |||  |||||||    
T  26210565 tttagaatccaacctcaaaactagggtttgtagagaatt-ctcttggcaacaacactagggttgtgattg-----attcaccttggagaaat-actatta 26210657  T
Q  462 ggattgagtctcttg 476  Q
    |||||||||||||||    
T  26210658 ggattgagtctcttg 26210672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 99 - 147
Target Start/End: Original strand, 2120590 - 2120638
Alignment:
Q  99 tgtgtgacagttaacttaaaatcagaattctggagaatcgtgccacgat 147  Q
    ||||||| ||||||||||||||||||||||||||| |||| ||||||||    
T  2120590 tgtgtgagagttaacttaaaatcagaattctggagtatcgcgccacgat 2120638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 435 - 476
Target Start/End: Complemental strand, 12310213 - 12310173
Alignment:
Q  435 tgattcaccttgaacaaagcactattaggattgagtctcttg 476  Q
    |||||||||||||||||| |||||||||||||||||||||||    
T  12310213 tgattcaccttgaacaaa-cactattaggattgagtctcttg 12310173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 101 - 149
Target Start/End: Original strand, 3878322 - 3878370
Alignment:
Q  101 tgtgacagttaacttaaaatcagaattctggagaatcgtgccacgatgg 149  Q
    ||||| |||||||||||||||||| ||||| ||||||||| ||||||||    
T  3878322 tgtgagagttaacttaaaatcagatttctgcagaatcgtggcacgatgg 3878370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 358 - 431
Target Start/End: Original strand, 11081527 - 11081600
Alignment:
Q  358 agggtttagaaaccaacatacaaactagggtttatagagaatttctcttggcaac-aacactaaggttgggattg 431  Q
    ||||||||||| ||||||   |||||||||||| ||||||| ||||||||||||| ||||||| ||||| |||||    
T  11081527 agggtttagaagccaacaacaaaactagggtttgtagagaa-ttctcttggcaacaaacactagggttgagattg 11081600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 406 - 450
Target Start/End: Complemental strand, 1099761 - 1099717
Alignment:
Q  406 tggcaacaacactaaggttgggattgttctgattcaccttgaaca 450  Q
    |||||||||||||| ||||| ||||||| |||||||| |||||||    
T  1099761 tggcaacaacactagggttgagattgttttgattcacgttgaaca 1099717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 101 - 149
Target Start/End: Complemental strand, 40837261 - 40837213
Alignment:
Q  101 tgtgacagttaacttaaaatcagaattctggagaatcgtgccacgatgg 149  Q
    ||||| |||||||||||||||||  ||||| ||||||||| ||||||||    
T  40837261 tgtgagagttaacttaaaatcaggtttctgcagaatcgtggcacgatgg 40837213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 281; Significance: 1e-157; HSPs: 23)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 281; E-Value: 1e-157
Query Start/End: Original strand, 101 - 476
Target Start/End: Original strand, 9526117 - 9526491
Alignment:
Q  101 tgtgacagttaacttaaaatcagaattctggagaatcgtgccacgatggagaaacatcgcgccacgattgttgaagtaagatt-ctgaggaagctactgg 199  Q
    ||||| ||||||||||||||||||| ||||||| ||||||||||||||||||| |||||||||||||| ||||||| |||||| ||| |||||  |||||    
T  9526117 tgtgagagttaacttaaaatcagaaatctggagcatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagatttctg-ggaagacactgg 9526215  T
Q  200 aaatttcgtgccacgatgaagccgcatcgtgccacgatggcatcgctgaagataaaaataaaacgtattttcagcatagatttgtttcagttttttaagg 299  Q
    ||||||||||||||||||||||| ||||| ||||||||||   |||||||||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  9526216 aaatttcgtgccacgatgaagcctcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcagt-tagatttgtttcagttttttaagg 9526314  T
Q  300 gtttactttccactataaatataagccttatatcagatgataaagtgtgtagaaaaacagggtttagaaaccaacatacaaactagggtttatagagaat 399  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9526315 gtttactttccactataaatataagccttgtatcagatgataaagtgtgtagaaaaacagggtttagaaaccaacatacaaactagggtttatagagaat 9526414  T
Q  400 ttctcttggcaacaacactaaggttgggattgttctgattcaccttgaacaaagcactattaggattgagtctcttg 476  Q
    |||||||||||||||| ||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  9526415 ttctcttggcaacaactctagggttgggattgttttgattcaccttgaacaaagcactattaggattgagtctcttg 9526491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 101 - 476
Target Start/End: Original strand, 9521367 - 9521740
Alignment:
Q  101 tgtgacagttaacttaaaatcagaattctggagaatcgtgccacgatggagaaacatcgcgccacgattgttgaagtaagattctgaggaagctactgga 200  Q
    ||||| ||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||   |||||||||||||    
T  9521367 tgtgagagttaacttaaaatcagaaatctggagaatcgtgccacgatggagaagcatcgcgccacgattgttgaagcaagattcctgggaagctactgga 9521466  T
Q  201 aatttcgtgccacgatgaagccgcatcgtgccacgatggcatcgctgaagataaaaataaaacgtattttcagcatagatttgtttcagttttttaaggg 300  Q
    |||||||||||||||||   ||||||||||||| |||||   ||||||||||||||  |||||||||||||||  |||||||||||||||||||||||||    
T  9521467 aatttcgtgccacgatggccccgcatcgtgccaagatggtcgcgctgaagataaaataaaaacgtattttcag-ttagatttgtttcagttttttaaggg 9521565  T
Q  301 tttactttccactataaatataagccttatatcagatgat-aaagtgtgtagaaaaacagggtttagaaaccaacatacaaactagggtttatagagaat 399  Q
    |||||||| |||||||||||  |||||| ||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  9521566 tttacttt-cactataaata-cagccttgtatcagatgataaaagtgtgtagaaaaacaaggtttagaaaccaacatacaaactagggtttatagagaat 9521663  T
Q  400 ttctcttggcaacaacactaaggttgggattgttctgattcaccttgaacaaagcactattaggattgagtctcttg 476  Q
    ||||||||| ||||   ||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  9521664 ttctcttggtaacatttctagggttgggattgttttgattcaccttgaacaaagcactattaggattgagtctcttg 9521740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 107 - 476
Target Start/End: Complemental strand, 21353851 - 21353503
Alignment:
Q  107 agttaacttaaaatcagaattctggagaatcgtgccacgatggagaaacatcgcgccacgattgttgaagtaagattctgaggaagctactggaaatttc 206  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||| ||||    
T  21353851 agttaacttaaaatcagaaatctggagaatcgtgccacgatggagaagcatcgcgccacgattgttgaagcaagattctgaggaagctactggaattttc 21353752  T
Q  207 gtgccacgatgaagccgcatcgtgccacgatggcatcgctgaagataaaaa-taaaacgtattttcagcatagatttgtttcagttttttaagggtttac 305  Q
    |                     |||||||||||   ||||||||||||||| ||||||||||||||||  |||||||||||||||||||||||||||| |    
T  21353751 g---------------------tgccacgatgggcgcgctgaagataaaaaataaaacgtattttcagt-tagatttgtttcagttttttaagggttttc 21353674  T
Q  306 tttccactataaatataagccttatatcagatgataaagtgtgtagaaaaacagggtttagaaaccaacatacaaactagggtttatagagaatttctct 405  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  21353673 tttccactataaatataagccttgtatcagatgataaagtgtgtagaaaaacagggtttagaagccaacatacaaactagggtttatagagaatttctct 21353574  T
Q  406 tggcaacaacactaaggttgggattgttctgattcaccttgaacaaagcactattaggattgagtctcttg 476  Q
    ||| |||||||||| ||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||    
T  21353573 tggtaacaacactagggttgggattgttttgattcaccttgaacaacgcactattaggattgagtctcttg 21353503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 101 - 476
Target Start/End: Original strand, 2232262 - 2232622
Alignment:
Q  101 tgtgacagttaacttaaaatcagaattctggagaatcgtgccacgatggagaaacatcgcgccacgattgttgaagtaagattctgaggaagctactgga 200  Q
    ||||| ||||||||||||||||||| ||||||| ||| ||||||||||||||| |||||||||||||| ||||||| |||||||   |||||||||||||    
T  2232262 tgtgagagttaacttaaaatcagaaatctggagcatcatgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagctactgga 2232361  T
Q  201 aatttcgtgccacgatgaagccgcatcgtgccacgatggcatcgctgaagataaaaataaaacgtattttcagcatagatttgtttcagttttttaaggg 300  Q
    ||  ||||||||||||||||| |  ||  ||            ||||||||||||||||||||||||||||||  |||||||||||||||||| ||||||    
T  2232362 aaaatcgtgccacgatgaagcagggtctcgc------------gctgaagataaaaataaaacgtattttcagt-tagatttgtttcagttttataaggg 2232448  T
