View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11942_low_19 (Length: 425)

Name: NF11942_low_19
Description: NF11942
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11942_low_19
NF11942_low_19
[»] chr2 (42 HSPs)
chr2 (21-425)||(14408056-14408460)
chr2 (375-425)||(3008426-3008476)
chr2 (375-425)||(33456028-33456078)
chr2 (389-425)||(884124-884160)
chr2 (389-425)||(93139-93175)
chr2 (389-425)||(883917-883953)
chr2 (389-425)||(901990-902026)
chr2 (389-425)||(3976472-3976508)
chr2 (389-425)||(11969119-11969155)
chr2 (389-425)||(17727471-17727507)
chr2 (389-425)||(20998990-20999026)
chr2 (389-425)||(21214202-21214238)
chr2 (389-425)||(25286261-25286297)
chr2 (389-425)||(25621286-25621322)
chr2 (389-425)||(30160394-30160430)
chr2 (389-425)||(32667250-32667286)
chr2 (389-425)||(33985772-33985808)
chr2 (389-425)||(34775424-34775460)
chr2 (389-425)||(42768335-42768371)
chr2 (389-425)||(43195851-43195887)
chr2 (373-424)||(39583568-39583619)
chr2 (393-423)||(8222402-8222432)
chr2 (389-422)||(3977004-3977037)
chr2 (373-418)||(5511787-5511832)
chr2 (392-425)||(25441763-25441796)
chr2 (389-425)||(883602-883638)
chr2 (389-425)||(2333359-2333395)
chr2 (389-425)||(3435487-3435523)
chr2 (393-425)||(5424787-5424819)
chr2 (393-425)||(6183371-6183403)
chr2 (389-421)||(9889320-9889352)
chr2 (373-425)||(11339675-11339726)
chr2 (389-425)||(12431965-12432001)
chr2 (393-425)||(16007044-16007076)
chr2 (397-425)||(18183533-18183561)
chr2 (389-425)||(19860104-19860140)
chr2 (389-425)||(23054393-23054429)
chr2 (393-425)||(28895593-28895625)
chr2 (389-425)||(30156275-30156311)
chr2 (389-425)||(32667044-32667080)
chr2 (389-425)||(38760318-38760354)
chr2 (389-425)||(40010041-40010077)
[»] chr1 (49 HSPs)
chr1 (369-425)||(17557704-17557760)
chr1 (375-425)||(347110-347160)
chr1 (391-425)||(19609188-19609222)
chr1 (389-425)||(463084-463120)
chr1 (389-425)||(2104261-2104297)
chr1 (373-425)||(7525054-7525106)
chr1 (389-425)||(11149424-11149460)
chr1 (389-425)||(19481393-19481429)
chr1 (389-425)||(19809959-19809995)
chr1 (389-425)||(20735589-20735625)
chr1 (389-425)||(29273067-29273103)
chr1 (389-425)||(29273226-29273262)
chr1 (389-425)||(36332179-36332215)
chr1 (373-424)||(19810996-19811047)
chr1 (373-416)||(21641405-21641448)
chr1 (390-425)||(29272909-29272944)
chr1 (390-425)||(38474350-38474385)
chr1 (372-423)||(41590213-41590264)
chr1 (391-425)||(102084-102118)
chr1 (389-423)||(10239500-10239534)
chr1 (391-425)||(19937046-19937080)
chr1 (391-425)||(31305778-31305812)
chr1 (373-423)||(41590525-41590574)
chr1 (389-422)||(15392095-15392128)
chr1 (373-425)||(347338-347390)
chr1 (389-425)||(2997057-2997093)
chr1 (389-425)||(4022126-4022162)
chr1 (389-421)||(9380971-9381003)
chr1 (389-425)||(9381166-9381202)
chr1 (373-425)||(13031126-13031178)
chr1 (389-425)||(15392171-15392207)
chr1 (393-425)||(17419854-17419886)
chr1 (373-425)||(19810683-19810735)
chr1 (389-425)||(26366833-26366869)
chr1 (389-421)||(28509388-28509420)
chr1 (373-420)||(29409949-29409997)
chr1 (389-425)||(31789416-31789452)
chr1 (393-425)||(33342283-33342315)
chr1 (389-425)||(33879779-33879815)
chr1 (389-425)||(33964440-33964476)
chr1 (389-425)||(35024461-35024497)
chr1 (389-425)||(35926249-35926285)
chr1 (389-425)||(39649085-39649121)
chr1 (389-425)||(40571594-40571630)
chr1 (393-425)||(43361557-43361589)
chr1 (393-425)||(43361762-43361794)
chr1 (389-425)||(43423346-43423382)
chr1 (389-425)||(48558322-48558358)
chr1 (389-425)||(52846850-52846886)
[»] chr8 (29 HSPs)
chr8 (375-425)||(30590515-30590565)
chr8 (373-425)||(26642654-26642706)
chr8 (375-425)||(30966069-30966119)
chr8 (389-425)||(8559648-8559684)
chr8 (389-425)||(10989035-10989071)
chr8 (389-425)||(10989242-10989278)
chr8 (389-425)||(16454636-16454672)
chr8 (389-425)||(18905923-18905959)
chr8 (389-425)||(21653871-21653907)
chr8 (389-425)||(32931468-32931504)
chr8 (389-425)||(34248144-34248180)
chr8 (389-425)||(34248426-34248462)
chr8 (389-425)||(36997233-36997269)
chr8 (389-425)||(43599378-43599414)
chr8 (389-425)||(45031168-45031204)
chr8 (389-425)||(45031377-45031413)
chr8 (378-425)||(34621954-34622001)
chr8 (390-425)||(36993949-36993984)
chr8 (391-425)||(21653394-21653428)
chr8 (389-425)||(3183912-3183948)
chr8 (389-425)||(7729973-7730009)
chr8 (389-421)||(8276620-8276652)
chr8 (389-425)||(15010822-15010858)
chr8 (389-425)||(15011030-15011066)
chr8 (389-425)||(20760661-20760697)
chr8 (389-425)||(25972322-25972358)
chr8 (389-425)||(30176465-30176501)
chr8 (389-425)||(40902394-40902430)
chr8 (389-421)||(43984317-43984349)
[»] chr6 (25 HSPs)
chr6 (371-423)||(9592381-9592433)
chr6 (389-425)||(1744843-1744879)
chr6 (389-425)||(8144084-8144120)
chr6 (389-425)||(10418339-10418375)
chr6 (389-425)||(10733439-10733475)
chr6 (389-425)||(15101112-15101148)
chr6 (389-425)||(16876831-16876867)
chr6 (389-425)||(16877011-16877047)
chr6 (389-425)||(24055110-24055146)
chr6 (389-425)||(27914327-27914363)
chr6 (389-425)||(28149860-28149896)
chr6 (389-424)||(1469029-1469064)
chr6 (389-420)||(11316915-11316946)
chr6 (390-425)||(17147907-17147942)
chr6 (393-422)||(5897422-5897451)
chr6 (374-422)||(1205850-1205898)
chr6 (393-425)||(5269278-5269310)
chr6 (389-425)||(9601843-9601879)
chr6 (389-425)||(11313383-11313419)
chr6 (389-425)||(12134484-12134520)
chr6 (393-425)||(19054560-19054592)
chr6 (389-425)||(19712405-19712441)
chr6 (389-425)||(19712610-19712646)
chr6 (389-425)||(24558650-24558686)
chr6 (389-425)||(24558855-24558891)
[»] chr5 (47 HSPs)
chr5 (373-425)||(30366679-30366731)
chr5 (373-425)||(31973135-31973187)
chr5 (374-425)||(16275308-16275359)
chr5 (389-425)||(48105-48141)
chr5 (389-425)||(48312-48348)
chr5 (389-425)||(1892091-1892127)
chr5 (389-425)||(2908770-2908806)
chr5 (389-425)||(3015622-3015658)
chr5 (389-425)||(3762973-3763009)
chr5 (389-425)||(12965247-12965283)
chr5 (389-425)||(13413651-13413687)
chr5 (389-425)||(13843764-13843800)
chr5 (389-425)||(21633518-21633554)
chr5 (389-425)||(21641765-21641801)
chr5 (389-425)||(24918228-24918264)
chr5 (389-425)||(24994136-24994172)
chr5 (389-425)||(28358036-28358072)
chr5 (389-425)||(34457163-34457199)
chr5 (389-425)||(34457370-34457406)
chr5 (389-425)||(35526989-35527025)
chr5 (389-425)||(35527275-35527311)
chr5 (389-425)||(37656733-37656769)
chr5 (389-425)||(37995635-37995671)
chr5 (389-425)||(38131831-38131867)
chr5 (389-425)||(38376798-38376834)
chr5 (389-425)||(38663314-38663350)
chr5 (389-425)||(40169042-40169078)
chr5 (373-416)||(22198986-22199029)
chr5 (394-425)||(27760142-27760173)
chr5 (390-425)||(29432479-29432514)
chr5 (389-419)||(3015418-3015448)
chr5 (391-425)||(8397038-8397072)
chr5 (389-425)||(258841-258876)
chr5 (389-425)||(873697-873733)
chr5 (389-425)||(904754-904790)
chr5 (389-425)||(2716613-2716649)
chr5 (393-425)||(2908567-2908599)
chr5 (389-425)||(4796425-4796461)
chr5 (373-425)||(15844510-15844562)
chr5 (389-421)||(22196554-22196586)
chr5 (393-425)||(24125129-24125161)
chr5 (389-425)||(28156097-28156133)
chr5 (389-425)||(37781845-37781881)
chr5 (375-419)||(38069573-38069617)
chr5 (389-425)||(39205665-39205701)
chr5 (389-425)||(43490217-43490253)
chr5 (389-425)||(43490464-43490500)
[»] chr4 (54 HSPs)
chr4 (373-425)||(30490939-30490991)
chr4 (389-425)||(35399258-35399294)
chr4 (389-425)||(35399417-35399453)
chr4 (372-425)||(22823889-22823942)
chr4 (389-425)||(12016684-12016720)
chr4 (389-425)||(12016892-12016928)
chr4 (389-425)||(17077145-17077181)
chr4 (373-421)||(17912812-17912860)
chr4 (389-425)||(21497684-21497720)
chr4 (389-425)||(21498254-21498290)
chr4 (389-425)||(21498598-21498634)
chr4 (389-425)||(23018537-23018573)
chr4 (389-425)||(28395244-28395280)
chr4 (389-425)||(29669364-29669400)
chr4 (389-425)||(36558467-36558503)
chr4 (389-425)||(41176773-41176809)
chr4 (389-425)||(43943740-43943776)
chr4 (389-425)||(43972422-43972458)
chr4 (389-425)||(45427253-45427289)
chr4 (389-425)||(48046424-48046460)
chr4 (389-425)||(50858079-50858115)
chr4 (389-425)||(51470550-51470586)
chr4 (389-425)||(52214682-52214718)
chr4 (389-425)||(53740249-53740285)
chr4 (390-425)||(5488434-5488469)
chr4 (390-425)||(6778469-6778504)
chr4 (390-425)||(15665220-15665255)
chr4 (375-414)||(50830704-50830743)
chr4 (389-419)||(17076941-17076971)
chr4 (391-425)||(28496508-28496542)
chr4 (389-423)||(50858394-50858428)
chr4 (392-425)||(25753609-25753642)
chr4 (392-425)||(27048412-27048445)
chr4 (391-424)||(35565146-35565179)
chr4 (395-424)||(39110975-39111004)
chr4 (389-422)||(54210447-54210480)
chr4 (389-425)||(990614-990650)
chr4 (393-425)||(991271-991303)
chr4 (393-425)||(6778681-6778713)
chr4 (389-425)||(18435927-18435963)
chr4 (389-425)||(23311471-23311507)
chr4 (389-425)||(26942873-26942909)
chr4 (389-425)||(27048138-27048174)
chr4 (389-425)||(27634327-27634363)
chr4 (389-425)||(28245855-28245891)
chr4 (389-425)||(29113516-29113552)
chr4 (389-425)||(29734628-29734664)
chr4 (389-425)||(34206256-34206292)
chr4 (387-423)||(37130149-37130185)
chr4 (389-425)||(45426937-45426973)
chr4 (389-425)||(51469548-51469584)
chr4 (389-421)||(51470715-51470747)
chr4 (389-425)||(52827233-52827269)
chr4 (393-425)||(55253349-55253381)
[»] chr3 (56 HSPs)
chr3 (389-425)||(41380790-41380826)
chr3 (373-424)||(39225010-39225061)
chr3 (389-425)||(3985840-3985876)
chr3 (389-425)||(4191123-4191159)
chr3 (389-425)||(9264087-9264123)
chr3 (389-425)||(9264294-9264330)
chr3 (389-425)||(22407442-22407478)
chr3 (389-425)||(22407649-22407685)
chr3 (389-425)||(31564004-31564040)
chr3 (389-425)||(39078772-39078808)
chr3 (389-425)||(40230436-40230472)
chr3 (389-425)||(40230640-40230676)
chr3 (389-425)||(44573706-44573742)
chr3 (389-425)||(44574003-44574039)
chr3 (389-425)||(49477394-49477430)
chr3 (389-425)||(49477601-49477637)
chr3 (393-425)||(50338387-50338419)
chr3 (389-425)||(50692390-50692426)
chr3 (389-425)||(50692593-50692629)
chr3 (389-425)||(51338404-51338440)
chr3 (389-425)||(51642429-51642465)
chr3 (389-425)||(51642636-51642672)
chr3 (391-425)||(10453706-10453740)
chr3 (391-425)||(39956677-39956711)
chr3 (371-425)||(49812445-49812499)
chr3 (389-422)||(4255989-4256022)
chr3 (389-422)||(9264501-9264534)
chr3 (391-424)||(33909836-33909869)
chr3 (392-425)||(38300287-38300320)
chr3 (389-425)||(4029645-4029681)
chr3 (389-425)||(9179200-9179236)
chr3 (389-425)||(13769292-13769328)
chr3 (389-425)||(21750542-21750578)
chr3 (389-425)||(21832200-21832236)
chr3 (389-425)||(22339808-22339844)
chr3 (389-425)||(24539221-24539257)
chr3 (389-425)||(29369858-29369894)
chr3 (373-425)||(30326938-30326990)
chr3 (372-412)||(31151832-31151872)
chr3 (393-425)||(31563704-31563736)
chr3 (389-425)||(34250353-34250389)
chr3 (389-425)||(34356843-34356879)
chr3 (389-425)||(34715456-34715492)
chr3 (389-425)||(37058772-37058808)
chr3 (393-425)||(38422050-38422082)
chr3 (389-425)||(40302088-40302124)
chr3 (389-425)||(40337877-40337913)
chr3 (389-421)||(44573397-44573429)
chr3 (389-425)||(45443347-45443383)
chr3 (389-425)||(48407552-48407588)
chr3 (389-421)||(48685313-48685345)
chr3 (373-425)||(49812224-49812276)
chr3 (389-425)||(50057096-50057132)
chr3 (373-425)||(50187402-50187454)
chr3 (393-425)||(51338446-51338478)
chr3 (389-417)||(53761399-53761427)
[»] chr7 (34 HSPs)
chr7 (373-422)||(39079926-39079975)
chr7 (389-425)||(1663605-1663641)
chr7 (389-425)||(6783105-6783141)
chr7 (389-425)||(23396676-23396712)
chr7 (389-425)||(36092393-36092429)
chr7 (388-424)||(36238272-36238308)
chr7 (389-425)||(41670900-41670936)
chr7 (389-425)||(43384281-43384317)
chr7 (390-425)||(27820913-27820948)
chr7 (390-425)||(32000884-32000919)
chr7 (373-420)||(38963368-38963415)
chr7 (391-425)||(23821363-23821397)
chr7 (389-423)||(35866640-35866674)
chr7 (391-425)||(48116299-48116333)
chr7 (392-425)||(14595885-14595918)
chr7 (371-424)||(25589054-25589107)
chr7 (392-425)||(39079640-39079673)
chr7 (376-425)||(39164694-39164743)
chr7 (388-425)||(40137696-40137733)
chr7 (389-425)||(257268-257304)
chr7 (389-425)||(1596860-1596896)
chr7 (389-425)||(1661192-1661228)
chr7 (389-425)||(7135244-7135280)
chr7 (389-425)||(14596194-14596229)
chr7 (389-425)||(21033621-21033657)
chr7 (373-425)||(21048694-21048746)
chr7 (393-425)||(28910099-28910131)
chr7 (393-425)||(28910232-28910264)
chr7 (393-425)||(31374832-31374864)
chr7 (393-425)||(37272050-37272082)
chr7 (389-425)||(40703412-40703448)
chr7 (389-425)||(40703653-40703689)
chr7 (389-425)||(41489958-41489994)
chr7 (389-425)||(43288599-43288635)
[»] scaffold0060 (2 HSPs)
scaffold0060 (393-425)||(13637-13669)
scaffold0060 (389-425)||(20607-20643)
[»] scaffold0729 (2 HSPs)
scaffold0729 (390-425)||(2752-2787)
scaffold0729 (393-425)||(2543-2575)
[»] scaffold1138 (1 HSPs)
scaffold1138 (389-425)||(2080-2116)
[»] scaffold0434 (1 HSPs)
scaffold0434 (389-425)||(13373-13409)
[»] scaffold0419 (1 HSPs)
scaffold0419 (393-425)||(4244-4276)
[»] scaffold0029 (1 HSPs)
scaffold0029 (389-425)||(76919-76955)


Alignment Details
Target: chr2 (Bit Score: 373; Significance: 0; HSPs: 42)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 373; E-Value: 0
Query Start/End: Original strand, 21 - 425
Target Start/End: Complemental strand, 14408460 - 14408056
Alignment:
Q  21 acatcactaaaggactgacaaaatgatcggatgttccatctaaaggattgacaaaatgatcggatattccaccaatatccctgattattgacagacaagg 120  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||    
T  14408460 acatcactaaaggactgacaaaatgatcggatgttccatctaaaggattgacaaaatgatcggatgttctaccaatatccctgattattgacagacaagg 14408361  T
Q  121 gtacaatatgacattaaattgtgttcctaaaaggaatgcataactaatatcatacaacaaaattcaccaaaatccaaaaacaaatacttctagcccggtc 220  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14408360 ctacaatatgacattaaattgtgttcctaaaaggaatgcataactaatatcatacaacaaaattcaccaaaatccaaaaacaaatacttctagcccggtc 14408261  T
Q  221 atgaagtgacagttgagtgacaagtgtctgactttgtaacctacctcaaggtattgagttccaatccattcaaaaaccgtattaaaatggtcattagtgt 320  Q
    |||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  14408260 atgaagtgacagttgagtgataagtgtttgactttgtaacctacctcaaggtattgagttcaaatccattcaaaaaccgtattaaaatggtcattagtgt 14408161  T
