View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11941_high_4 (Length: 280)
Name: NF11941_high_4
Description: NF11941
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11941_high_4 |
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Alignment Details
Target: chr7 (Bit Score: 230; Significance: 1e-127; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 11 - 264
Target Start/End: Complemental strand, 40483641 - 40483388
Alignment:
| Q |
11 |
catagggaagcaaaacaaatagtaaacaaaaagggacaaaaaccatgagtcatgtttggtcccacattttgaatagagatgcatatcttgttgatactat |
110 |
Q |
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| T |
40483641 |
cataaggaagcaaaacaaatactaaacaaaaagggacaaaaaccatgagtcatgtttggtcccacattttgaatagagatgcatatcttgttgatactat |
40483542 |
T |
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| Q |
111 |
aaactcttaacaaccagaattccagaaccaaaatcgtctcctaagaagactttaagtactgaaagcaacgttcaaatgtttttccaagaaaaacagcaat |
210 |
Q |
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| T |
40483541 |
aaactcttaacaagcagaattccagaatcaaaatcgtctcctaagaagactttaagtactgaaagcaacgttcaaatgtttttccaagaaaaacagcaat |
40483442 |
T |
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| Q |
211 |
cttaatatgaggttgaagctagcaagaatcaaatgaaatttcagaagacagtat |
264 |
Q |
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| T |
40483441 |
cttaatatgagttagaagctagcaagaatcaaatgaaatttcagaagacagtat |
40483388 |
T |
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