Q  301 tttactttccactataaatataagccttatatcagatgataaa-gtgtgtagaaaaacagggtttagaaaccaacatacaaactagggtttatagagaat 399  Q
    |||||||||||||||||||| | ||||| |||||||||||||| ||||||||||||||| ||||||||  |||||| |||||||||||||||||||||||    
T  2232449 tttactttccactataaataca-gccttgtatcagatgataaaagtgtgtagaaaaacaaggtttaga--ccaacaaacaaactagggtttatagagaat 2232545  T
Q  400 ttctcttggcaacaacactaaggttgggattgttctgattcaccttgaacaaagcactattaggattgagtctcttg 476  Q
     |||||||||||||||  || ||||||||||||| |||||||||||||||||| |||||||||||||||||||||||    
T  2232546 ctctcttggcaacaactttagggttgggattgttttgattcaccttgaacaaaacactattaggattgagtctcttg 2232622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 292 - 476
Target Start/End: Original strand, 25133914 - 25134096
Alignment:
Q  292 ttttaagggtttactttccactataaatataagccttatatcagatgataaagtgtgtagaaaaacagggtttagaaaccaacatacaaactagggttta 391  Q
    ||||||||||| ||||||||||||||||||||| ||| |||||||||||||| ||||||||||| |||||||||||| ||||||||||||||||||||||    
T  25133914 ttttaagggtt-actttccactataaatataagtcttgtatcagatgataaaatgtgtagaaaa-cagggtttagaagccaacatacaaactagggttta 25134011  T
Q  392 tagagaatttctcttggcaacaacactaaggttgggattgttctgattcaccttgaacaaagcactattaggattgagtctcttg 476  Q
    |||||||||||||||||||||||||||| ||||| ||||||| |||||||||||||||||| |||||||||||||||||||||||    
T  25134012 tagagaatttctcttggcaacaacactatggttgtgattgttttgattcaccttgaacaaatcactattaggattgagtctcttg 25134096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 101 - 476
Target Start/End: Complemental strand, 2393812 - 2393439
Alignment:
Q  101 tgtgacagttaacttaaaatcagaattctggagaatcgtgccacgatggagaaacatcgcgccacgattgttgaagtaagattctgaggaagct-actgg 199  Q
    ||||| ||||||||||||||||||| ||||||||||||||||||||||||||| | || ||||||||||||||||| |||||||| | ||   | ||||     
T  2393812 tgtgagagttaacttaaaatcagaaatctggagaatcgtgccacgatggagaagcttcacgccacgattgttgaagcaagattct-atgatcatcactgt 2393714  T
Q  200 aaatttcgtgccacgatgaagccgcatcgtgccacgatggcatcgctgaag-ataaaaataaaacgtatttt-cagcatagatttgtttcagttttttaa 297  Q
    |||  |||||||||| |  |  || |||||| |||||||| | |||| | | |||    | ||||||||||| |||   ||||||||| || | ||||||    
T  2393713 aaaaatcgtgccacggttgaatcgtatcgtggcacgatggta-cgctaatggatatttttgaaacgtatttttcagtgaagatttgttcca-tattttaa 2393616  T
Q  298 gggtttactttccactataaatataagccttatatcagatgataaagtgtgtagaaaaacagggtttagaaaccaacatacaaactagggtttatagaga 397  Q
    ||| | | ||||||||||||||||||||||| |||||||||| |||  | |||||||| || ||||||||| ||||||| ||||||| ||||||||||||    
T  2393615 gggat-attttccactataaatataagccttgtatcagatgaaaaacagagtagaaaa-caaggtttagaagccaacatgcaaactaaggtttatagaga 2393518  T
Q  398 atttctcttggcaacaacactaaggttgggattgttctgattcaccttgaacaaagcactattaggattgagtctcttg 476  Q
    |||||||||||||| ||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  2393517 atttctcttggcaataacactagggttgggattgttttgattcaccttgaacaaagcactattaggattgagtctcttg 2393439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 353 - 476
Target Start/End: Complemental strand, 4144963 - 4144840
Alignment:
Q  353 aaaacagggtttagaaaccaacatacaaactagggtttatagagaatttctcttggcaacaacactaaggttgggattgttctgattcaccttgaacaaa 452  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||| ||||| ||||||| ||||||||||||||||||    
T  4144963 aaaacagggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaaaaacactagggttgagattgttttgattcaccttgaacaaa 4144864  T
Q  453 gcactattaggattgagtctcttg 476  Q
     |||||||||||||||||||||||    
T  4144863 acactattaggattgagtctcttg 4144840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 305 - 476
Target Start/End: Complemental strand, 3091433 - 3091263
Alignment:
Q  305 ctttccactataaatataagccttatatcagatgataaagtgtgtagaaaaacagggtttagaaaccaacatacaaactagggtttatagagaatttctc 404  Q
    ||||||||||||||||||| |||| ||||||||||  | |||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||    
T  3091433 ctttccactataaatataa-ccttgtatcagatgaatatgtgtgtagaaaa-cagggtttagaagccaacatacaaactagggtttatagagaatttctc 3091336  T
Q  405 ttggcaac-aacactaaggttgggattgttctgattcaccttgaacaaagcactattaggattgagtctcttg 476  Q
    |||| ||| ||||||| ||||| ||||||| |||||||||||||||||| |||   |||||||||||||||||    
T  3091335 ttggtaacaaacactagggttgagattgttttgattcaccttgaacaaaacaccgctaggattgagtctcttg 3091263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 386 - 476
Target Start/End: Complemental strand, 2401468 - 2401378
Alignment:
Q  386 ggtttatagagaatttctcttggcaacaacactaaggttgggattgttctgattcaccttgaacaaagcactattaggattgagtctcttg 476  Q
    |||||||||||||||||||||||||||||||||| ||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  2401468 ggtttatagagaatttctcttggcaacaacactagggttgagattgttttgattcaccttgaacaaagcactattaggattgagtctcttg 2401378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 341 - 476
Target Start/End: Original strand, 14996931 - 14997065
Alignment:
Q  341 aaagtgtgtagaaaaacagggtttagaaaccaacatacaaactagggtttatagagaatttctcttggcaacaa-cactaaggttgggattgttctgatt 439  Q
    ||||||||||||||| |||||||||||| |||||| ||||||||||||||||| |||||| ||||||| || || ||||| ||||||||||||| | |||    
T  14996931 aaagtgtgtagaaaa-cagggtttagaagccaacaaacaaactagggtttataaagaatt-ctcttggtaataaacactagggttgggattgtttttatt 14997028  T
Q  440 caccttgaacaaagcactattaggattgagtctcttg 476  Q
    ||||||||||||| |||| ||||||||||||||||||    
T  14997029 caccttgaacaaaacactgttaggattgagtctcttg 14997065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 317 - 476
Target Start/End: Original strand, 46783010 - 46783168
Alignment:
Q  317 aatataagccttatatcagatgataaagtgtgtagaaaaacagggtttagaaaccaacatacaaactagggtttatagagaatttctcttggcaac-aac 415  Q
    ||||||| |||| |||||||||| || ||  ||||||||| ||||||||||| |||||| |||||||| ||||||||||||| || |||| ||||| |||    
T  46783010 aatataaaccttgtatcagatgaaaatgta-gtagaaaaatagggtttagaagccaacaaacaaactatggtttatagagaa-ttatctttgcaacaaac 46783107  T
Q  416 actaaggttgggattgttctgattcaccttgaacaaagcactattaggattgagtctcttg 476  Q
    |||| ||||| ||| ||| ||||||||||||||||||||||| ||||||| ||| ||||||    
T  46783108 actagggttgagatcgttttgattcaccttgaacaaagcactgttaggatagagactcttg 46783168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 101 - 186
Target Start/End: Original strand, 2617280 - 2617365
Alignment:
Q  101 tgtgacagttaacttaaaatcagaattctggagaatcgtgccacgatggagaaacatcgcgccacgattgttgaagtaagattctg 186  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||   ||| |||||||||||||||| || ||||||    
T  2617280 tgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatggagaagtttcgtgccacgattgttgaagcaaaattctg 2617365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 101 - 185
Target Start/End: Complemental strand, 2401726 - 2401642
Alignment:
Q  101 tgtgacagttaacttaaaatcagaattctggagaatcgtgccacgatggagaaacatcgcgccacgattgttgaagtaagattct 185  Q
    ||||| ||||||||||||||||||| ||||||||||||||||||||||||||| | |  ||||||||||||||||| ||||||||    
T  2401726 tgtgagagttaacttaaaatcagaaatctggagaatcgtgccacgatggagaagcttttcgccacgattgttgaagcaagattct 2401642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 101 - 172
Target Start/End: Complemental strand, 23689384 - 23689313
Alignment:
Q  101 tgtgacagttaacttaaaatcagaattctggagaatcgtgccacgatggagaaacatcgcgccacgattgtt 172  Q
    ||||| |||||||||||||||| || ||| ||||||| ||||||||||||||| ||||||||||||||||||    
T  23689384 tgtgagagttaacttaaaatcaaaaatctagagaatcatgccacgatggagaagcatcgcgccacgattgtt 23689313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 101 - 182