Q  321 ccctttaattaaaaatgatttctcccttccccaaatttaatgtaaaaataattcttagaatttgggccgggcctaactcaaccttacaaaaccggcttgt 420  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  14408160 ccctttaattaaaaatgatttctcccttccccaaatttaatgtcaaaataattcttagaatttcggccgggcctaactcaaccttacaaaaccggcttgt 14408061  T
Q  421 aaggt 425  Q
    |||||    
T  14408060 aaggt 14408056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 375 - 425
Target Start/End: Complemental strand, 3008476 - 3008426
Alignment:
Q  375 ttagaatttgggccgggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    ||||||||||||  |||||||||||||||||||||||| ||||||||||||    
T  3008476 ttagaatttgggttgggcctaactcaaccttacaaaactggcttgtaaggt 3008426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 375 - 425
Target Start/End: Complemental strand, 33456078 - 33456028
Alignment:
Q  375 ttagaatttgggccgggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    ||||||||||||  ||||||||||||||||||||||||||| |||||||||    
T  33456078 ttagaatttgggttgggcctaactcaaccttacaaaaccggtttgtaaggt 33456028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 389 - 425
Target Start/End: Complemental strand, 884160 - 884124
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||||||||||||||||||||||||||||||||    
T  884160 gggcctaactcaaccttacaaaaccggcttgtaaggt 884124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 389 - 425
Target Start/End: Original strand, 93139 - 93175
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||||||| ||||||||||||||||||||||||    
T  93139 gggcctaactcatccttacaaaaccggcttgtaaggt 93175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 389 - 425
Target Start/End: Complemental strand, 883953 - 883917
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||||||| ||||||||||||||||||||||||    
T  883953 gggcctaactcatccttacaaaaccggcttgtaaggt 883917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 389 - 425
Target Start/End: Complemental strand, 902026 - 901990
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||||||| ||||||||||||||||||||||||    
T  902026 gggcctaactcatccttacaaaaccggcttgtaaggt 901990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 389 - 425
Target Start/End: Original strand, 3976472 - 3976508
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||||||| ||||||||||||||||||||||||    
T  3976472 gggcctaactcatccttacaaaaccggcttgtaaggt 3976508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 389 - 425
Target Start/End: Complemental strand, 11969155 - 11969119
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||||||| ||||||||||||||||||||||||    
T  11969155 gggcctaactcatccttacaaaaccggcttgtaaggt 11969119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 389 - 425
Target Start/End: Complemental strand, 17727507 - 17727471
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||||||| ||||||||||||||||||||||||    
T  17727507 gggcctaactcatccttacaaaaccggcttgtaaggt 17727471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 389 - 425
Target Start/End: Original strand, 20998990 - 20999026
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||||||| ||||||||||||||||||||||||    
T  20998990 gggcctaactcatccttacaaaaccggcttgtaaggt 20999026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 389 - 425
Target Start/End: Original strand, 21214202 - 21214238
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||||||| ||||||||||||||||||||||||    
T  21214202 gggcctaactcatccttacaaaaccggcttgtaaggt 21214238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 389 - 425
Target Start/End: Original strand, 25286261 - 25286297
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||||||| ||||||||||||||||||||||||    
T  25286261 gggcctaactcatccttacaaaaccggcttgtaaggt 25286297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 389 - 425
Target Start/End: Original strand, 25621286 - 25621322
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||||||| ||||||||||||||||||||||||    
T  25621286 gggcctaactcatccttacaaaaccggcttgtaaggt 25621322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 389 - 425
Target Start/End: Complemental strand, 30160430 - 30160394
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||||||| ||||||||||||||||||||||||    
T  30160430 gggcctaactcatccttacaaaaccggcttgtaaggt 30160394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 389 - 425
Target Start/End: Complemental strand, 32667286 - 32667250
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||||||| ||||||||||||||||||||||||    
T  32667286 gggcctaactcatccttacaaaaccggcttgtaaggt 32667250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 389 - 425
Target Start/End: Original strand, 33985772 - 33985808
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||||||| ||||||||||||||||||||||||    
T  33985772 gggcctaactcatccttacaaaaccggcttgtaaggt 33985808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 389 - 425
Target Start/End: Complemental strand, 34775460 - 34775424
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||||||| ||||||||||||||||||||||||    
T  34775460 gggcctaactcatccttacaaaaccggcttgtaaggt 34775424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 389 - 425
Target Start/End: Original strand, 42768335 - 42768371
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||||||| ||||||||||||||||||||||||    
T  42768335 gggcctaactcatccttacaaaaccggcttgtaaggt 42768371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 389 - 425
Target Start/End: Complemental strand, 43195887 - 43195851
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||||||| ||||||||||||||||||||||||    
T  43195887 gggcctaactcatccttacaaaaccggcttgtaaggt 43195851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 373 - 424
Target Start/End: Complemental strand, 39583619 - 39583568
Alignment:
Q  373 tcttagaatttgggccgggcctaactcaaccttacaaaaccggcttgtaagg 424  Q
    |||||||||||||| |||||||| ||||| | | ||||||||||||||||||    
T  39583619 tcttagaatttgggtcgggcctatctcaatcctgcaaaaccggcttgtaagg 39583568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 393 - 423
Target Start/End: Complemental strand, 8222432 - 8222402
Alignment:
Q  393 ctaactcaaccttacaaaaccggcttgtaag 423  Q
    |||||||||||||||||||||||||||||||    
T  8222432 ctaactcaaccttacaaaaccggcttgtaag 8222402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 389 - 422
Target Start/End: Original strand, 3977004 - 3977037
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaa 422  Q
    |||||||||||| |||||||||||||||||||||    
T  3977004 gggcctaactcatccttacaaaaccggcttgtaa 3977037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 373 - 418
Target Start/End: Original strand, 5511787 - 5511832
Alignment:
Q  373 tcttagaatttgggccgggcctaactcaaccttacaaaaccggctt 418  Q
    ||||||||||||||  |||||||||||||||||  |||||||||||    
T  5511787 tcttagaatttgggttgggcctaactcaaccttctaaaaccggctt 5511832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 392 - 425
Target Start/End: Complemental strand, 25441796 - 25441763
Alignment:
Q  392 cctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    ||||||||| ||||||||||||||||||||||||    
T  25441796 cctaactcatccttacaaaaccggcttgtaaggt 25441763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 389 - 425
Target Start/End: Original strand, 883602 - 883638
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||| ||||||| ||||||||||||||||||||||||    
T  883602 gggcataactcatccttacaaaaccggcttgtaaggt 883638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 389 - 425
Target Start/End: Original strand, 2333359 - 2333395
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||| ||||||||||||||||||| ||||||||||||    
T  2333359 gggcttaactcaaccttacaaaactggcttgtaaggt 2333395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 389 - 425
Target Start/End: Original strand, 3435487 - 3435523
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||||||| |||||||||||||| |||||||||    
T  3435487 gggcctaactcatccttacaaaaccggtttgtaaggt 3435523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 393 - 425
Target Start/End: Original strand, 5424787 - 5424819
Alignment:
Q  393 ctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||| ||||||||||||||||||||||||    
T  5424787 ctaactcatccttacaaaaccggcttgtaaggt 5424819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 393 - 425
Target Start/End: Original strand, 6183371 - 6183403
Alignment:
Q  393 ctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||| ||||||||||||||||||||||||    
T  6183371 ctaactcatccttacaaaaccggcttgtaaggt 6183403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 389 - 421
Target Start/End: Original strand, 9889320 - 9889352
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgta 421  Q
    |||||||||||| ||||||||||||||||||||    
T  9889320 gggcctaactcatccttacaaaaccggcttgta 9889352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 373 - 425
Target Start/End: Original strand, 11339675 - 11339726
Alignment:
Q  373 tcttagaatttgggccgggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    ||||||||||||||  |||||||||| ||| ||||||||||| ||||||||||    
T  11339675 tcttagaatttgggttgggcctaactaaac-ttacaaaaccgacttgtaaggt 11339726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 389 - 425
Target Start/End: Complemental strand, 12432001 - 12431965
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    ||||||| |||| ||||||||||||||||||||||||    
T  12432001 gggcctagctcatccttacaaaaccggcttgtaaggt 12431965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 393 - 425
Target Start/End: Complemental strand, 16007076 - 16007044
Alignment:
Q  393 ctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||| ||||||||||||||||||||||||    
T  16007076 ctaactcatccttacaaaaccggcttgtaaggt 16007044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 397 - 425
Target Start/End: Complemental strand, 18183561 - 18183533
Alignment:
Q  397 ctcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||||||||||||||||||||||||    
T  18183561 ctcaaccttacaaaaccggcttgtaaggt 18183533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 389 - 425
Target Start/End: Complemental strand, 19860140 - 19860104
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||| ||| ||||||||||||||||||||||||    
T  19860140 gggcctaaatcatccttacaaaaccggcttgtaaggt 19860104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 389 - 425
Target Start/End: Complemental strand, 23054429 - 23054393
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||||||| ||||||||||||| ||||||||||    
T  23054429 gggcctaactcatccttacaaaaccgtcttgtaaggt 23054393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 393 - 425
Target Start/End: Complemental strand, 28895625 - 28895593
Alignment:
Q  393 ctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||| ||||||||||||||||||||||||    
T  28895625 ctaactcatccttacaaaaccggcttgtaaggt 28895593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 389 - 425
Target Start/End: Complemental strand, 30156311 - 30156275
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||||| | ||||||||||||||||||||||||    
T  30156311 gggcctaacttatccttacaaaaccggcttgtaaggt 30156275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 389 - 425
Target Start/End: Complemental strand, 32667080 - 32667044
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||||||| | ||||||||||||||||||||||    
T  32667080 gggcctaactcatcattacaaaaccggcttgtaaggt 32667044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 389 - 425
Target Start/End: Original strand, 38760318 - 38760354
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||||||| | ||||||||||||||||||||||    
T  38760318 gggcctaactcatcgttacaaaaccggcttgtaaggt 38760354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 389 - 425
Target Start/End: Complemental strand, 40010077 - 40010041
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    ||||||||| || ||||||||||||||||||||||||    
T  40010077 gggcctaacacatccttacaaaaccggcttgtaaggt 40010041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 49)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 369 - 425
Target Start/End: Original strand, 17557704 - 17557760
Alignment:
Q  369 taattcttagaatttgggccgggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    ||||||||||||||||||  ||||||||||||||||||||||| | |||||||||||    
T  17557704 taattcttagaatttgggttgggcctaactcaaccttacaaaatcagcttgtaaggt 17557760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 375 - 425
Target Start/End: Complemental strand, 347160 - 347110
Alignment:
Q  375 ttagaatttgggccgggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    ||||||||||||  || |||||||||||||||||||||| |||||||||||    
T  347160 ttagaatttgggttggccctaactcaaccttacaaaaccagcttgtaaggt 347110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 391 - 425
Target Start/End: Original strand, 19609188 - 19609222
Alignment:
Q  391 gcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||||||||||||||||||||||||||||||    
T  19609188 gcctaactcaaccttacaaaaccggcttgtaaggt 19609222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 389 - 425
Target Start/End: Original strand, 463084 - 463120
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||||||| ||||||||||||||||||||||||    
T  463084 gggcctaactcatccttacaaaaccggcttgtaaggt 463120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 389 - 425
Target Start/End: Original strand, 2104261 - 2104297
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||||||| ||||||||||||||||||||||||    
T  2104261 gggcctaactcatccttacaaaaccggcttgtaaggt 2104297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 373 - 425
Target Start/End: Complemental strand, 7525106 - 7525054
Alignment:
Q  373 tcttagaatttgggccgggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||||||||   | ||||||||||||||||||||||| |||||||||||    
T  7525106 tcttagaatttggattgagcctaactcaaccttacaaaaccagcttgtaaggt 7525054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 389 - 425
Target Start/End: Original strand, 11149424 - 11149460
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||||||| ||||||||||||||||||||||||    
T  11149424 gggcctaactcatccttacaaaaccggcttgtaaggt 11149460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 389 - 425
Target Start/End: Original strand, 19481393 - 19481429
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||||||| ||||||||||||||||||||||||    
T  19481393 gggcctaactcatccttacaaaaccggcttgtaaggt 19481429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 389 - 425
Target Start/End: Original strand, 19809959 - 19809995
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    ||||||||||||||||||||||| |||||||||||||    
T  19809959 gggcctaactcaaccttacaaaatcggcttgtaaggt 19809995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 389 - 425
Target Start/End: Complemental strand, 20735625 - 20735589
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||||||| ||||||||||||||||||||||||    
T  20735625 gggcctaactcatccttacaaaaccggcttgtaaggt 20735589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 389 - 425
Target Start/End: Original strand, 29273067 - 29273103
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||||||| ||||||||||||||||||||||||    
T  29273067 gggcctaactcatccttacaaaaccggcttgtaaggt 29273103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 389 - 425
Target Start/End: Original strand, 29273226 - 29273262
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||||||| ||||||||||||||||||||||||    
T  29273226 gggcctaactcatccttacaaaaccggcttgtaaggt 29273262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 389 - 425
Target Start/End: Complemental strand, 36332215 - 36332179
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||||||| ||||||||||||||||||||||||    
T  36332215 gggcctaactcatccttacaaaaccggcttgtaaggt 36332179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 373 - 424
Target Start/End: Original strand, 19810996 - 19811047
Alignment:
Q  373 tcttagaatttgggccgggcctaactcaaccttacaaaaccggcttgtaagg 424  Q
    ||||| ||||||||   ||||||| |||||||||||||||||||||||||||    
T  19810996 tcttaaaatttgggttcggcctaagtcaaccttacaaaaccggcttgtaagg 19811047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 373 - 416
Target Start/End: Original strand, 21641405 - 21641448
Alignment:
Q  373 tcttagaatttgggccgggcctaactcaaccttacaaaaccggc 416  Q
    ||||| ||||||||  ||||||||||||||||||||||||||||    
T  21641405 tcttaaaatttgggttgggcctaactcaaccttacaaaaccggc 21641448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 390 - 425
Target Start/End: Original strand, 29272909 - 29272944
Alignment:
Q  390 ggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    ||||||||||| ||||||||||||||||||||||||    
T  29272909 ggcctaactcatccttacaaaaccggcttgtaaggt 29272944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 390 - 425
Target Start/End: Complemental strand, 38474385 - 38474350
Alignment:
Q  390 ggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    ||||||||||| ||||||||||||||||||||||||    
T  38474385 ggcctaactcatccttacaaaaccggcttgtaaggt 38474350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 372 - 423
Target Start/End: Original strand, 41590213 - 41590264
Alignment:
Q  372 ttcttagaatttgggccgggcctaactcaaccttacaaaaccggcttgtaag 423  Q
    |||||||||||| ||  ||||| ||||||||||||||||||| |||||||||    
T  41590213 ttcttagaatttaggttgggccaaactcaaccttacaaaaccagcttgtaag 41590264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 391 - 425
Target Start/End: Original strand, 102084 - 102118
Alignment:
Q  391 gcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    ||||||||||||| |||||||||||||||||||||    
T  102084 gcctaactcaaccctacaaaaccggcttgtaaggt 102118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 389 - 423
Target Start/End: Complemental strand, 10239534 - 10239500
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaag 423  Q
    |||||||||||||||||||||||| ||||||||||    
T  10239534 gggcctaactcaaccttacaaaactggcttgtaag 10239500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 391 - 425
Target Start/End: Original strand, 19937046 - 19937080
Alignment:
Q  391 gcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||||| ||||||||||||||||||||||||    
T  19937046 gcctaactcatccttacaaaaccggcttgtaaggt 19937080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 391 - 425
Target Start/End: Complemental strand, 31305812 - 31305778
Alignment:
Q  391 gcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||||| ||||||||||||||||||||||||    
T  31305812 gcctaactcatccttacaaaaccggcttgtaaggt 31305778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 373 - 423
Target Start/End: Original strand, 41590525 - 41590574
Alignment:
Q  373 tcttagaatttgggccgggcctaactcaaccttacaaaaccggcttgtaag 423  Q
    ||||||||||||||  || |||||||||||||||| |||||||||||||||    
T  41590525 tcttagaatttgggttgg-cctaactcaaccttacgaaaccggcttgtaag 41590574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 389 - 422
Target Start/End: Complemental strand, 15392128 - 15392095
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaa 422  Q
    |||||||||||| |||||||||||||||||||||    
T  15392128 gggcctaactcatccttacaaaaccggcttgtaa 15392095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 373 - 425
Target Start/End: Complemental strand, 347390 - 347338
Alignment:
Q  373 tcttagaatttgggccgggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    ||||||||||||||  |  ||||||||||||||||||||| ||||| ||||||    
T  347390 tcttagaatttgggttgaacctaactcaaccttacaaaactggcttctaaggt 347338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 389 - 425
Target Start/End: Original strand, 2997057 - 2997093
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||||||| ||||||||||||||||||| ||||    
T  2997057 gggcctaactcatccttacaaaaccggcttgtgaggt 2997093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 389 - 425
Target Start/End: Original strand, 4022126 - 4022162
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||||||| ||||||||||| ||||||||||||    
T  4022126 gggcctaactcatccttacaaaactggcttgtaaggt 4022162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 389 - 421
Target Start/End: Complemental strand, 9381003 - 9380971
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgta 421  Q
    |||||||||||| ||||||||||||||||||||    
T  9381003 gggcctaactcatccttacaaaaccggcttgta 9380971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 389 - 425
Target Start/End: Complemental strand, 9381202 - 9381166
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||||||| ||||||||| ||||||||||||||    
T  9381202 gggcctaactcatccttacaaagccggcttgtaaggt 9381166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 373 - 425
Target Start/End: Original strand, 13031126 - 13031178
Alignment:
Q  373 tcttagaatttgggccgggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    ||||||||||||||  || |||||||||||| ||||||||| | |||||||||    
T  13031126 tcttagaatttgggttggacctaactcaaccctacaaaaccagtttgtaaggt 13031178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 389 - 425
Target Start/End: Complemental strand, 15392207 - 15392171
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||||||| |||||||||| |||||||||||||    
T  15392207 gggcctaactcatccttacaaaatcggcttgtaaggt 15392171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 393 - 425
Target Start/End: Complemental strand, 17419886 - 17419854
Alignment:
Q  393 ctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||| ||||||||||||||||||||||||    
T  17419886 ctaactcatccttacaaaaccggcttgtaaggt 17419854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 373 - 425
Target Start/End: Original strand, 19810683 - 19810735
Alignment:
Q  373 tcttagaatttgggccgggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    ||||| ||||||||  ||||||| ||||||||||||||| |||||| ||||||    
T  19810683 tcttaaaatttgggttgggcctagctcaaccttacaaaatcggcttctaaggt 19810735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 389 - 425
Target Start/End: Original strand, 26366833 - 26366869
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||| ||||||| ||||||||||||||||||||||||    
T  26366833 gggcgtaactcatccttacaaaaccggcttgtaaggt 26366869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 389 - 421
Target Start/End: Original strand, 28509388 - 28509420
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgta 421  Q
    |||||||||||| ||||||||||||||||||||    
T  28509388 gggcctaactcatccttacaaaaccggcttgta 28509420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 373 - 420
Target Start/End: Original strand, 29409949 - 29409997
Alignment:
Q  373 tcttagaatttgggccgggcctaactcaa-ccttacaaaaccggcttgt 420  Q
    ||||||||||| ||  ||||||||||||| |||||||||||||||||||    
T  29409949 tcttagaatttagggtgggcctaactcaacccttacaaaaccggcttgt 29409997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 389 - 425
Target Start/End: Complemental strand, 31789452 - 31789416
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||| ||| ||||||||||||||||||||||||    
T  31789452 gggcctaattcatccttacaaaaccggcttgtaaggt 31789416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 393 - 425
Target Start/End: Original strand, 33342283 - 33342315
Alignment:
Q  393 ctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||| ||||||||||||||||||||||||    
T  33342283 ctaactcatccttacaaaaccggcttgtaaggt 33342315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 389 - 425
Target Start/End: Original strand, 33879779 - 33879815
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||||||| |||||||||||| |||||||||||    
T  33879779 gggcctaactcatccttacaaaaccagcttgtaaggt 33879815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 389 - 425
Target Start/End: Complemental strand, 33964476 - 33964440
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||||||| |||||||||||| |||||||||||    
T  33964476 gggcctaactcatccttacaaaaccagcttgtaaggt 33964440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 389 - 425
Target Start/End: Original strand, 35024461 - 35024497
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    ||||||||| || ||||||||||||||||||||||||    
T  35024461 gggcctaacccatccttacaaaaccggcttgtaaggt 35024497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 389 - 425
Target Start/End: Original strand, 35926249 - 35926285
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||||||| |||||||||||| |||||||||||    
T  35926249 gggcctaactcatccttacaaaaccagcttgtaaggt 35926285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 389 - 425
Target Start/End: Original strand, 39649085 - 39649121
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||| ||||||| ||||||||||||||||||||||||    
T  39649085 gggcataactcatccttacaaaaccggcttgtaaggt 39649121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 389 - 425
Target Start/End: Complemental strand, 40571630 - 40571594
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||||||||||||||||||||  ||||||||||    
T  40571630 gggcctaactcaaccttacaaaaccaacttgtaaggt 40571594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 393 - 425
Target Start/End: Original strand, 43361557 - 43361589
Alignment:
Q  393 ctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||| ||||||||||||||||||||||||    
T  43361557 ctaactcatccttacaaaaccggcttgtaaggt 43361589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 393 - 425
Target Start/End: Original strand, 43361762 - 43361794
Alignment:
Q  393 ctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||| ||||||||||||||||||||||||    
T  43361762 ctaactcatccttacaaaaccggcttgtaaggt 43361794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 389 - 425
Target Start/End: Complemental strand, 43423382 - 43423346
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||||||| ||||||||||| ||||||||||||    
T  43423382 gggcctaactcatccttacaaaactggcttgtaaggt 43423346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 389 - 425
Target Start/End: Original strand, 48558322 - 48558358
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||| ||||||| ||||||||||||||||||||||||    
T  48558322 gggcttaactcatccttacaaaaccggcttgtaaggt 48558358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 389 - 425
Target Start/End: Original strand, 52846850 - 52846886
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||| ||||||| ||||||||||||||||||||||||    
T  52846850 gggcttaactcatccttacaaaaccggcttgtaaggt 52846886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 29)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 375 - 425
Target Start/End: Complemental strand, 30590565 - 30590515
Alignment:
Q  375 ttagaatttgggccgggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||||||||  ||||||| ||||||||||||||||||||||||||||    
T  30590565 ttagaatttgggctaggcctaagtcaaccttacaaaaccggcttgtaaggt 30590515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 373 - 425
Target Start/End: Complemental strand, 26642706 - 26642654
Alignment:
Q  373 tcttagaatttgggccgggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    ||||||||||||||  |||||||| |||||||||| |||||||||||||||||    
T  26642706 tcttagaatttgggttgggcctaaatcaaccttaccaaaccggcttgtaaggt 26642654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 375 - 425
Target Start/End: Original strand, 30966069 - 30966119
Alignment:
Q  375 ttagaatttgggccgggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    ||||||||||||  |||||||||||||  ||||||||||||||||||||||    
T  30966069 ttagaatttgggttgggcctaactcaaatttacaaaaccggcttgtaaggt 30966119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 389 - 425
Target Start/End: Complemental strand, 8559684 - 8559648
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||||||| ||||||||||||||||||||||||    
T  8559684 gggcctaactcatccttacaaaaccggcttgtaaggt 8559648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 389 - 425
Target Start/End: Original strand, 10989035 - 10989071
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||||||| ||||||||||||||||||||||||    
T  10989035 gggcctaactcatccttacaaaaccggcttgtaaggt 10989071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 389 - 425
Target Start/End: Original strand, 10989242 - 10989278
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||||||| ||||||||||||||||||||||||    
T  10989242 gggcctaactcatccttacaaaaccggcttgtaaggt 10989278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 389 - 425
Target Start/End: Original strand, 16454636 - 16454672
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||||||| ||||||||||||||||||||||||    