Target Start/End: Original strand, 25133681 - 25133762
Alignment:
Q  101 tgtgacagttaacttaaaatcagaattctggagaatcgtgccacgatggagaaacatcgcgccacgattgttgaagtaagat 182  Q
    ||||| ||||||||||||||||| | ||||||||| |||| |||||||||||| || || |||||||||||||||| |||||    
T  25133681 tgtgagagttaacttaaaatcaggaatctggagaaacgtgtcacgatggagaagcaacgtgccacgattgttgaagcaagat 25133762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 249 - 335
Target Start/End: Complemental strand, 13449941 - 13449856
Alignment:
Q  249 agataaaaataaaacgtattttcagcatagatttgtttcagttttttaagggtttactttccactataaatataagccttatatcag 335  Q
    |||||||||||||||||||||| |    |||||||||||||||||||||||| | ||||| |||||||||||||  |||| ||||||    
T  13449941 agataaaaataaaacgtatttttattgaagatttgtttcagttttttaagggataacttt-cactataaatatagaccttgtatcag 13449856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 246 - 336
Target Start/End: Original strand, 2617403 - 2617490
Alignment:
Q  246 tgaagataaaaataaaacgtattttcagcatagatttgtttcagttttttaagggtttactttccactataaatataagccttatatcaga 336  Q
    ||||||||||||||||||||||||| |    |||||||||||||||||||||||| |  |||| |||||||||||||  |||| |||||||    
T  2617403 tgaagataaaaataaaacgtatttttattgaagatttgtttcagttttttaagggat--cttt-cactataaatatagaccttgtatcaga 2617490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 303 - 339
Target Start/End: Complemental strand, 2401525 - 2401489
Alignment:
Q  303 tactttccactataaatataagccttatatcagatga 339  Q
    |||||||||||||||||||||||||| ||||||||||    
T  2401525 tactttccactataaatataagccttgtatcagatga 2401489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 101 - 149
Target Start/End: Original strand, 20291280 - 20291328
Alignment:
Q  101 tgtgacagttaacttaaaatcagaattctggagaatcgtgccacgatgg 149  Q
    ||||| |||||||||||||||||| ||||| ||||||||| ||||||||    
T  20291280 tgtgagagttaacttaaaatcagatttctgcagaatcgtggcacgatgg 20291328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 305 - 354
Target Start/End: Complemental strand, 4145028 - 4144979
Alignment:
Q  305 ctttccactataaatataagccttatatcagatgataaagtgtgtagaaa 354  Q
    ||||||||||||||||||| |||| ||||||||||| | || ||||||||    
T  4145028 ctttccactataaatataaaccttgtatcagatgattatgtatgtagaaa 4144979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 101 - 149
Target Start/End: Original strand, 6822775 - 6822823
Alignment:
Q  101 tgtgacagttaacttaaaatcagaattctggagaatcgtgccacgatgg 149  Q
    ||||| |||||||||||||||||  ||||| ||||||||| ||||||||    
T  6822775 tgtgagagttaacttaaaatcaggtttctgcagaatcgtggcacgatgg 6822823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 101 - 149
Target Start/End: Original strand, 13761577 - 13761625
Alignment:
Q  101 tgtgacagttaacttaaaatcagaattctggagaatcgtgccacgatgg 149  Q
    ||||| |||||||||||||||||  ||||| ||||||||| ||||||||    
T  13761577 tgtgagagttaacttaaaatcaggtttctgcagaatcgtggcacgatgg 13761625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 101 - 149
Target Start/End: Original strand, 51752104 - 51752152
Alignment:
Q  101 tgtgacagttaacttaaaatcagaattctggagaatcgtgccacgatgg 149  Q
    ||||| |||||||||||||||||  ||||| ||||||||| ||||||||    
T  51752104 tgtgagagttaacttaaaatcaggtttctgcagaatcgtggcacgatgg 51752152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 257; Significance: 1e-143; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 257; E-Value: 1e-143
Query Start/End: Original strand, 100 - 476
Target Start/End: Complemental strand, 188754 - 188399
Alignment:
Q  100 gtgtgacagttaacttaaaatcagaattctggagaatcgtgccacgatggagaaacatcgcgccacgattgttgaagtaagattctgaggaagctactgg 199  Q
    |||||| |||||||||||||| |||| ||||||||||||||| ||||||||||| |||||||||||||||||||||| |||||| ||||||| ||||| |    
T  188754 gtgtgagagttaacttaaaattagaaatctggagaatcgtgctacgatggagaagcatcgcgccacgattgttgaagcaagattatgaggaaactactag 188655  T
Q  200 aaatttcgtgccacgatgaagccgcatcgtgccacgatggcatcgctgaagataaaaataaaacgtattttcagcatagatttgtttcagttttttaagg 299  Q
    ||||||||                     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  188654 aaatttcg---------------------tgccacgatggcatcgctgaagataaaaataaaacgtattttcagcatagatttgtttcagttttttaagg 188576  T
Q  300 gtttactttccactataaatataagccttatatcagatgataaagtgtgtagaaaaacagggtttagaaaccaacatacaaactagggtttatagagaat 399  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  188575 gtttactttccactataaatataagccttgtatcagatgataaagtgtgtagaaaaacagggtttagaaaccaacatacaaactagggtttatagagaat 188476  T
Q  400 ttctcttggcaacaacactaaggttgggattgttctgattcaccttgaacaaagcactattaggattgagtctcttg 476  Q
    |||||||||||||||||||| ||||||||||||| |||||||||||||||||| |||||||||||||||||||||||    
T  188475 ttctcttggcaacaacactagggttgggattgttttgattcaccttgaacaaaacactattaggattgagtctcttg 188399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 257; Significance: 1e-143; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 257; E-Value: 1e-143
Query Start/End: Original strand, 101 - 476
Target Start/End: Original strand, 25452146 - 25452520
Alignment:
Q  101 tgtgacagttaacttaaaatcagaattctggagaatcgtgccacgatggagaaacatcgcgccacgattgttgaagtaagattctgaggaagctactgga 200  Q
    ||||| |||||||||||||| |||| | ||||||||||||||||||||||||| |||||||||||||||| ||||| |||||||   |||||||||||||    
T  25452146 tgtgagagttaacttaaaattagaaatatggagaatcgtgccacgatggagaagcatcgcgccacgattgatgaagcaagattcctgggaagctactgga 25452245  T
Q  201 aatttcgtgccacgatgaagccgcatcgtgccacgatggcatcgctgaagataaaaataaaacgtattttcagcatagatttgtttcagttttttaaggg 300  Q
    |||||||||||||||||||||||  ||||||||||||||   |||||||||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  25452246 aatttcgtgccacgatgaagccgtgtcgtgccacgatggtcgcgctgaagataaaaataaaacgtattttcagt-tagatttgtttcagttttttaaggg 25452344  T
Q  301 tttactttccactataaatataagccttatatcagatgataaa-gtgtgtagaaaaacagggtttagaaaccaacatacaaactagggtttatagagaat 399  Q
    |||||||||||||||||||| | ||||| ||| |||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  25452345 tttactttccactataaataca-gccttgtattagatgataaaagtgtgtagaaaaacaaggtttagaaaccaacatacaaactagggtttatagagaat 25452443  T
Q  400 ttctcttggcaacaacactaaggttgggattgttctgattcaccttgaacaaagcactattaggattgagtctcttg 476  Q
    |||||||||||||||| |||  |||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  25452444 ttctcttggcaacaactctagcgttgggattgttttgattcaccttgaacaaagcactattaggattgagtctcttg 25452520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 228; E-Value: 1e-125
Query Start/End: Original strand, 101 - 476
Target Start/End: Complemental strand, 2298528 - 2298158
Alignment:
Q  101 tgtgacagttaacttaaaatcagaattctggagaatcgtgccacgatggagaaacatcgcgccacgattgttgaagtaagattctgaggaagctactgga 200  Q
    ||||| ||||||||||||||||||| ||||||| ||||||||||||||||||| ||||||||||||| |||||||| |||||||||||||||||||||||    
T  2298528 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgactgttgaagcaagattctgaggaagctactgga 2298429  T
Q  201 aatttcgtgccacgatgaagccgcatcgtgccacgatggcatcgctgaagataaaaataaaacgtattttcagcatagatttgtttcagttttttaaggg 300  Q
    ||  |||| ||| ||| ||||||  ||||||||||||||   |||||||||||    ||||||||||||||||  ||||||||||| |||||||||||||    
T  2298428 aaaatcgtaccatgataaagccgtgtcgtgccacgatggtcgcgctgaagata----taaaacgtattttcagt-tagatttgttttagttttttaaggg 2298334  T
Q  301 tttactttccactataaatataagccttatatcagatgataaa-gtgtgtagaaaaacagggtttagaaaccaacatacaaactagggtttatagagaat 399  Q
    |||||||||||||||||||| | ||||| ||||| |||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  2298333 tttactttccactataaataca-gccttgtatcatatgataaaagtgtgtagaaaaacaaggtttagaaaccaacatacaaactagggtttatagagaat 2298235  T
Q  400 ttctcttggcaacaacactaaggttgggattgttctgattcaccttgaacaaagcactattaggattgagtctcttg 476  Q
     ||||||||||||||| ||| ||||||||||||| |||||||||||||||||| |||||||||||||||||||||||    
T  2298234 ctctcttggcaacaactctagggttgggattgttttgattcaccttgaacaaaacactattaggattgagtctcttg 2298158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 101 - 476
Target Start/End: Original strand, 22672504 - 22672859
Alignment:
Q  101 tgtgacagttaacttaaaatcagaattctggagaatcgtgccacgatggagaaacatcgcgccacgattgttgaagtaagattctgaggaagctactgga 200  Q
    ||||| |||||||||||||| ||||||||||||||||||||||||||||| || ||| ||||||| |||||||||| |||||||||||| || |||||||    
T  22672504 tgtgagagttaacttaaaattagaattctggagaatcgtgccacgatggaaaagcattgcgccacaattgttgaagcaagattctgagggagttactgga 22672603  T
Q  201 aatttcgtgccacgatgaagccgcatcgtgccacgatggcatcgctgaagataaaaataaaacgtattttcagcatagatttgtttcagtttt--ttaag 298  Q
    |||||||                     |||||||||||   |||||||||||||||||||| ||||||||||  ||||||||||||||||||  |||||    
T  22672604 aatttcg---------------------tgccacgatggtcgcgctgaagataaaaataaaatgtattttcagt-tagatttgtttcagttttttttaag 22672681  T
Q  299 ggtttactttccactataaatataagccttatatcagatgataaagtgtgtagaaaaacagggtttagaaaccaacatacaaactagggtttatagagaa 398  Q
    |||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22672682 ggtttactttccactataaatagaagccttgtatcagatgataaagtgtgtagaaaaacagggtttagaaaccaacatacaaactagggtttatagagaa 22672781  T
Q  399 tttctcttggcaacaacactaaggttgggattgttctgattcaccttgaacaaagcactattaggattgagtctcttg 476  Q
    ||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  22672782 tttctcttggcaacaacactagggttgggattgttttgattcaccttgaacaaagcactattaggattgagtctcttg 22672859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 107 - 476
Target Start/End: Original strand, 1170470 - 1170836
Alignment:
Q  107 agttaacttaaaatcagaattctggagaatcgtgccacgatggagaaacatcgcgccacgattgttgaagtaagattctgaggaagctactggaaatttc 206  Q
    ||||||||||||||||||| ||||||| ||||||||||||||||||| ||||||||||| || | ||||| |||||||   || ||  |||| |||||||    
T  1170470 agttaacttaaaatcagaaatctggagcatcgtgccacgatggagaagcatcgcgccacaatggctgaagcaagattcctgggcagacactgaaaatttc 1170569  T
Q  207 gtgccacgatgaagccgcatcgtgccacgatggcatcgctgaagataaaaataaaacgtattttcagcatagatttgtttcagttttttaagggtttact 306  Q
    |||||||||||||||| ||||| ||||||||||   |||||||||||||||||||||||||||||||  |||||||||||||||||| ||||||||||||    
T  1170570 gtgccacgatgaagcctcatcgcgccacgatggtcgcgctgaagataaaaataaaacgtattttcagt-tagatttgtttcagttttataagggtttact 1170668  T
Q  307 ttccactataaatataagccttatatcagatgataaa-gtgtgtagaaaaacagggtttagaaaccaacatacaaactagggtttatagagaatttctct 405  Q
    ||| |||||||||||| ||||| |||||||||||||| ||||||||||||||| ||||||||  |||||| ||||||||||||||||||||||| |||||    
T  1170669 ttctactataaatata-gccttgtatcagatgataaaagtgtgtagaaaaacaaggtttaga--ccaacaaacaaactagggtttatagagaatctctct 1170765  T
Q  406 tggcaacaacactaaggttgggattgttctgattcaccttgaacaaagcactattaggattgagtctcttg 476  Q
    |||||||||| ||| ||||||||||||| |||||||||||||||||| |||||||||||||||||||||||    
T  1170766 tggcaacaactctagggttgggattgttttgattcaccttgaacaaaacactattaggattgagtctcttg 1170836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 101 - 475
Target Start/End: Original strand, 1240078 - 1240452
Alignment:
Q  101 tgtgacagttaacttaaaatcagaattctggagaatcgtgccacgatggagaaacatcgcgccacgattgttgaagtaagattctg-aggaagctactgg 199  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||| | ||| |||||||||||||||| || |||||| || || | |||||    
T  1240078 tgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatggagaagcttcgtgccacgattgttgaagcaaaattctggagcaatc-actgg 1240176  T
Q  200 aaatttcgtgccacgatgaagccgcatcgtgccacgatggcatcgctgaagataaaaataaaacgtattttcagcatagatttgtttcagttttttaagg 299  Q
    |||  ||||||||||||     || |||||||||||||||      ||||||||||||||||||||||||| |    | ||||||||||||||||||||     
T  1240177 aaaaatcgtgccacgattggatcgaatcgtgccacgatggtgcaattgaagataaaaataaaacgtatttttattgaacatttgtttcagttttttaaga 1240276  T
Q  300 gtttactttccactataaatataagccttatatcagatgataaagtgtgtagaaaaacagggtttagaaaccaacatacaaactagggtttatagagaat 399  Q
    | |||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| | |    
T  1240277 ggttactttctactataaatataagccttgtatcagatgataaagtgtgtagaaaaacagggtttagaagccaacatacaaactagggtttatagatatt 1240376  T
Q  400 ttctcttggcaacaacactaaggttgggattgttctgattcaccttgaacaaagcactattaggattgagtctctt 475  Q
    ||||||| |||||||||||| ||||||||||||| |||||||||||||||||| ||||||||||||||||||||||    
T  1240377 ttctctttgcaacaacactagggttgggattgttttgattcaccttgaacaaaacactattaggattgagtctctt 1240452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 101 - 476
Target Start/End: Original strand, 40222414 - 40222788
Alignment:
Q  101 tgtgacagttaacttaaaatcagaattctggagaatcgtgccacgatggagaaacatcgcgccacgattgttgaagtaagattctgaggaagctactgga 200  Q
    ||||| ||||||||||||||||||| ||||||||||||||||||||||||||| || || |||||||||||||||| |||||||||| | ||  || |||    
T  40222414 tgtgagagttaacttaaaatcagaaatctggagaatcgtgccacgatggagaagcaacgtgccacgattgttgaagcaagattctgaagcagtcacagga 40222513  T
Q  201 aatttcgtgccacgatgaagccgcatcgtgccacgatggcatcgctgaagataaaaataaaacgtattttcagcatagatttgtttcagttttttaaggg 300  Q
    ||  |||||||||||||||  |||| |||| |||||||| |    ||| |||||||  ||||||| |||||||   | |||||||||| |||||||| ||    
T  40222514 aaaatcgtgccacgatgaaatcgcaacgtggcacgatggtacgattgaggataaaataaaaacgtgttttcagtgaaaatttgtttcaattttttaaagg 40222613  T
Q  301 tttactttccactataaatataagccttatatcagatgataaagtgtgtagaaaaacagggtttagaaaccaacatacaaactagggtttatagagaatt 400  Q
     |||||||| |||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||    
T  40222614 attactttc-actataaatataagccttgtatcagatgataaagtgtgtagaaaaacaaggtttagaagccaacatacaaactagggtttatagagaatt 40222712  T
Q  401 tctcttggcaacaacactaaggttgggattgttctgattcaccttgaacaaagcactattaggattgagtctcttg 476  Q
    ||||||||||||||||||| ||||| ||||||| ||||||||||||||||||| | ||||||||||||||||||||    
T  40222713 tctcttggcaacaacactagggttgagattgttttgattcaccttgaacaaagtattattaggattgagtctcttg 40222788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 101 - 476
Target Start/End: Complemental strand, 35385962 - 35385609
Alignment:
Q  101 tgtgacagttaacttaaaatcagaattctggagaatcgtgccacgatggagaaacatcgcgccacgattgttgaagtaagattctgaggaagctactgga 200  Q
    ||||| ||||||||||||||||||| ||| ||| ||||||||||||||||||| |||||||||||||||||||||| |||||||   |||||||||||||    
T  35385962 tgtgagagttaacttaaaatcagaaatctagagtatcgtgccacgatggagaagcatcgcgccacgattgttgaagcaagattcctgggaagctactgga 35385863  T
Q  201 aatttcgtgccacgatgaagccgcatcgtgccacgatggcatcgctgaagataaaaataaaacgtattttcagcatagatttgtttcagttttttaaggg 300  Q
    |||||||                     |||||||||||   |||| ||||||||||||||| ||||||||||  | |||||||||||||||||||||||    
T  35385862 aatttcg---------------------tgccacgatggtcgcgctaaagataaaaataaaaagtattttcagttt-gatttgtttcagttttttaaggg 35385785  T
Q  301 tttactttccactataaatataagccttatatcagatgataaagtgtgtagaaaaacagggtttagaaaccaacatacaaactagggtttatagagaatt 400  Q
    |||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||  |||||||||| |||||||||||||||||||||||||||||    
T  35385784 tttactttccactataaatataagccttgtatcaaatgataaagtgtgtagaaaaacaaagtttagaaactaacatacaaactagggtttatagagaatt 35385685  T