T  16454636 gggcctaactcatccttacaaaaccggcttgtaaggt 16454672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 389 - 425
Target Start/End: Complemental strand, 18905959 - 18905923
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||||||| ||||||||||||||||||||||||    
T  18905959 gggcctaactcatccttacaaaaccggcttgtaaggt 18905923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 389 - 425
Target Start/End: Complemental strand, 21653907 - 21653871
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||||||| ||||||||||||||||||||||||    
T  21653907 gggcctaactcatccttacaaaaccggcttgtaaggt 21653871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 389 - 425
Target Start/End: Complemental strand, 32931504 - 32931468
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||||||| ||||||||||||||||||||||||    
T  32931504 gggcctaactcatccttacaaaaccggcttgtaaggt 32931468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 389 - 425
Target Start/End: Complemental strand, 34248180 - 34248144
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||||||| ||||||||||||||||||||||||    
T  34248180 gggcctaactcatccttacaaaaccggcttgtaaggt 34248144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 389 - 425
Target Start/End: Complemental strand, 34248462 - 34248426
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||||||| ||||||||||||||||||||||||    
T  34248462 gggcctaactcatccttacaaaaccggcttgtaaggt 34248426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 389 - 425
Target Start/End: Complemental strand, 36997269 - 36997233
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||||||| ||||||||||||||||||||||||    
T  36997269 gggcctaactcatccttacaaaaccggcttgtaaggt 36997233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 389 - 425
Target Start/End: Complemental strand, 43599414 - 43599378
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||||||| ||||||||||||||||||||||||    
T  43599414 gggcctaactcatccttacaaaaccggcttgtaaggt 43599378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 389 - 425
Target Start/End: Original strand, 45031168 - 45031204
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    ||||||||||||||||||||||||||||||| |||||    
T  45031168 gggcctaactcaaccttacaaaaccggcttgaaaggt 45031204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 389 - 425
Target Start/End: Original strand, 45031377 - 45031413
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    ||||||||| |||||||||||||||||||||||||||    
T  45031377 gggcctaacacaaccttacaaaaccggcttgtaaggt 45031413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 378 - 425
Target Start/End: Complemental strand, 34622001 - 34621954
Alignment:
Q  378 gaatttgggccgggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||||  |||||||||||| |||||||| |||||||||||||||    
T  34622001 gaatttgggttgggcctaactcagccttacaacaccggcttgtaaggt 34621954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 390 - 425
Target Start/End: Original strand, 36993949 - 36993984
Alignment:
Q  390 ggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    ||||||||||| ||||||||||||||||||||||||    
T  36993949 ggcctaactcatccttacaaaaccggcttgtaaggt 36993984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 391 - 425
Target Start/End: Complemental strand, 21653428 - 21653394
Alignment:
Q  391 gcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||||| ||||||||||||||||||||||||    
T  21653428 gcctaactcatccttacaaaaccggcttgtaaggt 21653394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 389 - 425
Target Start/End: Original strand, 3183912 - 3183948
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||||||| | ||||||||||||||||||||||    
T  3183912 gggcctaactcatcgttacaaaaccggcttgtaaggt 3183948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 389 - 425
Target Start/End: Complemental strand, 7730009 - 7729973
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||||||| ||||||||||||||||||| ||||    
T  7730009 gggcctaactcatccttacaaaaccggcttgtgaggt 7729973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 389 - 421
Target Start/End: Complemental strand, 8276652 - 8276620
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgta 421  Q
    |||||||||||||| ||||||||||||||||||    
T  8276652 gggcctaactcaacattacaaaaccggcttgta 8276620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 389 - 425
Target Start/End: Original strand, 15010822 - 15010858
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||||||| ||||| ||||||||||||||||||    
T  15010822 gggcctaactcatccttataaaaccggcttgtaaggt 15010858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 389 - 425
Target Start/End: Original strand, 15011030 - 15011066
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||| ||||||| ||||||||||||||||||||||||    
T  15011030 gggcttaactcatccttacaaaaccggcttgtaaggt 15011066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 389 - 425
Target Start/End: Original strand, 20760661 - 20760697
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||||||| |||||||||||||| |||||||||    
T  20760661 gggcctaactcatccttacaaaaccggtttgtaaggt 20760697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 389 - 425
Target Start/End: Original strand, 25972322 - 25972358
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    ||||||||||||||| ||||||||| |||||||||||    
T  25972322 gggcctaactcaaccctacaaaacctgcttgtaaggt 25972358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 389 - 425
Target Start/End: Original strand, 30176465 - 30176501
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||||||| ||||||||||||||||||| ||||    
T  30176465 gggcctaactcatccttacaaaaccggcttgtgaggt 30176501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 389 - 425
Target Start/End: Original strand, 40902394 - 40902430
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||||| | ||||||||||||||||||||||||    
T  40902394 gggcctaacttatccttacaaaaccggcttgtaaggt 40902430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 389 - 421
Target Start/End: Original strand, 43984317 - 43984349
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgta 421  Q
    |||||||||||| ||||||||||||||||||||    
T  43984317 gggcctaactcatccttacaaaaccggcttgta 43984349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 37; Significance: 0.00000000001; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 371 - 423
Target Start/End: Original strand, 9592381 - 9592433
Alignment:
Q  371 attcttagaatttgggccgggcctaactcaaccttacaaaaccggcttgtaag 423  Q
    ||||||||||||||||  |||||| ||||||||||| ||||||||||||||||    
T  9592381 attcttagaatttgggatgggcctgactcaaccttagaaaaccggcttgtaag 9592433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 389 - 425
Target Start/End: Original strand, 1744843 - 1744879
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||||||| ||||||||||||||||||||||||    
T  1744843 gggcctaactcatccttacaaaaccggcttgtaaggt 1744879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 389 - 425
Target Start/End: Complemental strand, 8144120 - 8144084
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||||||| ||||||||||||||||||||||||    
T  8144120 gggcctaactcatccttacaaaaccggcttgtaaggt 8144084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 389 - 425
Target Start/End: Original strand, 10418339 - 10418375
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||||||| ||||||||||||||||||||||||    
T  10418339 gggcctaactcatccttacaaaaccggcttgtaaggt 10418375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 389 - 425
Target Start/End: Original strand, 10733439 - 10733475
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||||||| ||||||||||||||||||||||||    
T  10733439 gggcctaactcatccttacaaaaccggcttgtaaggt 10733475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 389 - 425
Target Start/End: Original strand, 15101112 - 15101148
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||||||| ||||||||||||||||||||||||    
T  15101112 gggcctaactcatccttacaaaaccggcttgtaaggt 15101148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 389 - 425
Target Start/End: Original strand, 16876831 - 16876867
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||||||| ||||||||||||||||||||||||    
T  16876831 gggcctaactcatccttacaaaaccggcttgtaaggt 16876867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 389 - 425
Target Start/End: Original strand, 16877011 - 16877047
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||||||| ||||||||||||||||||||||||    
T  16877011 gggcctaactcatccttacaaaaccggcttgtaaggt 16877047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 389 - 425
Target Start/End: Original strand, 24055110 - 24055146
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||||||| ||||||||||||||||||||||||    
T  24055110 gggcctaactcatccttacaaaaccggcttgtaaggt 24055146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 389 - 425
Target Start/End: Original strand, 27914327 - 27914363
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||||||| ||||||||||||||||||||||||    
T  27914327 gggcctaactcatccttacaaaaccggcttgtaaggt 27914363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 389 - 425
Target Start/End: Complemental strand, 28149896 - 28149860
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||||||| ||||||||||||||||||||||||    
T  28149896 gggcctaactcatccttacaaaaccggcttgtaaggt 28149860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 389 - 424
Target Start/End: Complemental strand, 1469064 - 1469029
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaagg 424  Q
    |||||||||||| |||||||||||||||||||||||    
T  1469064 gggcctaactcatccttacaaaaccggcttgtaagg 1469029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 389 - 420
Target Start/End: Complemental strand, 11316946 - 11316915
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgt 420  Q
    ||||||||||||||||||||||||||||||||    
T  11316946 gggcctaactcaaccttacaaaaccggcttgt 11316915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 390 - 425
Target Start/End: Original strand, 17147907 - 17147942
Alignment:
Q  390 ggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    ||||||||||| ||||||||||||||||||||||||    
T  17147907 ggcctaactcatccttacaaaaccggcttgtaaggt 17147942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 393 - 422
Target Start/End: Original strand, 5897422 - 5897451
Alignment:
Q  393 ctaactcaaccttacaaaaccggcttgtaa 422  Q
    ||||||||||||||||||||||||||||||    
T  5897422 ctaactcaaccttacaaaaccggcttgtaa 5897451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 374 - 422
Target Start/End: Original strand, 1205850 - 1205898
Alignment:
Q  374 cttagaatttgggccgggcctaactcaaccttacaaaaccggcttgtaa 422  Q
    |||||||||||||  ||  ||||||||||||||||| ||||||||||||    
T  1205850 cttagaatttgggttggagctaactcaaccttacaagaccggcttgtaa 1205898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 393 - 425
Target Start/End: Original strand, 5269278 - 5269310
Alignment:
Q  393 ctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||| ||||||||||||||||||||||||    
T  5269278 ctaactcatccttacaaaaccggcttgtaaggt 5269310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 389 - 425
Target Start/End: Original strand, 9601843 - 9601879
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||||||| ||||||| ||||||||||||||||    
T  9601843 gggcctaactcatccttacacaaccggcttgtaaggt 9601879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 389 - 425
Target Start/End: Original strand, 11313383 - 11313419
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||||||| ||||||||||| ||||||||||||    
T  11313383 gggcctaactcatccttacaaaactggcttgtaaggt 11313419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 389 - 425
Target Start/End: Original strand, 12134484 - 12134520
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||||||| |||||||||||||| |||||||||    
T  12134484 gggcctaactcatccttacaaaaccggtttgtaaggt 12134520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 393 - 425
Target Start/End: Complemental strand, 19054592 - 19054560
Alignment:
Q  393 ctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||| ||||||||||||||||||||||||    
T  19054592 ctaactcatccttacaaaaccggcttgtaaggt 19054560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 389 - 425
Target Start/End: Original strand, 19712405 - 19712441
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||||||| |||||||||| |||||||||||||    
T  19712405 gggcctaactcatccttacaaaatcggcttgtaaggt 19712441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 389 - 425
Target Start/End: Original strand, 19712610 - 19712646
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||||||| |||||||||||| |||||||||||    
T  19712610 gggcctaactcatccttacaaaaccagcttgtaaggt 19712646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 389 - 425
Target Start/End: Complemental strand, 24558686 - 24558650
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||||||| ||| ||||||||||||||||||||    
T  24558686 gggcctaactcatcctcacaaaaccggcttgtaaggt 24558650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 389 - 425
Target Start/End: Complemental strand, 24558891 - 24558855
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||||||| |||||||||||| |||||||||||    
T  24558891 gggcctaactcatccttacaaaaccagcttgtaaggt 24558855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 37; Significance: 0.00000000001; HSPs: 47)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 373 - 425
Target Start/End: Complemental strand, 30366731 - 30366679
Alignment:
Q  373 tcttagaatttgggccgggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||||||||   |||||||||||||||||||||| ||||||||||||||    
T  30366731 tcttagaatttggtttgggcctaactcaaccttacaaagccggcttgtaaggt 30366679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 373 - 425
Target Start/End: Original strand, 31973135 - 31973187
Alignment:
Q  373 tcttagaatttgggccgggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    ||||||||||||||  |||||||||| ||||||||||||||||| ||||||||    
T  31973135 tcttagaatttgggttgggcctaactgaaccttacaaaaccggcatgtaaggt 31973187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 374 - 425