Q  401 tctcttggcaacaacactaaggttgggattgttctgattcaccttgaacaaagcactattaggattgagtctcttg 476  Q
    ||||||||||||||| ||| ||||||||||||| |||||||||||||||||| |||||||||||||||||||||||    
T  35385684 tctcttggcaacaactctagggttgggattgttttgattcaccttgaacaaaacactattaggattgagtctcttg 35385609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 101 - 446
Target Start/End: Original strand, 42237954 - 42238298
Alignment:
Q  101 tgtgacagttaacttaaaatcagaattctggagaatcgtgccacgatggagaaacatcgcgccacgattgttgaagtaagattctgaggaagctactgga 200  Q
    ||||| ||||||||||||||||||| ||||||||||||||||||||||||||| || || |||||||||||||||| |||||| ||| | ||  ||||||    
T  42237954 tgtgagagttaacttaaaatcagaaatctggagaatcgtgccacgatggagaagcaacgtgccacgattgttgaagcaagattttgaagcagtcactgga 42238053  T
Q  201 aatttcgtgccacgatgaagccgcatcgtgccacgatggcatcgctgaagataaaaataaaacgtattttcagcatagatttgtttcagttttttaaggg 300  Q
    ||  |||||||||||||||  |||| |||| ||||||||      ||| |||||||  |||||||||||||||   |||||||||||| |||||||| ||    
T  42238054 aaaatcgtgccacgatgaaatcgcaacgtggcacgatggtgcgattgaggataaaacaaaaacgtattttcagtgaagatttgtttcaattttttaaagg 42238153  T
Q  301 tttactttccactataaatataagccttatatcagatgataaagtgtgtagaaaaacagggtttagaaaccaacatacaaactagggtttatagagaatt 400  Q
     |||||||||||||||||||||| |||| ||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  42238154 gttactttccactataaatataaaccttgtatca-atgataaagtgtgtagaaaaacagggtttagaagccaacatacaaactagggtttatagagaatt 42238252  T
Q  401 tctcttggcaacaacactaaggttgggattgttctgattcaccttg 446  Q
    |||||| |||||||||||| ||||||||||||| ||||||||||||    
T  42238253 tctctttgcaacaacactagggttgggattgttttgattcaccttg 42238298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 263 - 476
Target Start/End: Original strand, 25445305 - 25445521
Alignment:
Q  263 cgtattttcagcatagatttgtttcagttttttaagggtttactttccactataaatataagccttatatcagatgataaa-gtgtgtagaaaaacaggg 361  Q
    |||||||||||  |||||||||||||||||||||||||||||| |||||||||||||| | | ||| |||||||||||||| ||||||||| ||||| ||    
T  25445305 cgtattttcagt-tagatttgtttcagttttttaagggtttaccttccactataaataca-gtcttgtatcagatgataaaagtgtgtagataaacaagg 25445402  T
Q  362 tttagaaaccaacatacaaactagggtttatagagaatttctcttggcaacaacactaaggttgggattgttctgattcaccttgaacaaagca----ct 457  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| |||||||||||||||||| ||    ||    
T  25445403 tttagaaaccaacatacaaactagggtttatagagaatttctcttggcaacaactctagggttgggattgttttgattcaccttgaacaaaacactatct 25445502  T
Q  458 attaggattgagtctcttg 476  Q
    |||||||||||||||||||    
T  25445503 attaggattgagtctcttg 25445521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 292 - 474
Target Start/End: Complemental strand, 17841589 - 17841408
Alignment:
Q  292 ttttaagggtttactttccactataaatataagccttatatcagatgataaagtgtgtagaaaaacagggtttagaaaccaacatacaaactagggttta 391  Q
    ||||||||||| | ||||||||||||||||||||||| |||| |||||||||||| |||||||| |||||||||||||||| ||||||||||||||||||    
T  17841589 ttttaagggttaa-tttccactataaatataagccttgtatcggatgataaagtgcgtagaaaa-cagggtttagaaaccatcatacaaactagggttta 17841492  T
Q  392 tagagaatttctcttggc-aacaacactaaggttgggattgttctgattcaccttgaacaaagcactattaggattgagtctct 474  Q
    |||||||||||||||||| ||||| |||| ||||| ||||||| ||||||||||||||||||||||||||||||||||||||||    
T  17841491 tagagaatttctcttggcaaacaatactagggttgagattgttttgattcaccttgaacaaagcactattaggattgagtctct 17841408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 305 - 476
Target Start/End: Complemental strand, 11962759 - 11962590
Alignment:
Q  305 ctttccactataaatataagccttatatcagatgataaagtgtgtagaaaaacagggtttagaaaccaacatacaaactagggtttatagagaatttctc 404  Q
    ||||||||||||||||||| |||| ||||| |||| | | ||||||||||| |||||||||||| ||||||||||||||| |||| ||||||||||||||    
T  11962759 ctttccactataaatataaaccttgtatcatatga-atattgtgtagaaaa-cagggtttagaagccaacatacaaactatggttcatagagaatttctc 11962662  T
Q  405 ttggcaacaacactaaggttgggattgttctgattcaccttgaacaaagcactattaggattgagtctcttg 476  Q
    ||||||||||||||| ||||| ||||||| ||||||||| ||||||||||||||||||||||| ||||||||    
T  11962661 ttggcaacaacactagggttgagattgttttgattcaccatgaacaaagcactattaggattgtgtctcttg 11962590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 305 - 476
Target Start/End: Original strand, 10627217 - 10627389
Alignment:
Q  305 ctttccactataaatataagccttatatcagatgataaagtgtgtagaaaaacagggtttagaaaccaacatacaaactagggtttatagagaatttctc 404  Q
    |||||||||||||||||||||||| |||||||| || | |||||||||||| |||||||||||| |||||||||||||||| ||||||||||||||||||    
T  10627217 ctttccactataaatataagccttgtatcagattattatgtgtgtagaaaa-cagggtttagaagccaacatacaaactagtgtttatagagaatttctc 10627315  T
Q  405 ttggcaac-aacactaaggttgggattg-ttctgattcaccttgaacaaagcactattaggattgagtctcttg 476  Q
    || ||||| ||||||| |||| |||||| || |||||||||||||||||| |||| ||||||||||||||||||    
T  10627316 ttagcaacaaacactagggttaggattgtttttgattcaccttgaacaaaacactgttaggattgagtctcttg 10627389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 353 - 476
Target Start/End: Complemental strand, 31782738 - 31782614
Alignment:
Q  353 aaaacagggtttagaaaccaacatacaaactagggtttatagagaatttctcttggcaac-aacactaaggttgggattgttctgattcaccttgaacaa 451  Q
    |||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||| ||||||| ||||||||||||| |||||||||||||||||    
T  31782738 aaaacagggtttagaagccaacatacaaactagggtttatagataatttctcttggcaacaaacactagggttgggattgttttgattcaccttgaacaa 31782639  T
Q  452 agcactattaggattgagtctcttg 476  Q
    | |||| ||||||||||||||||||    
T  31782638 aacactgttaggattgagtctcttg 31782614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 306 - 476
Target Start/End: Complemental strand, 16093617 - 16093448
Alignment:
Q  306 tttccactataaatataagccttatatcagatgataaagtgtgtagaaaaacagggtttagaaaccaacatacaaactagggtttatagagaatttctct 405  Q
    |||||||||||||||||  |||| ||||| || || | |||||||||||| |||||||||||| |||||||||||||||||||||||||| |||||||||    
T  16093617 tttccactataaatatataccttgtatcaaataattatgtgtgtagaaaa-cagggtttagaagccaacatacaaactagggtttatagataatttctct 16093519  T
Q  406 tggcaac-aacactaaggttgggattgttctgattcaccttgaacaaagcactattaggattgagtctcttg 476  Q
    ||||||| ||||||| |||||||||  || |||||||||||||| ||| |||||||||||||||||||||||    
T  16093518 tggcaacaaacactagggttgggatctttttgattcaccttgaa-aaaacactattaggattgagtctcttg 16093448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 310 - 476
Target Start/End: Complemental strand, 26406795 - 26406630
Alignment:
Q  310 cactataaatataagccttatatcagatgataaagtgtgtagaaaaacagggtttagaaaccaacatacaaactagggtttatagagaatttctcttggc 409  Q
    ||||||||||| || |||| ||||| |||| || |||||||||||| ||||||||||||||||||| |||||||||||||||||||||| ||||||||||    
T  26406795 cactataaatagaaaccttgtatcatatgaaaatgtgtgtagaaaa-cagggtttagaaaccaacaaacaaactagggtttatagagaa-ttctcttggc 26406698  T
Q  410 aac-aacactaaggttgggattgttctgattcaccttgaacaaagcactattaggattgagtctcttg 476  Q
    ||| ||||||| ||||| ||||||| |||||||||||||||||| || | ||||||||||||||||||    
T  26406697 aacaaacactagggttgagattgttttgattcaccttgaacaaaacattgttaggattgagtctcttg 26406630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 100 - 336
Target Start/End: Original strand, 6744800 - 6745035
Alignment:
Q  100 gtgtgacagttaacttaaaatcagaattctggagaatcgtgccacgatggagaaacatcgcgccacgattgttgaagtaagattct-gaggaagctactg 198  Q
    |||||| |||||| |||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| || ||||| ||| || | ||||    
T  6744800 gtgtgagagttaatttaaaatcagaattctggagaatcgtgccacgatggagaaacttcgtgccacgattgttgaagcaaaattctggagcaatc-actg 6744898  T
Q  199 gaaatttcgtgccacgatgaagccgcatcgtgccacgatggcatcgctgaagataaaaataaaacgtattttcagcatagatttgtttcagttttttaag 298  Q
    ||||  ||||||||||||     || ||||||| |||||||      ||||||||||||||||||||||||| | |  ||||||||||||||||||||||    
T  6744899 gaaaaatcgtgccacgattggatcgaatcgtgctacgatggtgcgattgaagataaaaataaaacgtatttttatcgaagatttgtttcagttttttaag 6744998  T
Q  299 ggtttactttccactataaatataagccttatatcaga 336  Q
    || ||||||| |||||||||||||  |||| |||||||    
T  6744999 ggattacttt-cactataaatatagaccttgtatcaga 6745035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 101 - 336
Target Start/End: Original strand, 6747044 - 6747278
Alignment:
Q  101 tgtgacagttaacttaaaatcagaattctggagaatcgtgccacgatggagaaacatcgcgccacgattgttgaagtaagattct-gaggaagctactgg 199  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||| | ||| |||||||||||||||| || ||||| ||| || | |||||    
T  6747044 tgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatggagaagcttcgtgccacgattgttgaagcaaaattctggagcaatc-actgg 6747142  T
Q  200 aaatttcgtgccacgatgaagccgcatcgtgccacgatggcatcgctgaagataaaaataaaacgtattttcagcatagatttgtttcagttttttaagg 299  Q
    |||  ||||||||||||     || |||||||||||||||      ||||||||||||||||||||||||| |    |||||||||||||||||||||||    
T  6747143 aaaagtcgtgccacgattggatcgaatcgtgccacgatggtgcgattgaagataaaaataaaacgtatttttattgaagatttgtttcagttttttaagg 6747242  T
Q  300 gtttactttccactataaatataagccttatatcaga 336  Q
    | ||||||| |||||||||||||  |||| |||||||    
T  6747243 gattacttt-cactataaatatagaccttgtatcaga 6747278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 100 - 336
Target Start/End: Complemental strand, 10529639 - 10529404
Alignment:
Q  100 gtgtgacagttaacttaaaatcagaattctggagaatcgtgccacgatggagaaacatcgcgccacgattgttgaagtaagattct-gaggaagctactg 198  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||| ||||| | ||| |||||||||||||||| || ||||| ||| || | ||||    
T  10529639 gtgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatcgagaagcttcgtgccacgattgttgaagcaaaattctagagcaatc-actg 10529541  T
Q  199 gaaatttcgtgccacgatgaagccgcatcgtgccacgatggcatcgctgaagataaaaataaaacgtattttcagcatagatttgtttcagttttttaag 298  Q
    ||||  |||||||||||| |   || ||||||||||||||       ||||||||||||||||||||||||| |    |||||| |||||||||||||||    
T  10529540 gaaaaatcgtgccacgattagatcgaatcgtgccacgatgatgcgattgaagataaaaataaaacgtatttttattgaagatttatttcagttttttaag 10529441  T
Q  299 ggtttactttccactataaatataagccttatatcaga 336  Q
    || ||||||| |||||||||||||  |||| |||||||    
T  10529440 ggattacttt-cactataaatatagaccttgtatcaga 10529404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 334 - 476
Target Start/End: Original strand, 28786289 - 28786429
Alignment:
Q  334 agatgataaagtgtgtagaaaaacagggtttagaaaccaacatacaaactagggtttatagagaatttctcttggcaacaacactaaggttgggattgtt 433  Q
    |||||| || ||| ||||||||||||| |||||||  |||||||||||| |||||| ||| |||| |||||||| ||||||||||| |||||| ||||||    
T  28786289 agatgaaaaggtgcgtagaaaaacaggatttagaaggcaacatacaaacaagggtt-ataaagaacttctcttg-caacaacactagggttggaattgtt 28786386  T
Q  434 ctgattcaccttgaacaaagcactattaggattgagtctcttg 476  Q
     ||||||||||||||||||||||||||||||||||||||||||    
T  28786387 ttgattcaccttgaacaaagcactattaggattgagtctcttg 28786429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 101 - 336
Target Start/End: Original strand, 4409797 - 4410031
Alignment:
Q  101 tgtgacagttaacttaaaatcagaattctggagaatcgtgccacgatggagaaacatcgcgccacgattgttgaagtaagattct-gaggaagctactgg 199  Q
    ||||| |||||||||||||||||| ||||| ||||||||||||||||| |||| | ||| |||||||||||||||| || ||||| ||| || | |||||    
T  4409797 tgtgaaagttaacttaaaatcagagttctgaagaatcgtgccacgatgaagaagcttcgtgccacgattgttgaagcaaaattctggagcaatc-actgg 4409895  T
Q  200 aaatttcgtgccacgatgaagccgcatcgtgccacgatggcatcgct-gaagataaaaataaaacgtattttcagcatagatttgtttcagttttttaag 298  Q
    |||  ||||||||| ||     || |||||||||||||||   || | | |||||||||||||||||||||| |    ||||||||||||||||||||||    
T  4409896 aaaaatcgtgccacaattggatcgaatcgtgccacgatgg-tgcgatggcagataaaaataaaacgtatttttattgaagatttgtttcagttttttaag 4409994  T
Q  299 ggtttactttccactataaatataagccttatatcaga 336  Q
    || ||||||| |||||||||||||  |||| |||||||    
T  4409995 ggattacttt-cactataaatatagaccttgtatcaga 4410031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 313 - 476
Target Start/End: Original strand, 25837970 - 25838132
Alignment:
Q  313 tataaatataagccttatatcagatgataaagtgtgtagaaaaacagggtttagaaaccaacatacaaactagggtttatagagaatttctcttggcaac 412  Q
    ||||||| ||| | || ||||| |||| || |||||||||||| || ||||||||| |||||| | |||||| ||||||||||||||| ||||||| |||    
T  25837970 tataaatttaaactttgtatcatatgaaaacgtgtgtagaaaa-caaggtttagaagccaacaaagaaactatggtttatagagaatt-ctcttggtaac 25838067  T
Q  413 aa-cactaaggttgggattgttctgattcaccttgaacaaagcactattaggattgagtctcttg 476  Q
    || ||||| ||||| ||||||| |||||||||||||||||| |||||||||||  ||||||||||    
T  25838068 aaacactagggttgagattgttttgattcaccttgaacaaaacactattaggagagagtctcttg 25838132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 107 - 336
Target Start/End: Original strand, 39854230 - 39854458
Alignment:
Q  107 agttaacttaaaatcagaattctggagaatcgtgccacgatggagaaacatcgcgccacgattgttgaagtaagattctg-aggaagctactggaaattt 205  Q
    |||||||||||||| ||||||||||||||||||| || ||| |||||   ||| |||||||||||||||| || |||||| || || | ||||||||  |    
T  39854230 agttaacttaaaattagaattctggagaatcgtgtcatgatagagaagtttcgtgccacgattgttgaagcaaaattctggagcaatc-actggaaaaat 39854328  T
Q  206 cgtgccacgatgaagccgcatcgtgccacgatggcatcgctgaagataaaaataaaacgtattttcagcatagatttgtttcagttttttaagggtttac 305  Q
    |||| |||| |  |  ||||||||| ||||||||      ||||||||||||||||||||||||| |    |||||||||||||||||||||||| ||||    
T  39854329 cgtgtcacggttgaatcgcatcgtggcacgatggtgcgattgaagataaaaataaaacgtatttttattgaagatttgtttcagttttttaagggattac 39854428  T
Q  306 tttccactataaatataagccttatatcaga 336  Q
    ||| |||||||||||||  |||| |||||||    
T  39854429 ttt-cactataaatatagaccttgtatcaga 39854458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 101 - 184
Target Start/End: Original strand, 25445219 - 25445302
Alignment:
Q  101 tgtgacagttaacttaaaatcagaattctggagaatcgtgccacgatggagaaacatcgcgccacgattgttgaagtaagattc 184  Q
    ||||| |||||||||||||| |||| ||||||||||||| ||| ||||||||| |||||||||||||||| ||||| |||||||    
T  25445219 tgtgagagttaacttaaaattagaaatctggagaatcgtaccatgatggagaagcatcgcgccacgattgatgaagcaagattc 25445302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 330 - 466
Target Start/End: Complemental strand, 25562592 - 25562458
Alignment:
Q  330 tatcagatgataaagtgtgtagaaaaacagggtttagaaaccaacatacaaactagggtttatagagaatttctcttggcaacaacactaagg-ttggga 428  Q
    |||||||||| || ||||||||||||  |||  ||||||||||||||||||| |||| |||||||| ||||||| |||| |||||   | ||| ||| ||    
T  25562592 tatcagatgaaaacgtgtgtagaaaataagg--ttagaaaccaacatacaaattaggatttataga-aatttcttttgggaacaaatattaggattgaga 25562496  T
Q  429 ttgttctgattcaccttgaacaaagcactattaggatt 466  Q
    ||||| |||||||||||||||||| |||| ||||||||    
T  25562495 ttgttttgattcaccttgaacaaaacactcttaggatt 25562458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 358 - 476
Target Start/End: Original strand, 4897731 - 4897850
Alignment:
Q  358 agggtttagaaaccaacatacaaactagggtttatagaga-atttctcttggcaaca-acactaaggttgggattgttctgattcaccttgaacaaagca 455  Q
    ||||||||||||| |||| ||||||||||||||| ||||| ||||||||  ||   | ||| || ||||| ||||||| | |||||||||||||||| ||    