Target Start/End: Complemental strand, 16275359 - 16275308
Alignment:
Q  374 cttagaatttgggccgggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||||||||| ||| |||||||||||||||||||||  ||||||||||    
T  16275359 cttagaatttgggctgggtctaactcaaccttacaaaaccaccttgtaaggt 16275308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 389 - 425
Target Start/End: Original strand, 48105 - 48141
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||||||| ||||||||||||||||||||||||    
T  48105 gggcctaactcatccttacaaaaccggcttgtaaggt 48141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 389 - 425
Target Start/End: Original strand, 48312 - 48348
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||||||| ||||||||||||||||||||||||    
T  48312 gggcctaactcatccttacaaaaccggcttgtaaggt 48348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 389 - 425
Target Start/End: Original strand, 1892091 - 1892127
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||||||| ||||||||||||||||||||||||    
T  1892091 gggcctaactcatccttacaaaaccggcttgtaaggt 1892127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 389 - 425
Target Start/End: Original strand, 2908770 - 2908806
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||||||| ||||||||||||||||||||||||    
T  2908770 gggcctaactcatccttacaaaaccggcttgtaaggt 2908806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 389 - 425
Target Start/End: Original strand, 3015622 - 3015658
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    ||||||||||||||||||||||||||||||| |||||    
T  3015622 gggcctaactcaaccttacaaaaccggcttgcaaggt 3015658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 389 - 425
Target Start/End: Complemental strand, 3763009 - 3762973
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||||||| ||||||||||||||||||||||||    
T  3763009 gggcctaactcatccttacaaaaccggcttgtaaggt 3762973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 389 - 425
Target Start/End: Original strand, 12965247 - 12965283
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||||||| ||||||||||||||||||||||||    
T  12965247 gggcctaactcatccttacaaaaccggcttgtaaggt 12965283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 389 - 425
Target Start/End: Complemental strand, 13413687 - 13413651
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||||||| ||||||||||||||||||||||||    
T  13413687 gggcctaactcatccttacaaaaccggcttgtaaggt 13413651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 389 - 425
Target Start/End: Complemental strand, 13843800 - 13843764
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||||||| ||||||||||||||||||||||||    
T  13843800 gggcctaactcatccttacaaaaccggcttgtaaggt 13843764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 389 - 425
Target Start/End: Original strand, 21633518 - 21633554
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    ||||||||||||||||||||||||||| |||||||||    
T  21633518 gggcctaactcaaccttacaaaaccggtttgtaaggt 21633554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 389 - 425
Target Start/End: Original strand, 21641765 - 21641801
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    ||||||||||||||||||||||||||| |||||||||    
T  21641765 gggcctaactcaaccttacaaaaccggtttgtaaggt 21641801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 389 - 425
Target Start/End: Complemental strand, 24918264 - 24918228
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||||||| ||||||||||||||||||||||||    
T  24918264 gggcctaactcatccttacaaaaccggcttgtaaggt 24918228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 389 - 425
Target Start/End: Complemental strand, 24994172 - 24994136
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||||||| ||||||||||||||||||||||||    
T  24994172 gggcctaactcatccttacaaaaccggcttgtaaggt 24994136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 389 - 425
Target Start/End: Original strand, 28358036 - 28358072
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||||||| ||||||||||||||||||||||||    
T  28358036 gggcctaactcatccttacaaaaccggcttgtaaggt 28358072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 389 - 425
Target Start/End: Complemental strand, 34457199 - 34457163
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||||||| ||||||||||||||||||||||||    
T  34457199 gggcctaactcatccttacaaaaccggcttgtaaggt 34457163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 389 - 425
Target Start/End: Complemental strand, 34457406 - 34457370
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||||||| ||||||||||||||||||||||||    
T  34457406 gggcctaactcatccttacaaaaccggcttgtaaggt 34457370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 389 - 425
Target Start/End: Original strand, 35526989 - 35527025
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||||||| ||||||||||||||||||||||||    
T  35526989 gggcctaactcatccttacaaaaccggcttgtaaggt 35527025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 389 - 425
Target Start/End: Original strand, 35527275 - 35527311
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||||||| ||||||||||||||||||||||||    
T  35527275 gggcctaactcatccttacaaaaccggcttgtaaggt 35527311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 389 - 425
Target Start/End: Original strand, 37656733 - 37656769
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||||||| ||||||||||||||||||||||||    
T  37656733 gggcctaactcatccttacaaaaccggcttgtaaggt 37656769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 389 - 425
Target Start/End: Original strand, 37995635 - 37995671
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||||||| ||||||||||||||||||||||||    
T  37995635 gggcctaactcatccttacaaaaccggcttgtaaggt 37995671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 389 - 425
Target Start/End: Complemental strand, 38131867 - 38131831
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||||||| ||||||||||||||||||||||||    
T  38131867 gggcctaactcatccttacaaaaccggcttgtaaggt 38131831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 389 - 425
Target Start/End: Complemental strand, 38376834 - 38376798
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||||||| ||||||||||||||||||||||||    
T  38376834 gggcctaactcatccttacaaaaccggcttgtaaggt 38376798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 389 - 425
Target Start/End: Complemental strand, 38663350 - 38663314
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||||||| ||||||||||||||||||||||||    
T  38663350 gggcctaactcatccttacaaaaccggcttgtaaggt 38663314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 389 - 425
Target Start/End: Original strand, 40169042 - 40169078
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||||||| ||||||||||||||||||||||||    
T  40169042 gggcctaactcatccttacaaaaccggcttgtaaggt 40169078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 373 - 416
Target Start/End: Original strand, 22198986 - 22199029
Alignment:
Q  373 tcttagaatttgggccgggcctaactcaaccttacaaaaccggc 416  Q
    ||||| ||||||||  ||||||||||||||||||||||||||||    
T  22198986 tcttaaaatttgggttgggcctaactcaaccttacaaaaccggc 22199029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 394 - 425
Target Start/End: Complemental strand, 27760173 - 27760142
Alignment:
Q  394 taactcaaccttacaaaaccggcttgtaaggt 425  Q
    ||||||||||||||||||||||||||||||||    
T  27760173 taactcaaccttacaaaaccggcttgtaaggt 27760142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 390 - 425
Target Start/End: Complemental strand, 29432514 - 29432479
Alignment:
Q  390 ggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    ||||||||||| ||||||||||||||||||||||||    
T  29432514 ggcctaactcatccttacaaaaccggcttgtaaggt 29432479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 389 - 419
Target Start/End: Original strand, 3015418 - 3015448
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttg 419  Q
    |||||||||||||||||||||||||||||||    
T  3015418 gggcctaactcaaccttacaaaaccggcttg 3015448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 391 - 425
Target Start/End: Complemental strand, 8397072 - 8397038
Alignment:
Q  391 gcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    ||||||||||||| |||||||||||||||||||||    
T  8397072 gcctaactcaaccctacaaaaccggcttgtaaggt 8397038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 389 - 425
Target Start/End: Original strand, 258841 - 258876
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||||||||| ||||||||||||||||||||||    
T  258841 gggcctaactcaac-ttacaaaaccggcttgtaaggt 258876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 389 - 425
Target Start/End: Original strand, 873697 - 873733
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||||||| |||||||||||| |||||||||||    
T  873697 gggcctaactcatccttacaaaacctgcttgtaaggt 873733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 389 - 425
Target Start/End: Original strand, 904754 - 904790
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||| ||||| ||||||||||||||||||||||||    
T  904754 gggcctgactcatccttacaaaaccggcttgtaaggt 904790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 389 - 425
Target Start/End: Complemental strand, 2716649 - 2716613
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||||||| ||||||||||||||||| ||||||    
T  2716649 gggcctaactcatccttacaaaaccggcttataaggt 2716613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 393 - 425
Target Start/End: Original strand, 2908567 - 2908599
Alignment:
Q  393 ctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||| ||||||||||||||||||||||||    
T  2908567 ctaactcatccttacaaaaccggcttgtaaggt 2908599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 389 - 425
Target Start/End: Complemental strand, 4796461 - 4796425
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||||||| |||||||||||| |||||||||||    
T  4796461 gggcctaactcatccttacaaaacccgcttgtaaggt 4796425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 373 - 425
Target Start/End: Original strand, 15844510 - 15844562
Alignment:
Q  373 tcttagaatttgggccgggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    ||||| ||||||||  ||||||||||||| |||||||||| |||| |||||||    
T  15844510 tcttaaaatttgggttgggcctaactcaatcttacaaaactggctagtaaggt 15844562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 389 - 421
Target Start/End: Original strand, 22196554 - 22196586
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgta 421  Q
    |||||||||||| ||||||||||||||||||||    
T  22196554 gggcctaactcatccttacaaaaccggcttgta 22196586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 393 - 425
Target Start/End: Complemental strand, 24125161 - 24125129
Alignment:
Q  393 ctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||| ||||||||||||||||||||||||    
T  24125161 ctaactcatccttacaaaaccggcttgtaaggt 24125129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 389 - 425
Target Start/End: Complemental strand, 28156133 - 28156097
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||| ||| ||||||||||||||||||||||||    
T  28156133 gggcctaattcatccttacaaaaccggcttgtaaggt 28156097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 389 - 425
Target Start/End: Original strand, 37781845 - 37781881
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||||||| |||||||||||| |||||||||||    
T  37781845 gggcctaactcatccttacaaaaccagcttgtaaggt 37781881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 375 - 419
Target Start/End: Original strand, 38069573 - 38069617
Alignment:
Q  375 ttagaatttgggccgggcctaactcaaccttacaaaaccggcttg 419  Q
    ||||||||||||  |||||||||||||||||| ||||| ||||||    
T  38069573 ttagaatttgggttgggcctaactcaaccttataaaacaggcttg 38069617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 389 - 425
Target Start/End: Original strand, 39205665 - 39205701
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||||||| ||||||||||||||||| ||||||    
T  39205665 gggcctaactcatccttacaaaaccggcttttaaggt 39205701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 389 - 425
Target Start/End: Original strand, 43490217 - 43490253
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||||||| ||| ||||||||||||||||||||    
T  43490217 gggcctaactcatcctcacaaaaccggcttgtaaggt 43490253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 389 - 425
Target Start/End: Original strand, 43490464 - 43490500
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||||||| |||||||||||||||||| |||||    
T  43490464 gggcctaactcatccttacaaaaccggcttggaaggt 43490500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 37; Significance: 0.00000000001; HSPs: 54)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 373 - 425
Target Start/End: Original strand, 30490939 - 30490991
Alignment:
Q  373 tcttagaatttgggccgggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    ||||||||||||||  ||||||||||||||||||| ||| |||||||||||||    
T  30490939 tcttagaatttgggttgggcctaactcaaccttacgaaaacggcttgtaaggt 30490991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 389 - 425
Target Start/End: Original strand, 35399258 - 35399294
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||||||||||||||||||||||||||||||||    
T  35399258 gggcctaactcaaccttacaaaaccggcttgtaaggt 35399294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 389 - 425
Target Start/End: Original strand, 35399417 - 35399453
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||||||||||||||||||||||||||||||||    
T  35399417 gggcctaactcaaccttacaaaaccggcttgtaaggt 35399453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 372 - 425
Target Start/End: Original strand, 22823889 - 22823942
Alignment:
Q  372 ttcttagaatttgggccgggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||| || |||||  ||||||||||||||| |||||||||||||||||||||    
T  22823889 ttcttataaattggggtgggcctaactcaaccgtacaaaaccggcttgtaaggt 22823942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 389 - 425
Target Start/End: Original strand, 12016684 - 12016720
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||||||| ||||||||||||||||||||||||    
T  12016684 gggcctaactcatccttacaaaaccggcttgtaaggt 12016720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 389 - 425
Target Start/End: Original strand, 12016892 - 12016928