T  4897731 agggtttagaaacaaaca-acaaactagggtttagagagagatttctctaagcgggagacagtagggttgagattgttttcattcaccttgaacaaatca 4897829  T
Q  456 ctattaggattgagtctcttg 476  Q
    || |||||||||||| |||||    
T  4897830 ctgttaggattgagtatcttg 4897850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 379 - 476
Target Start/End: Original strand, 13294711 - 13294814
Alignment:
Q  379 aaactagggtttatagagaatttctcttggcaacaa-cactaaggttgggattgt-tc-----tgattcaccttgaacaaagcactattaggattgagtc 471  Q
    ||||||| |||| ||||||||| ||||||||||||| ||||| |||||||||||  ||     ||||| |||||||||||| ||||||||||||||| ||    
T  13294711 aaactagagtttgtagagaatt-ctcttggcaacaagcactagggttgggattgaatcaccattgatttaccttgaacaaaacactattaggattgattc 13294809  T
Q  472 tcttg 476  Q
    |||||    
T  13294810 tcttg 13294814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 476
Target Start/End: Complemental strand, 15445493 - 15445428
Alignment:
Q  414 acactaaggttgggattgttctgat---tcaccttgaacaaagcactattaggattgagtctcttg 476  Q
    |||||| ||||| ||||||| ||||   |||||||||||||| |||| ||||||||||||||||||    
T  15445493 acactagggttgagattgttttgatatttcaccttgaacaaaacactgttaggattgagtctcttg 15445428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 101 - 151
Target Start/End: Complemental strand, 31179933 - 31179883
Alignment:
Q  101 tgtgacagttaacttaaaatcagaattctggagaatcgtgccacgatggag 151  Q
    ||||| |||||||||||||||||  ||||| ||||||||| ||||||||||    
T  31179933 tgtgagagttaacttaaaatcaggtttctgcagaatcgtggcacgatggag 31179883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 358 - 476
Target Start/End: Complemental strand, 2144835 - 2144722
Alignment:
Q  358 agggtttagaaaccaacatacaaactagggtttatagagaatttctcttggcaacaacac--taaggttgggattgttctgattcaccttgaacaaagca 455  Q
    ||||||||||| ||||||   |||||||||||| |||||  || ||||||||||||||||  || |||||||||||     |||||||||| | ||| ||    
T  2144835 agggtttagaagccaacactaaaactagggtttgtagagt-ttgctcttggcaacaacacactagggttgggattg-----attcaccttggagaaa-ca 2144743  T
Q  456 ctattaggattgagtctcttg 476  Q
    |||||||||| ||||||||||    
T  2144742 ctattaggatggagtctcttg 2144722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 100 - 149
Target Start/End: Original strand, 2174679 - 2174728
Alignment:
Q  100 gtgtgacagttaacttaaaatcagaattctggagaatcgtgccacgatgg 149  Q
    |||||| |||||||||||||||||  ||||| ||||||||| ||||||||    
T  2174679 gtgtgagagttaacttaaaatcaggtttctgcagaatcgtggcacgatgg 2174728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 101 - 149
Target Start/End: Complemental strand, 21684969 - 21684921
Alignment:
Q  101 tgtgacagttaacttaaaatcagaattctggagaatcgtgccacgatgg 149  Q
    ||||| |||||||||||||||||  ||||| ||||||||| ||||||||    
T  21684969 tgtgagagttaacttaaaatcaggtttctgcagaatcgtggcacgatgg 21684921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 101 - 149
Target Start/End: Complemental strand, 25921992 - 25921944
Alignment:
Q  101 tgtgacagttaacttaaaatcagaattctggagaatcgtgccacgatgg 149  Q
    ||||| |||||||||||||||||  ||||| ||||||||| ||||||||    
T  25921992 tgtgagagttaacttaaaatcaggtttctgcagaatcgtggcacgatgg 25921944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 358 - 414
Target Start/End: Original strand, 29748357 - 29748412
Alignment:
Q  358 agggtttagaaaccaacatacaaactagggtttatagagaatttctcttggcaacaa 414  Q
    ||||||||||| ||||||   |||||||||||| ||||||| |||||||||||||||    
T  29748357 agggtttagaagccaacaagaaaactagggtttgtagagaa-ttctcttggcaacaa 29748412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 101 - 149
Target Start/End: Complemental strand, 34479972 - 34479924
Alignment:
Q  101 tgtgacagttaacttaaaatcagaattctggagaatcgtgccacgatgg 149  Q
    ||||| |||||||||||||||||  ||||| ||||||||| ||||||||    
T  34479972 tgtgagagttaacttaaaatcaggtttctgcagaatcgtggcacgatgg 34479924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0256 (Bit Score: 253; Significance: 1e-140; HSPs: 1)
Name: scaffold0256
Description:

Target: scaffold0256; HSP #1
Raw Score: 253; E-Value: 1e-140
Query Start/End: Original strand, 101 - 476
Target Start/End: Original strand, 15976 - 16350
Alignment:
Q  101 tgtgacagttaacttaaaatcagaattctggagaatcgtgccacgatggagaaacatcgcgccacgattgttgaagtaagattctgaggaagctactgga 200  Q
    ||||| ||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||| ||| |||   |||||||||| ||    
T  15976 tgtgagagttaacttaaaatcagaaatctggagaatcgtgccacgatggagaagcatcgcgccacgattgttgaagcaagcttcctgggaagctactaga 16075  T
Q  201 aatttcgtgccacgatgaagccgcatcgtgccacgatggcatcgctgaagataaaaataaaacgtattttcagcatagatttgtttcagttttttaaggg 300  Q
    |||||||||||||||||   |||||||||||||||||||   ||||||||||||||  |||||||||||| ||  |||||||||||||||||||||||||    
T  16076 aatttcgtgccacgatggccccgcatcgtgccacgatggtcgcgctgaagataaaataaaaacgtatttttagt-tagatttgtttcagttttttaaggg 16174  T
Q  301 tttactttccactataaatataagccttatatcagatgataaa-gtgtgtagaaaaacagggtttagaaaccaacatacaaactagggtttatagagaat 399  Q
    |||||||||||||||||||| | ||||| |||||||||||||| ||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||    
T  16175 tttactttccactataaataca-gccttgtatcagatgataaaagtgtgtagaaaaacagggtttagaagccaacattcaaactagggtttatagagaat 16273  T
Q  400 ttctcttggcaacaacactaaggttgggattgttctgattcaccttgaacaaagcactattaggattgagtctcttg 476  Q
    |||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  16274 ttctcttggcaacaacactagggttgggattgttttgattcaccttgaacaaagcactattaggattgagtctcttg 16350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0209 (Bit Score: 224; Significance: 1e-123; HSPs: 1)
Name: scaffold0209
Description:

Target: scaffold0209; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 101 - 476
Target Start/End: Complemental strand, 17496 - 17143
Alignment:
Q  101 tgtgacagttaacttaaaatcagaattctggagaatcgtgccacgatggagaaacatcgcgccacgattgttgaagtaagattctgaggaagctactgga 200  Q
    ||||| ||||||||||||||||||| ||||||| ||||||||||||| ||||| |||||||||||||||||||||| |||||||   |||||||||||||    
T  17496 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatagagaagcatcgcgccacgattgttgaagcaagattcctgggaagctactgga 17397  T
Q  201 aatttcgtgccacgatgaagccgcatcgtgccacgatggcatcgctgaagataaaaataaaacgtattttcagcatagatttgtttcagttttttaaggg 300  Q
    |||||||                     |||||||||||   |||||||||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  17396 aatttcg---------------------tgccacgatggtcgcgctgaagataaaaataaaacgtattttcagt-tagatttgtttcagttttttaaggg 17319  T
Q  301 tttactttccactataaatataagccttatatcagatgataaagtgtgtagaaaaacagggtttagaaaccaacatacaaactagggtttatagagaatt 400  Q
    |||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17318 tttactttccactataaatataagccttgtatcagatgataaagagtgtagaaaaacagggtttagaaaccaacatacaaactagggtttatagagaatt 17219  T
Q  401 tctcttggcaacaacactaaggttgggattgttctgattcaccttgaacaaagcactattaggattgagtctcttg 476  Q
    ||||||||||||||||||| ||||||||||||| || |||| ||||||||||||||||||||||||||||||||||    
T  17218 tctcttggcaacaacactagggttgggattgttttgtttcatcttgaacaaagcactattaggattgagtctcttg 17143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131 (Bit Score: 209; Significance: 1e-114; HSPs: 1)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 107 - 476
Target Start/End: Original strand, 30799 - 31166
Alignment:
Q  107 agttaacttaaaatcagaattctggagaatcgtgccacgatggagaaacatcgcgccacgattgttgaagtaagattctgaggaagctactggaaatttc 206  Q
    ||||||||||||||||||| ||||||| ||||||||||||||||||| |||||||||| ||| ||||||| |||||||   |||||||||||||||  ||    