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||||||| ||||||||||||||||||||||||    
T  12016892 gggcctaactcatccttacaaaaccggcttgtaaggt 12016928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 389 - 425
Target Start/End: Original strand, 17077145 - 17077181
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    ||||||||||||||||||||||||||||||| |||||    
T  17077145 gggcctaactcaaccttacaaaaccggcttgcaaggt 17077181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 373 - 421
Target Start/End: Complemental strand, 17912860 - 17912812
Alignment:
Q  373 tcttagaatttgggccgggcctaactcaaccttacaaaaccggcttgta 421  Q
    ||||| ||||||||  ||||||||||||||| |||||||||||||||||    
T  17912860 tcttaaaatttgggttgggcctaactcaaccctacaaaaccggcttgta 17912812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 389 - 425
Target Start/End: Original strand, 21497684 - 21497720
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||||||| ||||||||||||||||||||||||    
T  21497684 gggcctaactcatccttacaaaaccggcttgtaaggt 21497720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 389 - 425
Target Start/End: Complemental strand, 21498290 - 21498254
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||||||| ||||||||||||||||||||||||    
T  21498290 gggcctaactcatccttacaaaaccggcttgtaaggt 21498254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 389 - 425
Target Start/End: Complemental strand, 21498634 - 21498598
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||||||| ||||||||||||||||||||||||    
T  21498634 gggcctaactcatccttacaaaaccggcttgtaaggt 21498598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 389 - 425
Target Start/End: Complemental strand, 23018573 - 23018537
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||||||| ||||||||||||||||||||||||    
T  23018573 gggcctaactcatccttacaaaaccggcttgtaaggt 23018537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 389 - 425
Target Start/End: Complemental strand, 28395280 - 28395244
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||||||| ||||||||||||||||||||||||    
T  28395280 gggcctaactcatccttacaaaaccggcttgtaaggt 28395244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 389 - 425
Target Start/End: Original strand, 29669364 - 29669400
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||||||| ||||||||||||||||||||||||    
T  29669364 gggcctaactcatccttacaaaaccggcttgtaaggt 29669400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 389 - 425
Target Start/End: Original strand, 36558467 - 36558503
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||||||| ||||||||||||||||||||||||    
T  36558467 gggcctaactcatccttacaaaaccggcttgtaaggt 36558503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 389 - 425
Target Start/End: Complemental strand, 41176809 - 41176773
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||||||| ||||||||||||||||||||||||    
T  41176809 gggcctaactcatccttacaaaaccggcttgtaaggt 41176773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 389 - 425
Target Start/End: Complemental strand, 43943776 - 43943740
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||||||| ||||||||||||||||||||||||    
T  43943776 gggcctaactcatccttacaaaaccggcttgtaaggt 43943740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 389 - 425
Target Start/End: Complemental strand, 43972458 - 43972422
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||||||| ||||||||||||||||||||||||    
T  43972458 gggcctaactcatccttacaaaaccggcttgtaaggt 43972422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 389 - 425
Target Start/End: Original strand, 45427253 - 45427289
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||||||| ||||||||||||||||||||||||    
T  45427253 gggcctaactcatccttacaaaaccggcttgtaaggt 45427289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 389 - 425
Target Start/End: Complemental strand, 48046460 - 48046424
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||||||||| ||||||||||||||||||||||    
T  48046460 gggcctaactcaacgttacaaaaccggcttgtaaggt 48046424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 389 - 425
Target Start/End: Complemental strand, 50858115 - 50858079
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||||||| ||||||||||||||||||||||||    
T  50858115 gggcctaactcatccttacaaaaccggcttgtaaggt 50858079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 389 - 425
Target Start/End: Complemental strand, 51470586 - 51470550
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||||||| ||||||||||||||||||||||||    
T  51470586 gggcctaactcatccttacaaaaccggcttgtaaggt 51470550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 389 - 425
Target Start/End: Complemental strand, 52214718 - 52214682
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||||||| ||||||||||||||||||||||||    
T  52214718 gggcctaactcatccttacaaaaccggcttgtaaggt 52214682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 389 - 425
Target Start/End: Complemental strand, 53740285 - 53740249
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||||||| ||||||||||||||||||||||||    
T  53740285 gggcctaactcatccttacaaaaccggcttgtaaggt 53740249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 390 - 425
Target Start/End: Complemental strand, 5488469 - 5488434
Alignment:
Q  390 ggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    ||||||||||| ||||||||||||||||||||||||    
T  5488469 ggcctaactcatccttacaaaaccggcttgtaaggt 5488434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 390 - 425
Target Start/End: Complemental strand, 6778504 - 6778469
Alignment:
Q  390 ggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    ||||||||||||||||||||||||||||||| ||||    
T  6778504 ggcctaactcaaccttacaaaaccggcttgtgaggt 6778469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 390 - 425
Target Start/End: Complemental strand, 15665255 - 15665220
Alignment:
Q  390 ggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    ||||||||||| ||||||||||||||||||||||||    
T  15665255 ggcctaactcatccttacaaaaccggcttgtaaggt 15665220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 375 - 414
Target Start/End: Original strand, 50830704 - 50830743
Alignment:
Q  375 ttagaatttgggccgggcctaactcaaccttacaaaaccg 414  Q
    ||||||||||||  ||||||||||||||||||||||||||    
T  50830704 ttagaatttgggttgggcctaactcaaccttacaaaaccg 50830743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 389 - 419
Target Start/End: Original strand, 17076941 - 17076971
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttg 419  Q
    |||||||||||||||||||||||||||||||    
T  17076941 gggcctaactcaaccttacaaaaccggcttg 17076971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 391 - 425
Target Start/End: Original strand, 28496508 - 28496542
Alignment:
Q  391 gcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||||| ||||||||||||||||||||||||    
T  28496508 gcctaactcatccttacaaaaccggcttgtaaggt 28496542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 389 - 423
Target Start/End: Complemental strand, 50858428 - 50858394
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaag 423  Q
    |||||||||||| ||||||||||||||||||||||    
T  50858428 gggcctaactcatccttacaaaaccggcttgtaag 50858394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 392 - 425
Target Start/End: Original strand, 25753609 - 25753642
Alignment:
Q  392 cctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    ||||||||| ||||||||||||||||||||||||    
T  25753609 cctaactcatccttacaaaaccggcttgtaaggt 25753642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 392 - 425
Target Start/End: Original strand, 27048412 - 27048445
Alignment:
Q  392 cctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    ||||||||| ||||||||||||||||||||||||    
T  27048412 cctaactcatccttacaaaaccggcttgtaaggt 27048445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 391 - 424
Target Start/End: Complemental strand, 35565179 - 35565146
Alignment:
Q  391 gcctaactcaaccttacaaaaccggcttgtaagg 424  Q
    |||||||||| |||||||||||||||||||||||    
T  35565179 gcctaactcatccttacaaaaccggcttgtaagg 35565146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 395 - 424
Target Start/End: Complemental strand, 39111004 - 39110975
Alignment:
Q  395 aactcaaccttacaaaaccggcttgtaagg 424  Q
    ||||||||||||||||||||||||||||||    
T  39111004 aactcaaccttacaaaaccggcttgtaagg 39110975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 389 - 422
Target Start/End: Complemental strand, 54210480 - 54210447
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaa 422  Q
    |||||||||||| |||||||||||||||||||||    
T  54210480 gggcctaactcatccttacaaaaccggcttgtaa 54210447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 389 - 425
Target Start/End: Complemental strand, 990650 - 990614
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||||||| ||||||||||||| ||||||||||    
T  990650 gggcctaactcatccttacaaaaccgacttgtaaggt 990614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 393 - 425
Target Start/End: Complemental strand, 991303 - 991271
Alignment:
Q  393 ctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||| ||||||||||||||||||||||||    
T  991303 ctaactcatccttacaaaaccggcttgtaaggt 991271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 393 - 425
Target Start/End: Original strand, 6778681 - 6778713
Alignment:
Q  393 ctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||||||||||||||||||||||| ||||    
T  6778681 ctaactcaaccttacaaaaccggcttgtgaggt 6778713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 389 - 425
Target Start/End: Original strand, 18435927 - 18435963
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    ||||||||| || ||||||||||||||||||||||||    
T  18435927 gggcctaacacatccttacaaaaccggcttgtaaggt 18435963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 389 - 425
Target Start/End: Original strand, 23311471 - 23311507
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||| ||| ||||||||||||||||||||||||    
T  23311471 gggcctaagtcatccttacaaaaccggcttgtaaggt 23311507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 389 - 425
Target Start/End: Original strand, 26942873 - 26942909
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||||||| |||||||||| |||||||||||||    
T  26942873 gggcctaactcatccttacaaaatcggcttgtaaggt 26942909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 389 - 425
Target Start/End: Original strand, 27048138 - 27048174
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||||||| |||||||||||||||||| |||||    
T  27048138 gggcctaactcatccttacaaaaccggcttgcaaggt 27048174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 389 - 425
Target Start/End: Original strand, 27634327 - 27634363
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||||||| |||||||||| |||||||||||||    
T  27634327 gggcctaactcatccttacaaaatcggcttgtaaggt 27634363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 389 - 425
Target Start/End: Complemental strand, 28245891 - 28245855
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||||||| |||||||||||||||||| |||||    
T  28245891 gggcctaactcatccttacaaaaccggcttgcaaggt 28245855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 389 - 425
Target Start/End: Complemental strand, 29113552 - 29113516
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||||||| |||||||||||| |||||||||||    
T  29113552 gggcctaactcatccttacaaaaccagcttgtaaggt 29113516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 389 - 425
Target Start/End: Complemental strand, 29734664 - 29734628
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    ||||| |||||| ||||||||||||||||||||||||    
T  29734664 gggcccaactcatccttacaaaaccggcttgtaaggt 29734628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 389 - 425
Target Start/End: Original strand, 34206256 - 34206292
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||||||| |||||| |||||||||||||||||    
T  34206256 gggcctaactcatccttacgaaaccggcttgtaaggt 34206292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 387 - 423
Target Start/End: Original strand, 37130149 - 37130185
Alignment:
Q  387 ccgggcctaactcaaccttacaaaaccggcttgtaag 423  Q
    |||||||||| |||||| |||||||||||||||||||    
T  37130149 ccgggcctaagtcaaccctacaaaaccggcttgtaag 37130185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 389 - 425
Target Start/End: Original strand, 45426937 - 45426973
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||||||| ||||||||||||| ||||||||||    
T  45426937 gggcctaactcatccttacaaaaccgacttgtaaggt 45426973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 389 - 425
Target Start/End: Complemental strand, 51469584 - 51469548
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||||||| ||||||| ||||||||||||||||    
T  51469584 gggcctaactcatccttacacaaccggcttgtaaggt 51469548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 389 - 421
Target Start/End: Complemental strand, 51470747 - 51470715
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgta 421  Q
    |||||||||||| ||||||||||||||||||||    
T  51470747 gggcctaactcatccttacaaaaccggcttgta 51470715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 389 - 425
Target Start/End: Original strand, 52827233 - 52827269
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||| ||||| ||||||||||||||||||||||||    
T  52827233 gggcctgactcatccttacaaaaccggcttgtaaggt 52827269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 393 - 425
Target Start/End: Complemental strand, 55253381 - 55253349
Alignment:
Q  393 ctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||||||||||||||||| ||||||||||    
T  55253381 ctaactcaaccttacaaaaccgacttgtaaggt 55253349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 37; Significance: 0.00000000001; HSPs: 56)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 389 - 425
Target Start/End: Complemental strand, 41380826 - 41380790
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||||||||||||||||||||||||||||||||    
T  41380826 gggcctaactcaaccttacaaaaccggcttgtaaggt 41380790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 373 - 424
Target Start/End: Original strand, 39225010 - 39225061
Alignment:
Q  373 tcttagaatttgggccgggcctaactcaaccttacaaaaccggcttgtaagg 424  Q
    ||||||||||||||  ||||||||||||||||||||| ||||| ||||||||    
T  39225010 tcttagaatttgggttgggcctaactcaaccttacaagaccggtttgtaagg 39225061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 389 - 425
Target Start/End: Complemental strand, 3985876 - 3985840
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||||||| ||||||||||||||||||||||||    
T  3985876 gggcctaactcatccttacaaaaccggcttgtaaggt 3985840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 389 - 425
Target Start/End: Original strand, 4191123 - 4191159
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||||||| ||||||||||||||||||||||||    
T  4191123 gggcctaactcatccttacaaaaccggcttgtaaggt 4191159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 389 - 425
Target Start/End: Original strand, 9264087 - 9264123
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||||||| ||||||||||||||||||||||||    
T  9264087 gggcctaactcatccttacaaaaccggcttgtaaggt 9264123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 389 - 425
Target Start/End: Original strand, 9264294 - 9264330
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||||||| ||||||||||||||||||||||||    
T  9264294 gggcctaactcatccttacaaaaccggcttgtaaggt 9264330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 389 - 425
Target Start/End: Original strand, 22407442 - 22407478
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||||||| ||||||||||||||||||||||||    
T  22407442 gggcctaactcatccttacaaaaccggcttgtaaggt 22407478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 389 - 425
Target Start/End: Original strand, 22407649 - 22407685
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||||||| ||||||||||||||||||||||||    
T  22407649 gggcctaactcatccttacaaaaccggcttgtaaggt 22407685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 389 - 425
Target Start/End: Original strand, 31564004 - 31564040
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||||||||| ||||||||||||||||||||||    
T  31564004 gggcctaactcaactttacaaaaccggcttgtaaggt 31564040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 389 - 425
Target Start/End: Original strand, 39078772 - 39078808
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||||||| ||||||||||||||||||||||||    
T  39078772 gggcctaactcatccttacaaaaccggcttgtaaggt 39078808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 389 - 425
Target Start/End: Original strand, 40230436 - 40230472
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    ||||||||||||||||||||||||||||| |||||||    
T  40230436 gggcctaactcaaccttacaaaaccggctcgtaaggt 40230472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 389 - 425
Target Start/End: Original strand, 40230640 - 40230676
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||| ||||||||||||||||||||||||||||||||    
T  40230640 gggcttaactcaaccttacaaaaccggcttgtaaggt 40230676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 389 - 425
Target Start/End: Complemental strand, 44573742 - 44573706
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||||||| ||||||||||||||||||||||||    
T  44573742 gggcctaactcatccttacaaaaccggcttgtaaggt 44573706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 389 - 425
Target Start/End: Complemental strand, 44574039 - 44574003
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||||||| ||||||||||||||||||||||||    
T  44574039 gggcctaactcatccttacaaaaccggcttgtaaggt 44574003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 389 - 425
Target Start/End: Complemental strand, 49477430 - 49477394
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||||||| ||||||||||||||||||||||||    
T  49477430 gggcctaactcatccttacaaaaccggcttgtaaggt 49477394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 389 - 425
Target Start/End: Complemental strand, 49477637 - 49477601
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||||||| ||||||||||||||||||||||||    
T  49477637 gggcctaactcatccttacaaaaccggcttgtaaggt 49477601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 393 - 425
Target Start/End: Original strand, 50338387 - 50338419
Alignment:
Q  393 ctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||||||||||||||||||||||||||||    
T  50338387 ctaactcaaccttacaaaaccggcttgtaaggt 50338419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 389 - 425
Target Start/End: Complemental strand, 50692426 - 50692390
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||||||| ||||||||||||||||||||||||    
T  50692426 gggcctaactcatccttacaaaaccggcttgtaaggt 50692390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 389 - 425
Target Start/End: Complemental strand, 50692629 - 50692593
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||||||| ||||||||||||||||||||||||    
T  50692629 gggcctaactcatccttacaaaaccggcttgtaaggt 50692593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 389 - 425
Target Start/End: Original strand, 51338404 - 51338440
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||||||| ||||||||||||||||||||||||    
T  51338404 gggcctaactcatccttacaaaaccggcttgtaaggt 51338440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 389 - 425
Target Start/End: Original strand, 51642429 - 51642465
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||||||| ||||||||||||||||||||||||    
T  51642429 gggcctaactcatccttacaaaaccggcttgtaaggt 51642465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 389 - 425
Target Start/End: Original strand, 51642636 - 51642672
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||||||| ||||||||||||||||||||||||    
T  51642636 gggcctaactcatccttacaaaaccggcttgtaaggt 51642672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 391 - 425
Target Start/End: Original strand, 10453706 - 10453740
Alignment:
Q  391 gcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||||| ||||||||||||||||||||||||    
T  10453706 gcctaactcatccttacaaaaccggcttgtaaggt 10453740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 391 - 425
Target Start/End: Original strand, 39956677 - 39956711
Alignment:
Q  391 gcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||||| ||||||||||||||||||||||||    
T  39956677 gcctaactcatccttacaaaaccggcttgtaaggt 39956711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 371 - 425
Target Start/End: Complemental strand, 49812499 - 49812445
Alignment:
Q  371 attcttagaatttgggccgggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||||||| ||| |||||||||||||| ||||||||||   ||||||||||    
T  49812499 attcttagaattcgggtcgggcctaactcaagcttacaaaactaacttgtaaggt 49812445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 389 - 422
Target Start/End: Complemental strand, 4256022 - 4255989
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaa 422  Q
    |||||||||||| |||||||||||||||||||||    
T  4256022 gggcctaactcatccttacaaaaccggcttgtaa 4255989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 389 - 422
Target Start/End: Original strand, 9264501 - 9264534
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaa 422  Q
    |||||||||||| |||||||||||||||||||||    
T  9264501 gggcctaactcatccttacaaaaccggcttgtaa 9264534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 391 - 424
Target Start/End: Original strand, 33909836 - 33909869
Alignment:
Q  391 gcctaactcaaccttacaaaaccggcttgtaagg 424  Q
    |||||||||| |||||||||||||||||||||||    
T  33909836 gcctaactcatccttacaaaaccggcttgtaagg 33909869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 392 - 425
Target Start/End: Original strand, 38300287 - 38300320
Alignment:
Q  392 cctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    ||||||||| ||||||||||||||||||||||||    
T  38300287 cctaactcatccttacaaaaccggcttgtaaggt 38300320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 389 - 425
Target Start/End: Original strand, 4029645 - 4029681
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||||||| |||||||||||||| |||||||||    
T  4029645 gggcctaactcatccttacaaaaccggtttgtaaggt 4029681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 389 - 425
Target Start/End: Complemental strand, 9179236 - 9179200
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||||||| ||||||||||||| ||||||||||    
T  9179236 gggcctaactcatccttacaaaaccgacttgtaaggt 9179200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 389 - 425
Target Start/End: Original strand, 13769292 - 13769328
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||||||| |||||||||||| |||||||||||    
T  13769292 gggcctaactcatccttacaaaaccagcttgtaaggt 13769328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 389 - 425
Target Start/End: Complemental strand, 21750578 - 21750542
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||||||| ||||||||||| ||||||||||||    
T  21750578 gggcctaactcatccttacaaaactggcttgtaaggt 21750542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 389 - 425
Target Start/End: Original strand, 21832200 - 21832236
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||||||| ||||||||||||||||||| ||||    
T  21832200 gggcctaactcatccttacaaaaccggcttgtgaggt 21832236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 389 - 425
Target Start/End: Complemental strand, 22339844 - 22339808
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||||||| ||||||||||||| ||||||||||    
T  22339844 gggcctaactcatccttacaaaaccgacttgtaaggt 22339808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 389 - 425
Target Start/End: Complemental strand, 24539257 - 24539221
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||||||| |||||||||| |||||||||||||    
T  24539257 gggcctaactcatccttacaaaatcggcttgtaaggt 24539221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 389 - 425
Target Start/End: Complemental strand, 29369894 - 29369858
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||||||| |||||| |||||||||||||||||    
T  29369894 gggcctaactcatccttactaaaccggcttgtaaggt 29369858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 373 - 425
Target Start/End: Complemental strand, 30326990 - 30326938
Alignment:
Q  373 tcttagaatttgggccgggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    ||||||||| ||||  |||||||||| || || ||||||||||||||||||||    
T  30326990 tcttagaatctgggttgggcctaacttaaactcacaaaaccggcttgtaaggt 30326938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 372 - 412
Target Start/End: Complemental strand, 31151872 - 31151832
Alignment:
Q  372 ttcttagaatttgggccgggcctaactcaaccttacaaaac 412  Q
    |||||||||| ||||  ||||||||||||||||||||||||    
T  31151872 ttcttagaatatgggttgggcctaactcaaccttacaaaac 31151832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 393 - 425
Target Start/End: Original strand, 31563704 - 31563736
Alignment:
Q  393 ctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||||||||||||||||||||| ||||||    
T  31563704 ctaactcaaccttacaaaaccggcttctaaggt 31563736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 389 - 425
Target Start/End: Original strand, 34250353 - 34250389
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||||||| ||||||||||||| ||||||||||    
T  34250353 gggcctaactcatccttacaaaaccgacttgtaaggt 34250389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 389 - 425
Target Start/End: Original strand, 34356843 - 34356879
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||| ||||||| ||||||||||||||||||||||||    
T  34356843 gggcataactcatccttacaaaaccggcttgtaaggt 34356879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 389 - 425
Target Start/End: Original strand, 34715456 - 34715492
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||| ||||||| ||||||||||||||||||||||||    
T  34715456 gggcataactcatccttacaaaaccggcttgtaaggt 34715492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 389 - 425
Target Start/End: Original strand, 37058772 - 37058808
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||||||| |||||||||||||| |||||||||    
T  37058772 gggcctaactcatccttacaaaaccggtttgtaaggt 37058808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 393 - 425
Target Start/End: Complemental strand, 38422082 - 38422050
Alignment:
Q  393 ctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    ||||||||||||||||||| |||||||||||||    
T  38422082 ctaactcaaccttacaaaatcggcttgtaaggt 38422050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 389 - 425
Target Start/End: Complemental strand, 40302124 - 40302088
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||| ||||||| ||||||||||||||||||||||||    
T  40302124 gggcttaactcatccttacaaaaccggcttgtaaggt 40302088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 389 - 425
Target Start/End: Original strand, 40337877 - 40337913
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||||||| |||||||||| |||||||||||||    
T  40337877 gggcctaactcatccttacaaaatcggcttgtaaggt 40337913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 389 - 421
Target Start/End: Complemental strand, 44573429 - 44573397
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgta 421  Q
    |||||||||||| ||||||||||||||||||||    
T  44573429 gggcctaactcatccttacaaaaccggcttgta 44573397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 389 - 425
Target Start/End: Complemental strand, 45443383 - 45443347
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||||||| ||||| ||||||||||||||||||    
T  45443383 gggcctaactcatccttaaaaaaccggcttgtaaggt 45443347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 389 - 425
Target Start/End: Complemental strand, 48407588 - 48407552
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||| ||||||| ||||||||||||||||||||||||    
T  48407588 gggcataactcatccttacaaaaccggcttgtaaggt 48407552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 389 - 421
Target Start/End: Original strand, 48685313 - 48685345
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgta 421  Q
    |||||||||||| ||||||||||||||||||||    
T  48685313 gggcctaactcatccttacaaaaccggcttgta 48685345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 373 - 425
Target Start/End: Complemental strand, 49812276 - 49812224
Alignment:
Q  373 tcttagaatttgggccgggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    ||||||||||| |   |||||||||||||| |||||||| |||||||||||||    