T  30799 agttaacttaaaatcagaaatctggagcatcgtgccacgatggagaagcatcgcgccaggatggttgaagcaagattcctgggaagctactggaaaaatc 30898  T
Q  207 gtgccacgatgaagccgcatcgtgccacgatggcatcgctgaagataaaaataaaacgta-ttttcagcatagatttgtttcagttttttaagggtttac 305  Q
    ||||||||||||||| |  ||||||||||||||   || ||||||||||||||||| ||| |||||||  |||||||||||||||||| |||||||||||    
T  30899 gtgccacgatgaagcagggtcgtgccacgatggtcgcgttgaagataaaaataaaatgtatttttcag-ttagatttgtttcagttttataagggtttac 30997  T
Q  306 tttccactataaatataagccttatatcagatgat-aaagtgtgtagaaaaacagggtttagaaaccaacatacaaactagggtttatagagaatttctc 404  Q
    |||||||||||||||  |||||| ||||||||||| |||||||||||||||||| |||||||  ||||||| ||||||||||||||||||||||| ||||    
T  30998 tttccactataaata-cagccttgtatcagatgataaaagtgtgtagaaaaacaaggtttag--accaacaaacaaactagggtttatagagaatctctc 31094  T
Q  405 ttggcaacaacactaaggttgggattgttctgattcaccttgaacaaagcactattaggattgagtctcttg 476  Q
    ||||||||||| ||| ||||||||||||| |||||||||||||||||| |||||||||||||||||||||||    
T  31095 ttggcaacaactctagggttgggattgttttgattcaccttgaacaaaacactattaggattgagtctcttg 31166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 164; Significance: 2e-87; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 118 - 476
Target Start/End: Original strand, 224510 - 224844
Alignment:
Q  118 aatcagaattctggagaatcgtgccacgatggagaaacatcgcgccacgattgttgaagtaagattctgaggaagctactggaaatttcgtgccacgatg 217  Q
    |||||||| ||||||| ||||||||||||||||||| |||||||||||||| ||||||| |||||||   |||||  |||||||||||||||||||||||    
T  224510 aatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactggaaatttcgtgccacgatg 224609  T
Q  218 aagccgcatcgtgccacgatggcatcgctgaagataaaaataaaacgtattttcagcatagatttgtttcagttttttaagggtttactttccactataa 317  Q
    |       |||              || ||||||||||||||||||||||||||||  |||||||||||||||||||||||||||| |||||||||||||    
T  224610 a-------tcg--------------cgttgaagataaaaataaaacgtattttcagt-tagatttgtttcagttttttaagggttttctttccactataa 224687  T
Q  318 atataagccttatatcagatgataaa-gtgtgtagaaaaacagggtttagaaaccaacatacaaactagggtttatagagaatttctcttggcaacaaca 416  Q
    ||| | ||||| |||||||||||||| ||||||||||||||| ||||||||  |||||| ||||||||||||||||||||||| |||||||||||||||     
T  224688 ataca-gccttgtatcagatgataaaagtgtgtagaaaaacaaggtttaga--ccaacaaacaaactagggtttatagagaatctctcttggcaacaact 224784  T
Q  417 ctaaggttgggattgttctgattcaccttgaacaaagcactattaggattgagtctcttg 476  Q
    ||| ||||||||||||| |||||||||||||||||| |||||||||||||||||||||||    
T  224785 ctagggttgggattgttttgattcaccttgaacaaaacactattaggattgagtctcttg 224844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1764 (Bit Score: 143; Significance: 6e-75; HSPs: 1)
Name: scaffold1764
Description:

Target: scaffold1764; HSP #1
Raw Score: 143; E-Value: 6e-75
Query Start/End: Original strand, 101 - 406
Target Start/End: Original strand, 1108 - 1391
Alignment:
Q  101 tgtgacagttaacttaaaatcagaattctggagaatcgtgccacgatggagaaacatcgcgccacgattgttgaagtaagattctgaggaagctactgga 200  Q
    ||||| ||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||  |||||||||||||    
T  1108 tgtgagagttaacttaaaatcagaaatctggagaatcgtgccacgatggagaagcatcgcgccacgattgttgaagcaagattcttgggaagctactgga 1207  T
Q  201 aatttcgtgccacgatgaagccgcatcgtgccacgatggcatcgctgaagataaaaataaaacgtattttcagcatagatttgtttcagttttttaaggg 300  Q
    ||||| |||                     |||||||||   ||||||||||||||  |||||||||||||||  |||||||||||||||||||| ||||    
T  1208 aattttgtg---------------------ccacgatggtcgcgctgaagataaaataaaaacgtattttcagt-tagatttgtttcagttttttgaggg 1285  T
Q  301 tttactttccactataaatataagccttatatcagatgataaa-gtgtgtagaaaaacagggtttagaaaccaacatacaaactagggtttatagagaat 399  Q
    ||||||||||| |||||||| | ||||| |||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  1286 tttactttccaatataaataca-gccttgtatcagatgataaaagtgtgtagaaaaacaaggtttagaaaccaacatacaaactagggtttatagagaat 1384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 101 - 336
Target Start/End: Complemental strand, 42022 - 41788
Alignment:
Q  101 tgtgacagttaacttaaaatcagaattctggagaatcgtgccacgatggagaaacatcgcgccacgattgttgaagtaagattctgaggaagctactgga 200  Q
    ||||| |||||||||||||||||||||||| |||||||||||||||||||||| | ||| ||||||||||||| || ||  ||||| | || | ||||||    
T  42022 tgtgagagttaacttaaaatcagaattctgaagaatcgtgccacgatggagaagcttcgtgccacgattgttggagcaaagttctgggcaaac-actgga 41924  T
Q  201 aatttcgtgccacgatgaagccgcatcgtgccacgatggcatcgctgaagataaaaataaaacgtattttcagcatagatttgtttcag-ttttttaagg 299  Q
    ||  ||||||||||||     || ||||||||||||| |      ||||||||||||||||||||||||| |    | ||||||||||| ||||||||||    
T  41923 aaaatcgtgccacgattgtatcgaatcgtgccacgatagtgcgattgaagataaaaataaaacgtatttttattgaaaatttgtttcagtttttttaagg 41824  T
Q  300 gtttactttccactataaatataagccttatatcaga 336  Q
    | ||||||| |||||||||||||  |||| |||||||    
T  41823 gattacttt-cactataaatatagaccttgtatcaga 41788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0552 (Bit Score: 58; Significance: 3e-24; HSPs: 2)
Name: scaffold0552
Description:

Target: scaffold0552; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 101 - 186
Target Start/End: Complemental strand, 1349 - 1264
Alignment:
Q  101 tgtgacagttaacttaaaatcagaattctggagaatcgtgccacgatggagaaacatcgcgccacgattgttgaagtaagattctg 186  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||| |||| | ||| |||||||||||||||| || ||||||    
T  1349 tgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatgtagaagcttcgtgccacgattgttgaagcaaaattctg 1264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0552; HSP #2
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 246 - 336
Target Start/End: Complemental strand, 1225 - 1136
Alignment:
Q  246 tgaagataaaaataaaacgtattttcagcatagatttgtttcagttttttaagggtttactttccactataaatataagccttatatcaga 336  Q
    ||||||||||||||||||||||||| |    |||||||||||| ||| ||||||| ||||||| |||||||||||||  |||| |||||||    
T  1225 tgaagataaaaataaaacgtatttttattgaagatttgtttcaatttgttaagggattacttt-cactataaatatagaccttgtatcaga 1136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 107 - 149
Target Start/End: Complemental strand, 69827 - 69785
Alignment:
Q  107 agttaacttaaaatcagaattctggagaatcgtgccacgatgg 149  Q
    |||||||||||||||||| ||||| ||||||||| ||||||||    
T  69827 agttaacttaaaatcagatttctgcagaatcgtggcacgatgg 69785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0127 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 100 - 148
Target Start/End: Complemental strand, 13055 - 13007
Alignment:
Q  100 gtgtgacagttaacttaaaatcagaattctggagaatcgtgccacgatg 148  Q
    |||||| |||||||||||||||||  ||||| ||||||||| |||||||    
T  13055 gtgtgagagttaacttaaaatcaggtttctgcagaatcgtggcacgatg 13007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 101 - 149
Target Start/End: Original strand, 28941 - 28989
Alignment:
Q  101 tgtgacagttaacttaaaatcagaattctggagaatcgtgccacgatgg 149  Q
    ||||| |||||||||||||||||  ||||| ||||||||| ||||||||    
T  28941 tgtgagagttaacttaaaatcaggtttctgcagaatcgtggcacgatgg 28989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 101 - 141
Target Start/End: Original strand, 120569 - 120609
Alignment:
Q  101 tgtgacagttaacttaaaatcagaattctggagaatcgtgc 141  Q
    ||||| ||||||||||||||||||| ||||||| |||||||    
T  120569 tgtgagagttaacttaaaatcagaaatctggagtatcgtgc 120609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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