T  49812276 tcttagaattttgattgggcctaactcaactttacaaaatcggcttgtaaggt 49812224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 389 - 425
Target Start/End: Complemental strand, 50057132 - 50057096
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||||||| ||||||||||| ||||||||||||    
T  50057132 gggcctaactcatccttacaaaactggcttgtaaggt 50057096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 373 - 425
Target Start/End: Original strand, 50187402 - 50187454
Alignment:
Q  373 tcttagaatttgggccgggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||||||| |  ||||||||||||||||||| |||| | ||||||||||    
T  50187402 tcttagaatttgagttgggcctaactcaaccttactaaactgacttgtaaggt 50187454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 393 - 425
Target Start/End: Original strand, 51338446 - 51338478
Alignment:
Q  393 ctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||| ||||||||||||||||||||||||    
T  51338446 ctaactcatccttacaaaaccggcttgtaaggt 51338478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 389 - 417
Target Start/End: Original strand, 53761399 - 53761427
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggct 417  Q
    |||||||||||||||||||||||||||||    
T  53761399 gggcctaactcaaccttacaaaaccggct 53761427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 34; Significance: 0.0000000006; HSPs: 34)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 373 - 422
Target Start/End: Original strand, 39079926 - 39079975
Alignment:
Q  373 tcttagaatttgggccgggcctaactcaaccttacaaaaccggcttgtaa 422  Q
    ||||| ||||||||  |||||||||| |||||||||||||||||||||||    
T  39079926 tcttaaaatttgggttgggcctaactaaaccttacaaaaccggcttgtaa 39079975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 389 - 425
Target Start/End: Original strand, 1663605 - 1663641
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||||||| ||||||||||||||||||||||||    
T  1663605 gggcctaactcatccttacaaaaccggcttgtaaggt 1663641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 389 - 425
Target Start/End: Complemental strand, 6783141 - 6783105
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||||||| ||||||||||||||||||||||||    
T  6783141 gggcctaactcatccttacaaaaccggcttgtaaggt 6783105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 389 - 425
Target Start/End: Complemental strand, 23396712 - 23396676
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||||||| ||||||||||||||||||||||||    
T  23396712 gggcctaactcatccttacaaaaccggcttgtaaggt 23396676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 389 - 425
Target Start/End: Original strand, 36092393 - 36092429
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||||||| ||||||||||||||||||||||||    
T  36092393 gggcctaactcatccttacaaaaccggcttgtaaggt 36092429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 388 - 424
Target Start/End: Complemental strand, 36238308 - 36238272
Alignment:
Q  388 cgggcctaactcaaccttacaaaaccggcttgtaagg 424  Q
    ||||||||||||| |||||||||||||||||||||||    
T  36238308 cgggcctaactcatccttacaaaaccggcttgtaagg 36238272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 389 - 425
Target Start/End: Complemental strand, 41670936 - 41670900
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||||||| ||||||||||||||||||||||||    
T  41670936 gggcctaactcatccttacaaaaccggcttgtaaggt 41670900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 389 - 425
Target Start/End: Original strand, 43384281 - 43384317
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||||||| ||||||||||||||||||||||||    
T  43384281 gggcctaactcatccttacaaaaccggcttgtaaggt 43384317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 390 - 425
Target Start/End: Complemental strand, 27820948 - 27820913
Alignment:
Q  390 ggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    ||||||||||||||||||||||| ||||||||||||    
T  27820948 ggcctaactcaaccttacaaaactggcttgtaaggt 27820913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 390 - 425
Target Start/End: Complemental strand, 32000919 - 32000884
Alignment:
Q  390 ggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    ||||||||||| ||||||||||||||||||||||||    
T  32000919 ggcctaactcatccttacaaaaccggcttgtaaggt 32000884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 373 - 420
Target Start/End: Original strand, 38963368 - 38963415
Alignment:
Q  373 tcttagaatttgggccgggcctaactcaaccttacaaaaccggcttgt 420  Q
    ||||||||||||||  | ||||||||||||||||| ||||||||||||    
T  38963368 tcttagaatttgggttgagcctaactcaaccttaccaaaccggcttgt 38963415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 391 - 425
Target Start/End: Original strand, 23821363 - 23821397
Alignment:
Q  391 gcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||||| ||||||||||||||||||||||||    
T  23821363 gcctaactcatccttacaaaaccggcttgtaaggt 23821397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 389 - 423
Target Start/End: Original strand, 35866640 - 35866674
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaag 423  Q
    |||||||||||| ||||||||||||||||||||||    
T  35866640 gggcctaactcatccttacaaaaccggcttgtaag 35866674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 391 - 425
Target Start/End: Original strand, 48116299 - 48116333
Alignment:
Q  391 gcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||||| ||||||||||||||||||||||||    
T  48116299 gcctaactcatccttacaaaaccggcttgtaaggt 48116333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 392 - 425
Target Start/End: Original strand, 14595885 - 14595918
Alignment:
Q  392 cctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    ||||||||||||||||||||||||||| ||||||    
T  14595885 cctaactcaaccttacaaaaccggcttttaaggt 14595918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 371 - 424
Target Start/End: Original strand, 25589054 - 25589107
Alignment:
Q  371 attcttagaatttgggccgggcctaactcaaccttacaaaaccggcttgtaagg 424  Q
    ||||||||||||||||  || |||||||||   |||||||||||||||||||||    
T  25589054 attcttagaatttgggttggacctaactcagtattacaaaaccggcttgtaagg 25589107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 392 - 425
Target Start/End: Original strand, 39079640 - 39079673
Alignment:
Q  392 cctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    ||||||||||||||||||||||||||||| ||||    
T  39079640 cctaactcaaccttacaaaaccggcttgttaggt 39079673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 376 - 425
Target Start/End: Complemental strand, 39164743 - 39164694
Alignment:
Q  376 tagaatttgggccgggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||||||  |||||||||||||||||| ||||| || |||||||||    
T  39164743 tagaatttgggttgggcctaactcaaccttataaaactggtttgtaaggt 39164694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 388 - 425
Target Start/End: Original strand, 40137696 - 40137733
Alignment:
Q  388 cgggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    ||||||||||||| |||||||||||||||| |||||||    
T  40137696 cgggcctaactcatccttacaaaaccggctcgtaaggt 40137733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 389 - 425
Target Start/End: Original strand, 257268 - 257304
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||||||| |||||||||||||||| |||||||    
T  257268 gggcctaactcatccttacaaaaccggctagtaaggt 257304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 389 - 425
Target Start/End: Complemental strand, 1596896 - 1596860
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    ||||||||| ||||| |||||||||||||||||||||    
T  1596896 gggcctaacacaaccctacaaaaccggcttgtaaggt 1596860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 389 - 425
Target Start/End: Original strand, 1661192 - 1661228
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    ||||||||||||  |||||||||||||||||||||||    
T  1661192 gggcctaactcattcttacaaaaccggcttgtaaggt 1661228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 389 - 425
Target Start/End: Original strand, 7135244 - 7135280
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||||||| | ||||||||||||||||||||||    
T  7135244 gggcctaactcatctttacaaaaccggcttgtaaggt 7135280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 389 - 425
Target Start/End: Original strand, 14596194 - 14596229
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    ||||||||||||||||||| |||||||||||||||||    
T  14596194 gggcctaactcaaccttac-aaaccggcttgtaaggt 14596229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 389 - 425
Target Start/End: Original strand, 21033621 - 21033657
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    ||||||||||||||||||||||||| || ||||||||    
T  21033621 gggcctaactcaaccttacaaaaccagcatgtaaggt 21033657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 373 - 425
Target Start/End: Original strand, 21048694 - 21048746
Alignment:
Q  373 tcttagaatttgggccgggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    ||||||||||||||  | |||||||||||||||| ||||  ||||||||||||    
T  21048694 tcttagaatttgggttgagcctaactcaaccttataaaattggcttgtaaggt 21048746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 393 - 425
Target Start/End: Complemental strand, 28910131 - 28910099
Alignment:
Q  393 ctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||| ||||||||||||||||||||||||    
T  28910131 ctaactcatccttacaaaaccggcttgtaaggt 28910099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 393 - 425
Target Start/End: Complemental strand, 28910264 - 28910232
Alignment:
Q  393 ctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||| ||||||||||||||||||||||||    
T  28910264 ctaactcatccttacaaaaccggcttgtaaggt 28910232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 393 - 425
Target Start/End: Complemental strand, 31374864 - 31374832
Alignment:
Q  393 ctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||| ||||||||||||||||||||||||    
T  31374864 ctaactcatccttacaaaaccggcttgtaaggt 31374832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 393 - 425
Target Start/End: Original strand, 37272050 - 37272082
Alignment:
Q  393 ctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||| ||||||||||||||||||||||||    
T  37272050 ctaactcatccttacaaaaccggcttgtaaggt 37272082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 389 - 425
Target Start/End: Original strand, 40703412 - 40703448
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||||||| ||||||||||||||||||| ||||    
T  40703412 gggcctaactcatccttacaaaaccggcttgtgaggt 40703448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 389 - 425
Target Start/End: Original strand, 40703653 - 40703689
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||||||| ||||||||||||||||||| ||||    
T  40703653 gggcctaactcatccttacaaaaccggcttgtgaggt 40703689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 389 - 425
Target Start/End: Complemental strand, 41489994 - 41489958
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    ||||||| |||| ||||||||||||||||||||||||    
T  41489994 gggcctagctcatccttacaaaaccggcttgtaaggt 41489958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 389 - 425
Target Start/End: Complemental strand, 43288635 - 43288599
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||||| | ||||||||||||||||||||||||    
T  43288635 gggcctaactaatccttacaaaaccggcttgtaaggt 43288599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 393 - 425
Target Start/End: Original strand, 13637 - 13669
Alignment:
Q  393 ctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||||||||||||||||||||||||||||    
T  13637 ctaactcaaccttacaaaaccggcttgtaaggt 13669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 389 - 425
Target Start/End: Complemental strand, 20643 - 20607
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||||||| |||||||||||| |||||||||||    
T  20643 gggcctaactcatccttacaaaaccagcttgtaaggt 20607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0729 (Bit Score: 32; Significance: 0.00000001; HSPs: 2)
Name: scaffold0729
Description:

Target: scaffold0729; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 390 - 425
Target Start/End: Original strand, 2752 - 2787
Alignment:
Q  390 ggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    ||||||||||||||||||||||||||||||| ||||    
T  2752 ggcctaactcaaccttacaaaaccggcttgtgaggt 2787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0729; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 393 - 425
Target Start/End: Complemental strand, 2575 - 2543
Alignment:
Q  393 ctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||||||||||||||||||||||| ||||    
T  2575 ctaactcaaccttacaaaaccggcttgtgaggt 2543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1138 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold1138
Description:

Target: scaffold1138; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 389 - 425
Target Start/End: Original strand, 2080 - 2116
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||||||| ||||||||||| ||||||||||||    
T  2080 gggcctaactcatccttacaaaactggcttgtaaggt 2116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0434 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0434
Description:

Target: scaffold0434; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 389 - 425
Target Start/End: Complemental strand, 13409 - 13373
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||||||| ||| ||||||||||||||||||||    
T  13409 gggcctaactcatcctcacaaaaccggcttgtaaggt 13373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0419 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0419
Description:

Target: scaffold0419; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 393 - 425
Target Start/End: Original strand, 4244 - 4276
Alignment:
Q  393 ctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||| ||||||||||||||||||||||||    
T  4244 ctaactcatccttacaaaaccggcttgtaaggt 4276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 389 - 425
Target Start/End: Complemental strand, 76955 - 76919
Alignment:
Q  389 gggcctaactcaaccttacaaaaccggcttgtaaggt 425  Q
    |||||||||||| | ||||||||||||||||||||||    
T  76955 gggcctaactcatctttacaaaaccggcttgtaaggt 76919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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